Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024710 | sp|Q9LXM8|RLA24_ARATH | 72.857 | 70 | 19 | 0 | 1 | 70 | 1 | 70 | 6.57e-27 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024710 | A0A2Z6PEM2 | 92.857 | 70 | 5 | 0 | 1 | 70 | 34 | 103 | 5.92e-35 | 128 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0024710 | 0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0003720 | Msa0024710 | 0.805040 | 1.617211e-49 | -8.615850e-47 |
| Msa0012940 | Msa0024710 | 0.803156 | 3.988248e-49 | -8.615850e-47 |
| Msa0020390 | Msa0024710 | 0.806626 | 7.508713e-50 | -8.615850e-47 |
| Msa0024710 | Msa0027260 | 0.814347 | 1.613476e-51 | -8.615850e-47 |
| Msa0024710 | Msa0028930 | 0.804482 | 2.115115e-49 | -8.615850e-47 |
| Msa0024710 | Msa0031820 | 0.800605 | 1.332386e-48 | -8.615850e-47 |
| Msa0024710 | Msa0032090 | 0.802635 | 5.110243e-49 | -8.615850e-47 |
| Msa0024710 | Msa0033880 | 0.821996 | 2.999786e-53 | -8.615850e-47 |
| Msa0024710 | Msa0035120 | 0.851434 | 8.897460e-61 | -8.615850e-47 |
| Msa0024710 | Msa0035130 | 0.830638 | 2.623300e-55 | -8.615850e-47 |
| Msa0024710 | Msa0037160 | 0.811890 | 5.583777e-51 | -8.615850e-47 |
| Msa0024710 | Msa0040690 | 0.810186 | 1.306375e-50 | -8.615850e-47 |
| Msa0024710 | Msa0041720 | 0.835724 | 1.420777e-56 | -8.615850e-47 |
| Msa0024710 | Msa0046830 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0024710 | Msa0052610 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
| Msa0024710 | Msa0075170 | 0.813628 | 2.324547e-51 | -8.615850e-47 |
| Msa0024710 | Msa0081360 | 0.804689 | 1.914786e-49 | -8.615850e-47 |
| Msa0024710 | Msa0081650 | 0.804030 | 2.627118e-49 | -8.615850e-47 |
| Msa0024710 | Msa0090570 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0024710 | Msa0093850 | 0.846055 | 2.761164e-59 | -8.615850e-47 |
| Msa0024710 | Msa0097590 | 0.826632 | 2.438526e-54 | -8.615850e-47 |
| Msa0024710 | Msa0097610 | 0.823833 | 1.119705e-53 | -8.615850e-47 |
| Msa0024710 | Msa0098470 | 0.816990 | 4.159480e-52 | -8.615850e-47 |
| Msa0024710 | Msa0106620 | 0.805840 | 1.099381e-49 | -8.615850e-47 |
| Msa0024710 | Msa0106710 | 0.806563 | 7.743025e-50 | -8.615850e-47 |
| Msa0024710 | Msa0115130 | 0.816102 | 6.573791e-52 | -8.615850e-47 |
| Msa0024710 | Msa0118590 | 0.802589 | 5.221479e-49 | -8.615850e-47 |
| Msa0024710 | Msa0118710 | 0.845758 | 3.325524e-59 | -8.615850e-47 |
| Msa0024710 | Msa0125650 | 0.816171 | 6.345625e-52 | -8.615850e-47 |
| Msa0024710 | Msa0127100 | 0.802413 | 5.678060e-49 | -8.615850e-47 |
| Msa0024710 | Msa0127850 | 0.804258 | 2.355289e-49 | -8.615850e-47 |
| Msa0024710 | Msa0128860 | 0.809816 | 1.569457e-50 | -8.615850e-47 |
