Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264520 | XP_013465418.1 | 96.646 | 656 | 21 | 1 | 1 | 655 | 1 | 656 | 0.0 | 1316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264520 | sp|O80933|SCL9_ARATH | 43.256 | 645 | 319 | 13 | 50 | 654 | 77 | 714 | 3.96e-164 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264520 | A0A072VDE5 | 96.646 | 656 | 21 | 1 | 1 | 655 | 1 | 656 | 0.0 | 1316 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0264520 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037280 | Msa0264520 | 0.809590 | 1.755087e-50 | -8.615850e-47 |
| Msa0042520 | Msa0264520 | -0.810324 | 1.219780e-50 | -8.615850e-47 |
| Msa0052780 | Msa0264520 | 0.833248 | 5.947187e-56 | -8.615850e-47 |
| Msa0090380 | Msa0264520 | 0.835041 | 2.114042e-56 | -8.615850e-47 |
| Msa0097570 | Msa0264520 | 0.834195 | 3.448363e-56 | -8.615850e-47 |
| Msa0104810 | Msa0264520 | 0.825643 | 4.192301e-54 | -8.615850e-47 |
| Msa0137860 | Msa0264520 | 0.834616 | 2.703711e-56 | -8.615850e-47 |
| Msa0143640 | Msa0264520 | 0.808697 | 2.726943e-50 | -8.615850e-47 |
| Msa0150620 | Msa0264520 | 0.801862 | 7.370140e-49 | -8.615850e-47 |
| Msa0178000 | Msa0264520 | 0.813434 | 2.564717e-51 | -8.615850e-47 |
| Msa0203090 | Msa0264520 | 0.800628 | 1.318087e-48 | -8.615850e-47 |
| Msa0204140 | Msa0264520 | 0.845091 | 5.041927e-59 | -8.615850e-47 |
| Msa0223130 | Msa0264520 | 0.804532 | 2.064676e-49 | -8.615850e-47 |
| Msa0223140 | Msa0264520 | 0.806273 | 8.911411e-50 | -8.615850e-47 |
| Msa0245400 | Msa0264520 | 0.806374 | 8.487453e-50 | -8.615850e-47 |
| Msa0246140 | Msa0264520 | 0.806165 | 9.392897e-50 | -8.615850e-47 |
| Msa0264500 | Msa0264520 | 0.839771 | 1.298109e-57 | -8.615850e-47 |
| Msa0264520 | Msa0285890 | 0.818344 | 2.058325e-52 | -8.615850e-47 |
| Msa0264520 | Msa0293720 | 0.805405 | 1.356034e-49 | -8.615850e-47 |
| Msa0264520 | Msa0302510 | 0.819041 | 1.430457e-52 | -8.615850e-47 |
| Msa0264520 | Msa0306310 | 0.803471 | 3.431625e-49 | -8.615850e-47 |
| Msa0264520 | Msa0319680 | 0.825541 | 4.430524e-54 | -8.615850e-47 |
| Msa0264520 | Msa0320170 | 0.810004 | 1.430071e-50 | -8.615850e-47 |
| Msa0264520 | Msa0320230 | 0.805751 | 1.147682e-49 | -8.615850e-47 |
| Msa0264520 | Msa0324810 | 0.813299 | 2.746352e-51 | -8.615850e-47 |
| Msa0264520 | Msa0339720 | 0.809804 | 1.578614e-50 | -8.615850e-47 |
| Msa0264520 | Msa0345050 | 0.817534 | 3.136880e-52 | -8.615850e-47 |
| Msa0264520 | Msa0345890 | 0.821482 | 3.945059e-53 | -8.615850e-47 |
| Msa0264520 | Msa0345980 | 0.826796 | 2.228725e-54 | -8.615850e-47 |
| Msa0264520 | Msa0393100 | 0.842666 | 2.250026e-58 | -8.615850e-47 |
| Msa0264520 | Msa0402800 | 0.845181 | 4.766545e-59 | -8.615850e-47 |
| Msa0264520 | Msa0405200 | 0.807849 | 4.134477e-50 | -8.615850e-47 |
| Msa0264520 | Msa0434400 | 0.803148 | 4.003062e-49 | -8.615850e-47 |
| Msa0264520 | Msa0480540 | 0.804405 | 2.194556e-49 | -8.615850e-47 |
| Msa0264520 | Msa0488580 | 0.834362 | 3.132492e-56 | -8.615850e-47 |
| Msa0264520 | Msa0490320 | 0.837443 | 5.183182e-57 | -8.615850e-47 |
| Msa0264520 | Msa0493870 | 0.800243 | 1.579262e-48 | -8.615850e-47 |
| Msa0264520 | Msa0497860 | 0.855786 | 4.992458e-62 | -8.615850e-47 |
| Msa0264520 | Msa0522140 | 0.801216 | 9.996054e-49 | -8.615850e-47 |
| Msa0264520 | Msa0531050 | 0.823232 | 1.547495e-53 | -8.615850e-47 |
| Msa0264520 | Msa0534610 | 0.832675 | 8.254946e-56 | -8.615850e-47 |
| Msa0264520 | Msa0556270 | 0.830749 | 2.464173e-55 | -8.615850e-47 |
| Msa0264520 | Msa0557240 | 0.808813 | 2.575620e-50 | -8.615850e-47 |
| Msa0264520 | Msa0565180 | 0.817152 | 3.823665e-52 | -8.615850e-47 |
| Msa0264520 | Msa0580840 | 0.806330 | 8.667837e-50 | -8.615850e-47 |
| Msa0264520 | Msa0584580 | 0.818608 | 1.794033e-52 | -8.615850e-47 |
| Msa0264520 | Msa0584600 | 0.818444 | 1.953823e-52 | -8.615850e-47 |
| Msa0264520 | Msa0590810 | 0.829041 | 6.426250e-55 | -8.615850e-47 |
| Msa0264520 | Msa0597180 | 0.829343 | 5.429467e-55 | -8.615850e-47 |
| Msa0264520 | Msa0611060 | 0.816459 | 5.470798e-52 | -8.615850e-47 |
| Msa0264520 | Msa0615200 | 0.810956 | 8.905799e-51 | -8.615850e-47 |
| Msa0264520 | Msa0631130 | 0.807221 | 5.620115e-50 | -8.615850e-47 |
| Msa0264520 | Msa0645480 | 0.836385 | 9.651141e-57 | -8.615850e-47 |
| Msa0264520 | Msa0650560 | 0.802204 | 6.269678e-49 | -8.615850e-47 |
| Msa0264520 | Msa0657340 | 0.829369 | 5.349370e-55 | -8.615850e-47 |
| Msa0264520 | Msa0669350 | 0.815253 | 1.016537e-51 | -8.615850e-47 |
| Msa0264520 | Msa0690100 | -0.801059 | 1.076701e-48 | -8.615850e-47 |
| Msa0264520 | Msa0693750 | 0.808174 | 3.525022e-50 | -8.615850e-47 |
| Msa0264520 | Msa0701430 | 0.814144 | 1.789301e-51 | -8.615850e-47 |
| Msa0264520 | Msa0713060 | 0.801579 | 8.425963e-49 | -8.615850e-47 |
| Msa0264520 | Msa0744640 | 0.827101 | 1.884253e-54 | -8.615850e-47 |
| Msa0264520 | Msa0781210 | 0.802930 | 4.439962e-49 | -8.615850e-47 |
| Msa0264520 | Msa0810330 | 0.800194 | 1.615956e-48 | -8.615850e-47 |
| Msa0264520 | Msa0816630 | 0.824590 | 7.432901e-54 | -8.615850e-47 |
| Msa0264520 | Msa0841730 | 0.826560 | 2.537322e-54 | -8.615850e-47 |
| Msa0264520 | Msa0863940 | 0.815364 | 9.602728e-52 | -8.615850e-47 |
| Msa0264520 | Msa0863990 | 0.802184 | 6.326912e-49 | -8.615850e-47 |
| Msa0264520 | Msa0870510 | 0.813728 | 2.209438e-51 | -8.615850e-47 |
| Msa0264520 | Msa0873910 | 0.815173 | 1.058938e-51 | -8.615850e-47 |
| Msa0264520 | Msa0901270 | 0.814072 | 1.855594e-51 | -8.615850e-47 |
| Msa0264520 | Msa0905570 | 0.840376 | 9.026677e-58 | -8.615850e-47 |
| Msa0264520 | Msa0945130 | 0.832043 | 1.183838e-55 | -8.615850e-47 |
| Msa0264520 | Msa0975960 | 0.819669 | 1.028929e-52 | -8.615850e-47 |
| Msa0264520 | Msa1001120 | 0.827935 | 1.188765e-54 | -8.615850e-47 |
| Msa0264520 | Msa1016960 | 0.813887 | 2.038281e-51 | -8.615850e-47 |
| Msa0264520 | Msa1025750 | 0.805818 | 1.110930e-49 | -8.615850e-47 |
| Msa0264520 | Msa1026890 | 0.802193 | 6.301129e-49 | -8.615850e-47 |
| Msa0264520 | Msa1030210 | 0.816165 | 6.363974e-52 | -8.615850e-47 |
| Msa0264520 | Msa1031780 | 0.810691 | 1.016511e-50 | -8.615850e-47 |
| Msa0264520 | Msa1035050 | 0.817243 | 3.647385e-52 | -8.615850e-47 |
| Msa0264520 | Msa1058200 | 0.811096 | 8.306592e-51 | -8.615850e-47 |
| Msa0264520 | Msa1069250 | 0.818819 | 1.606630e-52 | -8.615850e-47 |
| Msa0264520 | Msa1075090 | 0.835296 | 1.822834e-56 | -8.615850e-47 |
| Msa0264520 | Msa1077970 | 0.810220 | 1.284189e-50 | -8.615850e-47 |
| Msa0264520 | Msa1084890 | 0.804042 | 2.611696e-49 | -8.615850e-47 |
| Msa0264520 | Msa1086490 | -0.806389 | 8.422191e-50 | -8.615850e-47 |
| Msa0264520 | Msa1095590 | 0.805444 | 1.330942e-49 | -8.615850e-47 |
| Msa0264520 | Msa1111860 | 0.814950 | 1.186308e-51 | -8.615850e-47 |
| Msa0264520 | Msa1114670 | 0.803517 | 3.357566e-49 | -8.615850e-47 |
| Msa0264520 | Msa1115980 | 0.813873 | 2.053528e-51 | -8.615850e-47 |
| Msa0264520 | Msa1131790 | 0.830045 | 3.663987e-55 | -8.615850e-47 |
| Msa0264520 | Msa1136760 | 0.812229 | 4.709108e-51 | -8.615850e-47 |
| Msa0264520 | Msa1143260 | 0.807393 | 5.166376e-50 | -8.615850e-47 |
| Msa0264520 | Msa1157110 | 0.817674 | 2.918045e-52 | -8.615850e-47 |
| Msa0264520 | Msa1159170 | 0.809744 | 1.626430e-50 | -8.615850e-47 |
| Msa0264520 | Msa1167310 | 0.809992 | 1.438445e-50 | -8.615850e-47 |
| Msa0264520 | Msa1173150 | 0.830671 | 2.575354e-55 | -8.615850e-47 |
| Msa0264520 | Msa1174280 | 0.833709 | 4.564132e-56 | -8.615850e-47 |
