Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073490 | XP_024626467.1 | 98.750 | 240 | 2 | 1 | 1 | 240 | 1 | 239 | 8.02e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073490 | sp|O80366|ARR9_ARATH | 64.609 | 243 | 74 | 5 | 1 | 240 | 1 | 234 | 7.69e-101 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073490 | A0A072U1M0 | 98.750 | 240 | 2 | 1 | 1 | 240 | 1 | 239 | 3.83e-172 | 483 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1073490 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011930 | Msa1073490 | 0.810436 | 1.153611e-50 | -8.615850e-47 |
| Msa0030280 | Msa1073490 | 0.810798 | 9.636777e-51 | -8.615850e-47 |
| Msa0035130 | Msa1073490 | 0.832899 | 7.264790e-56 | -8.615850e-47 |
| Msa0040690 | Msa1073490 | 0.831586 | 1.534646e-55 | -8.615850e-47 |
| Msa0052610 | Msa1073490 | 0.845102 | 5.007188e-59 | -8.615850e-47 |
| Msa0052690 | Msa1073490 | 0.821787 | 3.352361e-53 | -8.615850e-47 |
| Msa0067870 | Msa1073490 | 0.822891 | 1.858015e-53 | -8.615850e-47 |
| Msa0077880 | Msa1073490 | 0.839546 | 1.485666e-57 | -8.615850e-47 |
| Msa0097850 | Msa1073490 | 0.855853 | 4.772507e-62 | -8.615850e-47 |
| Msa0098470 | Msa1073490 | 0.845470 | 3.979970e-59 | -8.615850e-47 |
| Msa0104700 | Msa1073490 | 0.815733 | 7.947123e-52 | -8.615850e-47 |
| Msa0118710 | Msa1073490 | 0.817490 | 3.209714e-52 | -8.615850e-47 |
| Msa0615440 | Msa1073490 | 0.817567 | 3.084268e-52 | -8.615850e-47 |
| Msa0616240 | Msa1073490 | 0.823571 | 1.289062e-53 | -8.615850e-47 |
| Msa0633760 | Msa1073490 | 0.802906 | 4.492366e-49 | -8.615850e-47 |
| Msa0643320 | Msa1073490 | 0.800781 | 1.226565e-48 | -8.615850e-47 |
| Msa0654870 | Msa1073490 | 0.810353 | 1.202248e-50 | -8.615850e-47 |
| Msa0683600 | Msa1073490 | 0.808213 | 3.458616e-50 | -8.615850e-47 |
| Msa0692880 | Msa1073490 | 0.809105 | 2.230379e-50 | -8.615850e-47 |
| Msa0698490 | Msa1073490 | 0.813981 | 1.943815e-51 | -8.615850e-47 |
| Msa0698660 | Msa1073490 | 0.812139 | 4.926333e-51 | -8.615850e-47 |
| Msa0699570 | Msa1073490 | 0.820325 | 7.279123e-53 | -8.615850e-47 |
| Msa0705820 | Msa1073490 | 0.834861 | 2.345849e-56 | -8.615850e-47 |
| Msa0758230 | Msa1073490 | 0.818480 | 1.917266e-52 | -8.615850e-47 |
| Msa0780930 | Msa1073490 | 0.804808 | 1.807990e-49 | -8.615850e-47 |
| Msa0818770 | Msa1073490 | 0.802496 | 5.458362e-49 | -8.615850e-47 |
| Msa0150990 | Msa1073490 | 0.820960 | 5.202865e-53 | -8.615850e-47 |
| Msa0167480 | Msa1073490 | 0.802346 | 5.860639e-49 | -8.615850e-47 |
| Msa0170410 | Msa1073490 | 0.804834 | 1.785925e-49 | -8.615850e-47 |
| Msa0181230 | Msa1073490 | 0.800252 | 1.572662e-48 | -8.615850e-47 |
| Msa0188350 | Msa1073490 | 0.811878 | 5.617786e-51 | -8.615850e-47 |
| Msa0192480 | Msa1073490 | 0.804172 | 2.453717e-49 | -8.615850e-47 |
| Msa0197520 | Msa1073490 | 0.838064 | 3.589939e-57 | -8.615850e-47 |
| Msa0207350 | Msa1073490 | 0.836528 | 8.877756e-57 | -8.615850e-47 |
| Msa0208300 | Msa1073490 | 0.801936 | 7.114764e-49 | -8.615850e-47 |
| Msa0223230 | Msa1073490 | 0.804725 | 1.881730e-49 | -8.615850e-47 |
| Msa0231660 | Msa1073490 | 0.806503 | 7.968525e-50 | -8.615850e-47 |
| Msa0367470 | Msa1073490 | 0.800586 | 1.344366e-48 | -8.615850e-47 |
| Msa0419720 | Msa1073490 | 0.800204 | 1.608334e-48 | -8.615850e-47 |
| Msa0435370 | Msa1073490 | 0.816506 | 5.338595e-52 | -8.615850e-47 |
| Msa0435420 | Msa1073490 | 0.804155 | 2.474539e-49 | -8.615850e-47 |
| Msa0465960 | Msa1073490 | 0.810379 | 1.186727e-50 | -8.615850e-47 |
| Msa0467100 | Msa1073490 | 0.823869 | 1.097686e-53 | -8.615850e-47 |
| Msa0997430 | Msa1073490 | 0.806482 | 8.050299e-50 | -8.615850e-47 |
| Msa1025080 | Msa1073490 | 0.809312 | 2.014172e-50 | -8.615850e-47 |
| Msa1033660 | Msa1073490 | 0.857879 | 1.208369e-62 | -8.615850e-47 |
| Msa1034500 | Msa1073490 | 0.814860 | 1.242367e-51 | -8.615850e-47 |
| Msa1070390 | Msa1073490 | 0.802478 | 5.504235e-49 | -8.615850e-47 |
| Msa1073490 | Msa1079230 | 0.837496 | 5.023912e-57 | -8.615850e-47 |
| Msa1073490 | Msa1080640 | 0.803022 | 4.249844e-49 | -8.615850e-47 |
| Msa1073490 | Msa1089450 | 0.808840 | 2.540940e-50 | -8.615850e-47 |
| Msa1073490 | Msa1109090 | 0.824580 | 7.472163e-54 | -8.615850e-47 |
| Msa1073490 | Msa1113950 | 0.849296 | 3.541698e-60 | -8.615850e-47 |
| Msa1073490 | Msa1125790 | -0.806413 | 8.325721e-50 | -8.615850e-47 |
| Msa1073490 | Msa1131560 | 0.832960 | 7.012624e-56 | -8.615850e-47 |
| Msa1073490 | Msa1135890 | 0.830785 | 2.414743e-55 | -8.615850e-47 |
