Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267780 | XP_013468988.1 | 99.435 | 177 | 1 | 0 | 1 | 177 | 1 | 177 | 1.49e-126 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267780 | sp|Q9SQZ9|PITH1_ARATH | 80.791 | 177 | 33 | 1 | 1 | 177 | 1 | 176 | 9.70e-103 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267780 | I3SPG3 | 99.435 | 177 | 1 | 0 | 1 | 177 | 1 | 177 | 7.10e-127 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024710 | Msa0267780 | 0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0031820 | Msa0267780 | 0.801384 | 9.237799e-49 | -8.615850e-47 |
| Msa0032090 | Msa0267780 | 0.817000 | 4.136796e-52 | -8.615850e-47 |
| Msa0037160 | Msa0267780 | 0.801417 | 9.095141e-49 | -8.615850e-47 |
| Msa0040690 | Msa0267780 | 0.818325 | 2.079581e-52 | -8.615850e-47 |
| Msa0041720 | Msa0267780 | 0.800137 | 1.659529e-48 | -8.615850e-47 |
| Msa0046760 | Msa0267780 | 0.809360 | 1.966723e-50 | -8.615850e-47 |
| Msa0079380 | Msa0267780 | 0.802325 | 5.919682e-49 | -8.615850e-47 |
| Msa0097600 | Msa0267780 | 0.817628 | 2.987817e-52 | -8.615850e-47 |
| Msa0171850 | Msa0267780 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
| Msa0189300 | Msa0267780 | 0.805441 | 1.333123e-49 | -8.615850e-47 |
| Msa0197520 | Msa0267780 | 0.802525 | 5.383282e-49 | -8.615850e-47 |
| Msa0215590 | Msa0267780 | 0.814986 | 1.165092e-51 | -8.615850e-47 |
| Msa0227400 | Msa0267780 | 0.800907 | 1.156138e-48 | -8.615850e-47 |
| Msa0231660 | Msa0267780 | 0.810251 | 1.264608e-50 | -8.615850e-47 |
| Msa0266350 | Msa0267780 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0267780 | Msa0316910 | 0.801755 | 7.752063e-49 | -8.615850e-47 |
| Msa0267780 | Msa0333650 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
| Msa0267780 | Msa0342010 | 0.804841 | 1.779995e-49 | -8.615850e-47 |
| Msa0267780 | Msa0432770 | 0.802485 | 5.485276e-49 | -8.615850e-47 |
| Msa0267780 | Msa0479170 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0267780 | Msa0479200 | 0.807598 | 4.674935e-50 | -8.615850e-47 |
| Msa0267780 | Msa0481750 | 0.809071 | 2.267517e-50 | -8.615850e-47 |
| Msa0267780 | Msa0506670 | 0.803489 | 3.401387e-49 | -8.615850e-47 |
| Msa0267780 | Msa0510930 | 0.804927 | 1.707923e-49 | -8.615850e-47 |
| Msa0267780 | Msa0526690 | 0.869742 | 2.465073e-66 | -8.615850e-47 |
| Msa0267780 | Msa0532980 | 0.801264 | 9.773850e-49 | -8.615850e-47 |
| Msa0267780 | Msa0561430 | 0.804675 | 1.927663e-49 | -8.615850e-47 |
| Msa0267780 | Msa0615440 | 0.828865 | 7.088509e-55 | -8.615850e-47 |
| Msa0267780 | Msa0620620 | 0.823988 | 1.029410e-53 | -8.615850e-47 |
| Msa0267780 | Msa0682900 | 0.800538 | 1.375273e-48 | -8.615850e-47 |
| Msa0267780 | Msa0698490 | 0.825016 | 5.897944e-54 | -8.615850e-47 |
| Msa0267780 | Msa0698660 | 0.824258 | 8.898251e-54 | -8.615850e-47 |
| Msa0267780 | Msa0707250 | 0.805070 | 1.593836e-49 | -8.615850e-47 |
| Msa0267780 | Msa0826760 | 0.829703 | 4.438955e-55 | -8.615850e-47 |
| Msa0267780 | Msa0865570 | 0.804695 | 1.909543e-49 | -8.615850e-47 |
| Msa0267780 | Msa1006840 | 0.810126 | 1.346164e-50 | -8.615850e-47 |
| Msa0267780 | Msa1040840 | 0.804735 | 1.872903e-49 | -8.615850e-47 |
| Msa0267780 | Msa1041520 | 0.800051 | 1.727618e-48 | -8.615850e-47 |
| Msa0267780 | Msa1073490 | 0.814846 | 1.251185e-51 | -8.615850e-47 |
| Msa0267780 | Msa1080640 | 0.820182 | 7.850231e-53 | -8.615850e-47 |
| Msa0267780 | Msa1126450 | 0.804370 | 2.232340e-49 | -8.615850e-47 |
| Msa0267780 | Msa1135890 | 0.838787 | 2.336742e-57 | -8.615850e-47 |
| Msa0267780 | Msa1169040 | 0.803320 | 3.688667e-49 | -8.615850e-47 |
| Msa0267780 | Msa1206670 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0267780 | Msa1206850 | 0.812720 | 3.678296e-51 | -8.615850e-47 |
| Msa0267780 | Msa1344340 | 0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0267780 | Msa1375680 | 0.808374 | 3.196565e-50 | -8.615850e-47 |
| Msa0267780 | Msa1390300 | 0.878222 | 3.344350e-69 | -8.615850e-47 |
| Msa0267780 | Msa1415640 | 0.806249 | 9.017397e-50 | -8.615850e-47 |
| Msa0267780 | Msa1418280 | 0.810301 | 1.234104e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267780 | MtrunA17_Chr1g0190801 | 99.435 | 177 | 1 | 0 | 1 | 177 | 1 | 177 | 1.37e-130 | 363 |
| Msa0267780 | MtrunA17_Chr2g0285181 | 32.500 | 160 | 94 | 8 | 17 | 169 | 20 | 172 | 8.90e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0267780 | AT3G04780.1 | 80.791 | 177 | 33 | 1 | 1 | 177 | 1 | 176 | 9.86e-104 | 295 |
| Msa0267780 | AT2G25950.1 | 32.298 | 161 | 93 | 8 | 17 | 169 | 20 | 172 | 1.45e-11 | 60.8 |
| Msa0267780 | AT2G25950.2 | 32.298 | 161 | 93 | 8 | 17 | 169 | 20 | 172 | 1.98e-11 | 60.5 |
Find 57 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATTTGTTTGTGCGATATA+TGG | 0.220675 | 2_2:+69554959 | None:intergenic |
| GAAAAGAGCTTCACTGTCTT+GGG | 0.289539 | 2_2:+69553149 | None:intergenic |
| ATATTCAGCTTCATGAATAA+TGG | 0.295236 | 2_2:-69550864 | Msa0267780:three_prime_UTR |