| Msa0024710 | Msa0130110 | 0.821234 | 4.499843e-53 | -8.615850e-47 |
| Msa0024710 | Msa0138360 | 0.809619 | 1.729985e-50 | -8.615850e-47 |
| Msa0024710 | Msa0144360 | 0.818558 | 1.841518e-52 | -8.615850e-47 |
| Msa0024710 | Msa0167480 | 0.810566 | 1.081382e-50 | -8.615850e-47 |
| Msa0024710 | Msa0174000 | 0.820469 | 6.746001e-53 | -8.615850e-47 |
| Msa0024710 | Msa0174730 | 0.807928 | 3.977863e-50 | -8.615850e-47 |
| Msa0024710 | Msa0183850 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
| Msa0024710 | Msa0187930 | 0.812000 | 5.281957e-51 | -8.615850e-47 |
| Msa0024710 | Msa0188350 | 0.858094 | 1.042803e-62 | -8.615850e-47 |
| Msa0024710 | Msa0189300 | 0.810763 | 9.807580e-51 | -8.615850e-47 |
| Msa0024710 | Msa0194540 | 0.814677 | 1.363704e-51 | -8.615850e-47 |
| Msa0024710 | Msa0205010 | 0.820283 | 7.443813e-53 | -8.615850e-47 |
| Msa0024710 | Msa0207350 | 0.831598 | 1.524668e-55 | -8.615850e-47 |
| Msa0024710 | Msa0214550 | 0.823571 | 1.289275e-53 | -8.615850e-47 |
| Msa0024710 | Msa0217700 | 0.831365 | 1.739480e-55 | -8.615850e-47 |
| Msa0024710 | Msa0221000 | 0.811144 | 8.109175e-51 | -8.615850e-47 |
| Msa0024710 | Msa0225670 | 0.809297 | 2.028850e-50 | -8.615850e-47 |
| Msa0024710 | Msa0230150 | 0.805690 | 1.181711e-49 | -8.615850e-47 |
| Msa0024710 | Msa0231100 | 0.829133 | 6.103324e-55 | -8.615850e-47 |
| Msa0024710 | Msa0231660 | 0.813368 | 2.651855e-51 | -8.615850e-47 |
| Msa0024710 | Msa0240900 | 0.838589 | 2.628482e-57 | -8.615850e-47 |
| Msa0024710 | Msa0241470 | 0.801978 | 6.975074e-49 | -8.615850e-47 |
| Msa0024710 | Msa0241830 | 0.820788 | 5.699722e-53 | -8.615850e-47 |
| Msa0024710 | Msa0244780 | 0.810790 | 9.675194e-51 | -8.615850e-47 |
| Msa0024710 | Msa0257520 | 0.804305 | 2.302495e-49 | -8.615850e-47 |
| Msa0024710 | Msa0261170 | 0.825638 | 4.202365e-54 | -8.615850e-47 |
| Msa0024710 | Msa0262480 | 0.815000 | 1.156875e-51 | -8.615850e-47 |
| Msa0024710 | Msa0267780 | 0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0024710 | Msa0277450 | 0.802482 | 5.494373e-49 | -8.615850e-47 |
| Msa0024710 | Msa0279850 | 0.821476 | 3.957307e-53 | -8.615850e-47 |
| Msa0024710 | Msa0281430 | 0.802408 | 5.691646e-49 | -8.615850e-47 |
| Msa0024710 | Msa0281530 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0024710 | Msa0289580 | 0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0024710 | Msa0289610 | 0.814753 | 1.312261e-51 | -8.615850e-47 |
| Msa0024710 | Msa0296250 | 0.839874 | 1.220440e-57 | -8.615850e-47 |
| Msa0024710 | Msa0296820 | 0.842203 | 2.985111e-58 | -8.615850e-47 |
| Msa0024710 | Msa0300350 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0024710 | Msa0317970 | 0.863825 | 1.887814e-64 | -8.615850e-47 |