| Msa1073490 | Msa1145240 | 0.828268 | 9.877743e-55 | -8.615850e-47 |
| Msa1073490 | Msa1152920 | 0.813908 | 2.017503e-51 | -8.615850e-47 |
| Msa1073490 | Msa1160310 | 0.862149 | 6.216768e-64 | -8.615850e-47 |
| Msa1073490 | Msa1166870 | 0.805275 | 1.443776e-49 | -8.615850e-47 |
| Msa1073490 | Msa1169040 | 0.803996 | 2.670488e-49 | -8.615850e-47 |
| Msa1073490 | Msa1178370 | 0.802425 | 5.644151e-49 | -8.615850e-47 |
| Msa1073490 | Msa1198530 | 0.809812 | 1.572768e-50 | -8.615850e-47 |
| Msa1073490 | Msa1198880 | 0.807694 | 4.459219e-50 | -8.615850e-47 |
| Msa1073490 | Msa1206850 | 0.812687 | 3.739591e-51 | -8.615850e-47 |
| Msa1073490 | Msa1223330 | 0.824992 | 5.974856e-54 | -8.615850e-47 |
| Msa1073490 | Msa1252850 | -0.815412 | 9.369784e-52 | -8.615850e-47 |
| Msa1073490 | Msa1256270 | -0.800191 | 1.618330e-48 | -8.615850e-47 |
| Msa1073490 | Msa1256850 | 0.801456 | 8.927908e-49 | -8.615850e-47 |
| Msa1073490 | Msa1262890 | 0.837370 | 5.409406e-57 | -8.615850e-47 |
| Msa1073490 | Msa1279140 | -0.814755 | 1.310452e-51 | -8.615850e-47 |
| Msa1073490 | Msa1329540 | 0.803439 | 3.483950e-49 | -8.615850e-47 |
| Msa1073490 | Msa1333970 | 0.811156 | 8.062149e-51 | -8.615850e-47 |
| Msa1073490 | Msa1360980 | 0.810851 | 9.386069e-51 | -8.615850e-47 |
| Msa1073490 | Msa1381480 | 0.808333 | 3.261338e-50 | -8.615850e-47 |
| Msa1073490 | Msa1405220 | 0.804349 | 2.253935e-49 | -8.615850e-47 |
| Msa1073490 | Msa1418240 | 0.824710 | 6.964385e-54 | -8.615850e-47 |
| Msa1073490 | Msa1422910 | 0.811935 | 5.457595e-51 | -8.615850e-47 |
| Msa1073490 | Msa1437270 | 0.805196 | 1.499912e-49 | -8.615850e-47 |
| Msa1073490 | Msa1447180 | 0.839262 | 1.760004e-57 | -8.615850e-47 |
| Msa1073490 | Msa1454450 | 0.842171 | 3.043953e-58 | -8.615850e-47 |
| Msa1073490 | Msa1465680 | 0.880617 | 4.736725e-70 | -8.615850e-47 |
| Msa0267780 | Msa1073490 | 0.814846 | 1.251185e-51 | -8.615850e-47 |
| Msa0279850 | Msa1073490 | 0.802171 | 6.367726e-49 | -8.615850e-47 |
| Msa0281430 | Msa1073490 | 0.812100 | 5.023878e-51 | -8.615850e-47 |
| Msa0296250 | Msa1073490 | 0.808451 | 3.077089e-50 | -8.615850e-47 |
| Msa0296820 | Msa1073490 | 0.807242 | 5.562195e-50 | -8.615850e-47 |
| Msa0297010 | Msa1073490 | 0.803518 | 3.356094e-49 | -8.615850e-47 |
| Msa0311510 | Msa1073490 | 0.804139 | 2.492829e-49 | -8.615850e-47 |
| Msa0316910 | Msa1073490 | 0.808694 | 2.730585e-50 | -8.615850e-47 |
| Msa0317970 | Msa1073490 | 0.824553 | 7.585273e-54 | -8.615850e-47 |
| Msa0322900 | Msa1073490 | 0.814953 | 1.184619e-51 | -8.615850e-47 |
| Msa0341690 | Msa1073490 | 0.805048 | 1.611275e-49 | -8.615850e-47 |
| Msa0357900 | Msa1073490 | 0.818120 | 2.313689e-52 | -8.615850e-47 |
| Msa0357990 | Msa1073490 | 0.801967 | 7.011500e-49 | -8.615850e-47 |
| Msa0485240 | Msa1073490 | 0.824796 | 6.648001e-54 | -8.615850e-47 |
| Msa0518030 | Msa1073490 | 0.832838 | 7.520493e-56 | -8.615850e-47 |
| Msa0527020 | Msa1073490 | 0.804695 | 1.909275e-49 | -8.615850e-47 |
| Msa0556010 | Msa1073490 | 0.802254 | 6.121765e-49 | -8.615850e-47 |
| Msa0561430 | Msa1073490 | 0.806777 | 6.975949e-50 | -8.615850e-47 |
| Msa0581690 | Msa1073490 | 0.831642 | 1.487136e-55 | -8.615850e-47 |
| Msa0602370 | Msa1073490 | 0.813132 | 2.988126e-51 | -8.615850e-47 |
| Msa0849440 | Msa1073490 | 0.807530 | 4.832786e-50 | -8.615850e-47 |
| Msa0888990 | Msa1073490 | 0.806439 | 8.223814e-50 | -8.615850e-47 |
| Msa0903710 | Msa1073490 | 0.801447 | 8.965133e-49 | -8.615850e-47 |
| Msa0936380 | Msa1073490 | 0.816839 | 4.496938e-52 | -8.615850e-47 |
| Msa0937020 | Msa1073490 | 0.826185 | 3.115973e-54 | -8.615850e-47 |
| Msa0944200 | Msa1073490 | 0.822633 | 2.133995e-53 | -8.615850e-47 |
| Msa0944610 | Msa1073490 | 0.838113 | 3.488107e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073490 | MtrunA17_Chr7g0256551 | 98.750 | 240 | 2 | 1 | 1 | 240 | 1 | 239 | 7.37e-176 | 483 |
| Msa1073490 | MtrunA17_Chr8g0352871 | 74.522 | 157 | 38 | 1 | 1 | 157 | 1 | 155 | 2.86e-81 | 241 |
| Msa1073490 | MtrunA17_Chr3g0082861 | 69.939 | 163 | 46 | 2 | 7 | 167 | 2 | 163 | 1.41e-76 | 228 |
| Msa1073490 | MtrunA17_Chr5g0414931 | 56.442 | 163 | 64 | 3 | 3 | 164 | 9 | 165 | 1.23e-58 | 185 |
| Msa1073490 | MtrunA17_Chr4g0059571 | 55.828 | 163 | 62 | 3 | 4 | 166 | 21 | 173 | 8.96e-56 | 177 |
| Msa1073490 | MtrunA17_Chr1g0170741 | 62.590 | 139 | 45 | 2 | 8 | 146 | 7 | 138 | 4.18e-55 | 175 |
| Msa1073490 | MtrunA17_Chr3g0124861 | 58.940 | 151 | 49 | 4 | 9 | 149 | 22 | 169 | 3.95e-54 | 174 |