| CCACCAAATTGTGGCGTGTA+TGG | 0.316923 | 2_2:-69550533 | Msa0267780:three_prime_UTR |
| AACCCATACACGCCACAATT+TGG | 0.328476 | 2_2:+69550530 | None:intergenic |
| ATAGTATTACCTTCATCTTC+AGG | 0.337204 | 2_2:+69554475 | None:intergenic |
| AAGTAACAACACATTTCTTT+TGG | 0.338093 | 2_2:-69550500 | None:intergenic |
| TCAAAATTTCCAAGGGTAGA+TGG | 0.343531 | 2_2:+69550898 | None:intergenic |
| ACAAGGAACACATGGGATTC+AGG | 0.346409 | 2_2:-69553124 | Msa0267780:intron |
| TATCTTGAATGACTTAAGAT+TGG | 0.366253 | 2_2:-69550674 | Msa0267780:three_prime_UTR |
| GGAAAAGAGCTTCACTGTCT+TGG | 0.377000 | 2_2:+69553148 | None:intergenic |
| ATAGTAACCCTATTCTATTT+CGG | 0.379348 | 2_2:+69550569 | None:intergenic |
| CGAACCTGTTTAATAGCGTT+GGG | 0.387848 | 2_2:+69554704 | None:intergenic |
| GCGAGCGAGCGAGCAATGTC+TGG | 0.395374 | 2_2:-69554927 | Msa0267780:exon |
| GTTCAGAAGATTATGCTGAT+TGG | 0.398671 | 2_2:-69552624 | Msa0267780:CDS |
| ATCTCTTAGACTTCATAGAT+TGG | 0.400371 | 2_2:-69554769 | Msa0267780:CDS |
| GAATCCCATGTGTTCCTTGT+TGG | 0.401137 | 2_2:+69553127 | None:intergenic |
| ATATGCATCCGAAATAGAAT+AGG | 0.420531 | 2_2:-69550577 | Msa0267780:three_prime_UTR |
| CAGCTTGACAATATTTATTG+AGG | 0.448896 | 2_2:-69552676 | Msa0267780:CDS |
| TCTCCCCAACGCTATTAAAC+AGG | 0.449659 | 2_2:-69554708 | Msa0267780:intron |
| TATTCTCTTATAGGGAAAAC+CGG | 0.450332 | 2_2:-69552836 | Msa0267780:intron |
| CCGAACCTGTTTAATAGCGT+TGG | 0.450637 | 2_2:+69554703 | None:intergenic |
| TTGACATACTTTAAAAGTAC+CGG | 0.471646 | 2_2:+69552817 | None:intergenic |
| TATGCATCCGAAATAGAATA+GGG | 0.472594 | 2_2:-69550576 | Msa0267780:three_prime_UTR |
| AATTGTGGCGTGTATGGGTT+CGG | 0.473971 | 2_2:-69550527 | Msa0267780:three_prime_UTR |
| ATGTCAAATTTCAAAATGTC+CGG | 0.480329 | 2_2:-69552801 | Msa0267780:CDS |
| CACCAAATTGTGGCGTGTAT+GGG | 0.483217 | 2_2:-69550532 | Msa0267780:three_prime_UTR |
| ACCCTTGTGAACAGCGGTGG+TGG | 0.483236 | 2_2:+69554896 | None:intergenic |
| CTTTATTCAGTTGCTTTCAA+AGG | 0.501742 | 2_2:-69554499 | Msa0267780:CDS |
| GGTGTGACAATTTATGTGAT+AGG | 0.502172 | 2_2:-69550775 | Msa0267780:three_prime_UTR |
| ATTTCCAATCAAAATTTCCA+AGG | 0.510535 | 2_2:+69550890 | None:intergenic |
| TCTGCACATCCATCTACCCT+TGG | 0.510956 | 2_2:-69550907 | Msa0267780:three_prime_UTR |
| AGTTTAATAACTTGAGTGAA+AGG | 0.521408 | 2_2:+69554520 | None:intergenic |
| GAAGGGTTTGAAGAAGATTG+AGG | 0.521516 | 2_2:-69550965 | Msa0267780:CDS |
| CCATACACGCCACAATTTGG+TGG | 0.524359 | 2_2:+69550533 | None:intergenic |
| TTAGACTTCATAGATTGGAC+TGG | 0.525278 | 2_2:-69554764 | Msa0267780:CDS |
| TAGGGTTATAGAGAAGATGA+TGG | 0.528724 | 2_2:-69554589 | Msa0267780:CDS |
| TGTTAAACAGTATATCTGCT+TGG | 0.533996 | 2_2:-69550797 | Msa0267780:three_prime_UTR |
| AGCCACCACCGCTGTTCACA+AGG | 0.536518 | 2_2:-69554898 | Msa0267780:CDS |
| AGTTGAAACAACGGACATGA+AGG | 0.536929 | 2_2:-69550983 | Msa0267780:CDS |
| GTTAAACAGTATATCTGCTT+GGG | 0.538527 | 2_2:-69550796 | Msa0267780:three_prime_UTR |
| AAAATTAATGTATCACTTGG+TGG | 0.546577 | 2_2:+69552985 | None:intergenic |
| GACAAAATTAATGTATCACT+TGG | 0.564267 | 2_2:+69552982 | None:intergenic |
| TTGGAGCTAGACTACATTGA+CGG | 0.576277 | 2_2:-69550655 | Msa0267780:three_prime_UTR |
| TTCAAAGGTCCTGAAGATGA+AGG | 0.580336 | 2_2:-69554484 | Msa0267780:intron |
| TATGGAAAGAGAGAGAAGAG+AGG | 0.580454 | 2_2:+69554977 | None:intergenic |
| TTTGTCTCCTGAAAACCTCA+AGG | 0.583750 | 2_2:-69552965 | Msa0267780:intron |
| TTTCCAATCAAAATTTCCAA+GGG | 0.596549 | 2_2:+69550891 | None:intergenic |
| AAAAGAGCTTCACTGTCTTG+GGG | 0.597831 | 2_2:+69553150 | None:intergenic |
| GTTGAAACAACGGACATGAA+GGG | 0.604552 | 2_2:-69550982 | Msa0267780:CDS |
| TACTTGACCCTTGTGAACAG+CGG | 0.613002 | 2_2:+69554890 | None:intergenic |
| TCAAATTTCAAAATGTCCGG+AGG | 0.653931 | 2_2:-69552798 | Msa0267780:intron |
| TTGACCCTTGTGAACAGCGG+TGG | 0.656088 | 2_2:+69554893 | None:intergenic |
| GATGTAATGTTCAAGCTGCA+TGG | 0.657411 | 2_2:-69550753 | Msa0267780:three_prime_UTR |
| GAACCTGTTTAATAGCGTTG+GGG | 0.669005 | 2_2:+69554705 | None:intergenic |
| GCCACCACCGCTGTTCACAA+GGG | 0.677895 | 2_2:-69554897 | Msa0267780:CDS |
| TTGATGCAGAGTTGAAACAA+CGG | 0.696444 | 2_2:-69550992 | Msa0267780:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTATTAATTTAATC+AGG | - | chr2_2:69550712-69550731 | Msa0267780:three_prime_UTR | 10.0% |
| !!! | TTTTTTTACTAATGAAAATT+AGG | - | chr2_2:69550899-69550918 | Msa0267780:three_prime_UTR | 10.0% |
| !!! | TTTTTTACTAATGAAAATTA+GGG | - | chr2_2:69550900-69550919 | Msa0267780:three_prime_UTR | 10.0% |
| !!! | ATTTTTATTTTTTGAAAACT+CGG | - | chr2_2:69551372-69551391 | Msa0267780:intron | 10.0% |
| !! | AAAATTAATAAATAATGTCT+TGG | + | chr2_2:69551890-69551909 | None:intergenic | 10.0% |
| !! | TAGAAAATTTAAATAAATTG+AGG | + | chr2_2:69552029-69552048 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTCTATCATATT+TGG | - | chr2_2:69552621-69552640 | Msa0267780:CDS | 10.0% |
| !!! | TATTTAATTTATTCTCTTAT+AGG | - | chr2_2:69552662-69552681 | Msa0267780:CDS | 10.0% |