| Msa0024710 | Msa0320590 | 0.816818 | 4.544661e-52 | -8.615850e-47 |
| Msa0024710 | Msa0322240 | 0.809531 | 1.807088e-50 | -8.615850e-47 |
| Msa0024710 | Msa0322900 | 0.833709 | 4.564060e-56 | -8.615850e-47 |
| Msa0024710 | Msa0327300 | 0.832597 | 8.633914e-56 | -8.615850e-47 |
| Msa0024710 | Msa0337700 | 0.805473 | 1.312634e-49 | -8.615850e-47 |
| Msa0024710 | Msa0341690 | 0.839298 | 1.722506e-57 | -8.615850e-47 |
| Msa0024710 | Msa0342010 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0024710 | Msa0357900 | 0.834888 | 2.310108e-56 | -8.615850e-47 |
| Msa0024710 | Msa0358890 | 0.810134 | 1.340199e-50 | -8.615850e-47 |
| Msa0024710 | Msa0378720 | 0.807160 | 5.787971e-50 | -8.615850e-47 |
| Msa0024710 | Msa0378970 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0024710 | Msa0382370 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0024710 | Msa0386920 | 0.814088 | 1.841027e-51 | -8.615850e-47 |
| Msa0024710 | Msa0393370 | 0.803753 | 2.999522e-49 | -8.615850e-47 |
| Msa0024710 | Msa0428050 | 0.834264 | 3.314393e-56 | -8.615850e-47 |
| Msa0024710 | Msa0432160 | 0.809032 | 2.311657e-50 | -8.615850e-47 |
| Msa0024710 | Msa0435370 | 0.816911 | 4.330967e-52 | -8.615850e-47 |
| Msa0024710 | Msa0435420 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa0024710 | Msa0443390 | 0.811437 | 7.005734e-51 | -8.615850e-47 |
| Msa0024710 | Msa0450400 | -0.838628 | 2.568159e-57 | -8.615850e-47 |
| Msa0024710 | Msa0451070 | 0.811656 | 6.278350e-51 | -8.615850e-47 |
| Msa0024710 | Msa0456880 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa0024710 | Msa0471420 | 0.803341 | 3.651368e-49 | -8.615850e-47 |
| Msa0024710 | Msa0474390 | 0.821694 | 3.524126e-53 | -8.615850e-47 |
| Msa0024710 | Msa0476680 | 0.812287 | 4.574524e-51 | -8.615850e-47 |
| Msa0024710 | Msa0479200 | 0.836822 | 7.468924e-57 | -8.615850e-47 |
| Msa0024710 | Msa0485240 | 0.833499 | 5.150738e-56 | -8.615850e-47 |
| Msa0024710 | Msa0506400 | 0.803988 | 2.679723e-49 | -8.615850e-47 |
| Msa0024710 | Msa0506670 | 0.823101 | 1.660637e-53 | -8.615850e-47 |
| Msa0024710 | Msa0510290 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0024710 | Msa0518030 | 0.822422 | 2.389662e-53 | -8.615850e-47 |
| Msa0024710 | Msa0518810 | 0.801393 | 9.195644e-49 | -8.615850e-47 |
| Msa0024710 | Msa0521010 | 0.814503 | 1.490148e-51 | -8.615850e-47 |
| Msa0024710 | Msa0521670 | 0.818802 | 1.620786e-52 | -8.615850e-47 |
| Msa0024710 | Msa0526540 | 0.837001 | 6.723574e-57 | -8.615850e-47 |
| Msa0024710 | Msa0531250 | 0.810768 | 9.781673e-51 | -8.615850e-47 |
| Msa0024710 | Msa0531650 | 0.821883 | 3.186700e-53 | -8.615850e-47 |
