Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005840 | Msa0481750 | 0.811357 | 7.288983e-51 | -8.615850e-47 |
| Msa0016540 | Msa0481750 | 0.801302 | 9.601296e-49 | -8.615850e-47 |
| Msa0030300 | Msa0481750 | 0.813351 | 2.674652e-51 | -8.615850e-47 |
| Msa0031820 | Msa0481750 | 0.835472 | 1.644802e-56 | -8.615850e-47 |
| Msa0033880 | Msa0481750 | 0.807108 | 5.937918e-50 | -8.615850e-47 |
| Msa0037160 | Msa0481750 | 0.860363 | 2.175735e-63 | -8.615850e-47 |
| Msa0040690 | Msa0481750 | 0.817085 | 3.958424e-52 | -8.615850e-47 |
| Msa0041720 | Msa0481750 | 0.804932 | 1.703691e-49 | -8.615850e-47 |
| Msa0043500 | Msa0481750 | 0.832659 | 8.333868e-56 | -8.615850e-47 |
| Msa0043650 | Msa0481750 | 0.820617 | 6.240029e-53 | -8.615850e-47 |
| Msa0054440 | Msa0481750 | 0.813972 | 1.952544e-51 | -8.615850e-47 |
| Msa0054820 | Msa0481750 | 0.805576 | 1.248571e-49 | -8.615850e-47 |
| Msa0056450 | Msa0481750 | 0.808879 | 2.493419e-50 | -8.615850e-47 |
| Msa0070170 | Msa0481750 | 0.819560 | 1.089471e-52 | -8.615850e-47 |
| Msa0079110 | Msa0481750 | 0.810671 | 1.026529e-50 | -8.615850e-47 |
| Msa0093850 | Msa0481750 | 0.823745 | 1.173639e-53 | -8.615850e-47 |
| Msa0097950 | Msa0481750 | 0.818622 | 1.780657e-52 | -8.615850e-47 |
| Msa0098470 | Msa0481750 | 0.803333 | 3.665597e-49 | -8.615850e-47 |
| Msa0100160 | Msa0481750 | 0.810740 | 9.917265e-51 | -8.615850e-47 |
| Msa0108390 | Msa0481750 | 0.836835 | 7.412852e-57 | -8.615850e-47 |
| Msa0108410 | Msa0481750 | 0.800261 | 1.565563e-48 | -8.615850e-47 |
| Msa0108870 | Msa0481750 | 0.808862 | 2.513609e-50 | -8.615850e-47 |
| Msa0125650 | Msa0481750 | 0.808504 | 2.998840e-50 | -8.615850e-47 |
| Msa0126360 | Msa0481750 | 0.821048 | 4.965200e-53 | -8.615850e-47 |
| Msa0126770 | Msa0481750 | 0.817681 | 2.906697e-52 | -8.615850e-47 |
| Msa0127850 | Msa0481750 | 0.807695 | 4.458306e-50 | -8.615850e-47 |
| Msa0135420 | Msa0481750 | 0.802505 | 5.434979e-49 | -8.615850e-47 |
| Msa0138360 | Msa0481750 | 0.834482 | 2.921278e-56 | -8.615850e-47 |
| Msa0146770 | Msa0481750 | 0.826836 | 2.179779e-54 | -8.615850e-47 |
| Msa0147980 | Msa0481750 | 0.816303 | 5.927482e-52 | -8.615850e-47 |
| Msa0154440 | Msa0481750 | 0.805385 | 1.369489e-49 | -8.615850e-47 |
| Msa0155330 | Msa0481750 | 0.801599 | 8.345059e-49 | -8.615850e-47 |
| Msa0171850 | Msa0481750 | 0.818221 | 2.194466e-52 | -8.615850e-47 |
| Msa0174000 | Msa0481750 | 0.801270 | 9.744849e-49 | -8.615850e-47 |
| Msa0177210 | Msa0481750 | 0.838057 | 3.605475e-57 | -8.615850e-47 |
| Msa0180790 | Msa0481750 | -0.815264 | 1.010486e-51 | -8.615850e-47 |
| Msa0181230 | Msa0481750 | 0.807815 | 4.203946e-50 | -8.615850e-47 |
| Msa0189300 | Msa0481750 | 0.823163 | 1.605488e-53 | -8.615850e-47 |
| Msa0198520 | Msa0481750 | 0.825150 | 5.482331e-54 | -8.615850e-47 |
| Msa0198530 | Msa0481750 | 0.837160 | 6.122709e-57 | -8.615850e-47 |
| Msa0202410 | Msa0481750 | 0.817894 | 2.602313e-52 | -8.615850e-47 |
| Msa0205010 | Msa0481750 | 0.821468 | 3.972953e-53 | -8.615850e-47 |
| Msa0229170 | Msa0481750 | 0.820911 | 5.341860e-53 | -8.615850e-47 |
| Msa0231660 | Msa0481750 | 0.828674 | 7.884814e-55 | -8.615850e-47 |
| Msa0365100 | Msa0481750 | 0.820573 | 6.386847e-53 | -8.615850e-47 |
| Msa0378720 | Msa0481750 | 0.803420 | 3.515757e-49 | -8.615850e-47 |
| Msa0378970 | Msa0481750 | 0.834141 | 3.557953e-56 | -8.615850e-47 |
| Msa0403660 | Msa0481750 | 0.828084 | 1.094054e-54 | -8.615850e-47 |
| Msa0427120 | Msa0481750 | 0.806810 | 6.863917e-50 | -8.615850e-47 |
| Msa0428580 | Msa0481750 | 0.805687 | 1.183452e-49 | -8.615850e-47 |
| Msa0440440 | Msa0481750 | 0.800091 | 1.695336e-48 | -8.615850e-47 |
| Msa0474590 | Msa0481750 | 0.802015 | 6.856414e-49 | -8.615850e-47 |
| Msa0474940 | Msa0481750 | 0.810917 | 9.083117e-51 | -8.615850e-47 |
| Msa0479170 | Msa0481750 | 0.827876 | 1.227584e-54 | -8.615850e-47 |
| Msa0479200 | Msa0481750 | 0.846805 | 1.724327e-59 | -8.615850e-47 |
| Msa0480780 | Msa0481750 | 0.814650 | 1.383166e-51 | -8.615850e-47 |
| Msa0481750 | Msa0485240 | 0.816181 | 6.312247e-52 | -8.615850e-47 |
| Msa0481750 | Msa0510930 | 0.826194 | 3.100877e-54 | -8.615850e-47 |
| Msa0481750 | Msa0518030 | 0.831330 | 1.774641e-55 | -8.615850e-47 |
| Msa0481750 | Msa0518440 | 0.809447 | 1.884008e-50 | -8.615850e-47 |
| Msa0481750 | Msa0527190 | 0.822618 | 2.150976e-53 | -8.615850e-47 |
| Msa0481750 | Msa0532980 | 0.803857 | 2.853233e-49 | -8.615850e-47 |
| Msa0481750 | Msa0545060 | 0.805269 | 1.448353e-49 | -8.615850e-47 |
| Msa0481750 | Msa0546570 | 0.805074 | 1.591108e-49 | -8.615850e-47 |
| Msa0481750 | Msa0550540 | 0.803294 | 3.733378e-49 | -8.615850e-47 |
| Msa0481750 | Msa0550570 | 0.806023 | 1.006213e-49 | -8.615850e-47 |
| Msa0481750 | Msa0557070 | 0.807568 | 4.744412e-50 | -8.615850e-47 |
| Msa0481750 | Msa0572840 | 0.805410 | 1.353101e-49 | -8.615850e-47 |
| Msa0481750 | Msa0574390 | 0.822816 | 1.934718e-53 | -8.615850e-47 |
| Msa0481750 | Msa0576680 | 0.818632 | 1.771309e-52 | -8.615850e-47 |
| Msa0481750 | Msa0581280 | 0.830318 | 3.141842e-55 | -8.615850e-47 |
| Msa0481750 | Msa0584550 | 0.802567 | 5.275900e-49 | -8.615850e-47 |
| Msa0481750 | Msa0585560 | 0.803604 | 3.220246e-49 | -8.615850e-47 |
| Msa0481750 | Msa0600600 | 0.813553 | 2.415390e-51 | -8.615850e-47 |
| Msa0481750 | Msa0601150 | 0.812944 | 3.284829e-51 | -8.615850e-47 |
| Msa0481750 | Msa0603670 | 0.809800 | 1.581812e-50 | -8.615850e-47 |
| Msa0481750 | Msa0618950 | 0.802603 | 5.187933e-49 | -8.615850e-47 |
| Msa0481750 | Msa0620620 | 0.811521 | 6.715931e-51 | -8.615850e-47 |
| Msa0481750 | Msa0641140 | 0.803583 | 3.253227e-49 | -8.615850e-47 |
| Msa0481750 | Msa0652690 | 0.810932 | 9.014932e-51 | -8.615850e-47 |
| Msa0481750 | Msa0658590 | 0.809990 | 1.439893e-50 | -8.615850e-47 |
| Msa0481750 | Msa0667770 | 0.811400 | 7.134602e-51 | -8.615850e-47 |
| Msa0481750 | Msa0667790 | 0.812362 | 4.403818e-51 | -8.615850e-47 |
| Msa0481750 | Msa0682090 | 0.801006 | 1.103747e-48 | -8.615850e-47 |
| Msa0481750 | Msa0698800 | 0.810205 | 1.294119e-50 | -8.615850e-47 |
| Msa0481750 | Msa0704660 | 0.814894 | 1.221048e-51 | -8.615850e-47 |
| Msa0481750 | Msa0706400 | 0.801759 | 7.737284e-49 | -8.615850e-47 |
| Msa0481750 | Msa0707250 | 0.814423 | 1.552814e-51 | -8.615850e-47 |
| Msa0481750 | Msa0711430 | 0.824471 | 7.929484e-54 | -8.615850e-47 |
| Msa0481750 | Msa0716410 | 0.800622 | 1.322180e-48 | -8.615850e-47 |
| Msa0481750 | Msa0737570 | 0.801979 | 6.971824e-49 | -8.615850e-47 |
| Msa0481750 | Msa0737730 | 0.805002 | 1.646813e-49 | -8.615850e-47 |
| Msa0481750 | Msa0744100 | 0.814424 | 1.551524e-51 | -8.615850e-47 |