| Msa0264520 | Msa1185270 | 0.808973 | 2.379925e-50 | -8.615850e-47 |
| Msa0264520 | Msa1187490 | 0.831980 | 1.227357e-55 | -8.615850e-47 |
| Msa0264520 | Msa1202110 | 0.833750 | 4.457283e-56 | -8.615850e-47 |
| Msa0264520 | Msa1211610 | 0.821385 | 4.153538e-53 | -8.615850e-47 |
| Msa0264520 | Msa1215740 | 0.800842 | 1.192013e-48 | -8.615850e-47 |
| Msa0264520 | Msa1218160 | 0.833953 | 3.964987e-56 | -8.615850e-47 |
| Msa0264520 | Msa1241740 | 0.816212 | 6.211275e-52 | -8.615850e-47 |
| Msa0264520 | Msa1254870 | 0.829372 | 5.341121e-55 | -8.615850e-47 |
| Msa0264520 | Msa1262540 | 0.812607 | 3.893519e-51 | -8.615850e-47 |
| Msa0264520 | Msa1269200 | 0.803611 | 3.209387e-49 | -8.615850e-47 |
| Msa0264520 | Msa1299480 | 0.819189 | 1.323716e-52 | -8.615850e-47 |
| Msa0264520 | Msa1328430 | 0.829992 | 3.772913e-55 | -8.615850e-47 |
| Msa0264520 | Msa1332420 | 0.801055 | 1.078626e-48 | -8.615850e-47 |
| Msa0264520 | Msa1362850 | 0.832060 | 1.172171e-55 | -8.615850e-47 |
| Msa0264520 | Msa1367800 | 0.818366 | 2.035539e-52 | -8.615850e-47 |
| Msa0264520 | Msa1369320 | 0.824339 | 8.517812e-54 | -8.615850e-47 |
| Msa0264520 | Msa1395250 | 0.801956 | 7.047767e-49 | -8.615850e-47 |
| Msa0264520 | Msa1405530 | 0.829579 | 4.757521e-55 | -8.615850e-47 |
| Msa0264520 | Msa1411370 | 0.812394 | 4.334598e-51 | -8.615850e-47 |
| Msa0264520 | Msa1413800 | 0.831490 | 1.621112e-55 | -8.615850e-47 |
| Msa0264520 | Msa1415420 | 0.820214 | 7.718450e-53 | -8.615850e-47 |
| Msa0264520 | Msa1420940 | 0.812073 | 5.092645e-51 | -8.615850e-47 |
| Msa0264520 | Msa1433410 | 0.835873 | 1.302298e-56 | -8.615850e-47 |
| Msa0264520 | Msa1436090 | 0.829518 | 4.922768e-55 | -8.615850e-47 |
| Msa0264520 | Msa1439860 | 0.811972 | 5.356519e-51 | -8.615850e-47 |
| Msa0264520 | Msa1443620 | 0.839868 | 1.224564e-57 | -8.615850e-47 |
| Msa0264520 | Msa1459920 | 0.829583 | 4.746705e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264520 | MtrunA17_Chr2g0328431 | 96.646 | 656 | 21 | 1 | 1 | 655 | 1 | 656 | 0.0 | 1316 |
| Msa0264520 | MtrunA17_Chr2g0328411 | 92.202 | 654 | 50 | 1 | 1 | 653 | 1 | 654 | 0.0 | 1210 |
| Msa0264520 | MtrunA17_Chr2g0328401 | 79.560 | 636 | 128 | 2 | 1 | 634 | 1 | 636 | 0.0 | 1036 |
| Msa0264520 | MtrunA17_Chr4g0031741 | 53.468 | 692 | 245 | 14 | 1 | 655 | 1 | 652 | 0.0 | 665 |
| Msa0264520 | MtrunA17_Chr7g0238891 | 44.461 | 686 | 298 | 16 | 44 | 655 | 66 | 742 | 0.0 | 531 |
| Msa0264520 | MtrunA17_Chr4g0031701 | 45.714 | 630 | 309 | 13 | 38 | 655 | 20 | 628 | 1.02e-170 | 501 |
| Msa0264520 | MtrunA17_Chr4g0031711 | 44.065 | 674 | 304 | 20 | 38 | 655 | 79 | 735 | 2.51e-169 | 501 |
| Msa0264520 | MtrunA17_Chr4g0031721 | 53.305 | 469 | 199 | 7 | 200 | 655 | 225 | 686 | 6.44e-168 | 496 |
| Msa0264520 | MtrunA17_Chr4g0031721 | 43.662 | 71 | 38 | 1 | 29 | 99 | 13 | 81 | 9.95e-11 | 65.1 |
| Msa0264520 | MtrunA17_Chr4g0031731 | 45.397 | 630 | 311 | 13 | 38 | 655 | 20 | 628 | 3.28e-167 | 492 |
| Msa0264520 | MtrunA17_Chr2g0328391 | 51.410 | 461 | 216 | 5 | 202 | 655 | 212 | 671 | 4.07e-164 | 486 |
| Msa0264520 | MtrunA17_Chr2g0328381 | 46.420 | 433 | 218 | 6 | 229 | 655 | 219 | 643 | 3.80e-133 | 405 |
| Msa0264520 | MtrunA17_Chr2g0328341 | 46.882 | 433 | 215 | 7 | 229 | 655 | 217 | 640 | 5.04e-132 | 402 |
| Msa0264520 | MtrunA17_Chr2g0328361 | 47.090 | 378 | 167 | 6 | 283 | 655 | 268 | 617 | 1.15e-115 | 359 |
| Msa0264520 | MtrunA17_Chr2g0328371 | 51.172 | 256 | 120 | 2 | 356 | 610 | 1 | 252 | 1.30e-91 | 284 |
| Msa0264520 | MtrunA17_Chr2g0290241 | 30.214 | 374 | 255 | 5 | 284 | 652 | 52 | 424 | 1.46e-58 | 203 |
| Msa0264520 | MtrunA17_Chr5g0447691 | 33.422 | 374 | 240 | 8 | 285 | 652 | 173 | 543 | 1.59e-57 | 203 |
| Msa0264520 | MtrunA17_Chr2g0319091 | 32.225 | 391 | 258 | 6 | 267 | 652 | 190 | 578 | 4.95e-57 | 202 |
| Msa0264520 | MtrunA17_Chr4g0076091 | 29.095 | 409 | 273 | 7 | 259 | 653 | 138 | 543 | 1.51e-54 | 195 |
| Msa0264520 | MtrunA17_Chr1g0159461 | 28.804 | 368 | 257 | 4 | 289 | 652 | 225 | 591 | 6.41e-52 | 189 |
| Msa0264520 | MtrunA17_Chr7g0224271 | 30.730 | 397 | 232 | 9 | 282 | 652 | 293 | 672 | 1.67e-51 | 189 |
| Msa0264520 | MtrunA17_Chr3g0101141 | 29.570 | 372 | 257 | 4 | 285 | 652 | 171 | 541 | 2.52e-50 | 183 |
| Msa0264520 | MtrunA17_Chr5g0445331 | 30.239 | 377 | 252 | 7 | 285 | 652 | 157 | 531 | 4.23e-50 | 182 |
| Msa0264520 | MtrunA17_Chr8g0376381 | 31.467 | 375 | 236 | 9 | 283 | 652 | 163 | 521 | 4.78e-49 | 179 |
| Msa0264520 | MtrunA17_Chr3g0125811 | 28.261 | 368 | 259 | 4 | 289 | 652 | 203 | 569 | 2.45e-48 | 178 |
| Msa0264520 | MtrunA17_Chr8g0357601 | 29.923 | 391 | 244 | 7 | 283 | 655 | 176 | 554 | 8.53e-48 | 177 |
| Msa0264520 | MtrunA17_Chr4g0057891 | 29.923 | 391 | 243 | 9 | 281 | 652 | 141 | 519 | 7.39e-47 | 173 |
| Msa0264520 | MtrunA17_Chr3g0110971 | 29.381 | 388 | 242 | 9 | 283 | 652 | 213 | 586 | 2.67e-45 | 170 |
| Msa0264520 | MtrunA17_Chr2g0306641 | 30.227 | 397 | 252 | 12 | 269 | 652 | 102 | 486 | 4.09e-45 | 168 |
| Msa0264520 | MtrunA17_Chr7g0245601 | 29.973 | 367 | 239 | 8 | 292 | 654 | 441 | 793 | 2.67e-43 | 167 |
| Msa0264520 | MtrunA17_Chr3g0085681 | 27.404 | 416 | 243 | 6 | 290 | 652 | 26 | 435 | 1.49e-41 | 156 |
| Msa0264520 | MtrunA17_Chr4g0038851 | 26.698 | 427 | 244 | 7 | 289 | 652 | 48 | 468 | 1.97e-40 | 154 |
| Msa0264520 | MtrunA17_Chr4g0038761 | 28.912 | 377 | 236 | 10 | 292 | 655 | 87 | 444 | 2.92e-39 | 150 |
| Msa0264520 | MtrunA17_Chr2g0294461 | 28.278 | 389 | 250 | 7 | 284 | 652 | 205 | 584 | 2.71e-38 | 150 |
| Msa0264520 | MtrunA17_Chr4g0057291 | 24.485 | 388 | 267 | 10 | 283 | 654 | 286 | 663 | 4.70e-35 | 141 |
| Msa0264520 | MtrunA17_Chr2g0294471 | 27.013 | 385 | 257 | 8 | 284 | 652 | 199 | 575 | 1.76e-32 | 132 |
| Msa0264520 | MtrunA17_Chr4g0039661 | 25.729 | 377 | 258 | 7 | 286 | 652 | 190 | 554 | 5.95e-32 | 130 |
| Msa0264520 | MtrunA17_Chr1g0183641 | 26.772 | 381 | 247 | 13 | 283 | 652 | 117 | 476 | 1.18e-30 | 125 |
| Msa0264520 | MtrunA17_Chr7g0270031 | 26.649 | 379 | 259 | 8 | 284 | 652 | 184 | 553 | 2.48e-30 | 125 |
| Msa0264520 | MtrunA17_Chr5g0401131 | 25.521 | 384 | 262 | 9 | 289 | 654 | 114 | 491 | 3.93e-30 | 124 |
| Msa0264520 | MtrunA17_Chr1g0200401 | 26.263 | 396 | 246 | 12 | 289 | 652 | 77 | 458 | 6.19e-30 | 123 |
| Msa0264520 | MtrunA17_Chr5g0424131 | 26.944 | 360 | 230 | 12 | 316 | 653 | 151 | 499 | 2.60e-27 | 116 |
| Msa0264520 | MtrunA17_Chr7g0236851 | 29.520 | 271 | 181 | 5 | 383 | 652 | 395 | 656 | 1.36e-26 | 115 |
| Msa0264520 | MtrunA17_Chr3g0114841 | 27.688 | 372 | 225 | 14 | 308 | 652 | 145 | 499 | 7.21e-26 | 112 |
| Msa0264520 | MtrunA17_Chr8g0383981 | 24.603 | 378 | 246 | 15 | 294 | 655 | 144 | 498 | 1.05e-25 | 111 |
| Msa0264520 | MtrunA17_Chr3g0085361 | 25.429 | 350 | 205 | 5 | 352 | 652 | 7 | 349 | 3.03e-25 | 107 |
| Msa0264520 | MtrunA17_Chr5g0396491 | 32.057 | 209 | 132 | 2 | 289 | 493 | 56 | 258 | 3.72e-25 | 109 |
| Msa0264520 | MtrunA17_Chr5g0396491 | 30.201 | 149 | 103 | 1 | 505 | 652 | 329 | 477 | 1.71e-16 | 82.8 |
| Msa0264520 | MtrunA17_Chr5g0401421 | 22.066 | 426 | 279 | 9 | 279 | 655 | 27 | 448 | 3.54e-24 | 106 |
| Msa0264520 | MtrunA17_Chr6g0468561 | 26.377 | 345 | 224 | 10 | 324 | 652 | 331 | 661 | 1.62e-23 | 105 |
| Msa0264520 | MtrunA17_Chr1g0194621 | 22.841 | 359 | 249 | 8 | 311 | 652 | 170 | 517 | 3.46e-23 | 103 |
| Msa0264520 | MtrunA17_Chr4g0053901 | 21.928 | 415 | 273 | 7 | 289 | 655 | 59 | 470 | 2.90e-22 | 100 |