| Msa0024710 | Msa0532990 | 0.838735 | 2.409686e-57 | -8.615850e-47 |
| Msa0024710 | Msa0571920 | 0.817888 | 2.611002e-52 | -8.615850e-47 |
| Msa0024710 | Msa0572840 | 0.802613 | 5.163817e-49 | -8.615850e-47 |
| Msa0024710 | Msa0576730 | 0.806708 | 7.213167e-50 | -8.615850e-47 |
| Msa0024710 | Msa0576940 | 0.829748 | 4.327577e-55 | -8.615850e-47 |
| Msa0024710 | Msa0581280 | 0.801731 | 7.839940e-49 | -8.615850e-47 |
| Msa0024710 | Msa0588090 | 0.808078 | 3.696187e-50 | -8.615850e-47 |
| Msa0024710 | Msa0592030 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
| Msa0024710 | Msa0593700 | 0.801418 | 9.090821e-49 | -8.615850e-47 |
| Msa0024710 | Msa0607520 | 0.804205 | 2.415777e-49 | -8.615850e-47 |
| Msa0024710 | Msa0615440 | 0.834614 | 2.706441e-56 | -8.615850e-47 |
| Msa0024710 | Msa0615580 | 0.824842 | 6.482151e-54 | -8.615850e-47 |
| Msa0024710 | Msa0619420 | 0.811420 | 7.064168e-51 | -8.615850e-47 |
| Msa0024710 | Msa0620620 | 0.825245 | 5.206362e-54 | -8.615850e-47 |
| Msa0024710 | Msa0628420 | 0.816042 | 6.778854e-52 | -8.615850e-47 |
| Msa0024710 | Msa0638480 | 0.808127 | 3.607174e-50 | -8.615850e-47 |
| Msa0024710 | Msa0647190 | 0.801856 | 7.391913e-49 | -8.615850e-47 |
| Msa0024710 | Msa0647430 | 0.818155 | 2.272258e-52 | -8.615850e-47 |
| Msa0024710 | Msa0658040 | 0.819152 | 1.349337e-52 | -8.615850e-47 |
| Msa0024710 | Msa0658590 | 0.818557 | 1.842481e-52 | -8.615850e-47 |
| Msa0024710 | Msa0672100 | 0.821027 | 5.021011e-53 | -8.615850e-47 |
| Msa0024710 | Msa0693330 | 0.806007 | 1.013842e-49 | -8.615850e-47 |
| Msa0024710 | Msa0698490 | 0.829706 | 4.429566e-55 | -8.615850e-47 |
| Msa0024710 | Msa0698660 | 0.824116 | 9.610242e-54 | -8.615850e-47 |
| Msa0024710 | Msa0725050 | 0.818597 | 1.804350e-52 | -8.615850e-47 |
| Msa0024710 | Msa0738100 | 0.816080 | 6.648414e-52 | -8.615850e-47 |
| Msa0024710 | Msa0760560 | 0.812104 | 5.014811e-51 | -8.615850e-47 |
| Msa0024710 | Msa0780930 | 0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0024710 | Msa0785130 | 0.816739 | 4.734776e-52 | -8.615850e-47 |
| Msa0024710 | Msa0789100 | 0.813681 | 2.263698e-51 | -8.615850e-47 |
| Msa0024710 | Msa0804250 | 0.822643 | 2.122315e-53 | -8.615850e-47 |
| Msa0024710 | Msa0806880 | 0.811298 | 7.508105e-51 | -8.615850e-47 |
| Msa0024710 | Msa0817540 | 0.814448 | 1.532805e-51 | -8.615850e-47 |
| Msa0024710 | Msa0822310 | -0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa0024710 | Msa0822500 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0024710 | Msa0826760 | 0.836145 | 1.111076e-56 | -8.615850e-47 |
| Msa0024710 | Msa0833530 | 0.833536 | 5.040115e-56 | -8.615850e-47 |
| Msa0024710 | Msa0928490 | 0.806931 | 6.471216e-50 | -8.615850e-47 |