| Msa0481750 | Msa0751260 | 0.800349 | 1.502454e-48 | -8.615850e-47 |
| Msa0481750 | Msa0786750 | 0.812297 | 4.551238e-51 | -8.615850e-47 |
| Msa0481750 | Msa0805450 | 0.812950 | 3.275357e-51 | -8.615850e-47 |
| Msa0481750 | Msa0811520 | 0.808049 | 3.748953e-50 | -8.615850e-47 |
| Msa0481750 | Msa0819060 | 0.800703 | 1.272680e-48 | -8.615850e-47 |
| Msa0481750 | Msa0822500 | 0.805794 | 1.123743e-49 | -8.615850e-47 |
| Msa0481750 | Msa0825270 | 0.806657 | 7.395417e-50 | -8.615850e-47 |
| Msa0481750 | Msa0830390 | 0.824417 | 8.164632e-54 | -8.615850e-47 |
| Msa0481750 | Msa0832120 | 0.827780 | 1.295200e-54 | -8.615850e-47 |
| Msa0481750 | Msa0851730 | 0.812160 | 4.876259e-51 | -8.615850e-47 |
| Msa0481750 | Msa0856920 | 0.803604 | 3.220246e-49 | -8.615850e-47 |
| Msa0481750 | Msa0865570 | 0.800448 | 1.434552e-48 | -8.615850e-47 |
| Msa0481750 | Msa0868160 | 0.800307 | 1.532647e-48 | -8.615850e-47 |
| Msa0481750 | Msa0878510 | 0.813457 | 2.535230e-51 | -8.615850e-47 |
| Msa0481750 | Msa0890550 | 0.800084 | 1.701185e-48 | -8.615850e-47 |
| Msa0481750 | Msa0925770 | 0.806460 | 8.137729e-50 | -8.615850e-47 |
| Msa0481750 | Msa0926470 | 0.832565 | 8.789532e-56 | -8.615850e-47 |
| Msa0481750 | Msa0944200 | 0.803487 | 3.405479e-49 | -8.615850e-47 |
| Msa0481750 | Msa0945240 | 0.817227 | 3.677974e-52 | -8.615850e-47 |
| Msa0481750 | Msa1006840 | 0.804183 | 2.440664e-49 | -8.615850e-47 |
| Msa0481750 | Msa1029970 | 0.809024 | 2.321661e-50 | -8.615850e-47 |
| Msa0481750 | Msa1031930 | 0.823479 | 1.354949e-53 | -8.615850e-47 |
| Msa0481750 | Msa1034500 | 0.835383 | 1.732669e-56 | -8.615850e-47 |
| Msa0481750 | Msa1038080 | 0.821996 | 2.999564e-53 | -8.615850e-47 |
| Msa0481750 | Msa1040840 | 0.803940 | 2.741983e-49 | -8.615850e-47 |
| Msa0481750 | Msa1041210 | 0.841537 | 4.475759e-58 | -8.615850e-47 |
| Msa0481750 | Msa1041520 | 0.821396 | 4.129766e-53 | -8.615850e-47 |
| Msa0481750 | Msa1080640 | 0.909698 | 4.272540e-82 | -8.615850e-47 |
| Msa0481750 | Msa1081560 | 0.809176 | 2.153496e-50 | -8.615850e-47 |
| Msa0481750 | Msa1089450 | 0.820609 | 6.265017e-53 | -8.615850e-47 |
| Msa0481750 | Msa1093330 | 0.801848 | 7.418410e-49 | -8.615850e-47 |
| Msa0481750 | Msa1118940 | 0.829829 | 4.135914e-55 | -8.615850e-47 |
| Msa0481750 | Msa1126450 | 0.927711 | 8.029124e-92 | -8.615850e-47 |
| Msa0481750 | Msa1129690 | 0.805087 | 1.580810e-49 | -8.615850e-47 |
| Msa0481750 | Msa1133400 | 0.805119 | 1.556728e-49 | -8.615850e-47 |
| Msa0481750 | Msa1135890 | 0.813692 | 2.250120e-51 | -8.615850e-47 |
| Msa0481750 | Msa1145810 | 0.814765 | 1.303794e-51 | -8.615850e-47 |
| Msa0481750 | Msa1156160 | 0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa0481750 | Msa1160310 | 0.805115 | 1.559938e-49 | -8.615850e-47 |
| Msa0481750 | Msa1163540 | 0.817844 | 2.671234e-52 | -8.615850e-47 |
| Msa0481750 | Msa1163580 | 0.801725 | 7.863084e-49 | -8.615850e-47 |
| Msa0481750 | Msa1165740 | 0.832534 | 8.948969e-56 | -8.615850e-47 |
| Msa0481750 | Msa1178060 | 0.809080 | 2.257680e-50 | -8.615850e-47 |
| Msa0481750 | Msa1179630 | 0.813927 | 1.998011e-51 | -8.615850e-47 |
| Msa0481750 | Msa1179980 | 0.801186 | 1.013891e-48 | -8.615850e-47 |
| Msa0481750 | Msa1206310 | 0.832777 | 7.789522e-56 | -8.615850e-47 |
| Msa0481750 | Msa1206360 | 0.810558 | 1.086081e-50 | -8.615850e-47 |
| Msa0481750 | Msa1209200 | 0.826540 | 2.564406e-54 | -8.615850e-47 |
| Msa0481750 | Msa1216260 | 0.801298 | 9.616542e-49 | -8.615850e-47 |
| Msa0481750 | Msa1217310 | 0.801896 | 7.251459e-49 | -8.615850e-47 |
| Msa0481750 | Msa1218450 | 0.836641 | 8.307494e-57 | -8.615850e-47 |
| Msa0481750 | Msa1219000 | 0.813663 | 2.284368e-51 | -8.615850e-47 |
| Msa0481750 | Msa1223330 | 0.827376 | 1.618490e-54 | -8.615850e-47 |
| Msa0481750 | Msa1226470 | 0.816042 | 6.781997e-52 | -8.615850e-47 |
| Msa0481750 | Msa1269890 | 0.818170 | 2.254306e-52 | -8.615850e-47 |
| Msa0481750 | Msa1269970 | 0.803153 | 3.992999e-49 | -8.615850e-47 |
| Msa0481750 | Msa1278900 | 0.811643 | 6.317566e-51 | -8.615850e-47 |
| Msa0481750 | Msa1284900 | 0.809207 | 2.120407e-50 | -8.615850e-47 |
| Msa0481750 | Msa1332760 | 0.808959 | 2.397317e-50 | -8.615850e-47 |
| Msa0481750 | Msa1333970 | 0.819332 | 1.227658e-52 | -8.615850e-47 |
| Msa0481750 | Msa1346840 | 0.814132 | 1.800163e-51 | -8.615850e-47 |
| Msa0481750 | Msa1359560 | 0.826492 | 2.633071e-54 | -8.615850e-47 |
| Msa0481750 | Msa1360980 | 0.852814 | 3.606186e-61 | -8.615850e-47 |
| Msa0481750 | Msa1366600 | 0.812031 | 5.202108e-51 | -8.615850e-47 |
| Msa0481750 | Msa1370620 | 0.819210 | 1.308893e-52 | -8.615850e-47 |
| Msa0481750 | Msa1371520 | 0.822939 | 1.810774e-53 | -8.615850e-47 |
| Msa0481750 | Msa1373980 | 0.826593 | 2.491871e-54 | -8.615850e-47 |
| Msa0481750 | Msa1376170 | 0.861270 | 1.154400e-63 | -8.615850e-47 |
| Msa0481750 | Msa1383230 | 0.801052 | 1.080137e-48 | -8.615850e-47 |
| Msa0481750 | Msa1385890 | 0.812692 | 3.730493e-51 | -8.615850e-47 |
| Msa0481750 | Msa1389850 | 0.813845 | 2.082677e-51 | -8.615850e-47 |
| Msa0481750 | Msa1389880 | 0.813949 | 1.975060e-51 | -8.615850e-47 |
| Msa0481750 | Msa1393570 | 0.812901 | 3.356712e-51 | -8.615850e-47 |
| Msa0481750 | Msa1407190 | 0.840477 | 8.492977e-58 | -8.615850e-47 |
| Msa0481750 | Msa1410420 | 0.808846 | 2.533450e-50 | -8.615850e-47 |
| Msa0481750 | Msa1411100 | 0.805016 | 1.636225e-49 | -8.615850e-47 |
| Msa0481750 | Msa1418240 | 0.814449 | 1.531751e-51 | -8.615850e-47 |
| Msa0481750 | Msa1423350 | 0.812058 | 5.130705e-51 | -8.615850e-47 |
| Msa0481750 | Msa1425880 | 0.812433 | 4.250332e-51 | -8.615850e-47 |
| Msa0481750 | Msa1432130 | 0.835485 | 1.632786e-56 | -8.615850e-47 |
| Msa0481750 | Msa1440310 | 0.853022 | 3.145058e-61 | -8.615850e-47 |
| Msa0481750 | Msa1441580 | 0.816549 | 5.222753e-52 | -8.615850e-47 |
| Msa0481750 | Msa1446780 | 0.801091 | 1.060138e-48 | -8.615850e-47 |
| Msa0481750 | Msa1454530 | 0.808753 | 2.652409e-50 | -8.615850e-47 |
| Msa0481750 | Msa1463900 | 0.807195 | 5.691568e-50 | -8.615850e-47 |
| Msa0240900 | Msa0481750 | 0.807325 | 5.342498e-50 | -8.615850e-47 |
| Msa0241140 | Msa0481750 | 0.817953 | 2.523412e-52 | -8.615850e-47 |
| Msa0245430 | Msa0481750 | 0.815492 | 8.991475e-52 | -8.615850e-47 |
| Msa0257520 | Msa0481750 | 0.802724 | 4.896801e-49 | -8.615850e-47 |
| Msa0264530 | Msa0481750 | 0.813280 | 2.772524e-51 | -8.615850e-47 |
| Msa0266350 | Msa0481750 | 0.820295 | 7.398914e-53 | -8.615850e-47 |
| Msa0267780 | Msa0481750 | 0.809071 | 2.267517e-50 | -8.615850e-47 |
| Msa0278790 | Msa0481750 | 0.843531 | 1.323577e-58 | -8.615850e-47 |