| Msa1073490 | MtrunA17_Chr3g0118211 | 53.165 | 158 | 64 | 2 | 4 | 161 | 18 | 165 | 4.90e-54 | 172 |
| Msa1073490 | MtrunA17_Chr3g0128691 | 58.647 | 133 | 47 | 3 | 10 | 142 | 19 | 143 | 1.85e-49 | 159 |
| Msa1073490 | MtrunA17_Chr4g0021731 | 69.149 | 94 | 19 | 1 | 3 | 96 | 5 | 88 | 1.67e-40 | 134 |
| Msa1073490 | MtrunA17_Chr8g0345901 | 32.911 | 158 | 86 | 2 | 11 | 167 | 38 | 176 | 4.13e-19 | 85.9 |
| Msa1073490 | MtrunA17_Chr4g0030271 | 34.058 | 138 | 72 | 3 | 11 | 148 | 91 | 209 | 2.86e-18 | 83.6 |
| Msa1073490 | MtrunA17_Chr3g0127941 | 28.659 | 164 | 89 | 4 | 9 | 163 | 56 | 200 | 4.61e-16 | 77.0 |
| Msa1073490 | MtrunA17_Chr1g0181811 | 30.435 | 138 | 77 | 2 | 11 | 148 | 87 | 205 | 1.12e-15 | 75.9 |
| Msa1073490 | MtrunA17_Chr7g0276361 | 28.986 | 138 | 79 | 1 | 11 | 148 | 16 | 134 | 1.47e-14 | 72.4 |
| Msa1073490 | MtrunA17_Chr1g0161431 | 29.139 | 151 | 84 | 3 | 7 | 157 | 13 | 140 | 4.08e-13 | 68.2 |
| Msa1073490 | MtrunA17_Chr2g0304841 | 31.176 | 170 | 85 | 5 | 11 | 170 | 24 | 171 | 6.71e-13 | 67.8 |
| Msa1073490 | MtrunA17_Chr7g0275891 | 30.814 | 172 | 90 | 6 | 11 | 175 | 11 | 160 | 1.38e-12 | 66.2 |
| Msa1073490 | MtrunA17_Chr3g0123131 | 26.708 | 161 | 95 | 3 | 11 | 170 | 19 | 157 | 2.52e-12 | 65.9 |
| Msa1073490 | MtrunA17_Chr1g0149841 | 30.714 | 140 | 75 | 3 | 11 | 150 | 11 | 128 | 2.87e-12 | 65.9 |
| Msa1073490 | MtrunA17_Chr8g0376881 | 24.561 | 171 | 105 | 3 | 4 | 174 | 24 | 170 | 3.00e-12 | 65.9 |
| Msa1073490 | MtrunA17_Chr1g0149851 | 30.714 | 140 | 75 | 3 | 11 | 150 | 11 | 128 | 5.53e-12 | 65.1 |
| Msa1073490 | MtrunA17_Chr4g0074411 | 29.730 | 148 | 80 | 3 | 11 | 156 | 24 | 149 | 9.11e-12 | 64.3 |
| Msa1073490 | MtrunA17_Chr3g0137101 | 30.201 | 149 | 82 | 3 | 11 | 159 | 14 | 140 | 9.20e-12 | 64.3 |
| Msa1073490 | MtrunA17_Chr7g0275401 | 28.873 | 142 | 79 | 2 | 9 | 150 | 9 | 128 | 1.53e-11 | 62.8 |
| Msa1073490 | MtrunA17_Chr3g0091641 | 26.000 | 150 | 90 | 3 | 2 | 150 | 17 | 146 | 1.72e-11 | 63.5 |
| Msa1073490 | MtrunA17_Chr4g0061021 | 25.503 | 149 | 92 | 1 | 2 | 150 | 26 | 155 | 1.86e-11 | 63.5 |
| Msa1073490 | MtrunA17_Chr8g0350761 | 34.328 | 134 | 63 | 5 | 11 | 142 | 23 | 133 | 2.60e-11 | 62.8 |
| Msa1073490 | MtrunA17_Chr4g0074401 | 30.405 | 148 | 79 | 3 | 11 | 156 | 23 | 148 | 4.18e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073490 | AT3G57040.2 | 64.609 | 243 | 74 | 5 | 1 | 240 | 1 | 234 | 7.82e-102 | 295 |
| Msa1073490 | AT3G57040.1 | 64.609 | 243 | 74 | 5 | 1 | 240 | 1 | 234 | 7.82e-102 | 295 |
| Msa1073490 | AT2G41310.1 | 60.000 | 240 | 81 | 5 | 1 | 240 | 1 | 225 | 5.61e-91 | 268 |
| Msa1073490 | AT1G59940.1 | 58.865 | 141 | 48 | 2 | 8 | 148 | 32 | 162 | 7.71e-56 | 178 |
| Msa1073490 | AT3G48100.1 | 56.463 | 147 | 55 | 2 | 3 | 149 | 19 | 156 | 3.82e-55 | 175 |
| Msa1073490 | AT1G10470.3 | 58.000 | 150 | 52 | 3 | 8 | 156 | 19 | 158 | 9.67e-55 | 176 |
| Msa1073490 | AT1G10470.1 | 58.000 | 150 | 52 | 3 | 8 | 156 | 33 | 172 | 1.02e-54 | 176 |
| Msa1073490 | AT1G59940.2 | 58.865 | 141 | 48 | 2 | 8 | 148 | 124 | 254 | 6.43e-54 | 176 |
| Msa1073490 | AT3G56380.1 | 55.944 | 143 | 54 | 2 | 4 | 146 | 15 | 148 | 3.38e-53 | 169 |
| Msa1073490 | AT2G40670.1 | 53.793 | 145 | 60 | 1 | 6 | 150 | 26 | 163 | 5.16e-53 | 169 |
| Msa1073490 | AT1G19050.1 | 58.824 | 136 | 46 | 2 | 8 | 143 | 23 | 148 | 1.50e-52 | 169 |
| Msa1073490 | AT1G74890.1 | 59.559 | 136 | 45 | 2 | 8 | 143 | 17 | 142 | 2.76e-52 | 168 |
| Msa1073490 | AT5G62920.1 | 58.156 | 141 | 49 | 2 | 9 | 149 | 25 | 155 | 9.37e-52 | 166 |
| Msa1073490 | AT3G56380.2 | 55.556 | 144 | 54 | 3 | 4 | 146 | 15 | 149 | 2.08e-51 | 164 |
| Msa1073490 | AT2G40670.2 | 53.425 | 146 | 60 | 2 | 6 | 150 | 26 | 164 | 3.31e-51 | 164 |
| Msa1073490 | AT2G07440.1 | 48.611 | 144 | 58 | 5 | 97 | 240 | 9 | 136 | 1.94e-32 | 115 |
| Msa1073490 | AT1G10470.2 | 58.065 | 62 | 25 | 1 | 96 | 156 | 35 | 96 | 3.72e-17 | 77.0 |
| Msa1073490 | AT5G24470.1 | 30.000 | 140 | 79 | 2 | 9 | 148 | 50 | 170 | 4.09e-15 | 74.7 |
| Msa1073490 | AT5G02810.1 | 32.609 | 138 | 74 | 3 | 11 | 148 | 80 | 198 | 5.26e-15 | 74.3 |
| Msa1073490 | AT2G46790.3 | 28.082 | 146 | 85 | 3 | 9 | 153 | 37 | 163 | 3.56e-14 | 71.6 |
| Msa1073490 | AT5G60100.7 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 3.78e-14 | 71.6 |
| Msa1073490 | AT5G60100.6 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 3.78e-14 | 71.6 |
| Msa1073490 | AT5G60100.4 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 3.78e-14 | 71.6 |