| Msa0024710 | Msa0937020 | 0.814190 | 1.747727e-51 | -8.615850e-47 |
| Msa0024710 | Msa0997430 | 0.812950 | 3.274677e-51 | -8.615850e-47 |
| Msa0024710 | Msa1012740 | 0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa0024710 | Msa1029070 | 0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0024710 | Msa1034500 | 0.824959 | 6.082487e-54 | -8.615850e-47 |
| Msa0024710 | Msa1038080 | 0.807566 | 4.747444e-50 | -8.615850e-47 |
| Msa0024710 | Msa1039390 | 0.804654 | 1.947769e-49 | -8.615850e-47 |
| Msa0024710 | Msa1040840 | 0.816316 | 5.889470e-52 | -8.615850e-47 |
| Msa0024710 | Msa1072710 | 0.811249 | 7.694634e-51 | -8.615850e-47 |
| Msa0024710 | Msa1076560 | 0.837475 | 5.086697e-57 | -8.615850e-47 |
| Msa0024710 | Msa1079230 | 0.826333 | 2.874196e-54 | -8.615850e-47 |
| Msa0024710 | Msa1080290 | 0.820108 | 8.163941e-53 | -8.615850e-47 |
| Msa0024710 | Msa1080640 | 0.808552 | 2.927654e-50 | -8.615850e-47 |
| Msa0024710 | Msa1089450 | 0.856082 | 4.091531e-62 | -8.615850e-47 |
| Msa0024710 | Msa1095650 | 0.801443 | 8.981763e-49 | -8.615850e-47 |
| Msa0024710 | Msa1106700 | 0.806360 | 8.544294e-50 | -8.615850e-47 |
| Msa0024710 | Msa1127590 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0024710 | Msa1135890 | 0.863651 | 2.137754e-64 | -8.615850e-47 |
| Msa0024710 | Msa1144880 | 0.800309 | 1.531310e-48 | -8.615850e-47 |
| Msa0024710 | Msa1145810 | 0.800285 | 1.548106e-48 | -8.615850e-47 |
| Msa0024710 | Msa1156160 | 0.825456 | 4.642616e-54 | -8.615850e-47 |
| Msa0024710 | Msa1160740 | -0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0024710 | Msa1162770 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0024710 | Msa1166870 | 0.802181 | 6.338159e-49 | -8.615850e-47 |
| Msa0024710 | Msa1173300 | 0.800686 | 1.282969e-48 | -8.615850e-47 |
| Msa0024710 | Msa1181830 | 0.821929 | 3.108504e-53 | -8.615850e-47 |
| Msa0024710 | Msa1198530 | 0.800850 | 1.187754e-48 | -8.615850e-47 |
| Msa0024710 | Msa1202580 | 0.809117 | 2.217607e-50 | -8.615850e-47 |
| Msa0024710 | Msa1206360 | 0.801963 | 7.026068e-49 | -8.615850e-47 |
| Msa0024710 | Msa1206850 | 0.813201 | 2.885343e-51 | -8.615850e-47 |
| Msa0024710 | Msa1216260 | 0.819396 | 1.187272e-52 | -8.615850e-47 |
| Msa0024710 | Msa1218450 | 0.841907 | 3.574882e-58 | -8.615850e-47 |
| Msa0024710 | Msa1219000 | 0.832229 | 1.064917e-55 | -8.615850e-47 |
| Msa0024710 | Msa1225860 | -0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0024710 | Msa1226470 | 0.808283 | 3.341678e-50 | -8.615850e-47 |
| Msa0024710 | Msa1243870 | 0.801453 | 8.940827e-49 | -8.615850e-47 |
| Msa0024710 | Msa1253550 | 0.806857 | 6.711451e-50 | -8.615850e-47 |