| Msa0279240 | Msa0481750 | 0.802736 | 4.869977e-49 | -8.615850e-47 |
| Msa0281430 | Msa0481750 | 0.811898 | 5.561406e-51 | -8.615850e-47 |
| Msa0292120 | Msa0481750 | 0.807517 | 4.862671e-50 | -8.615850e-47 |
| Msa0309770 | Msa0481750 | 0.825680 | 4.107721e-54 | -8.615850e-47 |
| Msa0315690 | Msa0481750 | 0.803743 | 3.013970e-49 | -8.615850e-47 |
| Msa0317970 | Msa0481750 | 0.824917 | 6.225163e-54 | -8.615850e-47 |
| Msa0318720 | Msa0481750 | 0.825515 | 4.495652e-54 | -8.615850e-47 |
| Msa0322240 | Msa0481750 | 0.813501 | 2.479280e-51 | -8.615850e-47 |
| Msa0339910 | Msa0481750 | 0.801167 | 1.023075e-48 | -8.615850e-47 |
| Msa0341690 | Msa0481750 | 0.836102 | 1.139096e-56 | -8.615850e-47 |
| Msa0342010 | Msa0481750 | 0.829016 | 6.514953e-55 | -8.615850e-47 |
| Msa0357900 | Msa0481750 | 0.800279 | 1.552680e-48 | -8.615850e-47 |
| Msa0361140 | Msa0481750 | 0.802595 | 5.207806e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 125 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATTCAAATGAATTGTT+TGG | 0.265901 | 3_3:-88105601 | Msa0481750:five_prime_UTR |
| GCTAGAAAACTTGAGATAAA+AGG | 0.282546 | 3_3:+88101140 | None:intergenic |
| GTTCCTGTTATTGCAGATCT+TGG | 0.304464 | 3_3:-88105147 | Msa0481750:intron |
| CCCAATTAGGCACTTGCTTT+GGG | 0.305358 | 3_3:-88103113 | Msa0481750:intron |
| CCCAATTAGGCACTTGCTTT+GGG | 0.305358 | 3_3:-88103309 | Msa0481750:intron |
| AGTAAGTTTCATGTTGTCTA+TGG | 0.309757 | 3_3:+88105441 | None:intergenic |
| GCCCAATTAGGCACTTGCTT+TGG | 0.322357 | 3_3:-88103114 | Msa0481750:intron |
| GCCCAATTAGGCACTTGCTT+TGG | 0.322357 | 3_3:-88103310 | Msa0481750:intron |
| AAGGCTGCCCAAGGCTGGTT+TGG | 0.323136 | 3_3:+88101329 | None:intergenic |
| TTCATTCAAATGAATTGTTT+GGG | 0.330603 | 3_3:-88105600 | Msa0481750:five_prime_UTR |
| GGCACTTGCTTTGGGAGATC+AGG | 0.334429 | 3_3:-88103105 | Msa0481750:CDS |
| GGCACTTGCTTTGGGAGATC+AGG | 0.334429 | 3_3:-88103301 | Msa0481750:CDS |
| GCTTTCAACACAATATTGTT+TGG | 0.335248 | 3_3:-88105578 | Msa0481750:five_prime_UTR |
| TTGTTTCATGAATTGCCTTT+TGG | 0.339837 | 3_3:-88101273 | Msa0481750:three_prime_UTR |
| ATGATCCACATCCACAAATA+TGG | 0.340272 | 3_3:+88101399 | None:intergenic |
| GGGGCTGCCAAGACTGTAGT+GGG | 0.349111 | 3_3:-88104653 | Msa0481750:CDS |
| AGATCTGTTATTGCAGATCT+TGG | 0.351963 | 3_3:-88105188 | Msa0481750:CDS |
| CTCAAGGAAAATCGTATCTA+AGG | 0.357147 | 3_3:-88104099 | Msa0481750:CDS |
| TCATCTGTAGCCATGCTTGC+AGG | 0.369312 | 3_3:+88103267 | None:intergenic |
| CTTTCAACACAATATTGTTT+GGG | 0.372295 | 3_3:-88105577 | Msa0481750:five_prime_UTR |
| GCTTCTAAATGTAGCCTCAT+TGG | 0.379793 | 3_3:-88104275 | Msa0481750:intron |
| TCATCTGTAGCCATGCTTGC+AGG | 0.387125 | 3_3:+88103462 | None:intergenic |
| GGCTGCCAAGACTGTAGTGG+GGG | 0.390292 | 3_3:-88104651 | Msa0481750:CDS |
| AACACAGTTCAGAGGGCGCC+AGG | 0.390682 | 3_3:+88101102 | None:intergenic |
| ATCGGGCTGTCGAGGCTTAT+AGG | 0.393390 | 3_3:-88104133 | Msa0481750:CDS |
| AGTTTGCATCTTTGTTTAAG+TGG | 0.398316 | 3_3:+88101030 | None:intergenic |
| TTGGACGCGGATATTGTATT+GGG | 0.404574 | 3_3:+88105554 | None:intergenic |
| AAGATCCGATTCCGCTCTAT+AGG | 0.405390 | 3_3:-88105525 | Msa0481750:five_prime_UTR |
| AAACCAAGATCTGCAATAAC+AGG | 0.407273 | 3_3:+88105144 | None:intergenic |
| GGTTGCTTAAAGTCTGGTTA+TGG | 0.409173 | 3_3:+88102973 | None:intergenic |
| CTGTCGATTGACAAGAAAAC+TGG | 0.416287 | 3_3:-88104066 | Msa0481750:CDS |
| CTGTCGATTGACAAGAAAAC+TGG | 0.416287 | 3_3:+88105366 | None:intergenic |
| TTGAACGTTAACATTGTTCA+AGG | 0.416538 | 3_3:+88101310 | None:intergenic |
| ATTGGACGCGGATATTGTAT+TGG | 0.418785 | 3_3:+88105553 | None:intergenic |
| ACATCCACAAATATGGCATC+AGG | 0.420855 | 3_3:+88101406 | None:intergenic |
| ACCATGGGAGATATGTTCAT+TGG | 0.420881 | 3_3:-88101369 | Msa0481750:CDS |
| TGGATGTTTGAGTCCTTGTA+TGG | 0.427317 | 3_3:-88101253 | Msa0481750:three_prime_UTR |
| GGGCTGCCAAGACTGTAGTG+GGG | 0.430289 | 3_3:-88104652 | Msa0481750:CDS |
| GCTACTGCCAAGACTGCACT+GGG | 0.431898 | 3_3:-88104674 | Msa0481750:CDS |
| CAGACTTTAAGCAACCTCTA+TGG | 0.433770 | 3_3:-88102966 | Msa0481750:CDS |
| TTGCAAATTATCGTGTAGTA+AGG | 0.436109 | 3_3:+88103007 | None:intergenic |
| GTTCTTTCAAAGAAGGAGAA+AGG | 0.437069 | 3_3:+88105793 | None:intergenic |
| CATAGAGGTTGCTTAAAGTC+TGG | 0.443079 | 3_3:+88102967 | None:intergenic |
| AAAGGAGGAGAAAGGATGTT+GGG | 0.446270 | 3_3:+88105752 | None:intergenic |
| GTTCTTTAACCAGGGTGATC+GGG | 0.447646 | 3_3:-88104150 | Msa0481750:intron |
| TGCTGTGGTTCGGAAAGTTA+TGG | 0.448779 | 3_3:-88101518 | Msa0481750:CDS |
| AACTTACTCCTAATCTTGTA+AGG | 0.449123 | 3_3:+88104002 | None:intergenic |
| AACTTACTCCTAATCTTGTA+AGG | 0.449123 | 3_3:-88105426 | Msa0481750:CDS |
| TGAATGATCCAAACCAGCCT+TGG | 0.449389 | 3_3:-88101337 | Msa0481750:three_prime_UTR |
| TGTTCTTTAACCAGGGTGAT+CGG | 0.449896 | 3_3:-88104151 | Msa0481750:intron |
| GTTCTTTAACCAAGGTGATC+GGG | 0.451825 | 3_3:+88105333 | None:intergenic |
| GTTTGCATCTTTGTTTAAGT+GGG | 0.452402 | 3_3:+88101031 | None:intergenic |
| AAAGAAGGAGAAAGGATGTT+GGG | 0.453170 | 3_3:+88105801 | None:intergenic |
| CCGCTCCTATAGAGCGGAAT+CGG | 0.463429 | 3_3:+88105520 | None:intergenic |
| TTGGGAGATCAGGGTGCTGA+GGG | 0.469726 | 3_3:-88103095 | Msa0481750:CDS |
| ATTCTTTCAAAGGAGGAGAA+AGG | 0.472113 | 3_3:+88105744 | None:intergenic |
| TGCTGAGGAGCCTGCAAGCA+TGG | 0.472976 | 3_3:-88103277 | Msa0481750:CDS |
| GAATGATCCAAACCAGCCTT+GGG | 0.477059 | 3_3:-88101336 | Msa0481750:three_prime_UTR |
| TGTTCAAGGCTGCCCAAGGC+TGG | 0.477332 | 3_3:+88101324 | None:intergenic |
| CCGAACCACAGCAGTACTCT+TGG | 0.477785 | 3_3:+88101528 | None:intergenic |
| TTTGGCAGGGTTTAAGAGGA+AGG | 0.479372 | 3_3:-88103514 | Msa0481750:intron |
| ACGATAATTTGCAAGAATTG+AGG | 0.484412 | 3_3:-88102998 | Msa0481750:CDS |
| GGCTACTGCCAAGACTGCAC+TGG | 0.484854 | 3_3:-88104675 | Msa0481750:CDS |
| TGTTCTTTAACCAAGGTGAT+CGG | 0.484941 | 3_3:+88105332 | None:intergenic |
| GCTGTGGTTCGGAAAGTTAT+GGG | 0.485733 | 3_3:-88101517 | Msa0481750:CDS |
| GATCACCTTGGTTAAAGAAC+AGG | 0.486086 | 3_3:-88105330 | Msa0481750:intron |
| GCACTTGCTTTGGGAGATCA+GGG | 0.489295 | 3_3:-88103104 | Msa0481750:CDS |
| GCACTTGCTTTGGGAGATCA+GGG | 0.489295 | 3_3:-88103300 | Msa0481750:CDS |
| AGAGCGGAATCGGATCTTTG+TGG | 0.496543 | 3_3:+88105530 | None:intergenic |
| TACTTAGGATGATGTTGCTG+TGG | 0.498806 | 3_3:-88104732 | Msa0481750:intron |
| CCAGGGTGATCGGGCTGTCG+AGG | 0.499757 | 3_3:-88104141 | Msa0481750:intron |
| ATACCCTGATGCCATATTTG+TGG | 0.500174 | 3_3:-88101410 | Msa0481750:CDS |
| TGATGCCATATTTGTGGATG+TGG | 0.502868 | 3_3:-88101404 | Msa0481750:CDS |
| TGGCAGGGTTTAAGAGGAAG+GGG | 0.506765 | 3_3:-88103512 | Msa0481750:intron |