| !!! | ATTTAATTTATTCTCTTATA+GGG | - | chr2_2:69552663-69552682 | Msa0267780:CDS | 10.0% |
| !! | AGTAACACAATAAAAAAAAA+GGG | + | chr2_2:69550850-69550869 | None:intergenic | 15.0% |
| !! | AAGTAACACAATAAAAAAAA+AGG | + | chr2_2:69550851-69550870 | None:intergenic | 15.0% |
| !! | TTATATGATATGAATGAATA+AGG | + | chr2_2:69551063-69551082 | None:intergenic | 15.0% |
| !! | AAAACCATTAAAATAAATTG+AGG | + | chr2_2:69551922-69551941 | None:intergenic | 15.0% |
| !!! | AAGTCAAATATTGTTTTATT+TGG | + | chr2_2:69553093-69553112 | None:intergenic | 15.0% |
| !! | TAACAATAATGTTATACATT+TGG | - | chr2_2:69553117-69553136 | Msa0267780:intron | 15.0% |
| !! | AACAATAATGTTATACATTT+GGG | - | chr2_2:69553118-69553137 | Msa0267780:intron | 15.0% |
| !!! | AAATTTATGAATGAATGTTT+TGG | - | chr2_2:69553164-69553183 | Msa0267780:intron | 15.0% |
| !!! | TATTTTCTTTTTCAAATGTT+TGG | - | chr2_2:69554782-69554801 | Msa0267780:intron | 15.0% |
| !!! | ATTTTCTTTTTCAAATGTTT+GGG | - | chr2_2:69554783-69554802 | Msa0267780:intron | 15.0% |
| !!! | CTTTAAAAGAAAAACTAATA+TGG | + | chr2_2:69554880-69554899 | None:intergenic | 15.0% |
| !!! | GATTATGATGATGAATAATA+GGG | + | chr2_2:69550652-69550671 | None:intergenic | 20.0% |
| !! | AAAGAAAAAGATTAGTAACT+AGG | + | chr2_2:69550699-69550718 | None:intergenic | 20.0% |
| !!! | CAATAAAAAAAAAGGGTTTT+TGG | + | chr2_2:69550843-69550862 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTCAAACATTAG+CGG | - | chr2_2:69551265-69551284 | Msa0267780:intron | 20.0% |
| !!! | ATCGACTATTTATATTTTCA+TGG | - | chr2_2:69551774-69551793 | Msa0267780:intron | 20.0% |
| !!! | GATACCTCAATTTATTTTAA+TGG | - | chr2_2:69551915-69551934 | Msa0267780:intron | 20.0% |
| !!! | TTTAAGACTATATACCATTA+TGG | + | chr2_2:69552122-69552141 | None:intergenic | 20.0% |
| !! | GCTATTAAAACAAACAAATT+TGG | + | chr2_2:69552425-69552444 | None:intergenic | 20.0% |
| !! | CTTTATAAAAGTAGGAAATA+AGG | + | chr2_2:69552746-69552765 | None:intergenic | 20.0% |
| !! | ACAATAATGTTATACATTTG+GGG | - | chr2_2:69553119-69553138 | Msa0267780:intron | 20.0% |
| !! | GAGGAATAAATCATATAAAA+TGG | - | chr2_2:69553655-69553674 | Msa0267780:intron | 20.0% |
| !! | AACCTAATTTGATTGATATA+AGG | + | chr2_2:69554265-69554284 | None:intergenic | 20.0% |
| !! | TTGGGTAATATGTAAAAAAT+TGG | - | chr2_2:69554801-69554820 | Msa0267780:intron | 20.0% |
| !! | TGGGTAATATGTAAAAAATT+GGG | - | chr2_2:69554802-69554821 | Msa0267780:intron | 20.0% |
| !!! | ATTTTTTAGAAAAGCAAAGT+AGG | + | chr2_2:69554912-69554931 | None:intergenic | 20.0% |
| !! | CGATTATGATGATGAATAAT+AGG | + | chr2_2:69550653-69550672 | None:intergenic | 25.0% |
| ! | AGTTTAATAACTTGAGTGAA+AGG | + | chr2_2:69550990-69551009 | None:intergenic | 25.0% |
| ! | TTACATGTACAATCATATGT+GGG | + | chr2_2:69551128-69551147 | None:intergenic | 25.0% |
| ! | TATTGAATGTAATCACATGT+TGG | + | chr2_2:69551235-69551254 | None:intergenic | 25.0% |
| ! | ACATGTATAGATACCAAAAT+GGG | + | chr2_2:69551342-69551361 | None:intergenic | 25.0% |
| ! | TACATGTATAGATACCAAAA+TGG | + | chr2_2:69551343-69551362 | None:intergenic | 25.0% |
| !! | TAGCTAATCATTTTCTTAAG+TGG | - | chr2_2:69552168-69552187 | Msa0267780:intron | 25.0% |
| ! | CTCATTATAAAATTCTTCCA+AGG | + | chr2_2:69552203-69552222 | None:intergenic | 25.0% |
| !! | GGAAGAATTTTATAATGAGA+TGG | - | chr2_2:69552204-69552223 | Msa0267780:intron | 25.0% |
| !! | AGAATTTTATAATGAGATGG+AGG | - | chr2_2:69552207-69552226 | Msa0267780:intron | 25.0% |
| ! | TTTGTTGACATGATTGTAAT+CGG | - | chr2_2:69552314-69552333 | Msa0267780:intron | 25.0% |
| ! | AAAATTAATGTATCACTTGG+TGG | + | chr2_2:69552525-69552544 | None:intergenic | 25.0% |
| ! | GACAAAATTAATGTATCACT+TGG | + | chr2_2:69552528-69552547 | None:intergenic | 25.0% |
| !! | TTGACATACTTTAAAAGTAC+CGG | + | chr2_2:69552693-69552712 | None:intergenic | 25.0% |
| ! | ATGTCAAATTTCAAAATGTC+CGG | - | chr2_2:69552706-69552725 | Msa0267780:intron | 25.0% |
| ! | AAATAATACCCCAAATAAAG+GGG | + | chr2_2:69553052-69553071 | None:intergenic | 25.0% |
| ! | CAAATAATACCCCAAATAAA+GGG | + | chr2_2:69553053-69553072 | None:intergenic | 25.0% |
| ! | ACAAATAATACCCCAAATAA+AGG | + | chr2_2:69553054-69553073 | None:intergenic | 25.0% |
| ! | AGAAGAATAGATCATACAAA+TGG | - | chr2_2:69553291-69553310 | Msa0267780:intron | 25.0% |
| ! | AATGTATTGGAGAGAAAATA+TGG | - | chr2_2:69553547-69553566 | Msa0267780:intron | 25.0% |
| ! | ATGTATTGGAGAGAAAATAT+GGG | - | chr2_2:69553548-69553567 | Msa0267780:intron | 25.0% |
| ! | TTATGATGTCAACTAATTTG+TGG | - | chr2_2:69553783-69553802 | Msa0267780:intron | 25.0% |
| ! | TGCAAAACAAAAAGATTATG+TGG | + | chr2_2:69553906-69553925 | None:intergenic | 25.0% |
| ! | ATTAAGTACCAATTCCAATA+TGG | + | chr2_2:69553959-69553978 | None:intergenic | 25.0% |
| !!! | GGTCAGACATTTTAAAATTT+CGG | + | chr2_2:69554110-69554129 | None:intergenic | 25.0% |
| !!! | ATTTTAAAATGTCTGACCAA+TGG | - | chr2_2:69554112-69554131 | Msa0267780:intron | 25.0% |