| Msa0024710 | Msa1256850 | 0.815486 | 9.018773e-52 | -8.615850e-47 |
| Msa0024710 | Msa1262890 | 0.862110 | 6.392410e-64 | -8.615850e-47 |
| Msa0024710 | Msa1265590 | 0.861150 | 1.255780e-63 | -8.615850e-47 |
| Msa0024710 | Msa1297970 | 0.805318 | 1.414594e-49 | -8.615850e-47 |
| Msa0024710 | Msa1307600 | 0.805486 | 1.304059e-49 | -8.615850e-47 |
| Msa0024710 | Msa1307870 | 0.838897 | 2.189110e-57 | -8.615850e-47 |
| Msa0024710 | Msa1332760 | 0.802145 | 6.446644e-49 | -8.615850e-47 |
| Msa0024710 | Msa1344340 | 0.809597 | 1.749495e-50 | -8.615850e-47 |
| Msa0024710 | Msa1349570 | 0.807779 | 4.278091e-50 | -8.615850e-47 |
| Msa0024710 | Msa1351540 | 0.820055 | 8.393634e-53 | -8.615850e-47 |
| Msa0024710 | Msa1363330 | 0.835436 | 1.680365e-56 | -8.615850e-47 |
| Msa0024710 | Msa1369690 | 0.802537 | 5.351834e-49 | -8.615850e-47 |
| Msa0024710 | Msa1373820 | 0.839127 | 1.908007e-57 | -8.615850e-47 |
| Msa0024710 | Msa1379760 | 0.806455 | 8.156335e-50 | -8.615850e-47 |
| Msa0024710 | Msa1381480 | 0.816201 | 6.247451e-52 | -8.615850e-47 |
| Msa0024710 | Msa1384870 | 0.827873 | 1.229669e-54 | -8.615850e-47 |
| Msa0024710 | Msa1386600 | 0.835553 | 1.569586e-56 | -8.615850e-47 |
| Msa0024710 | Msa1386710 | 0.801211 | 1.002104e-48 | -8.615850e-47 |
| Msa0024710 | Msa1411950 | 0.819521 | 1.111816e-52 | -8.615850e-47 |
| Msa0024710 | Msa1413500 | 0.806425 | 8.276930e-50 | -8.615850e-47 |
| Msa0024710 | Msa1418240 | 0.834816 | 2.408283e-56 | -8.615850e-47 |
| Msa0024710 | Msa1423350 | 0.804177 | 2.448096e-49 | -8.615850e-47 |
| Msa0024710 | Msa1425880 | 0.832250 | 1.052000e-55 | -8.615850e-47 |
| Msa0024710 | Msa1434740 | 0.807863 | 4.105465e-50 | -8.615850e-47 |
| Msa0024710 | Msa1438280 | 0.809713 | 1.651542e-50 | -8.615850e-47 |
| Msa0024710 | Msa1440310 | 0.869571 | 2.803247e-66 | -8.615850e-47 |
| Msa0024710 | Msa1447180 | 0.841145 | 5.675608e-58 | -8.615850e-47 |
| Msa0024710 | Msa1461540 | 0.837030 | 6.608949e-57 | -8.615850e-47 |
| Msa0024710 | Msa1465260 | 0.840656 | 7.624625e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024710 | MtrunA17_Chr1g0179001 | 95.455 | 66 | 3 | 0 | 1 | 66 | 1 | 66 | 1.73e-36 | 121 |
| Msa0024710 | MtrunA17_Chr2g0321121 | 73.333 | 75 | 20 | 0 | 1 | 75 | 1 | 75 | 1.45e-31 | 108 |
| Msa0024710 | MtrunA17_Chr5g0421491 | 71.212 | 66 | 19 | 0 | 1 | 66 | 1 | 66 | 1.55e-25 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0024710 | AT3G44590.1 | 72.857 | 70 | 19 | 0 | 1 | 70 | 1 | 70 | 6.68e-28 | 99.8 |
| Msa0024710 | AT3G44590.2 | 72.857 | 70 | 19 | 0 | 1 | 70 | 1 | 70 | 6.68e-28 | 99.8 |
| Msa0024710 | AT2G27710.4 | 71.429 | 70 | 20 | 0 | 1 | 70 | 1 | 70 | 6.85e-28 | 99.4 |