| TTTGGGGCTTGATGTGGAGA+TGG | 0.517170 | 3_3:-88103060 | Msa0481750:CDS |
| CAAAGAAGGAGAAAGGATGT+TGG | 0.517385 | 3_3:+88105800 | None:intergenic |
| AATTATCGTGTAGTAAGGTC+AGG | 0.520177 | 3_3:+88103012 | None:intergenic |
| AGGTCATTAAAATCTGCAAA+TGG | 0.520606 | 3_3:+88103032 | None:intergenic |
| CAAGGACTCAAACATCCAAA+AGG | 0.523797 | 3_3:+88101258 | None:intergenic |
| GTTAAGAAAACACAGTTCAG+AGG | 0.526834 | 3_3:+88101094 | None:intergenic |
| TTGACAAGAAAACTGGCTAC+TGG | 0.527466 | 3_3:-88104059 | Msa0481750:CDS |
| TCCCATCTTCGTCTCAAAAG+TGG | 0.527558 | 3_3:-88101062 | Msa0481750:three_prime_UTR |
| CGATTCCGCTCTATAGGAGC+GGG | 0.529232 | 3_3:-88105519 | Msa0481750:five_prime_UTR |
| TCTTACCTGTTCTTTAACCA+AGG | 0.529640 | 3_3:+88105325 | None:intergenic |
| GCTGCCAAGACTGTAGTGGG+GGG | 0.532385 | 3_3:-88104650 | Msa0481750:intron |
| CCAAGAGTACTGCTGTGGTT+CGG | 0.534633 | 3_3:-88101528 | Msa0481750:CDS |
| TTGGCAGGGTTTAAGAGGAA+GGG | 0.538562 | 3_3:-88103513 | Msa0481750:intron |
| TTTGGGAGATCAGGGTGCTG+AGG | 0.543639 | 3_3:-88103096 | Msa0481750:CDS |
| TACTGCCAAGACTGCACTGG+GGG | 0.545287 | 3_3:-88104672 | Msa0481750:CDS |
| AGCTCTTATCTAATCCGCCC+TGG | 0.547269 | 3_3:-88101120 | Msa0481750:three_prime_UTR |
| TTGACAAGAAAACTGGCTAC+TGG | 0.548510 | 3_3:+88105373 | None:intergenic |
| ATAGGCAGAAAGAGCGCTCA+AGG | 0.550175 | 3_3:-88104115 | Msa0481750:CDS |
| TACTGGTAGAAAGCTCATGC+TGG | 0.553457 | 3_3:+88105390 | None:intergenic |
| CAAAGGAGGAGAAAGGATGT+TGG | 0.554229 | 3_3:+88105751 | None:intergenic |
| GGAATCGGATCTTTGTGGAT+TGG | 0.556999 | 3_3:+88105535 | None:intergenic |
| TGATGCGCACCTCAATGCGC+AGG | 0.581755 | 3_3:-88103247 | Msa0481750:CDS |
| TGATGCGCACCTCAATGCGC+AGG | 0.581755 | 3_3:-88103442 | Msa0481750:CDS |
| TGAATACCTCCTGCGCATTG+AGG | 0.582027 | 3_3:+88103238 | None:intergenic |
| TGAATACCTCCTGCGCATTG+AGG | 0.582027 | 3_3:+88103433 | None:intergenic |
| CTGTAGCCATGCTTGCAGGA+AGG | 0.584184 | 3_3:+88103466 | None:intergenic |
| TTTGGGAGATCAGGGTGCTG+AGG | 0.589123 | 3_3:-88103292 | Msa0481750:CDS |
| GGTTACAAGAAAGCTCATGC+TGG | 0.591204 | 3_3:-88104038 | Msa0481750:CDS |
| ACATTGTTCAAGGCTGCCCA+AGG | 0.592741 | 3_3:+88101320 | None:intergenic |
| AGAACTATTATCACCATACA+AGG | 0.595178 | 3_3:+88101240 | None:intergenic |
| GGATCTTTGTGGATTGGACG+CGG | 0.600194 | 3_3:+88105541 | None:intergenic |
| TCTTTCTAGCCCGATCACCT+TGG | 0.600297 | 3_3:-88105342 | Msa0481750:CDS |
| GCGTAATATGCTCTCCATAG+AGG | 0.601369 | 3_3:+88102952 | None:intergenic |
| TTAAGAAAACACAGTTCAGA+GGG | 0.601755 | 3_3:+88101095 | None:intergenic |
| ACTTACTCCTAATCTTGTAA+GGG | 0.606978 | 3_3:+88104003 | None:intergenic |
| ACTTACTCCTAATCTTGTAA+GGG | 0.606978 | 3_3:-88105425 | Msa0481750:CDS |
| TCCAATGAACATATCTCCCA+TGG | 0.607469 | 3_3:+88101368 | None:intergenic |
| TGGATCATGTTGATTACCAT+GGG | 0.612076 | 3_3:-88101384 | Msa0481750:CDS |
| ACACAGTTCAGAGGGCGCCA+GGG | 0.612347 | 3_3:+88101103 | None:intergenic |
| GTAAGCAACGAGTGTGTCGA+AGG | 0.614214 | 3_3:+88105465 | None:intergenic |
| GTGGATCATGTTGATTACCA+TGG | 0.635272 | 3_3:-88101385 | Msa0481750:CDS |
| CATCCACAAATATGGCATCA+GGG | 0.635750 | 3_3:+88101407 | None:intergenic |
| CAGTTCAGAGGGCGCCAGGG+CGG | 0.639291 | 3_3:+88101106 | None:intergenic |
| CCGATTCCGCTCTATAGGAG+CGG | 0.648882 | 3_3:-88105520 | Msa0481750:five_prime_UTR |
| TTCAAACTAAAGAACCAATG+AGG | 0.650366 | 3_3:+88104261 | None:intergenic |
| GAGAGCATATTACGCGCACT+CGG | 0.654391 | 3_3:-88102944 | Msa0481750:CDS |
| TGCGCACCTCAATGCGCAGG+AGG | 0.656178 | 3_3:-88103244 | Msa0481750:intron |
| TGCGCACCTCAATGCGCAGG+AGG | 0.656178 | 3_3:-88103439 | Msa0481750:intron |
| AAATTCCCGCTCCTATAGAG+CGG | 0.661761 | 3_3:+88105514 | None:intergenic |
| CTACTGCCAAGACTGCACTG+GGG | 0.680684 | 3_3:-88104673 | Msa0481750:CDS |
| AATCACCAAGAGTACTGCTG+TGG | 0.685662 | 3_3:-88101533 | Msa0481750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATATATATTGCT+GGG | + | chr3_3:88101173-88101192 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATATATATTGC+TGG | + | chr3_3:88101174-88101193 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAACAG+TGG | + | chr3_3:88103077-88103096 | None:intergenic | 10.0% |
| !!! | TCTTAAAATTAAGAAATTTT+TGG | - | chr3_3:88103250-88103269 | Msa0481750:CDS | 10.0% |
| !! | TAAATAAAAAAACAAAACAA+AGG | + | chr3_3:88103452-88103471 | None:intergenic | 10.0% |
| !! | AAATAAAAAAAACAAAACAA+AGG | + | chr3_3:88103647-88103666 | None:intergenic | 10.0% |
| !! | AAAAAAACAATGATTATTCT+CGG | + | chr3_3:88101137-88101156 | None:intergenic | 15.0% |
| !!! | GAATAATCATTGTTTTTTTT+AGG | - | chr3_3:88101138-88101157 | Msa0481750:three_prime_UTR | 15.0% |
| !!! | AATTTTAAATGTTTATTGAG+CGG | - | chr3_3:88101333-88101352 | Msa0481750:three_prime_UTR | 15.0% |
| !! | AAAGGAAGAAATTAAAAAAA+AGG | + | chr3_3:88102306-88102325 | None:intergenic | 15.0% |
| !!! | TGAAAATAAAACTTTTGAAA+AGG | + | chr3_3:88102324-88102343 | None:intergenic | 15.0% |
| !!! | TCTTTTATTTATCCTTTTAT+AGG | - | chr3_3:88103102-88103121 | Msa0481750:CDS | 15.0% |
| !!! | ATATATTATTTTTTTTTGGC+AGG | - | chr3_3:88103301-88103320 | Msa0481750:CDS | 15.0% |
| !!! | TATATTATTTTTTTTTGGCA+GGG | - | chr3_3:88103302-88103321 | Msa0481750:CDS | 15.0% |
| !! | AATAAAAATATTCCAGAATA+AGG | + | chr3_3:88103949-88103968 | None:intergenic | 15.0% |
| !! | TGAAAATAGGTAATTTAAAT+TGG | - | chr3_3:88104730-88104749 | Msa0481750:intron | 15.0% |
| !!! | AAGTTTTTAAACAAAATAGT+TGG | + | chr3_3:88104952-88104971 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTCATTCTTTCAA+AGG | + | chr3_3:88101098-88101117 | None:intergenic | 20.0% |
| !! | TTTCATTCAAATGAATTGTT+TGG | - | chr3_3:88101228-88101247 | Msa0481750:three_prime_UTR | 20.0% |
| !! | TTCATTCAAATGAATTGTTT+GGG | - | chr3_3:88101229-88101248 | Msa0481750:three_prime_UTR | 20.0% |
| !! | GAATTAGAATAAGAATATCA+CGG | - | chr3_3:88101525-88101544 | Msa0481750:CDS | 20.0% |
| !! | AATTAGAATAAGAATATCAC+GGG | - | chr3_3:88101526-88101545 | Msa0481750:CDS | 20.0% |
| !! | CAAACATACAAAAAATTAGT+AGG | + | chr3_3:88102065-88102084 | None:intergenic | 20.0% |
| !!! | TTGTTTTACTTGTTTTACTT+AGG | - | chr3_3:88102082-88102101 | Msa0481750:intron | 20.0% |
| !! | GAATTAGAATAAGAATATCA+CGG | + | chr3_3:88101525-88101544 | None:intergenic | 20.0% |
| !!! | TATTTTCATCAATGTTTAGA+AGG | - | chr3_3:88103028-88103047 | Msa0481750:CDS | 20.0% |
| !! | CTAAATTCTAATCCTATAAA+AGG | + | chr3_3:88103117-88103136 | None:intergenic | 20.0% |
| !! | ATAGGATTAGAATTTAGAAA+TGG | - | chr3_3:88103120-88103139 | Msa0481750:intron | 20.0% |
| !! | TTTATACTTGAATTAAGTTC+AGG | - | chr3_3:88103664-88103683 | Msa0481750:intron | 20.0% |