| Msa1073490 | AT2G46790.1 | 28.082 | 146 | 85 | 3 | 9 | 153 | 37 | 163 | 4.02e-14 | 71.6 |
| Msa1073490 | AT5G60100.2 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 5.93e-14 | 71.2 |
| Msa1073490 | AT5G60100.5 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 6.91e-14 | 70.9 |
| Msa1073490 | AT5G60100.3 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 6.91e-14 | 70.9 |
| Msa1073490 | AT5G60100.1 | 32.609 | 138 | 74 | 2 | 11 | 148 | 66 | 184 | 6.91e-14 | 70.9 |
| Msa1073490 | AT2G25180.1 | 31.206 | 141 | 75 | 2 | 11 | 151 | 19 | 137 | 1.08e-13 | 70.5 |
| Msa1073490 | AT1G67710.1 | 28.966 | 145 | 81 | 2 | 9 | 153 | 11 | 133 | 2.90e-13 | 68.9 |
| Msa1073490 | AT5G07210.2 | 32.593 | 135 | 68 | 3 | 8 | 142 | 15 | 126 | 2.98e-13 | 69.3 |
| Msa1073490 | AT4G31920.1 | 29.710 | 138 | 75 | 2 | 11 | 148 | 19 | 134 | 5.33e-12 | 65.5 |
| Msa1073490 | AT1G49190.2 | 29.530 | 149 | 79 | 3 | 7 | 151 | 28 | 154 | 8.02e-12 | 65.1 |
| Msa1073490 | AT1G49190.1 | 29.530 | 149 | 79 | 3 | 7 | 151 | 28 | 154 | 2.32e-11 | 63.2 |
| Msa1073490 | AT5G61380.1 | 24.832 | 149 | 93 | 1 | 2 | 150 | 12 | 141 | 3.47e-11 | 63.2 |
| Msa1073490 | AT5G07210.1 | 30.769 | 143 | 68 | 4 | 8 | 142 | 15 | 134 | 8.82e-11 | 62.0 |
Find 64 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCCTTAGTTGGAGAAAA+TGG | 0.126733 | 7_2:-71019286 | Msa1073490:exon |
| TTTGGAAAATTTGCAAGATT+TGG | 0.165434 | 7_2:-71019539 | Msa1073490:five_prime_UTR |
| TTTAAATCTGATAGCCTTAC+AGG | 0.185020 | 7_2:+71017594 | None:intergenic |
| GGAAATACAGATGGTGTATT+TGG | 0.194626 | 7_2:+71018819 | None:intergenic |
| GCTTTGTGGGATGTGGATTT+TGG | 0.218342 | 7_2:-71019495 | Msa1073490:five_prime_UTR |
| ATGATGAAGCACCAAGATTT+TGG | 0.225936 | 7_2:+71016883 | None:intergenic |
| TTGATTTGGATCTTTCAATT+TGG | 0.240297 | 7_2:+71017545 | None:intergenic |
| AAGGATTAAAAGAAGGTAAA+TGG | 0.265428 | 7_2:+71019301 | None:intergenic |
| ACTCTTTCTCTTGTTATTGT+TGG | 0.284458 | 7_2:+71017362 | None:intergenic |
| TTGGAAAATTTGCAAGATTT+GGG | 0.299967 | 7_2:-71019538 | Msa1073490:five_prime_UTR |
| TGTTCCCTGTAAACATTTCC+TGG | 0.307533 | 7_2:-71017141 | Msa1073490:three_prime_UTR |
| CATGTAATTCAAGATCAATT+TGG | 0.308343 | 7_2:-71019557 | Msa1073490:five_prime_UTR |
| AGAAGCAAAGAAATGGAAAA+TGG | 0.314441 | 7_2:+71019343 | None:intergenic |
| TATTTCCAGGAAATGTTTAC+AGG | 0.315099 | 7_2:+71017136 | None:intergenic |
| AGAGTCACAGTTTCATGTTT+TGG | 0.318671 | 7_2:-71019253 | Msa1073490:CDS |
| GCAAGATTTGGGATGAAATC+TGG | 0.334593 | 7_2:-71019527 | Msa1073490:five_prime_UTR |
| GCAGTTACTACAGTTGATTC+TGG | 0.344676 | 7_2:-71018894 | Msa1073490:intron |
| ACTTGGGTGTTGGTTTATAT+AGG | 0.347253 | 7_2:-71017188 | Msa1073490:three_prime_UTR |
| GAAATACAGATGGTGTATTT+GGG | 0.355026 | 7_2:+71018820 | None:intergenic |
| ATGTGCCTTCAAGAATTAAT+AGG | 0.368999 | 7_2:-71017759 | Msa1073490:intron |
| AATTGGAAGGGAATATTTCC+AGG | 0.371445 | 7_2:+71017123 | None:intergenic |
| AACTATACCTGATGATTGTT+AGG | 0.391930 | 7_2:+71018798 | None:intergenic |
| CAAATTGATCTTGAATTACA+TGG | 0.393419 | 7_2:+71019558 | None:intergenic |
| TACTGTATGCCTGGCATGAC+AGG | 0.404554 | 7_2:-71018605 | Msa1073490:CDS |
| TATTACCTATTAATTCTTGA+AGG | 0.405802 | 7_2:+71017754 | None:intergenic |
| CTGGTCGGATCTTGCTTTGT+GGG | 0.415540 | 7_2:-71019508 | Msa1073490:five_prime_UTR |
| TCTGGTCGGATCTTGCTTTG+TGG | 0.421782 | 7_2:-71019509 | Msa1073490:five_prime_UTR |
| AATCCTTAGTTGGAGAAAAT+GGG | 0.423958 | 7_2:-71019285 | Msa1073490:exon |
| TTATGGGAGGAATATGAGAT+TGG | 0.426769 | 7_2:+71019442 | None:intergenic |
| TTGGTTTATATAGGCTCTAT+AGG | 0.429787 | 7_2:-71017179 | Msa1073490:three_prime_UTR |
| TTAAATATTAACTTGGGTGT+TGG | 0.433869 | 7_2:-71017198 | Msa1073490:three_prime_UTR |
| AAGTGAAAGAAGCAAAGAAA+TGG | 0.436899 | 7_2:+71019336 | None:intergenic |
| GGATCTTGCTTTGTGGGATG+TGG | 0.439185 | 7_2:-71019502 | Msa1073490:five_prime_UTR |
| ACCCTTGAGGAAGGAAAAGA+TGG | 0.441976 | 7_2:+71019404 | None:intergenic |
| CTCAAAACATCTTCATATCA+AGG | 0.455916 | 7_2:-71019186 | Msa1073490:intron |
| TTGTATGATGATAAATCATT+TGG | 0.463555 | 7_2:-71017275 | Msa1073490:exon |
| GTAGCAATGCCACTGTATCT+TGG | 0.465576 | 7_2:+71017300 | None:intergenic |
| TCCAACTAAGGATTAAAAGA+AGG | 0.477610 | 7_2:+71019294 | None:intergenic |
| TGTATTTCCTAACAATCATC+AGG | 0.478134 | 7_2:-71018805 | Msa1073490:intron |
| AAATCATAGCCTGTCATGCC+AGG | 0.488050 | 7_2:+71018596 | None:intergenic |
| TATCAAATGTAACAGATGCT+TGG | 0.497655 | 7_2:-71017646 | Msa1073490:intron |