| ! | TGCCTTATATCAATCAAATT+AGG | - | chr2_2:69554260-69554279 | Msa0267780:intron | 25.0% |
| !!! | TCGAACATTTTGAAAATTGT+AGG | - | chr2_2:69554427-69554446 | Msa0267780:intron | 25.0% |
| ! | TTTCCAATCAAAATTTCCAA+GGG | + | chr2_2:69554619-69554638 | None:intergenic | 25.0% |
| ! | ATTTCCAATCAAAATTTCCA+AGG | + | chr2_2:69554620-69554639 | None:intergenic | 25.0% |
| ! | ATATTCAGCTTCATGAATAA+TGG | - | chr2_2:69554643-69554662 | Msa0267780:intron | 25.0% |
| ! | GGGTAATATGTAAAAAATTG+GGG | - | chr2_2:69554803-69554822 | Msa0267780:intron | 25.0% |
| ! | TATCTTGAATGACTTAAGAT+TGG | - | chr2_2:69554833-69554852 | Msa0267780:intron | 25.0% |
| ! | ATAGTAACCCTATTCTATTT+CGG | + | chr2_2:69554941-69554960 | None:intergenic | 25.0% |
| ATCTCTTAGACTTCATAGAT+TGG | - | chr2_2:69550738-69550757 | Msa0267780:three_prime_UTR | 30.0% | |
| ! | CTTTATTCAGTTGCTTTCAA+AGG | - | chr2_2:69551008-69551027 | Msa0267780:intron | 30.0% |
| ATAGTATTACCTTCATCTTC+AGG | + | chr2_2:69551035-69551054 | None:intergenic | 30.0% | |
| TACATGTACAATCATATGTG+GGG | + | chr2_2:69551127-69551146 | None:intergenic | 30.0% | |
| CTTACATGTACAATCATATG+TGG | + | chr2_2:69551129-69551148 | None:intergenic | 30.0% | |
| ATGTATAGATACCAAAATGG+GGG | + | chr2_2:69551340-69551359 | None:intergenic | 30.0% | |
| CATGTATAGATACCAAAATG+GGG | + | chr2_2:69551341-69551360 | None:intergenic | 30.0% | |
| TCTTAAGACTGACTAATTCA+AGG | - | chr2_2:69551402-69551421 | Msa0267780:intron | 30.0% | |
| CTTAAGACTGACTAATTCAA+GGG | - | chr2_2:69551403-69551422 | Msa0267780:intron | 30.0% | |
| TTAAGACTGACTAATTCAAG+GGG | - | chr2_2:69551404-69551423 | Msa0267780:intron | 30.0% | |
| TGCTAACAAGATGTAAAGTT+TGG | + | chr2_2:69551615-69551634 | None:intergenic | 30.0% | |
| AGTTAGTTCCTGTATTTGTT+AGG | - | chr2_2:69551709-69551728 | Msa0267780:intron | 30.0% | |
| GAGTTTAACCTAACAAATAC+AGG | + | chr2_2:69551720-69551739 | None:intergenic | 30.0% | |
| TATAGTAACATGTTACGCTT+TGG | + | chr2_2:69551751-69551770 | None:intergenic | 30.0% | |
| ! | TGGTTTTTGATAGAACACTA+TGG | - | chr2_2:69551935-69551954 | Msa0267780:intron | 30.0% |
| AACATCGCATTAATTTAGAG+TGG | + | chr2_2:69552091-69552110 | None:intergenic | 30.0% | |
| GATGTTCTATTCTTCCATAA+TGG | - | chr2_2:69552105-69552124 | Msa0267780:intron | 30.0% | |
| TGGTGAAGATTGTATTTGTA+GGG | + | chr2_2:69552262-69552281 | None:intergenic | 30.0% | |
| TTGGTGAAGATTGTATTTGT+AGG | + | chr2_2:69552263-69552282 | None:intergenic | 30.0% | |
| ! | AAAAAAGTGCAGTAGCAAAT+TGG | + | chr2_2:69552282-69552301 | None:intergenic | 30.0% |
| !! | TTGAGCATATTAATGGACTT+GGG | + | chr2_2:69552589-69552608 | None:intergenic | 30.0% |
| !! | ATTGAGCATATTAATGGACT+TGG | + | chr2_2:69552590-69552609 | None:intergenic | 30.0% |
| TATTCTCTTATAGGGAAAAC+CGG | - | chr2_2:69552671-69552690 | Msa0267780:CDS | 30.0% | |
| TAAGGAAAATAACATACCTC+CGG | + | chr2_2:69552728-69552747 | None:intergenic | 30.0% | |
| AATTGGATGAGAAAAATGGA+AGG | + | chr2_2:69552771-69552790 | None:intergenic | 30.0% | |
| !! | TTCCATTTTTCTCATCCAAT+TGG | - | chr2_2:69552770-69552789 | Msa0267780:intron | 30.0% |
| CTCAATAAATATTGTCAAGC+TGG | + | chr2_2:69552833-69552852 | None:intergenic | 30.0% | |
| CAGCTTGACAATATTTATTG+AGG | - | chr2_2:69552831-69552850 | Msa0267780:intron | 30.0% | |
| ATAATGTTATACATTTGGGG+TGG | - | chr2_2:69553122-69553141 | Msa0267780:intron | 30.0% | |
| !!! | AATGTTTTGGAGAGAAAGTA+GGG | - | chr2_2:69553177-69553196 | Msa0267780:intron | 30.0% |
| TGCTAAAATTCCATCATATG+TGG | - | chr2_2:69553222-69553241 | Msa0267780:intron | 30.0% | |
| AAATTCCATCATATGTGGTT+TGG | - | chr2_2:69553227-69553246 | Msa0267780:intron | 30.0% | |
| AATTCCATCATATGTGGTTT+GGG | - | chr2_2:69553228-69553247 | Msa0267780:intron | 30.0% | |
| GCCTAATACTTAAAGGTAAA+AGG | - | chr2_2:69553325-69553344 | Msa0267780:intron | 30.0% | |
| ! | GCCTTTTACCTTTAAGTATT+AGG | + | chr2_2:69553329-69553348 | None:intergenic | 30.0% |
| CAAATCTAAACCCTTTCTAA+TGG | + | chr2_2:69553376-69553395 | None:intergenic | 30.0% | |
| AGAAAGGGTTTAGATTTGAA+TGG | - | chr2_2:69553378-69553397 | Msa0267780:intron | 30.0% | |
| AGGTTTGTGAATGAATGTAT+TGG | - | chr2_2:69553534-69553553 | Msa0267780:intron | 30.0% | |
| TGCTAAAATTTCAACTTGTG+TGG | - | chr2_2:69553592-69553611 | Msa0267780:intron | 30.0% | |
| AAATTTCAACTTGTGTGGTT+TGG | - | chr2_2:69553597-69553616 | Msa0267780:intron | 30.0% | |
| AATTTCAACTTGTGTGGTTT+GGG | - | chr2_2:69553598-69553617 | Msa0267780:intron | 30.0% | |
| ! | CCTTTTACCTTTTACGTATT+AGG | + | chr2_2:69553684-69553703 | None:intergenic | 30.0% |
| CCTAATACGTAAAAGGTAAA+AGG | - | chr2_2:69553681-69553700 | Msa0267780:intron | 30.0% | |
| TATAAGTCAGACCATTAAGA+AGG | - | chr2_2:69553718-69553737 | Msa0267780:intron | 30.0% | |
| ATAAGTCAGACCATTAAGAA+GGG | - | chr2_2:69553719-69553738 | Msa0267780:intron | 30.0% | |
| CAAATCTAAACCCTTCTTAA+TGG | + | chr2_2:69553732-69553751 | None:intergenic | 30.0% | |