| Msa0264520 | MtrunA17_Chr2g0329591 | 26.000 | 400 | 241 | 12 | 289 | 654 | 74 | 452 | 1.98e-21 | 97.8 |
| Msa0264520 | MtrunA17_Chr7g0230731 | 24.129 | 373 | 255 | 11 | 290 | 652 | 373 | 727 | 9.21e-18 | 87.4 |
| Msa0264520 | MtrunA17_Chr7g0230771 | 23.450 | 371 | 260 | 10 | 290 | 652 | 376 | 730 | 2.45e-17 | 86.3 |
| Msa0264520 | MtrunA17_Chr4g0012071 | 21.883 | 393 | 272 | 12 | 275 | 652 | 178 | 550 | 4.94e-16 | 81.6 |
| Msa0264520 | MtrunA17_Chr8g0344101 | 24.500 | 400 | 243 | 16 | 289 | 652 | 223 | 599 | 1.54e-15 | 80.1 |
| Msa0264520 | MtrunA17_Chr2g0323111 | 25.843 | 178 | 130 | 2 | 479 | 655 | 132 | 308 | 2.76e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264520 | AT2G37650.1 | 43.256 | 645 | 319 | 13 | 50 | 654 | 77 | 714 | 4.03e-165 | 490 |
| Msa0264520 | AT2G37650.2 | 43.256 | 645 | 319 | 13 | 50 | 654 | 65 | 702 | 4.16e-165 | 490 |
| Msa0264520 | AT2G29060.2 | 44.013 | 618 | 316 | 10 | 50 | 654 | 56 | 656 | 1.08e-164 | 487 |
| Msa0264520 | AT2G29060.1 | 42.746 | 641 | 328 | 12 | 50 | 654 | 56 | 693 | 4.21e-162 | 482 |
| Msa0264520 | AT5G59450.1 | 49.474 | 475 | 222 | 8 | 193 | 655 | 132 | 600 | 9.26e-157 | 465 |
| Msa0264520 | AT1G07530.1 | 50.000 | 468 | 218 | 6 | 201 | 655 | 303 | 767 | 9.71e-156 | 468 |
| Msa0264520 | AT3G46600.3 | 51.002 | 449 | 196 | 6 | 216 | 655 | 116 | 549 | 2.80e-149 | 444 |
| Msa0264520 | AT3G46600.1 | 51.002 | 449 | 196 | 6 | 216 | 655 | 148 | 581 | 4.73e-149 | 444 |
| Msa0264520 | AT3G46600.2 | 55.946 | 370 | 160 | 2 | 289 | 655 | 4 | 373 | 6.42e-147 | 431 |
| Msa0264520 | AT2G29065.1 | 41.868 | 621 | 321 | 12 | 51 | 655 | 34 | 630 | 1.87e-144 | 434 |
| Msa0264520 | AT1G07520.2 | 44.813 | 482 | 247 | 6 | 185 | 655 | 58 | 531 | 1.20e-136 | 410 |
| Msa0264520 | AT1G07520.4 | 44.813 | 482 | 247 | 6 | 185 | 655 | 58 | 531 | 1.20e-136 | 410 |
| Msa0264520 | AT1G07520.1 | 38.820 | 644 | 339 | 14 | 52 | 655 | 67 | 695 | 1.66e-136 | 416 |
| Msa0264520 | AT1G07520.3 | 38.820 | 644 | 339 | 14 | 52 | 655 | 68 | 696 | 1.93e-136 | 416 |
| Msa0264520 | AT1G50600.3 | 34.584 | 373 | 237 | 5 | 285 | 652 | 155 | 525 | 2.59e-61 | 213 |
| Msa0264520 | AT1G50600.1 | 34.584 | 373 | 237 | 5 | 285 | 652 | 226 | 596 | 1.37e-60 | 213 |
| Msa0264520 | AT1G50600.2 | 34.584 | 373 | 237 | 5 | 285 | 652 | 230 | 600 | 1.61e-60 | 213 |
| Msa0264520 | AT5G48150.1 | 31.854 | 383 | 253 | 6 | 276 | 652 | 109 | 489 | 2.27e-56 | 199 |
| Msa0264520 | AT5G48150.4 | 31.854 | 383 | 253 | 6 | 276 | 652 | 109 | 489 | 2.27e-56 | 199 |
| Msa0264520 | AT5G48150.2 | 31.854 | 383 | 253 | 6 | 276 | 652 | 109 | 489 | 2.27e-56 | 199 |
| Msa0264520 | AT5G48150.3 | 31.854 | 383 | 253 | 6 | 276 | 652 | 109 | 489 | 2.27e-56 | 199 |
| Msa0264520 | AT2G04890.1 | 30.108 | 372 | 248 | 5 | 285 | 652 | 49 | 412 | 5.43e-52 | 185 |
| Msa0264520 | AT4G17230.1 | 30.400 | 375 | 256 | 4 | 284 | 654 | 153 | 526 | 3.42e-49 | 180 |
| Msa0264520 | AT4G17230.2 | 30.400 | 375 | 256 | 4 | 284 | 654 | 153 | 526 | 3.42e-49 | 180 |
| Msa0264520 | AT1G14920.1 | 30.667 | 375 | 243 | 9 | 283 | 652 | 166 | 528 | 1.24e-46 | 173 |
| Msa0264520 | AT1G21450.1 | 28.726 | 369 | 257 | 5 | 289 | 652 | 225 | 592 | 5.55e-46 | 172 |
| Msa0264520 | AT3G54220.1 | 30.376 | 372 | 234 | 8 | 292 | 654 | 296 | 651 | 2.52e-45 | 171 |
| Msa0264520 | AT3G03450.1 | 29.563 | 389 | 234 | 9 | 283 | 652 | 177 | 544 | 2.48e-44 | 167 |
| Msa0264520 | AT2G01570.1 | 28.800 | 375 | 250 | 9 | 283 | 652 | 218 | 580 | 5.41e-43 | 164 |
| Msa0264520 | AT1G66350.1 | 30.159 | 378 | 235 | 10 | 283 | 652 | 149 | 505 | 1.58e-42 | 161 |
| Msa0264520 | AT5G66770.1 | 28.686 | 373 | 254 | 7 | 286 | 652 | 217 | 583 | 8.91e-42 | 160 |
| Msa0264520 | AT5G17490.1 | 29.365 | 378 | 243 | 9 | 283 | 652 | 154 | 515 | 4.04e-40 | 154 |
| Msa0264520 | AT5G41920.1 | 27.979 | 386 | 247 | 9 | 279 | 652 | 33 | 399 | 5.64e-38 | 146 |
| Msa0264520 | AT3G50650.1 | 26.400 | 375 | 258 | 7 | 290 | 652 | 173 | 541 | 5.21e-37 | 145 |
| Msa0264520 | AT4G37650.1 | 24.814 | 403 | 250 | 11 | 288 | 654 | 145 | 530 | 7.98e-34 | 136 |
| Msa0264520 | AT1G63100.1 | 25.926 | 351 | 243 | 6 | 285 | 627 | 248 | 589 | 2.31e-33 | 136 |
| Msa0264520 | AT1G63100.2 | 25.926 | 351 | 243 | 6 | 285 | 627 | 273 | 614 | 2.36e-33 | 136 |
| Msa0264520 | AT5G52510.1 | 26.260 | 377 | 254 | 8 | 292 | 652 | 271 | 639 | 1.19e-31 | 131 |
| Msa0264520 | AT3G49950.1 | 27.273 | 385 | 256 | 10 | 289 | 654 | 30 | 409 | 1.79e-30 | 124 |
| Msa0264520 | AT4G08250.1 | 28.375 | 363 | 234 | 12 | 305 | 652 | 125 | 476 | 6.15e-30 | 124 |
| Msa0264520 | AT1G50420.1 | 29.204 | 226 | 145 | 4 | 286 | 502 | 54 | 273 | 6.19e-24 | 106 |
| Msa0264520 | AT1G50420.1 | 29.530 | 149 | 104 | 1 | 505 | 652 | 330 | 478 | 5.43e-15 | 78.6 |
| Msa0264520 | AT1G55580.1 | 23.256 | 387 | 230 | 9 | 318 | 652 | 73 | 444 | 1.67e-21 | 98.2 |
| Msa0264520 | AT3G13840.1 | 24.093 | 386 | 247 | 13 | 289 | 652 | 148 | 509 | 5.71e-20 | 94.4 |
| Msa0264520 | AT4G00150.1 | 22.251 | 382 | 261 | 10 | 280 | 652 | 199 | 553 | 3.87e-12 | 69.7 |
| Msa0264520 | AT5G67411.1 | 30.198 | 202 | 124 | 9 | 402 | 590 | 1 | 198 | 3.64e-11 | 63.5 |
Find 136 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAAGTTCCGTTGTGAAAA+TGG | 0.182219 | 2_2:-64447299 | None:intergenic |
| CTCACAAGCTATAACATTTA+TGG | 0.192701 | 2_2:-64448501 | None:intergenic |
| CATCGACTACAAAATCTTTA+TGG | 0.219672 | 2_2:-64448652 | None:intergenic |
| CCATCTTCACCTTCTTCTTC+TGG | 0.264392 | 2_2:+64446868 | Msa0264520:CDS |
| AGCGTTCATGTTATTGATTT+TGG | 0.271020 | 2_2:+64447948 | Msa0264520:CDS |
| CCTGACCTGCCACTGCTTGT+AGG | 0.274499 | 2_2:-64448552 | None:intergenic |
| CCTCCAAAGCTTCGAATTAC+AGG | 0.281535 | 2_2:+64448032 | Msa0264520:CDS |
| TATGTATCTTAGGATGTTAT+TGG | 0.287625 | 2_2:-64446932 | None:intergenic |
| GTTACTTGGTTTACTGAGTT+TGG | 0.288731 | 2_2:-64446820 | None:intergenic |
| AGGCAACACTCTTCGCCTTT+TGG | 0.309946 | 2_2:+64447717 | Msa0264520:CDS |
| ACTCCATGGAAGAAGACTTT+TGG | 0.314241 | 2_2:-64448326 | None:intergenic |
| GGATGTCATTTATGTATCTT+AGG | 0.317485 | 2_2:-64446942 | None:intergenic |
| ACAACTTCATTGCACAGAAA+TGG | 0.347339 | 2_2:+64448156 | Msa0264520:CDS |
| TTTGAATGCTTTATCAGCTT+GGG | 0.351490 | 2_2:+64448715 | Msa0264520:CDS |
| AAGTCCTTCTACGATGTTCT+TGG | 0.359023 | 2_2:+64447039 | Msa0264520:CDS |
| GCAGGAATGTTTAAGACTTC+AGG | 0.359559 | 2_2:+64447008 | Msa0264520:CDS |
| ATTCCTGTAATTCGAAGCTT+TGG | 0.359837 | 2_2:-64448035 | None:intergenic |
| GCATCACATAATGTTGATTC+AGG | 0.366614 | 2_2:+64447543 | Msa0264520:CDS |
| TTAGCTCATTACTTTGCTAA+TGG | 0.370579 | 2_2:+64447756 | Msa0264520:CDS |
| TAAAGGACTTTGTAGTTGTA+TGG | 0.371367 | 2_2:-64447211 | None:intergenic |
| CATTTGGTGAAGGCTGGTTA+TGG | 0.381462 | 2_2:-64447062 | None:intergenic |
| AAATCTTGCAGAAAAGTGTT+TGG | 0.386250 | 2_2:-64446790 | None:intergenic |
| TCTTCTGGCACAAGCTCAAA+TGG | 0.386431 | 2_2:+64446883 | Msa0264520:CDS |
| AGCTTCAACACAGCTTCTCT+TGG | 0.390505 | 2_2:-64448287 | None:intergenic |
| CCTCTTGATGTGGCAACTGC+TGG | 0.394427 | 2_2:+64447819 | Msa0264520:CDS |
| AAGCTGTGTTGAAGCTGATC+AGG | 0.396558 | 2_2:+64448294 | Msa0264520:CDS |
| TCAGTAAACCAAGTAACAAA+TGG | 0.401437 | 2_2:+64446826 | Msa0264520:CDS |
| CCTTGTGTCTCGATGACAAC+TGG | 0.405616 | 2_2:-64447270 | None:intergenic |
| ATTCAAACCCATTTGTTACT+TGG | 0.405951 | 2_2:-64446834 | None:intergenic |
| CCTACAAGCAGTGGCAGGTC+AGG | 0.408410 | 2_2:+64448552 | Msa0264520:CDS |
| GAGCTGGGTTCAAGCAAATC+AGG | 0.413441 | 2_2:+64448582 | Msa0264520:CDS |