| !! | TTATACTTGAATTAAGTTCA+GGG | - | chr3_3:88103665-88103684 | Msa0481750:intron | 20.0% |
| !!! | AAAGTAAGTCGTTTAATTTT+TGG | - | chr3_3:88103912-88103931 | Msa0481750:intron | 20.0% |
| !!! | AAGTAAGTCGTTTAATTTTT+GGG | - | chr3_3:88103913-88103932 | Msa0481750:intron | 20.0% |
| !! | TAGAATACATTAAAAGAACA+AGG | + | chr3_3:88104243-88104262 | None:intergenic | 20.0% |
| !!! | TGAAGAATTGGATAAAATTT+TGG | - | chr3_3:88104266-88104285 | Msa0481750:intron | 20.0% |
| !! | ATATACAAACTAGTTAATGA+GGG | - | chr3_3:88104339-88104358 | Msa0481750:intron | 20.0% |
| !! | AATGATTATCACTAATGAAT+GGG | + | chr3_3:88104408-88104427 | None:intergenic | 20.0% |
| !! | TAATGATTATCACTAATGAA+TGG | + | chr3_3:88104409-88104428 | None:intergenic | 20.0% |
| !! | AGGTAATTTAAATTGGTTAA+TGG | - | chr3_3:88104737-88104756 | Msa0481750:intron | 20.0% |
| !! | TTATTTAACAGTGAATAATC+TGG | - | chr3_3:88105136-88105155 | Msa0481750:intron | 20.0% |
| !! | ACAAAAGTTTAAAAATGAAC+AGG | + | chr3_3:88105197-88105216 | None:intergenic | 20.0% |
| !!! | TCTTGATTTCTTTTGATATT+TGG | - | chr3_3:88105666-88105685 | Msa0481750:five_prime_UTR | 20.0% |
| ! | CTTTCAACACAATATTGTTT+GGG | - | chr3_3:88101252-88101271 | Msa0481750:three_prime_UTR | 25.0% |
| ! | ATTAGAATAAGAATATCACG+GGG | - | chr3_3:88101527-88101546 | Msa0481750:CDS | 25.0% |
| ! | CAGTTATAGACATAGAAAAT+AGG | + | chr3_3:88101974-88101993 | None:intergenic | 25.0% |
| !! | CTATAACTGTTTGTAGATTT+TGG | - | chr3_3:88101985-88102004 | Msa0481750:intron | 25.0% |
| ! | TATATGTTCATTCATGTTGA+AGG | - | chr3_3:88102212-88102231 | Msa0481750:intron | 25.0% |
| !!! | GTTGTTTTTTAAACAAATCG+TGG | - | chr3_3:88102276-88102295 | Msa0481750:intron | 25.0% |
| !! | TTTTCCAGAATATACATATG+CGG | + | chr3_3:88102470-88102489 | None:intergenic | 25.0% |
| ! | ACCATAACCATACATATTAA+GGG | + | chr3_3:88103222-88103241 | None:intergenic | 25.0% |
| ! | TTTATACCTGAATTAAGTTC+AGG | - | chr3_3:88103468-88103487 | Msa0481750:CDS | 25.0% |
| ! | TTATACCTGAATTAAGTTCA+GGG | - | chr3_3:88103469-88103488 | Msa0481750:CDS | 25.0% |
| ! | GGATATAAATAACCTTATTC+TGG | - | chr3_3:88103934-88103953 | Msa0481750:intron | 25.0% |
| ! | AGTGCAACATATGATTAAAA+AGG | + | chr3_3:88103986-88104005 | None:intergenic | 25.0% |
| !! | ATATGTTGCACTTGATTTTT+GGG | - | chr3_3:88103994-88104013 | Msa0481750:intron | 25.0% |
| !!! | TTTTAGTATTTGTCTTGTTG+CGG | - | chr3_3:88104107-88104126 | Msa0481750:CDS | 25.0% |
| !! | TGTATTCTAAGTTGAAGAAT+TGG | - | chr3_3:88104254-88104273 | Msa0481750:intron | 25.0% |
| !! | GGAATACTTACTAAATTTTC+TGG | - | chr3_3:88104310-88104329 | Msa0481750:intron | 25.0% |
| ! | CATATACAAACTAGTTAATG+AGG | - | chr3_3:88104338-88104357 | Msa0481750:intron | 25.0% |
| ! | ATGATTATCACTAATGAATG+GGG | + | chr3_3:88104407-88104426 | None:intergenic | 25.0% |
| ! | AGTAACTATATATACTAGCA+AGG | + | chr3_3:88104616-88104635 | None:intergenic | 25.0% |
| ! | TAGTATCATGGAAAACTATT+AGG | + | chr3_3:88104672-88104691 | None:intergenic | 25.0% |
| ! | GTTTGTTCTTATGTTTGTAA+AGG | - | chr3_3:88104759-88104778 | Msa0481750:intron | 25.0% |
| ! | AAATTCTAAGTAATCATCAC+AGG | + | chr3_3:88104836-88104855 | None:intergenic | 25.0% |
| ! | TTCTTAATCACAAGTTAGAT+AGG | + | chr3_3:88104981-88105000 | None:intergenic | 25.0% |
| ! | TTCACTGTTAAATAAATTCC+AGG | + | chr3_3:88105131-88105150 | None:intergenic | 25.0% |
| ! | TCTTTTCGTTCTTTCAAAGA+AGG | + | chr3_3:88101046-88101065 | None:intergenic | 30.0% |
| ! | TCTTTTCATTCTTTCAAAGG+AGG | + | chr3_3:88101095-88101114 | None:intergenic | 30.0% |
| GCTTTCAACACAATATTGTT+TGG | - | chr3_3:88101251-88101270 | Msa0481750:three_prime_UTR | 30.0% | |
| AGTAAGTTTCATGTTGTCTA+TGG | + | chr3_3:88101391-88101410 | None:intergenic | 30.0% | |
| AACTTACTCCTAATCTTGTA+AGG | - | chr3_3:88101403-88101422 | Msa0481750:CDS | 30.0% | |
| ACTTACTCCTAATCTTGTAA+GGG | - | chr3_3:88101404-88101423 | Msa0481750:CDS | 30.0% | |
| AAAACCTAAAACACTACCAT+TGG | + | chr3_3:88101575-88101594 | None:intergenic | 30.0% | |
| TCTGTTAATCTATCTATTGC+AGG | - | chr3_3:88101899-88101918 | Msa0481750:intron | 30.0% | |
| ! | AATCTATCTATTGCAGGTTT+TGG | - | chr3_3:88101905-88101924 | Msa0481750:intron | 30.0% |
| !! | ATATGGCTTTTTGACTGTTT+CGG | - | chr3_3:88102254-88102273 | Msa0481750:intron | 30.0% |
| ACCTGAGAACAAAATTTAAG+TGG | - | chr3_3:88102422-88102441 | Msa0481750:intron | 30.0% | |
| ! | TCCACTTAAATTTTGTTCTC+AGG | + | chr3_3:88102426-88102445 | None:intergenic | 30.0% |
| AATACCGCATATGTATATTC+TGG | - | chr3_3:88102463-88102482 | Msa0481750:intron | 30.0% | |
| ATGAAGCTTAGGTCAAAATT+TGG | + | chr3_3:88102512-88102531 | None:intergenic | 30.0% | |
| !! | AATTTTGACCTAAGCTTCAT+TGG | - | chr3_3:88102512-88102531 | Msa0481750:intron | 30.0% |
| TTAAAGAACCAATGAAGCTT+AGG | + | chr3_3:88102523-88102542 | None:intergenic | 30.0% | |
| TTCAAACTAAAGAACCAATG+AGG | + | chr3_3:88102571-88102590 | None:intergenic | 30.0% | |
| ACTTACTCCTAATCTTGTAA+GGG | + | chr3_3:88101404-88101423 | None:intergenic | 30.0% | |
| AACTTACTCCTAATCTTGTA+AGG | + | chr3_3:88101403-88101422 | None:intergenic | 30.0% | |
| ! | TTTTATGTGTTTGAGTGATG+AGG | - | chr3_3:88102948-88102967 | Msa0481750:CDS | 30.0% |
| TTTATGTGTTTGAGTGATGA+GGG | - | chr3_3:88102949-88102968 | Msa0481750:CDS | 30.0% | |
| AAGACAAATCTTAGCATCTT+AGG | - | chr3_3:88102984-88103003 | Msa0481750:CDS | 30.0% | |
| TTTGTAGTTTGAAAGCGAAT+TGG | - | chr3_3:88103153-88103172 | Msa0481750:intron | 30.0% | |
| TTGTAGTTTGAAAGCGAATT+GGG | - | chr3_3:88103154-88103173 | Msa0481750:intron | 30.0% | |
| TCCCTTAATATGTATGGTTA+TGG | - | chr3_3:88103218-88103237 | Msa0481750:intron | 30.0% | |
| CACCATAACCATACATATTA+AGG | + | chr3_3:88103223-88103242 | None:intergenic | 30.0% | |
| TATACCTGAATTAAGTTCAG+GGG | - | chr3_3:88103470-88103489 | Msa0481750:CDS | 30.0% | |
| !!! | TGAGGGATTTGATTTTGATT+TGG | - | chr3_3:88103751-88103770 | Msa0481750:intron | 30.0% |
| !!! | GAGGGATTTGATTTTGATTT+GGG | - | chr3_3:88103752-88103771 | Msa0481750:intron | 30.0% |
| !!! | AGGGATTTGATTTTGATTTG+GGG | - | chr3_3:88103753-88103772 | Msa0481750:intron | 30.0% |
| AGGTCATTAAAATCTGCAAA+TGG | + | chr3_3:88103800-88103819 | None:intergenic | 30.0% | |
| TTGCAAATTATCGTGTAGTA+AGG | + | chr3_3:88103825-88103844 | None:intergenic | 30.0% | |
| ! | ACGATAATTTGCAAGAATTG+AGG | - | chr3_3:88103831-88103850 | Msa0481750:intron | 30.0% |
| ! | CATATGTTGCACTTGATTTT+TGG | - | chr3_3:88103993-88104012 | Msa0481750:intron | 30.0% |
| GACAAATACTAAAACAGAGT+TGG | + | chr3_3:88104101-88104120 | None:intergenic | 30.0% | |