| TTGCAATGTGATCTACAAAT+TGG | - | chr2_2:69553921-69553940 | Msa0267780:intron | 30.0% | |
| TACTTAATTGTCTTGCTTGT+GGG | - | chr2_2:69553971-69553990 | Msa0267780:intron | 30.0% | |
| TAATTCAAAGAACGAAAGTG+TGG | + | chr2_2:69553997-69554016 | None:intergenic | 30.0% | |
| TCATCAACATTCAATCTCAA+AGG | + | chr2_2:69554155-69554174 | None:intergenic | 30.0% | |
| !!! | CAACACATATTTTGATGACA+TGG | - | chr2_2:69554302-69554321 | Msa0267780:intron | 30.0% |
| !!! | TTGACTCATACTTTTTTACG+AGG | + | chr2_2:69554576-69554595 | None:intergenic | 30.0% |
| TGTTAAACAGTATATCTGCT+TGG | - | chr2_2:69554710-69554729 | Msa0267780:CDS | 30.0% | |
| GTTAAACAGTATATCTGCTT+GGG | - | chr2_2:69554711-69554730 | Msa0267780:CDS | 30.0% | |
| ATATGCATCCGAAATAGAAT+AGG | - | chr2_2:69554930-69554949 | Msa0267780:exon | 30.0% | |
| TATGCATCCGAAATAGAATA+GGG | - | chr2_2:69554931-69554950 | Msa0267780:exon | 30.0% | |
| ! | CGATTTGTTTGTGCGATATA+TGG | + | chr2_2:69550551-69550570 | None:intergenic | 35.0% |
| TTAGACTTCATAGATTGGAC+TGG | - | chr2_2:69550743-69550762 | Msa0267780:three_prime_UTR | 35.0% | |
| TAGGGTTATAGAGAAGATGA+TGG | - | chr2_2:69550918-69550937 | Msa0267780:three_prime_UTR | 35.0% | |
| ACTCTGACACATTTGATTGA+AGG | - | chr2_2:69551168-69551187 | Msa0267780:intron | 35.0% | |
| TGTATAGATACCAAAATGGG+GGG | + | chr2_2:69551339-69551358 | None:intergenic | 35.0% | |
| ! | TAAGCCTTATCCAACTAAGT+GGG | + | chr2_2:69551985-69552004 | None:intergenic | 35.0% |
| ! | TTTTCCAACAAGGAACACAT+GGG | - | chr2_2:69552376-69552395 | Msa0267780:intron | 35.0% |
| AGCGACATTGAGCATATTAA+TGG | + | chr2_2:69552596-69552615 | None:intergenic | 35.0% | |
| TCAAATTTCAAAATGTCCGG+AGG | - | chr2_2:69552709-69552728 | Msa0267780:intron | 35.0% | |
| !! | GGAAGGCACTTTATAAAAGT+AGG | + | chr2_2:69552754-69552773 | None:intergenic | 35.0% |
| CACCAATTGGATGAGAAAAA+TGG | + | chr2_2:69552775-69552794 | None:intergenic | 35.0% | |
| ! | CATTTTTCTCATCCAATTGG+TGG | - | chr2_2:69552773-69552792 | Msa0267780:intron | 35.0% |
| GTTCAGAAGATTATGCTGAT+TGG | - | chr2_2:69552883-69552902 | Msa0267780:intron | 35.0% | |
| TAGGTATTTCTTCACACCAA+AGG | + | chr2_2:69552977-69552996 | None:intergenic | 35.0% | |
| CAAGTGTCAAATGGTTCAAT+AGG | + | chr2_2:69552996-69553015 | None:intergenic | 35.0% | |
| GGTAAAATGCAAGTGTCAAA+TGG | + | chr2_2:69553005-69553024 | None:intergenic | 35.0% | |
| !!! | GAATGTTTTGGAGAGAAAGT+AGG | - | chr2_2:69553176-69553195 | Msa0267780:intron | 35.0% |
| !!! | ATGTTTTGGAGAGAAAGTAG+GGG | - | chr2_2:69553178-69553197 | Msa0267780:intron | 35.0% |
| CTTTAAGTATTAGGCAACCT+AGG | + | chr2_2:69553320-69553339 | None:intergenic | 35.0% | |
| CTAGGTTGCCTAATACTTAA+AGG | - | chr2_2:69553318-69553337 | Msa0267780:intron | 35.0% | |
| TACAAGTCAGACCATTAGAA+AGG | - | chr2_2:69553362-69553381 | Msa0267780:intron | 35.0% | |
| ACAAGTCAGACCATTAGAAA+GGG | - | chr2_2:69553363-69553382 | Msa0267780:intron | 35.0% | |
| GTGGTAAACAACAACAATGA+AGG | + | chr2_2:69553479-69553498 | None:intergenic | 35.0% | |
| AGAGGAAACTGACAATTAAG+TGG | + | chr2_2:69553498-69553517 | None:intergenic | 35.0% | |
| ! | CTTATTGTTTCTTCTGCTAG+AGG | + | chr2_2:69553516-69553535 | None:intergenic | 35.0% |
| CTCTAGCAGAAGAAACAATA+AGG | - | chr2_2:69553514-69553533 | Msa0267780:intron | 35.0% | |
| ATGGTAGCCTAATACGTAAA+AGG | - | chr2_2:69553674-69553693 | Msa0267780:intron | 35.0% | |
| AAGAAGGGTTTAGATTTGAG+TGG | - | chr2_2:69553734-69553753 | Msa0267780:intron | 35.0% | |
| ! | TGATGTCAACTAATTTGTGG+AGG | - | chr2_2:69553786-69553805 | Msa0267780:intron | 35.0% |
| ! | GAATAAAGGTTTTCCCTACT+AGG | + | chr2_2:69553820-69553839 | None:intergenic | 35.0% |
| GTGGTAAGCAACAAGAATAA+AGG | + | chr2_2:69553834-69553853 | None:intergenic | 35.0% | |
| TAGCAGAAGAAACGATAAGA+CGG | - | chr2_2:69553872-69553891 | Msa0267780:intron | 35.0% | |
| TCGTATTGCCATATTGGAAT+TGG | - | chr2_2:69553948-69553967 | Msa0267780:intron | 35.0% | |
| GTACTTAATTGTCTTGCTTG+TGG | - | chr2_2:69553970-69553989 | Msa0267780:intron | 35.0% | |
| GAGACCAAATCTGTGAATAT+GGG | + | chr2_2:69554088-69554107 | None:intergenic | 35.0% | |
| !! | AAAAGCATTTCCAAATGCAC+AGG | - | chr2_2:69554392-69554411 | Msa0267780:intron | 35.0% |
| TTGATGCAGAGTTGAAACAA+CGG | - | chr2_2:69554515-69554534 | Msa0267780:CDS | 35.0% | |
| TCAAAATTTCCAAGGGTAGA+TGG | + | chr2_2:69554612-69554631 | None:intergenic | 35.0% | |
| !! | CTACCCTTGGAAATTTTGAT+TGG | - | chr2_2:69554613-69554632 | Msa0267780:intron | 35.0% |
| GGTGTGACAATTTATGTGAT+AGG | - | chr2_2:69554732-69554751 | Msa0267780:CDS | 35.0% | |
| ! | GATTTTCTTCCACCAAATTG+TGG | - | chr2_2:69554965-69554984 | Msa0267780:five_prime_UTR | 35.0% |
| TATGGAAAGAGAGAGAAGAG+AGG | + | chr2_2:69550533-69550552 | None:intergenic | 40.0% | |
| GAACCTGTTTAATAGCGTTG+GGG | + | chr2_2:69550805-69550824 | None:intergenic | 40.0% | |
| CGAACCTGTTTAATAGCGTT+GGG | + | chr2_2:69550806-69550825 | None:intergenic | 40.0% | |
| CCAACGCTATTAAACAGGTT+CGG | - | chr2_2:69550804-69550823 | Msa0267780:three_prime_UTR | 40.0% | |