| ATGCTTGAGAGAGGGTTGTT+TGG | 0.418474 | 2_2:+64448470 | Msa0264520:CDS |
| GTTTCCTCCACCCTTTCTGC+AGG | 0.420825 | 2_2:-64448083 | None:intergenic |
| CAACATTATGTGATGCTTGT+TGG | 0.426130 | 2_2:-64447536 | None:intergenic |
| CAACTTCATTGCACAGAAAT+GGG | 0.427023 | 2_2:+64448157 | Msa0264520:CDS |
| TGCCACTGCTTGTAGGTCTC+AGG | 0.429715 | 2_2:-64448545 | None:intergenic |
| ATCGTTGTTTGATATGTTTG+AGG | 0.437931 | 2_2:+64448415 | Msa0264520:CDS |
| ATGTTATTGGAATATCTTGT+CGG | 0.439317 | 2_2:-64446919 | None:intergenic |
| TTCAATGCCACAGTTTCATC+AGG | 0.440053 | 2_2:-64448260 | None:intergenic |
| TTCTGACGAGGCATGGCCAC+TGG | 0.448222 | 2_2:-64447986 | None:intergenic |
| TCTGGGTCAGTGCTATCATT+TGG | 0.448392 | 2_2:-64447078 | None:intergenic |
| GCGCGATCGAAATTTCCATC+TGG | 0.453753 | 2_2:-64447096 | None:intergenic |
| TGCTATCATTTGGTGAAGGC+TGG | 0.460261 | 2_2:-64447068 | None:intergenic |
| GTGCTTCCTTAAACCGAGTT+GGG | 0.462869 | 2_2:-64448379 | None:intergenic |
| ATGCCGCGGCAGTGGATTTG+TGG | 0.465356 | 2_2:+64447619 | Msa0264520:CDS |
| CATGGATGAAGAAGATGACT+TGG | 0.465816 | 2_2:+64446966 | Msa0264520:CDS |
| GCAGAAAGGGTGGAGGAAAC+CGG | 0.469253 | 2_2:+64448086 | Msa0264520:CDS |
| AAGCTCAAATGGACAATCCT+TGG | 0.473031 | 2_2:+64446894 | Msa0264520:CDS |
| ATGGCCAAGAACATCGTAGA+AGG | 0.479055 | 2_2:-64447043 | None:intergenic |
| AGTACCTCATCTAAAATCTC+TGG | 0.483079 | 2_2:-64447480 | None:intergenic |
| AGCTTGTGAGGGTGCAGAAA+GGG | 0.483774 | 2_2:+64448514 | Msa0264520:CDS |
| TAGTCGATGTGGATGGTAAG+TGG | 0.492425 | 2_2:+64448666 | Msa0264520:CDS |
| GGAATTGAGCTTCCTCGGCC+AGG | 0.495711 | 2_2:+64448053 | Msa0264520:CDS |
| CGCTGGAGTCCATCACCAAA+AGG | 0.496232 | 2_2:-64447732 | None:intergenic |
| AAAACTTCTTCCACCGTCAC+TGG | 0.496341 | 2_2:-64447339 | None:intergenic |
| CGAAGCTTTGGAGGACCACC+AGG | 0.497005 | 2_2:-64448023 | None:intergenic |
| CCTGTAATTCGAAGCTTTGG+AGG | 0.497546 | 2_2:-64448032 | None:intergenic |
| AATCCAAAAGTCTTCTTCCA+TGG | 0.502095 | 2_2:+64448323 | Msa0264520:CDS |
| TAATGGTCTTGAGATAAGAT+TGG | 0.503318 | 2_2:+64447773 | Msa0264520:CDS |
| CTTTCTGCAGGTCTAAATCC+TGG | 0.504296 | 2_2:-64448071 | None:intergenic |
| GACAAACAATGCCGCGGCAG+TGG | 0.508260 | 2_2:+64447611 | Msa0264520:CDS |
| TTCTTCCATGGAGTTGCCAA+TGG | 0.510258 | 2_2:+64448335 | Msa0264520:CDS |
| ATGAGCTACTCAAACAGATT+AGG | 0.511922 | 2_2:+64447697 | Msa0264520:CDS |
| TCGAGGATCTAAAGATAGAC+AGG | 0.512446 | 2_2:+64448192 | Msa0264520:CDS |
| CTTTAGATCCTCGAGGCAGA+TGG | 0.512983 | 2_2:-64448183 | None:intergenic |
| CAGTAAACCAAGTAACAAAT+GGG | 0.514266 | 2_2:+64446827 | Msa0264520:CDS |
| TTCACAACGGAACTTGGAGT+TGG | 0.515437 | 2_2:+64447304 | Msa0264520:CDS |
| TTACAGGAATTGAGCTTCCT+CGG | 0.515630 | 2_2:+64448048 | Msa0264520:CDS |
| CAGGTCAGGAATAAGAGAGC+TGG | 0.517229 | 2_2:+64448566 | Msa0264520:CDS |
| CGCGATCGAAATTTCCATCT+GGG | 0.519839 | 2_2:-64447095 | None:intergenic |
| AGGATTTAGACCTGCAGAAA+GGG | 0.522516 | 2_2:+64448073 | Msa0264520:CDS |
| GGAATATCTTGTCGGTTCCA+AGG | 0.526658 | 2_2:-64446911 | None:intergenic |
| GAGCTTGTGCCAGAAGAAGA+AGG | 0.528577 | 2_2:-64446877 | None:intergenic |
| AAACATTCCTGCAGCATGCA+AGG | 0.535746 | 2_2:-64446997 | None:intergenic |
| CTGTGGCGAGCTACGATCAA+AGG | 0.536487 | 2_2:+64447667 | Msa0264520:CDS |
| AGTGCTTCCTTAAACCGAGT+TGG | 0.536839 | 2_2:-64448380 | None:intergenic |
| GTAGTTTGCTAGACGCCGTC+CGG | 0.538457 | 2_2:-64448105 | None:intergenic |
| CAGGATTTAGACCTGCAGAA+AGG | 0.540009 | 2_2:+64448072 | Msa0264520:CDS |
| AACTTCCATTGGCAACTCCA+TGG | 0.540581 | 2_2:-64448340 | None:intergenic |
| GCAATGAAGTTGTATTCAAA+TGG | 0.550757 | 2_2:-64448146 | None:intergenic |
| AGTCGATGTGGATGGTAAGT+GGG | 0.556259 | 2_2:+64448667 | Msa0264520:CDS |
| CGGTGCGCTATAACTTCCAT+TGG | 0.556645 | 2_2:-64448351 | None:intergenic |
| TAATGTTGATTCAGGAGGAA+AGG | 0.556753 | 2_2:+64447551 | Msa0264520:CDS |
| TTGTGCACATTGATTTAGCA+TGG | 0.558170 | 2_2:-64447643 | None:intergenic |
| CCAGAAGAAGAAGGTGAAGA+TGG | 0.558793 | 2_2:-64446868 | None:intergenic |
| ATGCCACAGTTTCATCAGGA+AGG | 0.560068 | 2_2:-64448256 | None:intergenic |
| CCAGCAGTTGCCACATCAAG+AGG | 0.562934 | 2_2:-64447819 | None:intergenic |
| TGAGACCTACAAGCAGTGGC+AGG | 0.569446 | 2_2:+64448547 | Msa0264520:CDS |
| TAACTCATATGAATCTAACT+TGG | 0.569816 | 2_2:+64447158 | Msa0264520:CDS |
| ATACATAAATGACATCCTCA+TGG | 0.570653 | 2_2:+64446948 | Msa0264520:CDS |
| CATAAATGTTATAGCTTGTG+AGG | 0.573605 | 2_2:+64448502 | Msa0264520:CDS |
| AGGTCAGGAATAAGAGAGCT+GGG | 0.580907 | 2_2:+64448567 | Msa0264520:CDS |
| ACATCAAGAGGCTGATATGA+TGG | 0.581066 | 2_2:-64447807 | None:intergenic |
| TGTAATGAACAAGAGGGAAG+AGG | 0.582616 | 2_2:+64447417 | Msa0264520:CDS |
| TATCAAACAACGATGAGAAG+TGG | 0.582630 | 2_2:-64448406 | None:intergenic |
| CACTCTCTGCAAAGGAGACG+CGG | 0.582762 | 2_2:-64447874 | None:intergenic |
| CAGAGATCGATGCTTGAGAG+AGG | 0.587984 | 2_2:+64448461 | Msa0264520:CDS |
| GATAGTCTTCTGACGAGGCA+TGG | 0.588033 | 2_2:-64447993 | None:intergenic |
| CAAAGTAATGAGCTAAACGC+TGG | 0.593615 | 2_2:-64447749 | None:intergenic |
| TGATACTTGTAATGAACAAG+AGG | 0.595387 | 2_2:+64447410 | Msa0264520:CDS |
| GAGGTACTGCTTTATCAGAA+AGG | 0.596446 | 2_2:+64447495 | Msa0264520:CDS |
| ATCATATCAGCCTCTTGATG+TGG | 0.597759 | 2_2:+64447809 | Msa0264520:CDS |
| GTATTTGTCACTCTCTGCAA+AGG | 0.601498 | 2_2:-64447882 | None:intergenic |
| ATTTAGACCTGCAGAAAGGG+TGG | 0.601556 | 2_2:+64448076 | Msa0264520:CDS |
| AGGGTGCAGAAAGGGTTGAA+AGG | 0.602354 | 2_2:+64448522 | Msa0264520:CDS |
| ACCTCATCTAAAATCTCTGG+TGG | 0.604084 | 2_2:-64447477 | None:intergenic |
| GCAGGTCTAAATCCTGGCCG+AGG | 0.605176 | 2_2:-64448065 | None:intergenic |
| TAGCTTGTGAGGGTGCAGAA+AGG | 0.607236 | 2_2:+64448513 | Msa0264520:CDS |
| AATGATAGCACTGACCCAGA+TGG | 0.609483 | 2_2:+64447081 | Msa0264520:CDS |
| AAGATTCGAATTCGACGACA+TGG | 0.612871 | 2_2:-64447185 | None:intergenic |
| CCAGTTGTCATCGAGACACA+AGG | 0.613282 | 2_2:+64447270 | Msa0264520:CDS |
| TGGGTTCAAGCAAATCAGGT+TGG | 0.613823 | 2_2:+64448586 | Msa0264520:CDS |
| ACAAGAGGGAAGAGGTAGCA+AGG | 0.614187 | 2_2:+64447425 | Msa0264520:CDS |
| TAGACCTGCAGAAAGGGTGG+AGG | 0.621359 | 2_2:+64448079 | Msa0264520:CDS |
| GGCCTGAGACCTACAAGCAG+TGG | 0.622095 | 2_2:+64448543 | Msa0264520:CDS |
| GATACTTGTAATGAACAAGA+GGG | 0.631778 | 2_2:+64447411 | Msa0264520:CDS |
| TCAGTGCTATCATTTGGTGA+AGG | 0.638613 | 2_2:-64447072 | None:intergenic |
| TGACATTCAGCCAGTGACGG+TGG | 0.640113 | 2_2:+64447329 | Msa0264520:CDS |
| TGAAACGAAAACAATCGTGA+AGG | 0.640625 | 2_2:+64448625 | Msa0264520:CDS |
| TCACATAATGTTGATTCAGG+AGG | 0.642164 | 2_2:+64447546 | Msa0264520:CDS |
| GGTCCACAAATCCACTGCCG+CGG | 0.645648 | 2_2:-64447622 | None:intergenic |
| GAATGACATTCAGCCAGTGA+CGG | 0.650343 | 2_2:+64447326 | Msa0264520:CDS |
| AGAGATCGATGCTTGAGAGA+GGG | 0.659674 | 2_2:+64448462 | Msa0264520:CDS |
| GAACCTTCCTGATGAAACTG+TGG | 0.660816 | 2_2:+64448253 | Msa0264520:CDS |
| AAATCAATGTGCACAAGCTG+TGG | 0.661819 | 2_2:+64447650 | Msa0264520:CDS |
| TGATTCAGGAGGAAAGGCAA+AGG | 0.662454 | 2_2:+64447557 | Msa0264520:CDS |
| TGTCTATCTTTAGATCCTCG+AGG | 0.677736 | 2_2:-64448190 | None:intergenic |
| AGACTATCATTAAGACCTGG+TGG | 0.687440 | 2_2:+64448008 | Msa0264520:CDS |
| AGTCATCTTCTTCATCCATG+AGG | 0.688746 | 2_2:-64446963 | None:intergenic |
| AAAGGGTGGAGGAAACCGGA+CGG | 0.693036 | 2_2:+64448090 | Msa0264520:CDS |
| AGAAGACTATCATTAAGACC+TGG | 0.694335 | 2_2:+64448005 | Msa0264520:CDS |