| !! | AGTTTTTCAGAGTAGTATCA+TGG | + | chr3_3:88104684-88104703 | None:intergenic | 30.0% |
| TATGTTTGTAAAGGCCATAA+TGG | - | chr3_3:88104768-88104787 | Msa0481750:intron | 30.0% | |
| AAAATTAGCGTGCTTGTATT+GGG | + | chr3_3:88104863-88104882 | None:intergenic | 30.0% | |
| AAAAATTAGCGTGCTTGTAT+TGG | + | chr3_3:88104864-88104883 | None:intergenic | 30.0% | |
| AGTACAATCAAAACTTCAAC+TGG | + | chr3_3:88105055-88105074 | None:intergenic | 30.0% | |
| ACTTGTAAAGGAAGGAAAAA+TGG | + | chr3_3:88105095-88105114 | None:intergenic | 30.0% | |
| TAAATAAATTCCAGGACTTC+TGG | + | chr3_3:88105123-88105142 | None:intergenic | 30.0% | |
| TAAATGTGAAGTACGTTTAG+TGG | - | chr3_3:88105171-88105190 | Msa0481750:CDS | 30.0% | |
| TAATTACACATAACGACACT+AGG | + | chr3_3:88105222-88105241 | None:intergenic | 30.0% | |
| TTGAACGTTAACATTGTTCA+AGG | + | chr3_3:88105522-88105541 | None:intergenic | 30.0% | |
| ! | TTGTTTCATGAATTGCCTTT+TGG | - | chr3_3:88105556-88105575 | Msa0481750:five_prime_UTR | 30.0% |
| AGAACTATTATCACCATACA+AGG | + | chr3_3:88105592-88105611 | None:intergenic | 30.0% | |
| GCTAGAAAACTTGAGATAAA+AGG | + | chr3_3:88105692-88105711 | None:intergenic | 30.0% | |
| TTAAGAAAACACAGTTCAGA+GGG | + | chr3_3:88105737-88105756 | None:intergenic | 30.0% | |
| ! | GTTTGCATCTTTGTTTAAGT+GGG | + | chr3_3:88105801-88105820 | None:intergenic | 30.0% |
| ! | AGTTTGCATCTTTGTTTAAG+TGG | + | chr3_3:88105802-88105821 | None:intergenic | 30.0% |
| AAAGAAGGAGAAAGGATGTT+GGG | + | chr3_3:88101031-88101050 | None:intergenic | 35.0% | |
| GTTCTTTCAAAGAAGGAGAA+AGG | + | chr3_3:88101039-88101058 | None:intergenic | 35.0% | |
| ATTCTTTCAAAGGAGGAGAA+AGG | + | chr3_3:88101088-88101107 | None:intergenic | 35.0% | |
| ! | CTTTTCTCCCTTACAAGATT+AGG | + | chr3_3:88102819-88102838 | None:intergenic | 35.0% |
| TGTTCTTTAACCAAGGTGAT+CGG | + | chr3_3:88101500-88101519 | None:intergenic | 35.0% | |
| TCTTACCTGTTCTTTAACCA+AGG | + | chr3_3:88102671-88102690 | None:intergenic | 35.0% | |
| !! | TCTTCCAATGGTAGTGTTTT+AGG | - | chr3_3:88101568-88101587 | Msa0481750:intron | 35.0% |
| AGATCTGTTATTGCAGATCT+TGG | - | chr3_3:88101641-88101660 | Msa0481750:intron | 35.0% | |
| AAACCAAGATCTGCAATAAC+AGG | + | chr3_3:88101647-88101666 | None:intergenic | 35.0% | |
| TGAAAAAGCTGAGAGTGATT+TGG | - | chr3_3:88102133-88102152 | Msa0481750:intron | 35.0% | |
| TTCTTACCTGTTCTTTAACC+AGG | - | chr3_3:88102670-88102689 | Msa0481750:intron | 35.0% | |
| TCTTACCTGTTCTTTAACCA+GGG | - | chr3_3:88102671-88102690 | Msa0481750:intron | 35.0% | |
| CTCAAGGAAAATCGTATCTA+AGG | - | chr3_3:88102730-88102749 | Msa0481750:intron | 35.0% | |
| ! | CTTTTCTCCCTTACAAGATT+AGG | - | chr3_3:88102819-88102838 | Msa0481750:intron | 35.0% |
| TTATGTGTTTGAGTGATGAG+GGG | - | chr3_3:88102950-88102969 | Msa0481750:CDS | 35.0% | |
| CAAATCTTAGCATCTTAGGT+AGG | - | chr3_3:88102988-88103007 | Msa0481750:CDS | 35.0% | |
| TTAGGTAGGTTTAGTGATTG+TGG | - | chr3_3:88103002-88103021 | Msa0481750:CDS | 35.0% | |
| TATGCTCTTGTACTTACAAG+AGG | - | chr3_3:88103177-88103196 | Msa0481750:intron | 35.0% | |
| TACATATTAAGGGACCAACT+AGG | + | chr3_3:88103212-88103231 | None:intergenic | 35.0% | |
| AGTTGGTCCCTTAATATGTA+TGG | - | chr3_3:88103212-88103231 | Msa0481750:intron | 35.0% | |
| !!! | TTTTTTTGGCAGGGTTTAAG+AGG | - | chr3_3:88103311-88103330 | Msa0481750:intron | 35.0% |
| ATACCTGAATTAAGTTCAGG+GGG | - | chr3_3:88103471-88103490 | Msa0481750:CDS | 35.0% | |
| AATTATCGTGTAGTAAGGTC+AGG | + | chr3_3:88103820-88103839 | None:intergenic | 35.0% | |
| TATTTGTGATTGTGTCCTGT+TGG | - | chr3_3:88104019-88104038 | Msa0481750:CDS | 35.0% | |
| AAAACTGGTAAAACTCCAAC+AGG | + | chr3_3:88104037-88104056 | None:intergenic | 35.0% | |
| GTTGGAAAGACAAACTTCTA+TGG | + | chr3_3:88104083-88104102 | None:intergenic | 35.0% | |
| CTCATGTGTTAACTGTTAAC+AGG | - | chr3_3:88104289-88104308 | Msa0481750:intron | 35.0% | |
| !! | ACTTACTAAATTTTCTGGCG+TGG | - | chr3_3:88104315-88104334 | Msa0481750:intron | 35.0% |
| ATGATCCACATCCACAAATA+TGG | + | chr3_3:88105433-88105452 | None:intergenic | 35.0% | |
| ! | TGGATCATGTTGATTACCAT+GGG | - | chr3_3:88105445-88105464 | Msa0481750:exon | 35.0% |
| GTTAAGAAAACACAGTTCAG+AGG | + | chr3_3:88105738-88105757 | None:intergenic | 35.0% | |
| CAAAGAAGGAGAAAGGATGT+TGG | + | chr3_3:88101032-88101051 | None:intergenic | 40.0% | |
| AAAGGAGGAGAAAGGATGTT+GGG | + | chr3_3:88101080-88101099 | None:intergenic | 40.0% | |
| TTGGACGCGGATATTGTATT+GGG | + | chr3_3:88101278-88101297 | None:intergenic | 40.0% | |
| ATTGGACGCGGATATTGTAT+TGG | + | chr3_3:88101279-88101298 | None:intergenic | 40.0% | |
| TTGACAAGAAAACTGGCTAC+TGG | + | chr3_3:88102770-88102789 | None:intergenic | 40.0% | |
| ! | CTGTCGATTGACAAGAAAAC+TGG | + | chr3_3:88102763-88102782 | None:intergenic | 40.0% |
| GTTCTTTAACCAAGGTGATC+GGG | + | chr3_3:88101499-88101518 | None:intergenic | 40.0% | |
| GATCACCTTGGTTAAAGAAC+AGG | - | chr3_3:88101499-88101518 | Msa0481750:CDS | 40.0% | |
| ATAAGAATATCACGGGGTGA+AGG | - | chr3_3:88101533-88101552 | Msa0481750:CDS | 40.0% | |
| TGCTTCTTTCACTCTTCCAA+TGG | - | chr3_3:88101556-88101575 | Msa0481750:intron | 40.0% | |
| GTTCCTGTTATTGCAGATCT+TGG | - | chr3_3:88101682-88101701 | Msa0481750:intron | 40.0% | |
| TACTTAGGATGATGTTGCTG+TGG | - | chr3_3:88102097-88102116 | Msa0481750:intron | 40.0% | |
| GCTTCTAAATGTAGCCTCAT+TGG | - | chr3_3:88102554-88102573 | Msa0481750:intron | 40.0% | |
| TGTTCTTTAACCAGGGTGAT+CGG | - | chr3_3:88102678-88102697 | Msa0481750:intron | 40.0% | |
| ! | CTGTCGATTGACAAGAAAAC+TGG | - | chr3_3:88102763-88102782 | Msa0481750:intron | 40.0% |
| TTGACAAGAAAACTGGCTAC+TGG | - | chr3_3:88102770-88102789 | Msa0481750:intron | 40.0% | |
| ! | AGAGCAGTGTTGAAGAGAAA+GGG | + | chr3_3:88102892-88102911 | None:intergenic | 40.0% |
| ! | AAGAGCAGTGTTGAAGAGAA+AGG | + | chr3_3:88102893-88102912 | None:intergenic | 40.0% |
| GTGAATGTTGATGCCCAATT+AGG | - | chr3_3:88103507-88103526 | Msa0481750:CDS | 40.0% | |
| GTGAATGTTGATGCCCAATT+AGG | - | chr3_3:88103507-88103526 | Msa0481750:CDS | 40.0% | |
| !!! | TTTTGATTTGGGGCTTGATG+TGG | - | chr3_3:88103763-88103782 | Msa0481750:intron | 40.0% |
| GGTTGCTTAAAGTCTGGTTA+TGG | + | chr3_3:88103859-88103878 | None:intergenic | 40.0% | |
| CATAGAGGTTGCTTAAAGTC+TGG | + | chr3_3:88103865-88103884 | None:intergenic | 40.0% | |
| CAGACTTTAAGCAACCTCTA+TGG | - | chr3_3:88103863-88103882 | Msa0481750:intron | 40.0% | |
| AGGCTAGATGCACGTTAAAT+TGG | + | chr3_3:88104486-88104505 | None:intergenic | 40.0% | |
| AACGTGGAAATGTAGAAGCT+GGG | + | chr3_3:88104521-88104540 | None:intergenic | 40.0% | |
| TTTCCACGTTGAACTTGTCT+AGG | - | chr3_3:88104531-88104550 | Msa0481750:intron | 40.0% | |