| TACAGTTGATTCTGGTAGCA+AGG | 0.501635 | 7_2:-71018886 | Msa1073490:CDS |
| TTGATGACAGCATCATAGAT+AGG | 0.505605 | 7_2:-71019227 | Msa1073490:CDS |
| TCATATGAAACAAAATTGGA+AGG | 0.508230 | 7_2:+71017110 | None:intergenic |
| ATAACAGATTACTGTATGCC+TGG | 0.512220 | 7_2:-71018614 | Msa1073490:CDS |
| AATTTAAATGTGTAGGAGCA+TGG | 0.516979 | 7_2:-71017072 | Msa1073490:three_prime_UTR |
| CTTCTCTTGACCCTTGAGGA+AGG | 0.517106 | 7_2:+71019395 | None:intergenic |
| CAAATGTAACAGATGCTTGG+AGG | 0.523574 | 7_2:-71017643 | Msa1073490:intron |
| TACAGATGGTGTATTTGGGT+TGG | 0.527443 | 7_2:+71018824 | None:intergenic |
| TGATTTGCTTAAGAAAATCA+AGG | 0.528385 | 7_2:-71018579 | Msa1073490:intron |
| CATATGAAACAAAATTGGAA+GGG | 0.537580 | 7_2:+71017111 | None:intergenic |
| TGTTCTTCTCTTGACCCTTG+AGG | 0.542370 | 7_2:+71019391 | None:intergenic |
| AAATCATGTCGCTAAACTCA+CGG | 0.569044 | 7_2:+71016932 | None:intergenic |
| TCAGATGACATAATCACCAC+TGG | 0.584254 | 7_2:+71017784 | None:intergenic |
| TGTAACAGATGCTTGGAGGA+AGG | 0.588489 | 7_2:-71017639 | Msa1073490:intron |
| CCCTTGAGGAAGGAAAAGAT+GGG | 0.591099 | 7_2:+71019405 | None:intergenic |
| ATTTCCAGGAAATGTTTACA+GGG | 0.606694 | 7_2:+71017137 | None:intergenic |
| TTAGTTGGAGAAAATGGGAA+TGG | 0.609092 | 7_2:-71019280 | Msa1073490:exon |
| TAGATAGGAAGCTTATTGAG+AGG | 0.630074 | 7_2:-71019212 | Msa1073490:CDS |
| CAATAACAAGAGAAAGAGTG+TGG | 0.644460 | 7_2:-71017358 | Msa1073490:CDS |
| GATTTGGGATGAAATCTGGT+CGG | 0.673753 | 7_2:-71019523 | Msa1073490:five_prime_UTR |
| ATCATTGAGAAACATACCAG+TGG | 0.696105 | 7_2:-71017800 | Msa1073490:CDS |
| AGAACAAGACCAAGATACAG+TGG | 0.701894 | 7_2:-71017309 | Msa1073490:CDS |
| TGATTGTTAGGAAATACAGA+TGG | 0.757940 | 7_2:+71018810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATATATAAATAAA+AGG | - | chr7_2:71016934-71016953 | Msa1073490:intron | 0.0% |
| !!! | TATGTTAATGTTTTTCTTTT+TGG | - | chr7_2:71017602-71017621 | Msa1073490:CDS | 15.0% |
| !!! | AGATCAAAAAAATTACTTTT+TGG | - | chr7_2:71018327-71018346 | Msa1073490:intron | 15.0% |
| !! | TTAAACAATATGTCTTTAAA+TGG | - | chr7_2:71018457-71018476 | Msa1073490:intron | 15.0% |
| !!! | ATTTTCATATGAAACAAAAT+TGG | + | chr7_2:71019518-71019537 | None:intergenic | 15.0% |
| !! | AGAAAAAAATTTAAATGTGT+AGG | - | chr7_2:71019542-71019561 | Msa1073490:five_prime_UTR | 15.0% |
| !!! | AATATAAAAAGTTCATTTTC+TGG | + | chr7_2:71019613-71019632 | None:intergenic | 15.0% |
| !! | ATCCTAAAAAAATATTCACT+AGG | - | chr7_2:71016971-71016990 | Msa1073490:intron | 20.0% |
| !!! | ATCCTAGTGAATATTTTTTT+AGG | + | chr7_2:71016976-71016995 | None:intergenic | 20.0% |
| !!! | GGTTTATTTTTTGTGTTTAT+GGG | + | chr7_2:71017198-71017217 | None:intergenic | 20.0% |
| !! | ACAACATTATCATAGTATAA+TGG | + | chr7_2:71017533-71017552 | None:intergenic | 20.0% |
| !!! | TACCATGTTAATGTTTTTTT+TGG | - | chr7_2:71017569-71017588 | Msa1073490:CDS | 20.0% |
| !! | CTTTATAATGTTAGATTAGA+TGG | - | chr7_2:71017918-71017937 | Msa1073490:intron | 20.0% |
| !! | TTAAAGTGGACAATAAATAT+TGG | + | chr7_2:71018109-71018128 | None:intergenic | 20.0% |
| !!! | ACATGATCAATAATTGTTTT+AGG | + | chr7_2:71018251-71018270 | None:intergenic | 20.0% |
| !! | TTGAGAACATAAAATTTAGT+AGG | - | chr7_2:71018484-71018503 | Msa1073490:intron | 20.0% |
| !! | ACTATAGATTCATTCTAATT+TGG | - | chr7_2:71018515-71018534 | Msa1073490:intron | 20.0% |
| !!! | AAAAGATTTTGTTTCCAAAA+AGG | - | chr7_2:71018658-71018677 | Msa1073490:intron | 20.0% |
| !!! | AAAGATTTTGTTTCCAAAAA+GGG | - | chr7_2:71018659-71018678 | Msa1073490:intron | 20.0% |
| !! | TATTACCTATTAATTCTTGA+AGG | + | chr7_2:71018870-71018889 | None:intergenic | 20.0% |
| !!! | TTATTTCTATTTTTCCACTT+TGG | - | chr7_2:71018914-71018933 | Msa1073490:intron | 20.0% |
| !! | TATAATTAAAATGACCAAAG+TGG | + | chr7_2:71018931-71018950 | None:intergenic | 20.0% |
| !! | TTGTATGATGATAAATCATT+TGG | - | chr7_2:71019346-71019365 | Msa1073490:five_prime_UTR | 20.0% |
| ! | CAAATTGATCTTGAATTACA+TGG | + | chr7_2:71017066-71017085 | None:intergenic | 25.0% |
| ! | CATGTAATTCAAGATCAATT+TGG | - | chr7_2:71017064-71017083 | Msa1073490:three_prime_UTR | 25.0% |
| ! | TTTGGAAAATTTGCAAGATT+TGG | - | chr7_2:71017082-71017101 | Msa1073490:three_prime_UTR | 25.0% |
| ! | TTGGAAAATTTGCAAGATTT+GGG | - | chr7_2:71017083-71017102 | Msa1073490:three_prime_UTR | 25.0% |
| !!! | TTATTTTTTGTGTTTATGGG+AGG | + | chr7_2:71017195-71017214 | None:intergenic | 25.0% |