| ATAAATGTTATAGCTTGTGA+GGG | 0.694950 | 2_2:+64448503 | Msa0264520:CDS |
| ATGGGAAACCATCTGCCTCG+AGG | 0.700104 | 2_2:+64448175 | Msa0264520:CDS |
| ATCTACGACAAACAATGCCG+CGG | 0.702968 | 2_2:+64447605 | Msa0264520:CDS |
| GATCTCTGCATGTCTTCACG+AGG | 0.714627 | 2_2:-64448446 | None:intergenic |
| TTAATGATAGTCTTCTGACG+AGG | 0.733987 | 2_2:-64447998 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTATTTTTTTTCTATTAA+AGG | - | chr2_2:64447231-64447250 | None:intergenic | 10.0% |
| !!! | TAGTATTTTTTTTCTATTAA+AGG | - | chr2_2:64447231-64447250 | None:intergenic | 10.0% |
| !!! | ATTGATTTTGGAATTTTCTA+TGG | + | chr2_2:64447960-64447979 | Msa0264520:CDS | 20.0% |
| !!! | ATTGATTTTGGAATTTTCTA+TGG | + | chr2_2:64447960-64447979 | Msa0264520:CDS | 20.0% |
| ! | ATGTTATTGGAATATCTTGT+CGG | - | chr2_2:64446922-64446941 | None:intergenic | 25.0% |
| ! | TATGTATCTTAGGATGTTAT+TGG | - | chr2_2:64446935-64446954 | None:intergenic | 25.0% |
| ! | TAACTCATATGAATCTAACT+TGG | + | chr2_2:64447158-64447177 | Msa0264520:CDS | 25.0% |
| !!! | CACTATTTTGAAAATCGTTT+TGG | - | chr2_2:64447916-64447935 | None:intergenic | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | + | chr2_2:64448503-64448522 | Msa0264520:CDS | 25.0% |
| ! | ATGTTATTGGAATATCTTGT+CGG | - | chr2_2:64446922-64446941 | None:intergenic | 25.0% |
| ! | TATGTATCTTAGGATGTTAT+TGG | - | chr2_2:64446935-64446954 | None:intergenic | 25.0% |
| ! | TAACTCATATGAATCTAACT+TGG | + | chr2_2:64447158-64447177 | Msa0264520:CDS | 25.0% |
| !!! | CACTATTTTGAAAATCGTTT+TGG | - | chr2_2:64447916-64447935 | None:intergenic | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | + | chr2_2:64448503-64448522 | Msa0264520:CDS | 25.0% |
| !! | AAATCTTGCAGAAAAGTGTT+TGG | - | chr2_2:64446793-64446812 | None:intergenic | 30.0% |
| TCAGTAAACCAAGTAACAAA+TGG | + | chr2_2:64446826-64446845 | Msa0264520:CDS | 30.0% | |
| CAGTAAACCAAGTAACAAAT+GGG | + | chr2_2:64446827-64446846 | Msa0264520:CDS | 30.0% | |
| ! | ATTCAAACCCATTTGTTACT+TGG | - | chr2_2:64446837-64446856 | None:intergenic | 30.0% |
| ! | GGATGTCATTTATGTATCTT+AGG | - | chr2_2:64446945-64446964 | None:intergenic | 30.0% |
| ATACATAAATGACATCCTCA+TGG | + | chr2_2:64446948-64446967 | Msa0264520:CDS | 30.0% | |
| TAAAGGACTTTGTAGTTGTA+TGG | - | chr2_2:64447214-64447233 | None:intergenic | 30.0% | |
| !!! | ATCTTACGACTTCTTTTTTC+TGG | - | chr2_2:64447378-64447397 | None:intergenic | 30.0% |
| AGAAAAAAGAAGTCGTAAGA+TGG | + | chr2_2:64447377-64447396 | Msa0264520:CDS | 30.0% | |
| TGATACTTGTAATGAACAAG+AGG | + | chr2_2:64447410-64447429 | Msa0264520:CDS | 30.0% | |
| GATACTTGTAATGAACAAGA+GGG | + | chr2_2:64447411-64447430 | Msa0264520:CDS | 30.0% | |
| TTAGCTCATTACTTTGCTAA+TGG | + | chr2_2:64447756-64447775 | Msa0264520:CDS | 30.0% | |
| ! | TAATGGTCTTGAGATAAGAT+TGG | + | chr2_2:64447773-64447792 | Msa0264520:CDS | 30.0% |
| !!! | AGCGTTCATGTTATTGATTT+TGG | + | chr2_2:64447948-64447967 | Msa0264520:CDS | 30.0% |
| GCAATGAAGTTGTATTCAAA+TGG | - | chr2_2:64448149-64448168 | None:intergenic | 30.0% | |
| ATCGTTGTTTGATATGTTTG+AGG | + | chr2_2:64448415-64448434 | Msa0264520:CDS | 30.0% | |
| CTCACAAGCTATAACATTTA+TGG | - | chr2_2:64448504-64448523 | None:intergenic | 30.0% | |
| ! | CATAAATGTTATAGCTTGTG+AGG | + | chr2_2:64448502-64448521 | Msa0264520:CDS | 30.0% |
| ! | CATCGACTACAAAATCTTTA+TGG | - | chr2_2:64448655-64448674 | None:intergenic | 30.0% |
| ! | TAAAGATTTTGTAGTCGATG+TGG | + | chr2_2:64448655-64448674 | Msa0264520:CDS | 30.0% |
| ! | TTTTGAATGCTTTATCAGCT+TGG | + | chr2_2:64448714-64448733 | Msa0264520:CDS | 30.0% |
| TTTGAATGCTTTATCAGCTT+GGG | + | chr2_2:64448715-64448734 | Msa0264520:CDS | 30.0% | |
| !! | AAATCTTGCAGAAAAGTGTT+TGG | - | chr2_2:64446793-64446812 | None:intergenic | 30.0% |
| TCAGTAAACCAAGTAACAAA+TGG | + | chr2_2:64446826-64446845 | Msa0264520:CDS | 30.0% | |
| CAGTAAACCAAGTAACAAAT+GGG | + | chr2_2:64446827-64446846 | Msa0264520:CDS | 30.0% | |
| ! | ATTCAAACCCATTTGTTACT+TGG | - | chr2_2:64446837-64446856 | None:intergenic | 30.0% |
| ! | GGATGTCATTTATGTATCTT+AGG | - | chr2_2:64446945-64446964 | None:intergenic | 30.0% |
| ATACATAAATGACATCCTCA+TGG | + | chr2_2:64446948-64446967 | Msa0264520:CDS | 30.0% | |
| TAAAGGACTTTGTAGTTGTA+TGG | - | chr2_2:64447214-64447233 | None:intergenic | 30.0% | |
| !!! | ATCTTACGACTTCTTTTTTC+TGG | - | chr2_2:64447378-64447397 | None:intergenic | 30.0% |
| AGAAAAAAGAAGTCGTAAGA+TGG | + | chr2_2:64447377-64447396 | Msa0264520:CDS | 30.0% | |
| TGATACTTGTAATGAACAAG+AGG | + | chr2_2:64447410-64447429 | Msa0264520:CDS | 30.0% | |
| GATACTTGTAATGAACAAGA+GGG | + | chr2_2:64447411-64447430 | Msa0264520:CDS | 30.0% | |
| TTAGCTCATTACTTTGCTAA+TGG | + | chr2_2:64447756-64447775 | Msa0264520:CDS | 30.0% | |
| ! | TAATGGTCTTGAGATAAGAT+TGG | + | chr2_2:64447773-64447792 | Msa0264520:CDS | 30.0% |
| !!! | AGCGTTCATGTTATTGATTT+TGG | + | chr2_2:64447948-64447967 | Msa0264520:CDS | 30.0% |
| GCAATGAAGTTGTATTCAAA+TGG | - | chr2_2:64448149-64448168 | None:intergenic | 30.0% | |
| ATCGTTGTTTGATATGTTTG+AGG | + | chr2_2:64448415-64448434 | Msa0264520:CDS | 30.0% | |
| CTCACAAGCTATAACATTTA+TGG | - | chr2_2:64448504-64448523 | None:intergenic | 30.0% | |
| ! | CATAAATGTTATAGCTTGTG+AGG | + | chr2_2:64448502-64448521 | Msa0264520:CDS | 30.0% |
| ! | CATCGACTACAAAATCTTTA+TGG | - | chr2_2:64448655-64448674 | None:intergenic | 30.0% |
| ! | TAAAGATTTTGTAGTCGATG+TGG | + | chr2_2:64448655-64448674 | Msa0264520:CDS | 30.0% |
| ! | TTTTGAATGCTTTATCAGCT+TGG | + | chr2_2:64448714-64448733 | Msa0264520:CDS | 30.0% |
| TTTGAATGCTTTATCAGCTT+GGG | + | chr2_2:64448715-64448734 | Msa0264520:CDS | 30.0% | |
| GTTACTTGGTTTACTGAGTT+TGG | - | chr2_2:64446823-64446842 | None:intergenic | 35.0% | |
| !!! | CTTTTTTCTGGTTCTGTTGA+AGG | - | chr2_2:64447366-64447385 | None:intergenic | 35.0% |
| ! | AGTACCTCATCTAAAATCTC+TGG | - | chr2_2:64447483-64447502 | None:intergenic | 35.0% |
| CAACATTATGTGATGCTTGT+TGG | - | chr2_2:64447539-64447558 | None:intergenic | 35.0% | |
| !! | GCATCACATAATGTTGATTC+AGG | + | chr2_2:64447543-64447562 | Msa0264520:CDS | 35.0% |
| !! | TCACATAATGTTGATTCAGG+AGG | + | chr2_2:64447546-64447565 | Msa0264520:CDS | 35.0% |
| !! | TAATGTTGATTCAGGAGGAA+AGG | + | chr2_2:64447551-64447570 | Msa0264520:CDS | 35.0% |
| !! | TTGTGCACATTGATTTAGCA+TGG | - | chr2_2:64447646-64447665 | None:intergenic | 35.0% |
| ATGAGCTACTCAAACAGATT+AGG | + | chr2_2:64447697-64447716 | Msa0264520:CDS | 35.0% | |
| ! | GAATTTTCTATGGTTTCCAG+TGG | + | chr2_2:64447970-64447989 | Msa0264520:CDS | 35.0% |
| TTAATGATAGTCTTCTGACG+AGG | - | chr2_2:64448001-64448020 | None:intergenic | 35.0% | |
| AGAAGACTATCATTAAGACC+TGG | + | chr2_2:64448005-64448024 | Msa0264520:CDS | 35.0% | |
| ATTCCTGTAATTCGAAGCTT+TGG | - | chr2_2:64448038-64448057 | None:intergenic | 35.0% | |
| ACAACTTCATTGCACAGAAA+TGG | + | chr2_2:64448156-64448175 | Msa0264520:CDS | 35.0% | |
| CAACTTCATTGCACAGAAAT+GGG | + | chr2_2:64448157-64448176 | Msa0264520:CDS | 35.0% | |
| AATCCAAAAGTCTTCTTCCA+TGG | + | chr2_2:64448323-64448342 | Msa0264520:CDS | 35.0% | |
| ! | TTAAACCGAGTTGGGAAAAA+CGG | - | chr2_2:64448374-64448393 | None:intergenic | 35.0% |
| TATCAAACAACGATGAGAAG+TGG | - | chr2_2:64448409-64448428 | None:intergenic | 35.0% | |
| TGAAACGAAAACAATCGTGA+AGG | + | chr2_2:64448625-64448644 | Msa0264520:CDS | 35.0% | |
| GTTACTTGGTTTACTGAGTT+TGG | - | chr2_2:64446823-64446842 | None:intergenic | 35.0% | |