| ATTCCTAGACAAGTTCAACG+TGG | + | chr3_3:88104537-88104556 | None:intergenic | 40.0% | |
| ACGTTGAACTTGTCTAGGAA+TGG | - | chr3_3:88104536-88104555 | Msa0481750:intron | 40.0% | |
| ! | AGCAAAATGTTTTTCCGAGC+AGG | - | chr3_3:88104568-88104587 | Msa0481750:intron | 40.0% |
| ATTATGTATCTGCACCTGCT+CGG | + | chr3_3:88104585-88104604 | None:intergenic | 40.0% | |
| TGGCATGTACTTGTAAAGGA+AGG | + | chr3_3:88105103-88105122 | None:intergenic | 40.0% | |
| CTTCTGGCATGTACTTGTAA+AGG | + | chr3_3:88105107-88105126 | None:intergenic | 40.0% | |
| ATACCCTGATGCCATATTTG+TGG | - | chr3_3:88105419-88105438 | Msa0481750:CDS | 40.0% | |
| CATCCACAAATATGGCATCA+GGG | + | chr3_3:88105425-88105444 | None:intergenic | 40.0% | |
| ACATCCACAAATATGGCATC+AGG | + | chr3_3:88105426-88105445 | None:intergenic | 40.0% | |
| TGATGCCATATTTGTGGATG+TGG | - | chr3_3:88105425-88105444 | Msa0481750:CDS | 40.0% | |
| ! | GTGGATCATGTTGATTACCA+TGG | - | chr3_3:88105444-88105463 | Msa0481750:exon | 40.0% |
| ACCATGGGAGATATGTTCAT+TGG | - | chr3_3:88105460-88105479 | Msa0481750:five_prime_UTR | 40.0% | |
| TCCAATGAACATATCTCCCA+TGG | + | chr3_3:88105464-88105483 | None:intergenic | 40.0% | |
| CAAGGACTCAAACATCCAAA+AGG | + | chr3_3:88105574-88105593 | None:intergenic | 40.0% | |
| TGGATGTTTGAGTCCTTGTA+TGG | - | chr3_3:88105576-88105595 | Msa0481750:five_prime_UTR | 40.0% | |
| CAAAGGAGGAGAAAGGATGT+TGG | + | chr3_3:88101081-88101100 | None:intergenic | 45.0% | |
| GGAATCGGATCTTTGTGGAT+TGG | + | chr3_3:88101297-88101316 | None:intergenic | 45.0% | |
| AAGATCCGATTCCGCTCTAT+AGG | - | chr3_3:88101304-88101323 | Msa0481750:three_prime_UTR | 45.0% | |
| AAATTCCCGCTCCTATAGAG+CGG | + | chr3_3:88101318-88101337 | None:intergenic | 45.0% | |
| TACTGGTAGAAAGCTCATGC+TGG | + | chr3_3:88101442-88101461 | None:intergenic | 45.0% | |
| GATCACCCTGGTTAAAGAAC+AGG | + | chr3_3:88102679-88102698 | None:intergenic | 45.0% | |
| GTTCTTTAACCAGGGTGATC+GGG | - | chr3_3:88102679-88102698 | Msa0481750:intron | 45.0% | |
| GGTTACAAGAAAGCTCATGC+TGG | - | chr3_3:88102791-88102810 | Msa0481750:intron | 45.0% | |
| TCAACACTGCTCTTCAACAC+TGG | - | chr3_3:88102899-88102918 | Msa0481750:intron | 45.0% | |
| AGAGGAGTGAATGTCCTAGT+TGG | - | chr3_3:88103195-88103214 | Msa0481750:intron | 45.0% | |
| TTTGGCAGGGTTTAAGAGGA+AGG | - | chr3_3:88103315-88103334 | Msa0481750:intron | 45.0% | |
| TTGGCAGGGTTTAAGAGGAA+GGG | - | chr3_3:88103316-88103335 | Msa0481750:intron | 45.0% | |
| CAAAAACCTTCCTGCAAGCA+TGG | - | chr3_3:88103357-88103376 | Msa0481750:intron | 45.0% | |
| CCCAAAGCAAGTGCCTAATT+GGG | + | chr3_3:88103523-88103542 | None:intergenic | 45.0% | |
| CCCAATTAGGCACTTGCTTT+GGG | - | chr3_3:88103520-88103539 | Msa0481750:intron | 45.0% | |
| TCCCAAAGCAAGTGCCTAAT+TGG | + | chr3_3:88103524-88103543 | None:intergenic | 45.0% | |
| CCCAAAGCAAGTGCCTAATT+GGG | + | chr3_3:88103523-88103542 | None:intergenic | 45.0% | |
| CCCAATTAGGCACTTGCTTT+GGG | - | chr3_3:88103520-88103539 | Msa0481750:intron | 45.0% | |
| TCCCAAAGCAAGTGCCTAAT+TGG | + | chr3_3:88103524-88103543 | None:intergenic | 45.0% | |
| GCGTAATATGCTCTCCATAG+AGG | + | chr3_3:88103880-88103899 | None:intergenic | 45.0% | |
| GTGATGCAGATGCAGAAAAC+TGG | + | chr3_3:88104052-88104071 | None:intergenic | 45.0% | |
| GCACCTTACTACGTCTTATG+CGG | - | chr3_3:88104156-88104175 | Msa0481750:intron | 45.0% | |
| CACCTTACTACGTCTTATGC+GGG | - | chr3_3:88104157-88104176 | Msa0481750:intron | 45.0% | |
| ACCTTACTACGTCTTATGCG+GGG | - | chr3_3:88104158-88104177 | Msa0481750:intron | 45.0% | |
| AAGCTGGGGAAAGTAGCATT+AGG | + | chr3_3:88104506-88104525 | None:intergenic | 45.0% | |
| ACGTGGAAATGTAGAAGCTG+GGG | + | chr3_3:88104520-88104539 | None:intergenic | 45.0% | |
| CAACGTGGAAATGTAGAAGC+TGG | + | chr3_3:88104522-88104541 | None:intergenic | 45.0% | |
| ATAATGGTCAGAGTGCGCAA+CGG | - | chr3_3:88104784-88104803 | Msa0481750:intron | 45.0% | |
| !! | AATCACCAAGAGTACTGCTG+TGG | - | chr3_3:88105296-88105315 | Msa0481750:intron | 45.0% |
| ! | TGCTGTGGTTCGGAAAGTTA+TGG | - | chr3_3:88105311-88105330 | Msa0481750:intron | 45.0% |
| ! | GCTGTGGTTCGGAAAGTTAT+GGG | - | chr3_3:88105312-88105331 | Msa0481750:intron | 45.0% |
| TGAATGATCCAAACCAGCCT+TGG | - | chr3_3:88105492-88105511 | Msa0481750:five_prime_UTR | 45.0% | |
| GAATGATCCAAACCAGCCTT+GGG | - | chr3_3:88105493-88105512 | Msa0481750:five_prime_UTR | 45.0% | |
| TCCCATCTTCGTCTCAAAAG+TGG | - | chr3_3:88105767-88105786 | Msa0481750:five_prime_UTR | 45.0% | |
| !!! | GCCACTTTTGAGACGAAGAT+GGG | + | chr3_3:88105771-88105790 | None:intergenic | 45.0% |
| !!! | TGCCACTTTTGAGACGAAGA+TGG | + | chr3_3:88105772-88105791 | None:intergenic | 45.0% |
| !! | ATTTATTTAAATTCTTAATA+TGG | - | chr3_3:88102237-88102256 | Msa0481750:intron | 5.0% |
| !!! | TAACATATATTATTTTTTTT+TGG | - | chr3_3:88103297-88103316 | Msa0481750:CDS | 5.0% |
| !! | AAATTATAATAAATGAAAAT+AGG | - | chr3_3:88104717-88104736 | Msa0481750:CDS | 5.0% |
| !! | GGATCTTTGTGGATTGGACG+CGG | + | chr3_3:88101291-88101310 | None:intergenic | 50.0% |
| AGAGCGGAATCGGATCTTTG+TGG | + | chr3_3:88101302-88101321 | None:intergenic | 50.0% | |
| GTAAGCAACGAGTGTGTCGA+AGG | + | chr3_3:88101367-88101386 | None:intergenic | 50.0% | |
| ! | TCTTTCTAGCCCGATCACCT+TGG | - | chr3_3:88101487-88101506 | Msa0481750:intron | 50.0% |
| TTTACCCCCCACTACAGTCT+TGG | + | chr3_3:88102186-88102205 | None:intergenic | 50.0% | |
| !! | ATAGGCAGAAAGAGCGCTCA+AGG | - | chr3_3:88102714-88102733 | Msa0481750:intron | 50.0% |
| TGTGTTTGAGTGATGAGGGG+TGG | - | chr3_3:88102953-88102972 | Msa0481750:CDS | 50.0% | |
| TTTGAGTGATGAGGGGTGGA+GGG | - | chr3_3:88102957-88102976 | Msa0481750:CDS | 50.0% | |
| TGGCAGGGTTTAAGAGGAAG+GGG | - | chr3_3:88103317-88103336 | Msa0481750:intron | 50.0% | |
| TCATCTGTAGCCATGCTTGC+AGG | + | chr3_3:88103370-88103389 | None:intergenic | 50.0% | |
| TGAATACCTCCTGCGCATTG+AGG | + | chr3_3:88103399-88103418 | None:intergenic | 50.0% | |
| CAGCCCCCTGAACTTAATTC+AGG | + | chr3_3:88103477-88103496 | None:intergenic | 50.0% | |
| GCCCAATTAGGCACTTGCTT+TGG | - | chr3_3:88103519-88103538 | Msa0481750:intron | 50.0% | |
| !! | GCACTTGCTTTGGGAGATCA+GGG | - | chr3_3:88103529-88103548 | Msa0481750:intron | 50.0% |
| TCATCTGTAGCCATGCTTGC+AGG | + | chr3_3:88103370-88103389 | None:intergenic | 50.0% | |
| TGAATACCTCCTGCGCATTG+AGG | + | chr3_3:88103399-88103418 | None:intergenic | 50.0% | |
| GCCCAATTAGGCACTTGCTT+TGG | - | chr3_3:88103519-88103538 | Msa0481750:intron | 50.0% | |
| !! | GCACTTGCTTTGGGAGATCA+GGG | - | chr3_3:88103529-88103548 | Msa0481750:intron | 50.0% |