| !!! | GGGTTTATTTTTTGTGTTTA+TGG | + | chr7_2:71017199-71017218 | None:intergenic | 25.0% |
| ! | AAGGATTAAAAGAAGGTAAA+TGG | + | chr7_2:71017323-71017342 | None:intergenic | 25.0% |
| ! | TCATCAGATTATGCTATATT+TGG | + | chr7_2:71017474-71017493 | None:intergenic | 25.0% |
| !!! | CATAATCTGATGAACTTTTT+TGG | - | chr7_2:71017481-71017500 | Msa1073490:CDS | 25.0% |
| !! | ATGGATTATGTGTTTAAGAA+AGG | + | chr7_2:71017514-71017533 | None:intergenic | 25.0% |
| ! | GTCCAAAAAAAACATTAACA+TGG | + | chr7_2:71017574-71017593 | None:intergenic | 25.0% |
| ! | TAACAGAATGAATGAATGAA+TGG | - | chr7_2:71017685-71017704 | Msa1073490:intron | 25.0% |
| !!! | TTAGATTAGATGGTTTTTTC+TGG | - | chr7_2:71017928-71017947 | Msa1073490:intron | 25.0% |
| ! | CTATAAAACACAAAAATCCA+AGG | + | chr7_2:71017966-71017985 | None:intergenic | 25.0% |
| !! | CTTGGATTTTTGTGTTTTAT+AGG | - | chr7_2:71017964-71017983 | Msa1073490:intron | 25.0% |
| !! | TTTTTGTGTTTTATAGGAAG+TGG | - | chr7_2:71017970-71017989 | Msa1073490:intron | 25.0% |
| !!! | TGATTTGCTTAAGAAAATCA+AGG | - | chr7_2:71018042-71018061 | Msa1073490:intron | 25.0% |
| ! | TTAAAAGATATAGATGAGTC+AGG | + | chr7_2:71018086-71018105 | None:intergenic | 25.0% |
| ! | TTGATATAAGTCAAATCGAT+CGG | - | chr7_2:71018203-71018222 | Msa1073490:intron | 25.0% |
| !!! | TTTTTTGATCTCAGACAAAA+GGG | + | chr7_2:71018318-71018337 | None:intergenic | 25.0% |
| !!! | TTTTTTTGATCTCAGACAAA+AGG | + | chr7_2:71018319-71018338 | None:intergenic | 25.0% |
| !! | TTTAACCATCCAGTTTTTAA+AGG | - | chr7_2:71018350-71018369 | Msa1073490:intron | 25.0% |
| !!! | TTGATTTGGATCTTTCAATT+TGG | + | chr7_2:71019079-71019098 | None:intergenic | 25.0% |
| !!! | TTTTGTTCTGTTTCTTGATT+TGG | + | chr7_2:71019093-71019112 | None:intergenic | 25.0% |
| !! | TTAAATATTAACTTGGGTGT+TGG | - | chr7_2:71019423-71019442 | Msa1073490:five_prime_UTR | 25.0% |
| ! | CATATGAAACAAAATTGGAA+GGG | + | chr7_2:71019513-71019532 | None:intergenic | 25.0% |
| ! | TCATATGAAACAAAATTGGA+AGG | + | chr7_2:71019514-71019533 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGGATGTTGAGAG+TGG | + | chr7_2:71016963-71016982 | None:intergenic | 30.0% |
| AGAAGCAAAGAAATGGAAAA+TGG | + | chr7_2:71017281-71017300 | None:intergenic | 30.0% | |
| AAGTGAAAGAAGCAAAGAAA+TGG | + | chr7_2:71017288-71017307 | None:intergenic | 30.0% | |
| ! | ACCTTCTTTTAATCCTTAGT+TGG | - | chr7_2:71017326-71017345 | Msa1073490:CDS | 30.0% |
| TCCAACTAAGGATTAAAAGA+AGG | + | chr7_2:71017330-71017349 | None:intergenic | 30.0% | |
| TAATCCTTAGTTGGAGAAAA+TGG | - | chr7_2:71017335-71017354 | Msa1073490:CDS | 30.0% | |
| AATCCTTAGTTGGAGAAAAT+GGG | - | chr7_2:71017336-71017355 | Msa1073490:CDS | 30.0% | |
| CTCAAAACATCTTCATATCA+AGG | - | chr7_2:71017435-71017454 | Msa1073490:CDS | 30.0% | |
| ! | TCATATCAAGGTAACTTTTG+AGG | - | chr7_2:71017447-71017466 | Msa1073490:CDS | 30.0% |
| ! | CATATCAAGGTAACTTTTGA+GGG | - | chr7_2:71017448-71017467 | Msa1073490:CDS | 30.0% |
| !!! | TGGACTTTTTGTTTTCACAA+TGG | - | chr7_2:71017705-71017724 | Msa1073490:intron | 30.0% |
| GAAATACAGATGGTGTATTT+GGG | + | chr7_2:71017804-71017823 | None:intergenic | 30.0% | |
| TGATTGTTAGGAAATACAGA+TGG | + | chr7_2:71017814-71017833 | None:intergenic | 30.0% | |
| TGTATTTCCTAACAATCATC+AGG | - | chr7_2:71017816-71017835 | Msa1073490:intron | 30.0% | |
| AACTATACCTGATGATTGTT+AGG | + | chr7_2:71017826-71017845 | None:intergenic | 30.0% | |
| TTGAAAAAGTTACTGCATCA+AGG | + | chr7_2:71017898-71017917 | None:intergenic | 30.0% | |
| AAGAAAATCAAGGTAAGCTT+TGG | - | chr7_2:71018052-71018071 | Msa1073490:intron | 30.0% | |
| AACTACGTTGTTTGAGAAAA+GGG | + | chr7_2:71018161-71018180 | None:intergenic | 30.0% | |
| TAACTACGTTGTTTGAGAAA+AGG | + | chr7_2:71018162-71018181 | None:intergenic | 30.0% | |
| ACAACGTAGTTAGATTCAAA+TGG | - | chr7_2:71018170-71018189 | Msa1073490:intron | 30.0% | |
| !! | CTTTTCCTTTAAAAACTGGA+TGG | + | chr7_2:71018358-71018377 | None:intergenic | 30.0% |
| !! | GACTCTTTTCCTTTAAAAAC+TGG | + | chr7_2:71018362-71018381 | None:intergenic | 30.0% |
| ATTGCTGAAAGTTATCAACT+TGG | - | chr7_2:71018547-71018566 | Msa1073490:intron | 30.0% | |
| ! | TTTTCCACTGAAAACAAATC+AGG | - | chr7_2:71018621-71018640 | Msa1073490:CDS | 30.0% |
| !! | ATACAAAAGTATGCCCTTTT+TGG | + | chr7_2:71018675-71018694 | None:intergenic | 30.0% |
| GAGAGAATCTTATAAGTCTT+TGG | + | chr7_2:71018782-71018801 | None:intergenic | 30.0% | |
| AAGATTCTCTCTGATATTAC+AGG | - | chr7_2:71018791-71018810 | Msa1073490:intron | 30.0% | |