| !!! | CTTTTTTCTGGTTCTGTTGA+AGG | - | chr2_2:64447366-64447385 | None:intergenic | 35.0% |
| ! | AGTACCTCATCTAAAATCTC+TGG | - | chr2_2:64447483-64447502 | None:intergenic | 35.0% |
| CAACATTATGTGATGCTTGT+TGG | - | chr2_2:64447539-64447558 | None:intergenic | 35.0% | |
| !! | GCATCACATAATGTTGATTC+AGG | + | chr2_2:64447543-64447562 | Msa0264520:CDS | 35.0% |
| !! | TCACATAATGTTGATTCAGG+AGG | + | chr2_2:64447546-64447565 | Msa0264520:CDS | 35.0% |
| !! | TAATGTTGATTCAGGAGGAA+AGG | + | chr2_2:64447551-64447570 | Msa0264520:CDS | 35.0% |
| !! | TTGTGCACATTGATTTAGCA+TGG | - | chr2_2:64447646-64447665 | None:intergenic | 35.0% |
| ATGAGCTACTCAAACAGATT+AGG | + | chr2_2:64447697-64447716 | Msa0264520:CDS | 35.0% | |
| ! | GAATTTTCTATGGTTTCCAG+TGG | + | chr2_2:64447970-64447989 | Msa0264520:CDS | 35.0% |
| TTAATGATAGTCTTCTGACG+AGG | - | chr2_2:64448001-64448020 | None:intergenic | 35.0% | |
| AGAAGACTATCATTAAGACC+TGG | + | chr2_2:64448005-64448024 | Msa0264520:CDS | 35.0% | |
| ATTCCTGTAATTCGAAGCTT+TGG | - | chr2_2:64448038-64448057 | None:intergenic | 35.0% | |
| ACAACTTCATTGCACAGAAA+TGG | + | chr2_2:64448156-64448175 | Msa0264520:CDS | 35.0% | |
| CAACTTCATTGCACAGAAAT+GGG | + | chr2_2:64448157-64448176 | Msa0264520:CDS | 35.0% | |
| AATCCAAAAGTCTTCTTCCA+TGG | + | chr2_2:64448323-64448342 | Msa0264520:CDS | 35.0% | |
| ! | TTAAACCGAGTTGGGAAAAA+CGG | - | chr2_2:64448374-64448393 | None:intergenic | 35.0% |
| TATCAAACAACGATGAGAAG+TGG | - | chr2_2:64448409-64448428 | None:intergenic | 35.0% | |
| TGAAACGAAAACAATCGTGA+AGG | + | chr2_2:64448625-64448644 | Msa0264520:CDS | 35.0% | |
| AAGCTCAAATGGACAATCCT+TGG | + | chr2_2:64446894-64446913 | Msa0264520:CDS | 40.0% | |
| AGTCATCTTCTTCATCCATG+AGG | - | chr2_2:64446966-64446985 | None:intergenic | 40.0% | |
| CATGGATGAAGAAGATGACT+TGG | + | chr2_2:64446966-64446985 | Msa0264520:CDS | 40.0% | |
| ! | GCAGGAATGTTTAAGACTTC+AGG | + | chr2_2:64447008-64447027 | Msa0264520:CDS | 40.0% |
| ! | ATCGTAGAAGGACTTTTCAG+CGG | - | chr2_2:64447034-64447053 | None:intergenic | 40.0% |
| AAGTCCTTCTACGATGTTCT+TGG | + | chr2_2:64447039-64447058 | Msa0264520:CDS | 40.0% | |
| ! | TCAGTGCTATCATTTGGTGA+AGG | - | chr2_2:64447075-64447094 | None:intergenic | 40.0% |
| AAGATTCGAATTCGACGACA+TGG | - | chr2_2:64447188-64447207 | None:intergenic | 40.0% | |
| ! | GGTGCTAACCATTTTCACAA+CGG | + | chr2_2:64447291-64447310 | Msa0264520:CDS | 40.0% |
| ! | ACCATTTTCACAACGGAACT+TGG | + | chr2_2:64447298-64447317 | Msa0264520:CDS | 40.0% |
| TCCAAGTTCCGTTGTGAAAA+TGG | - | chr2_2:64447302-64447321 | None:intergenic | 40.0% | |
| TGTAATGAACAAGAGGGAAG+AGG | + | chr2_2:64447417-64447436 | Msa0264520:CDS | 40.0% | |
| ! | ACCTCATCTAAAATCTCTGG+TGG | - | chr2_2:64447480-64447499 | None:intergenic | 40.0% |
| !! | GAGGTACTGCTTTATCAGAA+AGG | + | chr2_2:64447495-64447514 | Msa0264520:CDS | 40.0% |
| AAATCAATGTGCACAAGCTG+TGG | + | chr2_2:64447650-64447669 | Msa0264520:CDS | 40.0% | |
| CAAAGTAATGAGCTAAACGC+TGG | - | chr2_2:64447752-64447771 | None:intergenic | 40.0% | |
| ACATCAAGAGGCTGATATGA+TGG | - | chr2_2:64447810-64447829 | None:intergenic | 40.0% | |
| ATCATATCAGCCTCTTGATG+TGG | + | chr2_2:64447809-64447828 | Msa0264520:CDS | 40.0% | |
| GTATTTGTCACTCTCTGCAA+AGG | - | chr2_2:64447885-64447904 | None:intergenic | 40.0% | |
| AGACTATCATTAAGACCTGG+TGG | + | chr2_2:64448008-64448027 | Msa0264520:CDS | 40.0% | |
| TTACAGGAATTGAGCTTCCT+CGG | + | chr2_2:64448048-64448067 | Msa0264520:CDS | 40.0% | |
| AGGATTTAGACCTGCAGAAA+GGG | + | chr2_2:64448073-64448092 | Msa0264520:CDS | 40.0% | |
| TGTCTATCTTTAGATCCTCG+AGG | - | chr2_2:64448193-64448212 | None:intergenic | 40.0% | |
| TCGAGGATCTAAAGATAGAC+AGG | + | chr2_2:64448192-64448211 | Msa0264520:CDS | 40.0% | |
| TTCAATGCCACAGTTTCATC+AGG | - | chr2_2:64448263-64448282 | None:intergenic | 40.0% | |
| ! | ACTCCATGGAAGAAGACTTT+TGG | - | chr2_2:64448329-64448348 | None:intergenic | 40.0% |
| ! | GTTTTTCCCAACTCGGTTTA+AGG | + | chr2_2:64448373-64448392 | Msa0264520:CDS | 40.0% |
| ! | GATTTTGTAGTCGATGTGGA+TGG | + | chr2_2:64448659-64448678 | Msa0264520:CDS | 40.0% |
| AAGCTCAAATGGACAATCCT+TGG | + | chr2_2:64446894-64446913 | Msa0264520:CDS | 40.0% | |
| AGTCATCTTCTTCATCCATG+AGG | - | chr2_2:64446966-64446985 | None:intergenic | 40.0% | |
| CATGGATGAAGAAGATGACT+TGG | + | chr2_2:64446966-64446985 | Msa0264520:CDS | 40.0% | |
| ! | GCAGGAATGTTTAAGACTTC+AGG | + | chr2_2:64447008-64447027 | Msa0264520:CDS | 40.0% |
| ! | ATCGTAGAAGGACTTTTCAG+CGG | - | chr2_2:64447034-64447053 | None:intergenic | 40.0% |
| AAGTCCTTCTACGATGTTCT+TGG | + | chr2_2:64447039-64447058 | Msa0264520:CDS | 40.0% | |
| ! | TCAGTGCTATCATTTGGTGA+AGG | - | chr2_2:64447075-64447094 | None:intergenic | 40.0% |
| AAGATTCGAATTCGACGACA+TGG | - | chr2_2:64447188-64447207 | None:intergenic | 40.0% | |
| ! | GGTGCTAACCATTTTCACAA+CGG | + | chr2_2:64447291-64447310 | Msa0264520:CDS | 40.0% |
| ! | ACCATTTTCACAACGGAACT+TGG | + | chr2_2:64447298-64447317 | Msa0264520:CDS | 40.0% |
| TCCAAGTTCCGTTGTGAAAA+TGG | - | chr2_2:64447302-64447321 | None:intergenic | 40.0% | |
| TGTAATGAACAAGAGGGAAG+AGG | + | chr2_2:64447417-64447436 | Msa0264520:CDS | 40.0% | |
| ! | ACCTCATCTAAAATCTCTGG+TGG | - | chr2_2:64447480-64447499 | None:intergenic | 40.0% |
| !! | GAGGTACTGCTTTATCAGAA+AGG | + | chr2_2:64447495-64447514 | Msa0264520:CDS | 40.0% |
| AAATCAATGTGCACAAGCTG+TGG | + | chr2_2:64447650-64447669 | Msa0264520:CDS | 40.0% | |
| CAAAGTAATGAGCTAAACGC+TGG | - | chr2_2:64447752-64447771 | None:intergenic | 40.0% | |
| ACATCAAGAGGCTGATATGA+TGG | - | chr2_2:64447810-64447829 | None:intergenic | 40.0% | |
| ATCATATCAGCCTCTTGATG+TGG | + | chr2_2:64447809-64447828 | Msa0264520:CDS | 40.0% | |
| GTATTTGTCACTCTCTGCAA+AGG | - | chr2_2:64447885-64447904 | None:intergenic | 40.0% | |
| AGACTATCATTAAGACCTGG+TGG | + | chr2_2:64448008-64448027 | Msa0264520:CDS | 40.0% | |
| TTACAGGAATTGAGCTTCCT+CGG | + | chr2_2:64448048-64448067 | Msa0264520:CDS | 40.0% | |
| AGGATTTAGACCTGCAGAAA+GGG | + | chr2_2:64448073-64448092 | Msa0264520:CDS | 40.0% | |
| TGTCTATCTTTAGATCCTCG+AGG | - | chr2_2:64448193-64448212 | None:intergenic | 40.0% | |
| TCGAGGATCTAAAGATAGAC+AGG | + | chr2_2:64448192-64448211 | Msa0264520:CDS | 40.0% | |
| TTCAATGCCACAGTTTCATC+AGG | - | chr2_2:64448263-64448282 | None:intergenic | 40.0% | |
| ! | ACTCCATGGAAGAAGACTTT+TGG | - | chr2_2:64448329-64448348 | None:intergenic | 40.0% |
| ! | GTTTTTCCCAACTCGGTTTA+AGG | + | chr2_2:64448373-64448392 | Msa0264520:CDS | 40.0% |
| ! | GATTTTGTAGTCGATGTGGA+TGG | + | chr2_2:64448659-64448678 | Msa0264520:CDS | 40.0% |
| CCAGAAGAAGAAGGTGAAGA+TGG | - | chr2_2:64446871-64446890 | None:intergenic | 45.0% | |
| CCATCTTCACCTTCTTCTTC+TGG | + | chr2_2:64446868-64446887 | Msa0264520:CDS | 45.0% | |
| TCTTCTGGCACAAGCTCAAA+TGG | + | chr2_2:64446883-64446902 | Msa0264520:CDS | 45.0% | |
| !! | GGAATATCTTGTCGGTTCCA+AGG | - | chr2_2:64446914-64446933 | None:intergenic | 45.0% |
| AAACATTCCTGCAGCATGCA+AGG | - | chr2_2:64447000-64447019 | None:intergenic | 45.0% | |
| ATGGCCAAGAACATCGTAGA+AGG | - | chr2_2:64447046-64447065 | None:intergenic | 45.0% | |
| ! | CATTTGGTGAAGGCTGGTTA+TGG | - | chr2_2:64447065-64447084 | None:intergenic | 45.0% |
| ! | TGCTATCATTTGGTGAAGGC+TGG | - | chr2_2:64447071-64447090 | None:intergenic | 45.0% |
| TCTGGGTCAGTGCTATCATT+TGG | - | chr2_2:64447081-64447100 | None:intergenic | 45.0% | |