| ! | TTTGGGGCTTGATGTGGAGA+TGG | - | chr3_3:88103769-88103788 | Msa0481750:intron | 50.0% |
| ! | GAGAGCATATTACGCGCACT+CGG | - | chr3_3:88103885-88103904 | Msa0481750:intron | 50.0% |
| ACCCCGCATAAGACGTAGTA+AGG | + | chr3_3:88104162-88104181 | None:intergenic | 50.0% | |
| GTTGCGCACTCTGACCATTA+TGG | + | chr3_3:88104785-88104804 | None:intergenic | 50.0% | |
| TAATGGTCAGAGTGCGCAAC+GGG | - | chr3_3:88104785-88104804 | Msa0481750:intron | 50.0% | |
| CAAGTACATGCCAGAAGTCC+TGG | - | chr3_3:88105110-88105129 | Msa0481750:intron | 50.0% | |
| !! | CCAAGAGTACTGCTGTGGTT+CGG | - | chr3_3:88105301-88105320 | Msa0481750:intron | 50.0% |
| ACATTGTTCAAGGCTGCCCA+AGG | + | chr3_3:88105512-88105531 | None:intergenic | 50.0% | |
| AGCTCTTATCTAATCCGCCC+TGG | - | chr3_3:88105709-88105728 | Msa0481750:five_prime_UTR | 50.0% | |
| CCGCTCCTATAGAGCGGAAT+CGG | + | chr3_3:88101312-88101331 | None:intergenic | 55.0% | |
| CCGATTCCGCTCTATAGGAG+CGG | - | chr3_3:88101309-88101328 | Msa0481750:three_prime_UTR | 55.0% | |
| CGATTCCGCTCTATAGGAGC+GGG | - | chr3_3:88101310-88101329 | Msa0481750:three_prime_UTR | 55.0% | |
| GCTACTGCCAAGACTGCACT+GGG | - | chr3_3:88102155-88102174 | Msa0481750:intron | 55.0% | |
| CTACTGCCAAGACTGCACTG+GGG | - | chr3_3:88102156-88102175 | Msa0481750:intron | 55.0% | |
| TACTGCCAAGACTGCACTGG+GGG | - | chr3_3:88102157-88102176 | Msa0481750:intron | 55.0% | |
| ATCGGGCTGTCGAGGCTTAT+AGG | - | chr3_3:88102696-88102715 | Msa0481750:intron | 55.0% | |
| GTTTGAGTGATGAGGGGTGG+AGG | - | chr3_3:88102956-88102975 | Msa0481750:CDS | 55.0% | |
| TTGAGTGATGAGGGGTGGAG+GGG | - | chr3_3:88102958-88102977 | Msa0481750:CDS | 55.0% | |
| CTGTAGCCATGCTTGCAGGA+AGG | + | chr3_3:88103366-88103385 | None:intergenic | 55.0% | |
| !! | GGCACTTGCTTTGGGAGATC+AGG | - | chr3_3:88103528-88103547 | Msa0481750:intron | 55.0% |
| !! | TTTGGGAGATCAGGGTGCTG+AGG | - | chr3_3:88103537-88103556 | Msa0481750:intron | 55.0% |
| !! | GGCACTTGCTTTGGGAGATC+AGG | - | chr3_3:88103528-88103547 | Msa0481750:intron | 55.0% |
| !! | TTTGGGAGATCAGGGTGCTG+AGG | - | chr3_3:88103537-88103556 | Msa0481750:intron | 55.0% |
| !! | TTGGGAGATCAGGGTGCTGA+GGG | - | chr3_3:88103538-88103557 | Msa0481750:intron | 55.0% |
| CCGAACCACAGCAGTACTCT+TGG | + | chr3_3:88105304-88105323 | None:intergenic | 55.0% | |
| GGCTACTGCCAAGACTGCAC+TGG | - | chr3_3:88102154-88102173 | Msa0481750:intron | 60.0% | |
| GGGGCTGCCAAGACTGTAGT+GGG | - | chr3_3:88102176-88102195 | Msa0481750:intron | 60.0% | |
| GGGCTGCCAAGACTGTAGTG+GGG | - | chr3_3:88102177-88102196 | Msa0481750:intron | 60.0% | |
| GGCTGCCAAGACTGTAGTGG+GGG | - | chr3_3:88102178-88102197 | Msa0481750:intron | 60.0% | |
| ! | GCTGCCAAGACTGTAGTGGG+GGG | - | chr3_3:88102179-88102198 | Msa0481750:intron | 60.0% |
| TGATGCGCACCTCAATGCGC+AGG | - | chr3_3:88103387-88103406 | Msa0481750:intron | 60.0% | |
| TGCTGAGGAGCCTGCAAGCA+TGG | - | chr3_3:88103552-88103571 | Msa0481750:intron | 60.0% | |
| TGATGCGCACCTCAATGCGC+AGG | - | chr3_3:88103387-88103406 | Msa0481750:intron | 60.0% | |
| ! | AAGGCTGCCCAAGGCTGGTT+TGG | + | chr3_3:88105503-88105522 | None:intergenic | 60.0% |
| TGTTCAAGGCTGCCCAAGGC+TGG | + | chr3_3:88105508-88105527 | None:intergenic | 60.0% | |
| !! | ACACAGTTCAGAGGGCGCCA+GGG | + | chr3_3:88105729-88105748 | None:intergenic | 60.0% |
| !! | AACACAGTTCAGAGGGCGCC+AGG | + | chr3_3:88105730-88105749 | None:intergenic | 60.0% |
| GGGGGCTGCCAAGACTGTAG+TGG | - | chr3_3:88102175-88102194 | Msa0481750:intron | 65.0% | |
| TGCGCACCTCAATGCGCAGG+AGG | - | chr3_3:88103390-88103409 | Msa0481750:intron | 65.0% | |
| TGCGCACCTCAATGCGCAGG+AGG | - | chr3_3:88103390-88103409 | Msa0481750:intron | 65.0% | |
| GGCAGCCCCCAGTGCAGTCT+TGG | + | chr3_3:88102165-88102184 | None:intergenic | 70.0% | |
| CCTCGACAGCCCGATCACCC+TGG | + | chr3_3:88102691-88102710 | None:intergenic | 70.0% | |
| CCAGGGTGATCGGGCTGTCG+AGG | - | chr3_3:88102688-88102707 | Msa0481750:intron | 70.0% | |
| !! | CAGTTCAGAGGGCGCCAGGG+CGG | + | chr3_3:88105726-88105745 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 88101021 | 88105830 | 88101021 | ID=Msa0481750;Name=Msa0481750 |
| chr3_3 | mRNA | 88101021 | 88105830 | 88101021 | ID=Msa0481750-mRNA-1;Parent=Msa0481750;Name=Msa0481750-mRNA-1;_AED=0.32;_eAED=0.32;_QI=378|0.55|0.8|0.9|1|1|10|336|316 |
| chr3_3 | exon | 88101021 | 88101432 | 88101021 | ID=Msa0481750-mRNA-1:exon:25641;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88101490 | 88101568 | 88101490 | ID=Msa0481750-mRNA-1:exon:25640;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88102937 | 88103126 | 88102937 | ID=Msa0481750-mRNA-1:exon:25639;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88103245 | 88103322 | 88103245 | ID=Msa0481750-mRNA-1:exon:25638;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88103440 | 88103528 | 88103440 | ID=Msa0481750-mRNA-1:exon:25637;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88104009 | 88104159 | 88104009 | ID=Msa0481750-mRNA-1:exon:25636;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88104276 | 88104283 | 88104276 | ID=Msa0481750-mRNA-1:exon:25635;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88104651 | 88104747 | 88104651 | ID=Msa0481750-mRNA-1:exon:25634;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88105148 | 88105208 | 88105148 | ID=Msa0481750-mRNA-1:exon:25633;Parent=Msa0481750-mRNA-1 |
| chr3_3 | exon | 88105331 | 88105830 | 88105331 | ID=Msa0481750-mRNA-1:exon:25632;Parent=Msa0481750-mRNA-1 |
| chr3_3 | five_prime_UTR | 88105453 | 88105830 | 88105453 | ID=Msa0481750-mRNA-1:five_prime_utr;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88105331 | 88105452 | 88105331 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88105148 | 88105208 | 88105148 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88104651 | 88104747 | 88104651 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88104276 | 88104283 | 88104276 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88104009 | 88104159 | 88104009 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88103440 | 88103528 | 88103440 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88103245 | 88103322 | 88103245 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88102937 | 88103126 | 88102937 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88101490 | 88101568 | 88101490 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | CDS | 88101357 | 88101432 | 88101357 | ID=Msa0481750-mRNA-1:cds;Parent=Msa0481750-mRNA-1 |
| chr3_3 | three_prime_UTR | 88101021 | 88101356 | 88101021 | ID=Msa0481750-mRNA-1:three_prime_utr;Parent=Msa0481750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