| ATGTGCCTTCAAGAATTAAT+AGG | - | chr7_2:71018862-71018881 | Msa1073490:CDS | 30.0% | |
| TATCAAATGTAACAGATGCT+TGG | - | chr7_2:71018975-71018994 | Msa1073490:intron | 30.0% | |
| ! | TTTAAATCTGATAGCCTTAC+AGG | + | chr7_2:71019030-71019049 | None:intergenic | 30.0% |
| !!! | AATTTGGTTTTCTTCATGTG+AGG | + | chr7_2:71019063-71019082 | None:intergenic | 30.0% |
| !! | ACTCTTTCTCTTGTTATTGT+TGG | + | chr7_2:71019262-71019281 | None:intergenic | 30.0% |
| TTGGTTTATATAGGCTCTAT+AGG | - | chr7_2:71019442-71019461 | Msa1073490:five_prime_UTR | 30.0% | |
| ATTTCCAGGAAATGTTTACA+GGG | + | chr7_2:71019487-71019506 | None:intergenic | 30.0% | |
| TATTTCCAGGAAATGTTTAC+AGG | + | chr7_2:71019488-71019507 | None:intergenic | 30.0% | |
| AATTTAAATGTGTAGGAGCA+TGG | - | chr7_2:71019549-71019568 | Msa1073490:five_prime_UTR | 30.0% | |
| ! | TTTTGGCAAAAGCTACATTT+TGG | + | chr7_2:71019724-71019743 | None:intergenic | 30.0% |
| TTATGGGAGGAATATGAGAT+TGG | + | chr7_2:71017182-71017201 | None:intergenic | 35.0% | |
| ! | ATTCCCATTTTCTCCAACTA+AGG | + | chr7_2:71017342-71017361 | None:intergenic | 35.0% |
| TTAGTTGGAGAAAATGGGAA+TGG | - | chr7_2:71017341-71017360 | Msa1073490:CDS | 35.0% | |
| ! | AGAGTCACAGTTTCATGTTT+TGG | - | chr7_2:71017368-71017387 | Msa1073490:CDS | 35.0% |
| ! | TTGATGACAGCATCATAGAT+AGG | - | chr7_2:71017394-71017413 | Msa1073490:CDS | 35.0% |
| TAGATAGGAAGCTTATTGAG+AGG | - | chr7_2:71017409-71017428 | Msa1073490:CDS | 35.0% | |
| !!! | TAGCAAGGCTTTAGAGTTTT+TGG | - | chr7_2:71017750-71017769 | Msa1073490:intron | 35.0% |
| !!! | AGCAAGGCTTTAGAGTTTTT+GGG | - | chr7_2:71017751-71017770 | Msa1073490:intron | 35.0% |
| GGAAATACAGATGGTGTATT+TGG | + | chr7_2:71017805-71017824 | None:intergenic | 35.0% | |
| !! | TCTGGAATTCTGAAATTCCT+TGG | - | chr7_2:71017946-71017965 | Msa1073490:intron | 35.0% |
| ! | TTGTGTTTTATAGGAAGTGG+AGG | - | chr7_2:71017973-71017992 | Msa1073490:intron | 35.0% |
| ATAACAGATTACTGTATGCC+TGG | - | chr7_2:71018007-71018026 | Msa1073490:intron | 35.0% | |
| AGATATAGATGAGTCAGGAA+TGG | + | chr7_2:71018081-71018100 | None:intergenic | 35.0% | |
| GCTAGAAAGAGTGATTAAAG+TGG | + | chr7_2:71018123-71018142 | None:intergenic | 35.0% | |
| ! | TTTTAGGCATAGACCAAACT+CGG | + | chr7_2:71018235-71018254 | None:intergenic | 35.0% |
| !! | GGACTTGCTAATATGAAGTA+CGG | + | chr7_2:71018297-71018316 | None:intergenic | 35.0% |
| AATCGAAATCGAATTCTGGT+TGG | + | chr7_2:71018433-71018452 | None:intergenic | 35.0% | |
| GAGAAATCGAAATCGAATTC+TGG | + | chr7_2:71018437-71018456 | None:intergenic | 35.0% | |
| !! | TGGAAAACTGAAAAGCATTC+AGG | + | chr7_2:71018608-71018627 | None:intergenic | 35.0% |
| !!! | TGAACCTGATTTGTTTTCAG+TGG | + | chr7_2:71018628-71018647 | None:intergenic | 35.0% |
| ! | TCTTATAAGTCTTTGGTTCC+AGG | + | chr7_2:71018775-71018794 | None:intergenic | 35.0% |
| ATCATTGAGAAACATACCAG+TGG | - | chr7_2:71018821-71018840 | Msa1073490:CDS | 35.0% | |
| ! | AGTTTTTCTTGAAGCCTGTA+AGG | - | chr7_2:71019013-71019032 | Msa1073490:intron | 35.0% |
| CAATAACAAGAGAAAGAGTG+TGG | - | chr7_2:71019263-71019282 | Msa1073490:CDS | 35.0% | |
| !! | ACTTGGGTGTTGGTTTATAT+AGG | - | chr7_2:71019433-71019452 | Msa1073490:five_prime_UTR | 35.0% |
| AATTGGAAGGGAATATTTCC+AGG | + | chr7_2:71019501-71019520 | None:intergenic | 35.0% | |
| AAATCATGTCGCTAAACTCA+CGG | + | chr7_2:71019692-71019711 | None:intergenic | 35.0% | |
| ! | GCAAGATTTGGGATGAAATC+TGG | - | chr7_2:71017094-71017113 | Msa1073490:three_prime_UTR | 40.0% |
| ! | GATTTGGGATGAAATCTGGT+CGG | - | chr7_2:71017098-71017117 | Msa1073490:three_prime_UTR | 40.0% |
| ! | GCAGTTACTACAGTTGATTC+TGG | - | chr7_2:71017727-71017746 | Msa1073490:intron | 40.0% |
| ! | TACAGTTGATTCTGGTAGCA+AGG | - | chr7_2:71017735-71017754 | Msa1073490:intron | 40.0% |
| TACAGATGGTGTATTTGGGT+TGG | + | chr7_2:71017800-71017819 | None:intergenic | 40.0% | |
| GGAAAAGAGTCTTTGCAATC+CGG | - | chr7_2:71018371-71018390 | Msa1073490:intron | 40.0% | |
| GCATTCAGGTGAATTATTGC+TGG | + | chr7_2:71018594-71018613 | None:intergenic | 40.0% | |
| TGTGCAACACTTATTCAACC+TGG | - | chr7_2:71018754-71018773 | Msa1073490:intron | 40.0% | |
| TCAGATGACATAATCACCAC+TGG | + | chr7_2:71018840-71018859 | None:intergenic | 40.0% | |
| CAAATGTAACAGATGCTTGG+AGG | - | chr7_2:71018978-71018997 | Msa1073490:intron | 40.0% | |
| AGAACAAGACCAAGATACAG+TGG | - | chr7_2:71019312-71019331 | Msa1073490:five_prime_UTR | 40.0% | |
| TGTTCCCTGTAAACATTTCC+TGG | - | chr7_2:71019480-71019499 | Msa1073490:five_prime_UTR | 40.0% | |