| TTCAAAGGTCCTGAAGATGA+AGG | - | chr2_2:69551023-69551042 | Msa0267780:intron | 40.0% | |
| TGTGGGGATCAGGAAAAAAT+AGG | + | chr2_2:69551111-69551130 | None:intergenic | 40.0% | |
| TACAATCATATGTGGGGATC+AGG | + | chr2_2:69551121-69551140 | None:intergenic | 40.0% | |
| ! | CAGAGTGTTAAGTGTACATG+TGG | + | chr2_2:69551154-69551173 | None:intergenic | 40.0% |
| ATGTAATCACATGTTGGTGC+TGG | + | chr2_2:69551229-69551248 | None:intergenic | 40.0% | |
| !! | TGCTTTGCTCTGGCTTTAAA+CGG | + | chr2_2:69551458-69551477 | None:intergenic | 40.0% |
| ! | AAGCCTTATCCAACTAAGTG+GGG | + | chr2_2:69551984-69552003 | None:intergenic | 40.0% |
| ! | CTAAGCCTTATCCAACTAAG+TGG | + | chr2_2:69551986-69552005 | None:intergenic | 40.0% |
| GTAGGTGTAGTGAAGTAGTT+AGG | + | chr2_2:69552056-69552075 | None:intergenic | 40.0% | |
| GAGTGGTTAAAAGTAGCAGT+AGG | + | chr2_2:69552074-69552093 | None:intergenic | 40.0% | |
| TTAAGTGGTGTTCATCACCT+TGG | - | chr2_2:69552183-69552202 | Msa0267780:intron | 40.0% | |
| !! | TGTATTTGTAGGGTGCTGTA+AGG | + | chr2_2:69552252-69552271 | None:intergenic | 40.0% |
| !!! | CGGAGTCAATGTTGTTTTCT+AGG | - | chr2_2:69552334-69552353 | Msa0267780:intron | 40.0% |
| AAAAGAGCTTCACTGTCTTG+GGG | + | chr2_2:69552360-69552379 | None:intergenic | 40.0% | |
| GAAAAGAGCTTCACTGTCTT+GGG | + | chr2_2:69552361-69552380 | None:intergenic | 40.0% | |
| ! | AGTGAAGCTCTTTTCCAACA+AGG | - | chr2_2:69552366-69552385 | Msa0267780:intron | 40.0% |
| ! | CTTTTCCAACAAGGAACACA+TGG | - | chr2_2:69552375-69552394 | Msa0267780:intron | 40.0% |
| GATTCAGGTATAGCTTGGTT+TGG | - | chr2_2:69552398-69552417 | Msa0267780:intron | 40.0% | |
| CTTGTGCCCTGTGATTAAAT+CGG | - | chr2_2:69552446-69552465 | Msa0267780:intron | 40.0% | |
| ! | CAGCAACCGATTTAATCACA+GGG | + | chr2_2:69552455-69552474 | None:intergenic | 40.0% |
| ! | TCAGCAACCGATTTAATCAC+AGG | + | chr2_2:69552456-69552475 | None:intergenic | 40.0% |
| TTTGTCTCCTGAAAACCTCA+AGG | - | chr2_2:69552542-69552561 | Msa0267780:intron | 40.0% | |
| TGGACTTGGGAGAAAAGTTA+TGG | + | chr2_2:69552576-69552595 | None:intergenic | 40.0% | |
| ! | TTTTCTCATCCAATTGGTGG+TGG | - | chr2_2:69552776-69552795 | Msa0267780:intron | 40.0% |
| ! | TTTCTCATCCAATTGGTGGT+GGG | - | chr2_2:69552777-69552796 | Msa0267780:intron | 40.0% |
| ! | CTACAGCTTTGTGTTTCCTT+TGG | - | chr2_2:69552958-69552977 | Msa0267780:intron | 40.0% |
| AAGTCCCAAACCACATATGA+TGG | + | chr2_2:69553235-69553254 | None:intergenic | 40.0% | |
| ! | TCATATGTGGTTTGGGACTT+TGG | - | chr2_2:69553235-69553254 | Msa0267780:intron | 40.0% |
| ! | GTTTGGGACTTTGGTATATG+TGG | - | chr2_2:69553244-69553263 | Msa0267780:intron | 40.0% |
| TTCTTACCGAGACTTGTCTA+TGG | + | chr2_2:69553275-69553294 | None:intergenic | 40.0% | |
| GATCATACAAATGGTAGCCT+AGG | - | chr2_2:69553300-69553319 | Msa0267780:intron | 40.0% | |
| TTATGATGTCGAGTAAGCTG+TGG | - | chr2_2:69553428-69553447 | Msa0267780:intron | 40.0% | |
| ! | AAGGTTTTCCCTACTAGGTA+AGG | + | chr2_2:69553460-69553479 | None:intergenic | 40.0% |
| ! | CAATGAAGGTTTTCCCTACT+AGG | + | chr2_2:69553465-69553484 | None:intergenic | 40.0% |
| AGAGGAAACTAACAACTACG+TGG | + | chr2_2:69553853-69553872 | None:intergenic | 40.0% | |
| CTTATCGTTTCTTCTGCTAG+AGG | + | chr2_2:69553871-69553890 | None:intergenic | 40.0% | |
| GTCTCCCATATTCACAGATT+TGG | - | chr2_2:69554081-69554100 | Msa0267780:intron | 40.0% | |
| GGAGACCAAATCTGTGAATA+TGG | + | chr2_2:69554089-69554108 | None:intergenic | 40.0% | |
| ! | TTCAATCTCAAAGGCGTAAG+TGG | + | chr2_2:69554146-69554165 | None:intergenic | 40.0% |
| AGCATCTCACATTCTCACTT+GGG | + | chr2_2:69554182-69554201 | None:intergenic | 40.0% | |
| AGTTGAAACAACGGACATGA+AGG | - | chr2_2:69554524-69554543 | Msa0267780:CDS | 40.0% | |
| GTTGAAACAACGGACATGAA+GGG | - | chr2_2:69554525-69554544 | Msa0267780:CDS | 40.0% | |
| GAAGGGTTTGAAGAAGATTG+AGG | - | chr2_2:69554542-69554561 | Msa0267780:CDS | 40.0% | |
| GATGTAATGTTCAAGCTGCA+TGG | - | chr2_2:69554754-69554773 | Msa0267780:CDS | 40.0% | |
| TTGGAGCTAGACTACATTGA+CGG | - | chr2_2:69554852-69554871 | Msa0267780:intron | 40.0% | |
| TACTTGACCCTTGTGAACAG+CGG | + | chr2_2:69550620-69550639 | None:intergenic | 45.0% | |
| TCTCCCCAACGCTATTAAAC+AGG | - | chr2_2:69550799-69550818 | Msa0267780:three_prime_UTR | 45.0% | |
| CCGAACCTGTTTAATAGCGT+TGG | + | chr2_2:69550807-69550826 | None:intergenic | 45.0% | |
| CATGTGTCAAACACCTGAAC+TGG | + | chr2_2:69551199-69551218 | None:intergenic | 45.0% | |
| !! | AGCCAGAGCAAAGCATTGTA+TGG | - | chr2_2:69551463-69551482 | Msa0267780:intron | 45.0% |
| GTCCATACAATGCTTTGCTC+TGG | + | chr2_2:69551468-69551487 | None:intergenic | 45.0% | |
| TTATCCCCGGTTGCCAATTT+CGG | + | chr2_2:69551498-69551517 | None:intergenic | 45.0% | |
| GTCTCGTCTTTGATTATCCC+CGG | + | chr2_2:69551511-69551530 | None:intergenic | 45.0% | |
| ATCAAAGACGAGACCTTGAG+AGG | - | chr2_2:69551517-69551536 | Msa0267780:intron | 45.0% | |