| !! | AATGATAGCACTGACCCAGA+TGG | + | chr2_2:64447081-64447100 | Msa0264520:CDS | 45.0% |
| CGCGATCGAAATTTCCATCT+GGG | - | chr2_2:64447098-64447117 | None:intergenic | 45.0% | |
| !!! | GCTGCTAGTTTTGAGAGAAG+TGG | + | chr2_2:64447117-64447136 | Msa0264520:CDS | 45.0% |
| TTCACAACGGAACTTGGAGT+TGG | + | chr2_2:64447304-64447323 | Msa0264520:CDS | 45.0% | |
| GAATGACATTCAGCCAGTGA+CGG | + | chr2_2:64447326-64447345 | Msa0264520:CDS | 45.0% | |
| AAAACTTCTTCCACCGTCAC+TGG | - | chr2_2:64447342-64447361 | None:intergenic | 45.0% | |
| ! | GCCACCAGAGATTTTAGATG+AGG | + | chr2_2:64447476-64447495 | Msa0264520:CDS | 45.0% |
| TGATTCAGGAGGAAAGGCAA+AGG | + | chr2_2:64447557-64447576 | Msa0264520:CDS | 45.0% | |
| ATCTACGACAAACAATGCCG+CGG | + | chr2_2:64447605-64447624 | Msa0264520:CDS | 45.0% | |
| ! | CCTGTAATTCGAAGCTTTGG+AGG | - | chr2_2:64448035-64448054 | None:intergenic | 45.0% |
| CCTCCAAAGCTTCGAATTAC+AGG | + | chr2_2:64448032-64448051 | Msa0264520:CDS | 45.0% | |
| CTTTCTGCAGGTCTAAATCC+TGG | - | chr2_2:64448074-64448093 | None:intergenic | 45.0% | |
| CAGGATTTAGACCTGCAGAA+AGG | + | chr2_2:64448072-64448091 | Msa0264520:CDS | 45.0% | |
| ATTTAGACCTGCAGAAAGGG+TGG | + | chr2_2:64448076-64448095 | Msa0264520:CDS | 45.0% | |
| GAACCTTCCTGATGAAACTG+TGG | + | chr2_2:64448253-64448272 | Msa0264520:CDS | 45.0% | |
| ATGCCACAGTTTCATCAGGA+AGG | - | chr2_2:64448259-64448278 | None:intergenic | 45.0% | |
| AGCTTCAACACAGCTTCTCT+TGG | - | chr2_2:64448290-64448309 | None:intergenic | 45.0% | |
| AAGCTGTGTTGAAGCTGATC+AGG | + | chr2_2:64448294-64448313 | Msa0264520:CDS | 45.0% | |
| TTCTTCCATGGAGTTGCCAA+TGG | + | chr2_2:64448335-64448354 | Msa0264520:CDS | 45.0% | |
| AACTTCCATTGGCAACTCCA+TGG | - | chr2_2:64448343-64448362 | None:intergenic | 45.0% | |
| GTGCTTCCTTAAACCGAGTT+GGG | - | chr2_2:64448382-64448401 | None:intergenic | 45.0% | |
| AGTGCTTCCTTAAACCGAGT+TGG | - | chr2_2:64448383-64448402 | None:intergenic | 45.0% | |
| AGAGATCGATGCTTGAGAGA+GGG | + | chr2_2:64448462-64448481 | Msa0264520:CDS | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | + | chr2_2:64448470-64448489 | Msa0264520:CDS | 45.0% | |
| AGGTCAGGAATAAGAGAGCT+GGG | + | chr2_2:64448567-64448586 | Msa0264520:CDS | 45.0% | |
| TGGGTTCAAGCAAATCAGGT+TGG | + | chr2_2:64448586-64448605 | Msa0264520:CDS | 45.0% | |
| TAGTCGATGTGGATGGTAAG+TGG | + | chr2_2:64448666-64448685 | Msa0264520:CDS | 45.0% | |
| AGTCGATGTGGATGGTAAGT+GGG | + | chr2_2:64448667-64448686 | Msa0264520:CDS | 45.0% | |
| !! | GATGGTAAGTGGGTTTTGCA+GGG | + | chr2_2:64448677-64448696 | Msa0264520:CDS | 45.0% |
| CCAGAAGAAGAAGGTGAAGA+TGG | - | chr2_2:64446871-64446890 | None:intergenic | 45.0% | |
| CCATCTTCACCTTCTTCTTC+TGG | + | chr2_2:64446868-64446887 | Msa0264520:CDS | 45.0% | |
| TCTTCTGGCACAAGCTCAAA+TGG | + | chr2_2:64446883-64446902 | Msa0264520:CDS | 45.0% | |
| !! | GGAATATCTTGTCGGTTCCA+AGG | - | chr2_2:64446914-64446933 | None:intergenic | 45.0% |
| AAACATTCCTGCAGCATGCA+AGG | - | chr2_2:64447000-64447019 | None:intergenic | 45.0% | |
| ATGGCCAAGAACATCGTAGA+AGG | - | chr2_2:64447046-64447065 | None:intergenic | 45.0% | |
| ! | CATTTGGTGAAGGCTGGTTA+TGG | - | chr2_2:64447065-64447084 | None:intergenic | 45.0% |
| ! | TGCTATCATTTGGTGAAGGC+TGG | - | chr2_2:64447071-64447090 | None:intergenic | 45.0% |
| TCTGGGTCAGTGCTATCATT+TGG | - | chr2_2:64447081-64447100 | None:intergenic | 45.0% | |
| !! | AATGATAGCACTGACCCAGA+TGG | + | chr2_2:64447081-64447100 | Msa0264520:CDS | 45.0% |
| CGCGATCGAAATTTCCATCT+GGG | - | chr2_2:64447098-64447117 | None:intergenic | 45.0% | |
| !!! | GCTGCTAGTTTTGAGAGAAG+TGG | + | chr2_2:64447117-64447136 | Msa0264520:CDS | 45.0% |
| TTCACAACGGAACTTGGAGT+TGG | + | chr2_2:64447304-64447323 | Msa0264520:CDS | 45.0% | |
| GAATGACATTCAGCCAGTGA+CGG | + | chr2_2:64447326-64447345 | Msa0264520:CDS | 45.0% | |
| AAAACTTCTTCCACCGTCAC+TGG | - | chr2_2:64447342-64447361 | None:intergenic | 45.0% | |
| ! | GCCACCAGAGATTTTAGATG+AGG | + | chr2_2:64447476-64447495 | Msa0264520:CDS | 45.0% |
| TGATTCAGGAGGAAAGGCAA+AGG | + | chr2_2:64447557-64447576 | Msa0264520:CDS | 45.0% | |
| ATCTACGACAAACAATGCCG+CGG | + | chr2_2:64447605-64447624 | Msa0264520:CDS | 45.0% | |
| ! | CCTGTAATTCGAAGCTTTGG+AGG | - | chr2_2:64448035-64448054 | None:intergenic | 45.0% |
| CCTCCAAAGCTTCGAATTAC+AGG | + | chr2_2:64448032-64448051 | Msa0264520:CDS | 45.0% | |
| CTTTCTGCAGGTCTAAATCC+TGG | - | chr2_2:64448074-64448093 | None:intergenic | 45.0% | |
| CAGGATTTAGACCTGCAGAA+AGG | + | chr2_2:64448072-64448091 | Msa0264520:CDS | 45.0% | |
| ATTTAGACCTGCAGAAAGGG+TGG | + | chr2_2:64448076-64448095 | Msa0264520:CDS | 45.0% | |
| GAACCTTCCTGATGAAACTG+TGG | + | chr2_2:64448253-64448272 | Msa0264520:CDS | 45.0% | |
| ATGCCACAGTTTCATCAGGA+AGG | - | chr2_2:64448259-64448278 | None:intergenic | 45.0% | |
| AGCTTCAACACAGCTTCTCT+TGG | - | chr2_2:64448290-64448309 | None:intergenic | 45.0% | |
| AAGCTGTGTTGAAGCTGATC+AGG | + | chr2_2:64448294-64448313 | Msa0264520:CDS | 45.0% | |
| TTCTTCCATGGAGTTGCCAA+TGG | + | chr2_2:64448335-64448354 | Msa0264520:CDS | 45.0% | |
| AACTTCCATTGGCAACTCCA+TGG | - | chr2_2:64448343-64448362 | None:intergenic | 45.0% | |
| GTGCTTCCTTAAACCGAGTT+GGG | - | chr2_2:64448382-64448401 | None:intergenic | 45.0% | |
| AGTGCTTCCTTAAACCGAGT+TGG | - | chr2_2:64448383-64448402 | None:intergenic | 45.0% | |
| AGAGATCGATGCTTGAGAGA+GGG | + | chr2_2:64448462-64448481 | Msa0264520:CDS | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | + | chr2_2:64448470-64448489 | Msa0264520:CDS | 45.0% | |
| AGGTCAGGAATAAGAGAGCT+GGG | + | chr2_2:64448567-64448586 | Msa0264520:CDS | 45.0% | |
| TGGGTTCAAGCAAATCAGGT+TGG | + | chr2_2:64448586-64448605 | Msa0264520:CDS | 45.0% | |
| TAGTCGATGTGGATGGTAAG+TGG | + | chr2_2:64448666-64448685 | Msa0264520:CDS | 45.0% | |
| AGTCGATGTGGATGGTAAGT+GGG | + | chr2_2:64448667-64448686 | Msa0264520:CDS | 45.0% | |
| !! | GATGGTAAGTGGGTTTTGCA+GGG | + | chr2_2:64448677-64448696 | Msa0264520:CDS | 45.0% |
| GAGCTTGTGCCAGAAGAAGA+AGG | - | chr2_2:64446880-64446899 | None:intergenic | 50.0% | |
| GCAAAAACCTTGCATGCTGC+AGG | + | chr2_2:64446990-64447009 | Msa0264520:CDS | 50.0% | |
| GCGCGATCGAAATTTCCATC+TGG | - | chr2_2:64447099-64447118 | None:intergenic | 50.0% | |
| CCTTGTGTCTCGATGACAAC+TGG | - | chr2_2:64447273-64447292 | None:intergenic | 50.0% | |
| CCAGTTGTCATCGAGACACA+AGG | + | chr2_2:64447270-64447289 | Msa0264520:CDS | 50.0% | |
| ACAAGAGGGAAGAGGTAGCA+AGG | + | chr2_2:64447425-64447444 | Msa0264520:CDS | 50.0% | |
| ! | AGGCAACACTCTTCGCCTTT+TGG | + | chr2_2:64447717-64447736 | Msa0264520:CDS | 50.0% |
| ! | CACTCTTCGCCTTTTGGTGA+TGG | + | chr2_2:64447723-64447742 | Msa0264520:CDS | 50.0% |
| GATAGTCTTCTGACGAGGCA+TGG | - | chr2_2:64447996-64448015 | None:intergenic | 50.0% | |
| CTTTAGATCCTCGAGGCAGA+TGG | - | chr2_2:64448186-64448205 | None:intergenic | 50.0% | |
| CGGTGCGCTATAACTTCCAT+TGG | - | chr2_2:64448354-64448373 | None:intergenic | 50.0% | |
| GATCTCTGCATGTCTTCACG+AGG | - | chr2_2:64448449-64448468 | None:intergenic | 50.0% | |
| CAGAGATCGATGCTTGAGAG+AGG | + | chr2_2:64448461-64448480 | Msa0264520:CDS | 50.0% | |
| ! | TAGCTTGTGAGGGTGCAGAA+AGG | + | chr2_2:64448513-64448532 | Msa0264520:CDS | 50.0% |
| ! | AGCTTGTGAGGGTGCAGAAA+GGG | + | chr2_2:64448514-64448533 | Msa0264520:CDS | 50.0% |
| AGGGTGCAGAAAGGGTTGAA+AGG | + | chr2_2:64448522-64448541 | Msa0264520:CDS | 50.0% | |