| !! | TGTAGGAGCATGGTTGTTTT+CGG | - | chr7_2:71019559-71019578 | Msa1073490:five_prime_UTR | 40.0% |
| AATCATGTCGCTAAACTCAC+GGG | + | chr7_2:71019691-71019710 | None:intergenic | 40.0% | |
| ! | GCTTTGTGGGATGTGGATTT+TGG | - | chr7_2:71017126-71017145 | Msa1073490:three_prime_UTR | 45.0% |
| ! | TTGTGGGATGTGGATTTTGG+TGG | - | chr7_2:71017129-71017148 | Msa1073490:three_prime_UTR | 45.0% |
| !! | TGTGGGATGTGGATTTTGGT+GGG | - | chr7_2:71017130-71017149 | Msa1073490:three_prime_UTR | 45.0% |
| ! | ACCCATCTTTTCCTTCCTCA+AGG | - | chr7_2:71017215-71017234 | Msa1073490:three_prime_UTR | 45.0% |
| CCCTTGAGGAAGGAAAAGAT+GGG | + | chr7_2:71017219-71017238 | None:intergenic | 45.0% | |
| ! | CCCATCTTTTCCTTCCTCAA+GGG | - | chr7_2:71017216-71017235 | Msa1073490:three_prime_UTR | 45.0% |
| ACCCTTGAGGAAGGAAAAGA+TGG | + | chr7_2:71017220-71017239 | None:intergenic | 45.0% | |
| TGTTCTTCTCTTGACCCTTG+AGG | + | chr7_2:71017233-71017252 | None:intergenic | 45.0% | |
| AAATCATAGCCTGTCATGCC+AGG | + | chr7_2:71018028-71018047 | None:intergenic | 45.0% | |
| CGATCGGAAATATCCGAGTT+TGG | - | chr7_2:71018219-71018238 | Msa1073490:intron | 45.0% | |
| AGTCTTTGCAATCCGGAGTT+CGG | - | chr7_2:71018378-71018397 | Msa1073490:intron | 45.0% | |
| TGTAACAGATGCTTGGAGGA+AGG | - | chr7_2:71018982-71019001 | Msa1073490:intron | 45.0% | |
| GTAGCAATGCCACTGTATCT+TGG | + | chr7_2:71019324-71019343 | None:intergenic | 45.0% | |
| ATCATGTCGCTAAACTCACG+GGG | + | chr7_2:71019690-71019709 | None:intergenic | 45.0% | |
| !!! | TAATGTTTATTTATTTATTT+TGG | - | chr7_2:71017638-71017657 | Msa1073490:intron | 5.0% |
| !! | TTAAAAATTAAATATTAACT+TGG | - | chr7_2:71019416-71019435 | Msa1073490:five_prime_UTR | 5.0% |
| !! | TAAAAATTAAATATTAACTT+GGG | - | chr7_2:71019417-71019436 | Msa1073490:five_prime_UTR | 5.0% |
| TCTGGTCGGATCTTGCTTTG+TGG | - | chr7_2:71017112-71017131 | Msa1073490:three_prime_UTR | 50.0% | |
| CTGGTCGGATCTTGCTTTGT+GGG | - | chr7_2:71017113-71017132 | Msa1073490:three_prime_UTR | 50.0% | |
| GGATCTTGCTTTGTGGGATG+TGG | - | chr7_2:71017119-71017138 | Msa1073490:three_prime_UTR | 50.0% | |
| CTTCTCTTGACCCTTGAGGA+AGG | + | chr7_2:71017229-71017248 | None:intergenic | 50.0% | |
| TACTGTATGCCTGGCATGAC+AGG | - | chr7_2:71018016-71018035 | Msa1073490:intron | 50.0% | |
| TTTGCAATCCGGAGTTCGGT+CGG | - | chr7_2:71018382-71018401 | Msa1073490:intron | 50.0% | |
| CTTAATTCCCGACCGAACTC+CGG | + | chr7_2:71018393-71018412 | None:intergenic | 50.0% | |
| TTGCAATCCGGAGTTCGGTC+GGG | - | chr7_2:71018383-71018402 | Msa1073490:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 71016895 | 71019748 | 71016895 | ID=Msa1073490;Name=Msa1073490 |
| chr7_2 | mRNA | 71016895 | 71019748 | 71016895 | ID=Msa1073490-mRNA-1;Parent=Msa1073490;Name=Msa1073490-mRNA-1;_AED=0.19;_eAED=0.19;_QI=459|1|1|1|0.8|0.66|6|328|240 |
| chr7_2 | exon | 71016895 | 71016951 | 71016895 | ID=Msa1073490-mRNA-1:exon:16082;Parent=Msa1073490-mRNA-1 |
| chr7_2 | exon | 71017019 | 71017653 | 71017019 | ID=Msa1073490-mRNA-1:exon:16081;Parent=Msa1073490-mRNA-1 |
| chr7_2 | exon | 71017760 | 71017830 | 71017760 | ID=Msa1073490-mRNA-1:exon:16080;Parent=Msa1073490-mRNA-1 |
| chr7_2 | exon | 71018580 | 71018657 | 71018580 | ID=Msa1073490-mRNA-1:exon:16079;Parent=Msa1073490-mRNA-1 |
| chr7_2 | exon | 71018806 | 71018912 | 71018806 | ID=Msa1073490-mRNA-1:exon:16078;Parent=Msa1073490-mRNA-1 |
| chr7_2 | exon | 71019187 | 71019748 | 71019187 | ID=Msa1073490-mRNA-1:exon:16077;Parent=Msa1073490-mRNA-1 |
| chr7_2 | five_prime_UTR | 71019290 | 71019748 | 71019290 | ID=Msa1073490-mRNA-1:five_prime_utr;Parent=Msa1073490-mRNA-1 |
| chr7_2 | CDS | 71019187 | 71019289 | 71019187 | ID=Msa1073490-mRNA-1:cds;Parent=Msa1073490-mRNA-1 |
| chr7_2 | CDS | 71018806 | 71018912 | 71018806 | ID=Msa1073490-mRNA-1:cds;Parent=Msa1073490-mRNA-1 |
| chr7_2 | CDS | 71018580 | 71018657 | 71018580 | ID=Msa1073490-mRNA-1:cds;Parent=Msa1073490-mRNA-1 |
| chr7_2 | CDS | 71017760 | 71017830 | 71017760 | ID=Msa1073490-mRNA-1:cds;Parent=Msa1073490-mRNA-1 |
| chr7_2 | CDS | 71017290 | 71017653 | 71017290 | ID=Msa1073490-mRNA-1:cds;Parent=Msa1073490-mRNA-1 |
| chr7_2 | three_prime_UTR | 71017019 | 71017289 | 71017019 | ID=Msa1073490-mRNA-1:three_prime_utr;Parent=Msa1073490-mRNA-1 |
| chr7_2 | three_prime_UTR | 71016895 | 71016951 | 71016895 | ID=Msa1073490-mRNA-1:three_prime_utr;Parent=Msa1073490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