| GATTTCAATGACTACCCTCC+AGG | + | chr2_2:69551580-69551599 | None:intergenic | 45.0% | |
| CTTATCCAACTAAGTGGGGT+TGG | + | chr2_2:69551980-69551999 | None:intergenic | 45.0% | |
| CAACCCCACTTAGTTGGATA+AGG | - | chr2_2:69551978-69551997 | Msa0267780:intron | 45.0% | |
| GGAAAAGAGCTTCACTGTCT+TGG | + | chr2_2:69552362-69552381 | None:intergenic | 45.0% | |
| GAATCCCATGTGTTCCTTGT+TGG | + | chr2_2:69552383-69552402 | None:intergenic | 45.0% | |
| ACAAGGAACACATGGGATTC+AGG | - | chr2_2:69552383-69552402 | Msa0267780:intron | 45.0% | |
| CATGGGATTCAGGTATAGCT+TGG | - | chr2_2:69552393-69552412 | Msa0267780:intron | 45.0% | |
| ! | GCAACTACCTTGAGGTTTTC+AGG | + | chr2_2:69552552-69552571 | None:intergenic | 45.0% |
| GTTATGGAGCAACTACCTTG+AGG | + | chr2_2:69552560-69552579 | None:intergenic | 45.0% | |
| GTCACAGCAGAACTGATAGA+TGG | + | chr2_2:69552927-69552946 | None:intergenic | 45.0% | |
| ATACCCCAAATAAAGGGGTG+AGG | + | chr2_2:69553047-69553066 | None:intergenic | 45.0% | |
| ! | TATACATTTGGGGTGGTCGA+TGG | - | chr2_2:69553129-69553148 | Msa0267780:CDS | 45.0% |
| ! | ATACATTTGGGGTGGTCGAT+GGG | - | chr2_2:69553130-69553149 | Msa0267780:CDS | 45.0% |
| GAGAAGCCATAGACAAGTCT+CGG | - | chr2_2:69553266-69553285 | Msa0267780:intron | 45.0% | |
| CTCTTACTGAGACTTGCCTA+TGG | + | chr2_2:69553638-69553657 | None:intergenic | 45.0% | |
| CATAGGCAAGTCTCAGTAAG+AGG | - | chr2_2:69553636-69553655 | Msa0267780:intron | 45.0% | |
| TGGAGGTGACTTTACCTAGT+AGG | - | chr2_2:69553803-69553822 | Msa0267780:intron | 45.0% | |
| GGAGGTGACTTTACCTAGTA+GGG | - | chr2_2:69553804-69553823 | Msa0267780:intron | 45.0% | |
| GGTGTGTCGTATTGCCATAT+TGG | - | chr2_2:69553942-69553961 | Msa0267780:intron | 45.0% | |
| GTAAGTGGAGAAATGGCCAT+TGG | + | chr2_2:69554131-69554150 | None:intergenic | 45.0% | |
| ! | CAAAGGCGTAAGTGGAGAAA+TGG | + | chr2_2:69554138-69554157 | None:intergenic | 45.0% |
| CAGCATCTCACATTCTCACT+TGG | + | chr2_2:69554183-69554202 | None:intergenic | 45.0% | |
| GAGAATGTGAGATGCTGATG+TGG | - | chr2_2:69554186-69554205 | Msa0267780:intron | 45.0% | |
| AGCATTTCCAAATGCACAGG+TGG | - | chr2_2:69554395-69554414 | Msa0267780:intron | 45.0% | |
| GCATTTCCAAATGCACAGGT+GGG | - | chr2_2:69554396-69554415 | Msa0267780:intron | 45.0% | |
| CATTTCCAAATGCACAGGTG+GGG | - | chr2_2:69554397-69554416 | Msa0267780:intron | 45.0% | |
| CACCAAATTGTGGCGTGTAT+GGG | - | chr2_2:69554975-69554994 | Msa0267780:five_prime_UTR | 45.0% | |
| AACCCATACACGCCACAATT+TGG | + | chr2_2:69554980-69554999 | None:intergenic | 45.0% | |
| AATTGTGGCGTGTATGGGTT+CGG | - | chr2_2:69554980-69554999 | Msa0267780:five_prime_UTR | 45.0% | |
| ! | ATTGAAGGCGTGTCCAGTTC+AGG | - | chr2_2:69551183-69551202 | Msa0267780:intron | 50.0% |
| ! | GAATGCGAATCCCCCCATTT+TGG | - | chr2_2:69551326-69551345 | Msa0267780:intron | 50.0% |
| !! | ATGGACTAGCCCACCGAAAT+TGG | - | chr2_2:69551482-69551501 | Msa0267780:intron | 50.0% |
| !! | GAACCCATTTGGGTTGGCTT+GGG | + | chr2_2:69551558-69551577 | None:intergenic | 50.0% |
| ! | AACCCAAATGGGTTCCTGGA+GGG | - | chr2_2:69551563-69551582 | Msa0267780:intron | 50.0% |
| TACCCTCCAGGAACCCATTT+GGG | + | chr2_2:69551568-69551587 | None:intergenic | 50.0% | |
| TGTAGCCAACCCCACTTAGT+TGG | - | chr2_2:69551972-69551991 | Msa0267780:intron | 50.0% | |
| AAGTTGCTCCCACCACCAAT+TGG | + | chr2_2:69552788-69552807 | None:intergenic | 50.0% | |
| TGATGTCGAGTAAGCTGTGG+AGG | - | chr2_2:69553431-69553450 | Msa0267780:intron | 50.0% | |
| TGGAGGTGACCTTACCTAGT+AGG | - | chr2_2:69553448-69553467 | Msa0267780:intron | 50.0% | |
| GGAGGTGACCTTACCTAGTA+GGG | - | chr2_2:69553449-69553468 | Msa0267780:intron | 50.0% | |
| GGTGTATGTGCAGAAGCCAT+AGG | - | chr2_2:69553619-69553638 | Msa0267780:intron | 50.0% | |
| ! | TTTTGCCCCACCTGTGCATT+TGG | + | chr2_2:69554405-69554424 | None:intergenic | 50.0% |
| TCTGCACATCCATCTACCCT+TGG | - | chr2_2:69554600-69554619 | Msa0267780:intron | 50.0% | |
| CCATACACGCCACAATTTGG+TGG | + | chr2_2:69554977-69554996 | None:intergenic | 50.0% | |
| CCACCAAATTGTGGCGTGTA+TGG | - | chr2_2:69554974-69554993 | Msa0267780:five_prime_UTR | 50.0% | |
| TTGACCCTTGTGAACAGCGG+TGG | + | chr2_2:69550617-69550636 | None:intergenic | 55.0% | |
| CCAATCCCACCATCCACTTG+CGG | - | chr2_2:69551428-69551447 | Msa0267780:intron | 55.0% | |
| CAATCCCACCATCCACTTGC+GGG | - | chr2_2:69551429-69551448 | Msa0267780:intron | 55.0% | |
| AATCCCACCATCCACTTGCG+GGG | - | chr2_2:69551430-69551449 | Msa0267780:intron | 55.0% | |
| TTTAAACGGACCCCCGCAAG+TGG | + | chr2_2:69551444-69551463 | None:intergenic | 55.0% | |
| AGCCCACCGAAATTGGCAAC+CGG | - | chr2_2:69551489-69551508 | Msa0267780:intron | 55.0% | |
| CTTGGAGTGTGCTCCTCTCA+AGG | + | chr2_2:69551533-69551552 | None:intergenic | 55.0% | |
| ! | CTTGAGAGGAGCACACTCCA+AGG | - | chr2_2:69551531-69551550 | Msa0267780:intron | 55.0% |
| !! | TTTGGGTTGGCTTGGGACCT+TGG | + | chr2_2:69551551-69551570 | None:intergenic | 55.0% |
| AGGTCCCAAGCCAACCCAAA+TGG | - | chr2_2:69551551-69551570 | Msa0267780:intron | 55.0% | |