| CAGGTCAGGAATAAGAGAGC+TGG | + | chr2_2:64448566-64448585 | Msa0264520:CDS | 50.0% | |
| GAGCTGGGTTCAAGCAAATC+AGG | + | chr2_2:64448582-64448601 | Msa0264520:CDS | 50.0% | |
| !! | GGATGGTAAGTGGGTTTTGC+AGG | + | chr2_2:64448676-64448695 | Msa0264520:CDS | 50.0% |
| !! | GTAAGTGGGTTTTGCAGGGA+TGG | + | chr2_2:64448681-64448700 | Msa0264520:CDS | 50.0% |
| ! | TGGGTTTTGCAGGGATGGAA+GGG | + | chr2_2:64448686-64448705 | Msa0264520:CDS | 50.0% |
| GAGCTTGTGCCAGAAGAAGA+AGG | - | chr2_2:64446880-64446899 | None:intergenic | 50.0% | |
| GCAAAAACCTTGCATGCTGC+AGG | + | chr2_2:64446990-64447009 | Msa0264520:CDS | 50.0% | |
| GCGCGATCGAAATTTCCATC+TGG | - | chr2_2:64447099-64447118 | None:intergenic | 50.0% | |
| CCTTGTGTCTCGATGACAAC+TGG | - | chr2_2:64447273-64447292 | None:intergenic | 50.0% | |
| CCAGTTGTCATCGAGACACA+AGG | + | chr2_2:64447270-64447289 | Msa0264520:CDS | 50.0% | |
| ACAAGAGGGAAGAGGTAGCA+AGG | + | chr2_2:64447425-64447444 | Msa0264520:CDS | 50.0% | |
| ! | AGGCAACACTCTTCGCCTTT+TGG | + | chr2_2:64447717-64447736 | Msa0264520:CDS | 50.0% |
| ! | CACTCTTCGCCTTTTGGTGA+TGG | + | chr2_2:64447723-64447742 | Msa0264520:CDS | 50.0% |
| GATAGTCTTCTGACGAGGCA+TGG | - | chr2_2:64447996-64448015 | None:intergenic | 50.0% | |
| CTTTAGATCCTCGAGGCAGA+TGG | - | chr2_2:64448186-64448205 | None:intergenic | 50.0% | |
| CGGTGCGCTATAACTTCCAT+TGG | - | chr2_2:64448354-64448373 | None:intergenic | 50.0% | |
| GATCTCTGCATGTCTTCACG+AGG | - | chr2_2:64448449-64448468 | None:intergenic | 50.0% | |
| CAGAGATCGATGCTTGAGAG+AGG | + | chr2_2:64448461-64448480 | Msa0264520:CDS | 50.0% | |
| ! | TAGCTTGTGAGGGTGCAGAA+AGG | + | chr2_2:64448513-64448532 | Msa0264520:CDS | 50.0% |
| ! | AGCTTGTGAGGGTGCAGAAA+GGG | + | chr2_2:64448514-64448533 | Msa0264520:CDS | 50.0% |
| AGGGTGCAGAAAGGGTTGAA+AGG | + | chr2_2:64448522-64448541 | Msa0264520:CDS | 50.0% | |
| CAGGTCAGGAATAAGAGAGC+TGG | + | chr2_2:64448566-64448585 | Msa0264520:CDS | 50.0% | |
| GAGCTGGGTTCAAGCAAATC+AGG | + | chr2_2:64448582-64448601 | Msa0264520:CDS | 50.0% | |
| !! | GGATGGTAAGTGGGTTTTGC+AGG | + | chr2_2:64448676-64448695 | Msa0264520:CDS | 50.0% |
| !! | GTAAGTGGGTTTTGCAGGGA+TGG | + | chr2_2:64448681-64448700 | Msa0264520:CDS | 50.0% |
| ! | TGGGTTTTGCAGGGATGGAA+GGG | + | chr2_2:64448686-64448705 | Msa0264520:CDS | 50.0% |
| TGACATTCAGCCAGTGACGG+TGG | + | chr2_2:64447329-64447348 | Msa0264520:CDS | 55.0% | |
| CTGTGGCGAGCTACGATCAA+AGG | + | chr2_2:64447667-64447686 | Msa0264520:CDS | 55.0% | |
| CGCTGGAGTCCATCACCAAA+AGG | - | chr2_2:64447735-64447754 | None:intergenic | 55.0% | |
| CCAGCAGTTGCCACATCAAG+AGG | - | chr2_2:64447822-64447841 | None:intergenic | 55.0% | |
| CCTCTTGATGTGGCAACTGC+TGG | + | chr2_2:64447819-64447838 | Msa0264520:CDS | 55.0% | |
| CACTCTCTGCAAAGGAGACG+CGG | - | chr2_2:64447877-64447896 | None:intergenic | 55.0% | |
| TAGACCTGCAGAAAGGGTGG+AGG | + | chr2_2:64448079-64448098 | Msa0264520:CDS | 55.0% | |
| GTTTCCTCCACCCTTTCTGC+AGG | - | chr2_2:64448086-64448105 | None:intergenic | 55.0% | |
| GCAGAAAGGGTGGAGGAAAC+CGG | + | chr2_2:64448086-64448105 | Msa0264520:CDS | 55.0% | |
| AAAGGGTGGAGGAAACCGGA+CGG | + | chr2_2:64448090-64448109 | Msa0264520:CDS | 55.0% | |
| !! | GTAGTTTGCTAGACGCCGTC+CGG | - | chr2_2:64448108-64448127 | None:intergenic | 55.0% |
| ATGGGAAACCATCTGCCTCG+AGG | + | chr2_2:64448175-64448194 | Msa0264520:CDS | 55.0% | |
| !! | GCGCACCGTTTTTCCCAACT+CGG | + | chr2_2:64448366-64448385 | Msa0264520:CDS | 55.0% |
| TGCCACTGCTTGTAGGTCTC+AGG | - | chr2_2:64448548-64448567 | None:intergenic | 55.0% | |
| TGAGACCTACAAGCAGTGGC+AGG | + | chr2_2:64448547-64448566 | Msa0264520:CDS | 55.0% | |
| ! | GTGGGTTTTGCAGGGATGGA+AGG | + | chr2_2:64448685-64448704 | Msa0264520:CDS | 55.0% |
| TGACATTCAGCCAGTGACGG+TGG | + | chr2_2:64447329-64447348 | Msa0264520:CDS | 55.0% | |
| CTGTGGCGAGCTACGATCAA+AGG | + | chr2_2:64447667-64447686 | Msa0264520:CDS | 55.0% | |
| CGCTGGAGTCCATCACCAAA+AGG | - | chr2_2:64447735-64447754 | None:intergenic | 55.0% | |
| CCAGCAGTTGCCACATCAAG+AGG | - | chr2_2:64447822-64447841 | None:intergenic | 55.0% | |
| CCTCTTGATGTGGCAACTGC+TGG | + | chr2_2:64447819-64447838 | Msa0264520:CDS | 55.0% | |
| CACTCTCTGCAAAGGAGACG+CGG | - | chr2_2:64447877-64447896 | None:intergenic | 55.0% | |
| TAGACCTGCAGAAAGGGTGG+AGG | + | chr2_2:64448079-64448098 | Msa0264520:CDS | 55.0% | |
| GTTTCCTCCACCCTTTCTGC+AGG | - | chr2_2:64448086-64448105 | None:intergenic | 55.0% | |
| GCAGAAAGGGTGGAGGAAAC+CGG | + | chr2_2:64448086-64448105 | Msa0264520:CDS | 55.0% | |
| AAAGGGTGGAGGAAACCGGA+CGG | + | chr2_2:64448090-64448109 | Msa0264520:CDS | 55.0% | |
| !! | GTAGTTTGCTAGACGCCGTC+CGG | - | chr2_2:64448108-64448127 | None:intergenic | 55.0% |
| ATGGGAAACCATCTGCCTCG+AGG | + | chr2_2:64448175-64448194 | Msa0264520:CDS | 55.0% | |
| !! | GCGCACCGTTTTTCCCAACT+CGG | + | chr2_2:64448366-64448385 | Msa0264520:CDS | 55.0% |
| TGCCACTGCTTGTAGGTCTC+AGG | - | chr2_2:64448548-64448567 | None:intergenic | 55.0% | |
| TGAGACCTACAAGCAGTGGC+AGG | + | chr2_2:64448547-64448566 | Msa0264520:CDS | 55.0% | |
| ! | GTGGGTTTTGCAGGGATGGA+AGG | + | chr2_2:64448685-64448704 | Msa0264520:CDS | 55.0% |
| GACAAACAATGCCGCGGCAG+TGG | + | chr2_2:64447611-64447630 | Msa0264520:CDS | 60.0% | |
| ! | ATGCCGCGGCAGTGGATTTG+TGG | + | chr2_2:64447619-64447638 | Msa0264520:CDS | 60.0% |
| GGTCCACAAATCCACTGCCG+CGG | - | chr2_2:64447625-64447644 | None:intergenic | 60.0% | |
| TTCTGACGAGGCATGGCCAC+TGG | - | chr2_2:64447989-64448008 | None:intergenic | 60.0% | |
| !! | CGAAGCTTTGGAGGACCACC+AGG | - | chr2_2:64448026-64448045 | None:intergenic | 60.0% |
| GGAATTGAGCTTCCTCGGCC+AGG | + | chr2_2:64448053-64448072 | Msa0264520:CDS | 60.0% | |
| GCAGGTCTAAATCCTGGCCG+AGG | - | chr2_2:64448068-64448087 | None:intergenic | 60.0% | |
| GGCCTGAGACCTACAAGCAG+TGG | + | chr2_2:64448543-64448562 | Msa0264520:CDS | 60.0% | |
| CCTGACCTGCCACTGCTTGT+AGG | - | chr2_2:64448555-64448574 | None:intergenic | 60.0% | |
| CCTACAAGCAGTGGCAGGTC+AGG | + | chr2_2:64448552-64448571 | Msa0264520:CDS | 60.0% | |
| GACAAACAATGCCGCGGCAG+TGG | + | chr2_2:64447611-64447630 | Msa0264520:CDS | 60.0% | |
| ! | ATGCCGCGGCAGTGGATTTG+TGG | + | chr2_2:64447619-64447638 | Msa0264520:CDS | 60.0% |
| GGTCCACAAATCCACTGCCG+CGG | - | chr2_2:64447625-64447644 | None:intergenic | 60.0% | |
| TTCTGACGAGGCATGGCCAC+TGG | - | chr2_2:64447989-64448008 | None:intergenic | 60.0% | |
| !! | CGAAGCTTTGGAGGACCACC+AGG | - | chr2_2:64448026-64448045 | None:intergenic | 60.0% |
| GGAATTGAGCTTCCTCGGCC+AGG | + | chr2_2:64448053-64448072 | Msa0264520:CDS | 60.0% | |
| GCAGGTCTAAATCCTGGCCG+AGG | - | chr2_2:64448068-64448087 | None:intergenic | 60.0% | |
| GGCCTGAGACCTACAAGCAG+TGG | + | chr2_2:64448543-64448562 | Msa0264520:CDS | 60.0% | |
| CCTGACCTGCCACTGCTTGT+AGG | - | chr2_2:64448555-64448574 | None:intergenic | 60.0% | |
| CCTACAAGCAGTGGCAGGTC+AGG | + | chr2_2:64448552-64448571 | Msa0264520:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 64446781 | 64448748 | 64446781 | ID=Msa0264520;Name=Msa0264520 |
| chr2_2 | mRNA | 64446781 | 64448748 | 64446781 | ID=Msa0264520-mRNA-1;Parent=Msa0264520;Name=Msa0264520-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|655 |
| chr2_2 | exon | 64446781 | 64448748 | 64446781 | ID=Msa0264520-mRNA-1:exon:20121;Parent=Msa0264520-mRNA-1 |
| chr2_2 | CDS | 64446781 | 64448748 | 64446781 | ID=Msa0264520-mRNA-1:cds;Parent=Msa0264520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