| GGTCCCAAGCCAACCCAAAT+GGG | - | chr2_2:69551552-69551571 | Msa0267780:intron | 55.0% | |
| !! | GGAACCCATTTGGGTTGGCT+TGG | + | chr2_2:69551559-69551578 | None:intergenic | 55.0% |
| ! | AGCCAACCCAAATGGGTTCC+TGG | - | chr2_2:69551559-69551578 | Msa0267780:intron | 55.0% |
| CTCCAGGAACCCATTTGGGT+TGG | + | chr2_2:69551564-69551583 | None:intergenic | 55.0% | |
| ! | CAACCCAAATGGGTTCCTGG+AGG | - | chr2_2:69551562-69551581 | Msa0267780:intron | 55.0% |
| CTACCCTCCAGGAACCCATT+TGG | + | chr2_2:69551569-69551588 | None:intergenic | 55.0% | |
| ATAAAGGGGTGAGGCGGGAA+GGG | + | chr2_2:69553038-69553057 | None:intergenic | 55.0% | |
| AATAAAGGGGTGAGGCGGGA+AGG | + | chr2_2:69553039-69553058 | None:intergenic | 55.0% | |
| TCCCGCCTCACCCCTTTATT+TGG | - | chr2_2:69553039-69553058 | Msa0267780:intron | 55.0% | |
| CCCAAATAAAGGGGTGAGGC+GGG | + | chr2_2:69553043-69553062 | None:intergenic | 55.0% | |
| ! | CCCGCCTCACCCCTTTATTT+GGG | - | chr2_2:69553040-69553059 | Msa0267780:intron | 55.0% |
| CCCCAAATAAAGGGGTGAGG+CGG | + | chr2_2:69553044-69553063 | None:intergenic | 55.0% | |
| ! | CCGCCTCACCCCTTTATTTG+GGG | - | chr2_2:69553041-69553060 | Msa0267780:intron | 55.0% |
| AGCCACCACCGCTGTTCACA+AGG | - | chr2_2:69550609-69550628 | Msa0267780:three_prime_UTR | 60.0% | |
| GCCACCACCGCTGTTCACAA+GGG | - | chr2_2:69550610-69550629 | Msa0267780:three_prime_UTR | 60.0% | |
| ACCCTTGTGAACAGCGGTGG+TGG | + | chr2_2:69550614-69550633 | None:intergenic | 60.0% | |
| !! | CCGCAAGTGGATGGTGGGAT+TGG | + | chr2_2:69551431-69551450 | None:intergenic | 60.0% |
| ATCCCACCATCCACTTGCGG+GGG | - | chr2_2:69551431-69551450 | Msa0267780:intron | 60.0% | |
| GCCCACCGAAATTGGCAACC+GGG | - | chr2_2:69551490-69551509 | Msa0267780:intron | 60.0% | |
| CCCCGGTTGCCAATTTCGGT+GGG | + | chr2_2:69551494-69551513 | None:intergenic | 60.0% | |
| CCCACCGAAATTGGCAACCG+GGG | - | chr2_2:69551491-69551510 | Msa0267780:intron | 60.0% | |
| TCCCCGGTTGCCAATTTCGG+TGG | + | chr2_2:69551495-69551514 | None:intergenic | 60.0% | |
| GCGAGCGAGCGAGCAATGTC+TGG | - | chr2_2:69550580-69550599 | Msa0267780:three_prime_UTR | 65.0% | |
| GACCCCCGCAAGTGGATGGT+GGG | + | chr2_2:69551436-69551455 | None:intergenic | 65.0% | |
| AACGGACCCCCGCAAGTGGA+TGG | + | chr2_2:69551440-69551459 | None:intergenic | 65.0% | |
| GGCGGGAAGGGAGGGGAAAA+CGG | + | chr2_2:69553026-69553045 | None:intergenic | 65.0% | |
| GGACCCCCGCAAGTGGATGG+TGG | + | chr2_2:69551437-69551456 | None:intergenic | 70.0% | |
| AGGGGTGAGGCGGGAAGGGA+GGG | + | chr2_2:69553034-69553053 | None:intergenic | 70.0% | |
| AAGGGGTGAGGCGGGAAGGG+AGG | + | chr2_2:69553035-69553054 | None:intergenic | 70.0% | |
| GGGGTGAGGCGGGAAGGGAG+GGG | + | chr2_2:69553033-69553052 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 69550501 | 69555028 | 69550501 | ID=Msa0267780;Name=Msa0267780 |
| chr2_2 | mRNA | 69550501 | 69555028 | 69550501 | ID=Msa0267780-mRNA-1;Parent=Msa0267780;Name=Msa0267780-mRNA-1;_AED=0.10;_eAED=0.10;_QI=94|1|1|1|1|1|8|456|177 |
| chr2_2 | exon | 69550501 | 69551005 | 69550501 | ID=Msa0267780-mRNA-1:exon:22185;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69552618 | 69552695 | 69552618 | ID=Msa0267780-mRNA-1:exon:22184;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69552799 | 69552845 | 69552799 | ID=Msa0267780-mRNA-1:exon:22183;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69552966 | 69553023 | 69552966 | ID=Msa0267780-mRNA-1:exon:22182;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69553125 | 69553173 | 69553125 | ID=Msa0267780-mRNA-1:exon:22181;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69554485 | 69554608 | 69554485 | ID=Msa0267780-mRNA-1:exon:22180;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69554709 | 69554795 | 69554709 | ID=Msa0267780-mRNA-1:exon:22179;Parent=Msa0267780-mRNA-1 |
| chr2_2 | exon | 69554893 | 69555028 | 69554893 | ID=Msa0267780-mRNA-1:exon:22178;Parent=Msa0267780-mRNA-1 |
| chr2_2 | five_prime_UTR | 69554935 | 69555028 | 69554935 | ID=Msa0267780-mRNA-1:five_prime_utr;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69554893 | 69554934 | 69554893 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69554709 | 69554795 | 69554709 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69554485 | 69554608 | 69554485 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69553125 | 69553173 | 69553125 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69552966 | 69553023 | 69552966 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69552799 | 69552845 | 69552799 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69552618 | 69552695 | 69552618 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | CDS | 69550957 | 69551005 | 69550957 | ID=Msa0267780-mRNA-1:cds;Parent=Msa0267780-mRNA-1 |
| chr2_2 | three_prime_UTR | 69550501 | 69550956 | 69550501 | ID=Msa0267780-mRNA-1:three_prime_utr;Parent=Msa0267780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