| Msa0024710 | AT2G27710.1 | 69.697 | 66 | 20 | 0 | 1 | 66 | 1 | 66 | 4.15e-21 | 82.4 |
| Msa0024710 | AT2G27710.2 | 69.697 | 66 | 20 | 0 | 1 | 66 | 1 | 66 | 4.15e-21 | 82.4 |
| Msa0024710 | AT2G27710.3 | 69.697 | 66 | 20 | 0 | 1 | 66 | 1 | 66 | 4.15e-21 | 82.4 |
| Msa0024710 | AT2G27720.1 | 69.697 | 66 | 20 | 0 | 1 | 66 | 1 | 66 | 7.36e-21 | 82.0 |
| Msa0024710 | AT3G28500.1 | 43.966 | 116 | 59 | 3 | 1 | 112 | 1 | 114 | 1.48e-17 | 73.6 |
| Msa0024710 | AT2G27720.3 | 58.974 | 78 | 20 | 1 | 1 | 66 | 1 | 78 | 3.41e-17 | 72.8 |
| Msa0024710 | AT2G27720.2 | 55.556 | 81 | 21 | 1 | 1 | 66 | 1 | 81 | 6.18e-16 | 69.7 |
| Msa0024710 | AT5G40040.1 | 52.308 | 65 | 31 | 0 | 1 | 65 | 1 | 65 | 3.24e-15 | 67.4 |
Find 40 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATGTTGGAGTTATATTT+TGG | 0.214940 | 1_1:+47404540 | Msa0024710:exon |
| GCCTATTTGCTCGCTGTTCT+TGG | 0.258518 | 1_1:+47402852 | Msa0024710:CDS |
| GAGGATGTCCTTGATGGTTT+TGG | 0.299226 | 1_1:-47402895 | None:intergenic |
| ATAGCTGAGGTTATTGCTTC+TGG | 0.312841 | 1_1:+47403489 | Msa0024710:CDS |
| TTCTTTGCCTCAGCAGCTGC+AGG | 0.352045 | 1_1:-47403591 | None:intergenic |
| TGCTGCTCCTGCAGCTGCTG+AGG | 0.400029 | 1_1:+47403584 | Msa0024710:CDS |
| AAATTGGCATCAGTTCCTTC+TGG | 0.406339 | 1_1:+47403519 | Msa0024710:CDS |
| GCTAAAGCAATAGAAATTGA+TGG | 0.409254 | 1_1:+47404624 | Msa0024710:three_prime_UTR |
| TTTCTTGCAATGCAGGATAT+GGG | 0.416445 | 1_1:+47404438 | Msa0024710:intron |
| TCAATATATTCGAGGGCAAC+TGG | 0.416883 | 1_1:-47404702 | None:intergenic |
| GGTTGTGTTCAGAGATTTCA+AGG | 0.453168 | 1_1:-47402777 | None:intergenic |
| ATCAAGGACATCCTCGGATC+TGG | 0.454124 | 1_1:+47402903 | Msa0024710:CDS |
| GTTTGAGAATGAAATGCAAA+AGG | 0.460697 | 1_1:-47402799 | None:intergenic |
| CGCCGTCAGCGTAAAGATGA+AGG | 0.464823 | 1_1:+47402821 | Msa0024710:exon |
| CAAATAAGAAACGACATGTC+TGG | 0.465023 | 1_1:-47404597 | None:intergenic |
| ACCAAGAACAGCGAGCAAAT+AGG | 0.468861 | 1_1:-47402853 | None:intergenic |
| AGATCCGAGGATGTCCTTGA+TGG | 0.481716 | 1_1:-47402901 | None:intergenic |
| GAGCAGACGCAGAAGATGAT+AGG | 0.489365 | 1_1:+47403430 | Msa0024710:CDS |
| GCATCAGTTCCTTCTGGTGG+TGG | 0.495446 | 1_1:+47403525 | Msa0024710:CDS |
| TCAGTTCCTTCTGGTGGTGG+CGG | 0.512709 | 1_1:+47403528 | Msa0024710:CDS |
| AACCTTCATCTTTACGCTGA+CGG | 0.523625 | 1_1:-47402823 | None:intergenic |
| GCTGCTGCACCTGCGAGTGG+TGG | 0.523717 | 1_1:+47403561 | Msa0024710:CDS |
| GTTGCTGCTGCACCTGCGAG+TGG | 0.531011 | 1_1:+47403558 | Msa0024710:CDS |
| AGCTGCTGAGGCAAAGAAAG+AGG | 0.531573 | 1_1:+47403596 | Msa0024710:CDS |
| TGAGGTTATTGCTTCTGGTA+GGG | 0.533768 | 1_1:+47403494 | Msa0024710:CDS |
| TATTTGCTCGCTGTTCTTGG+TGG | 0.547005 | 1_1:+47402855 | Msa0024710:CDS |
| CTGAGGTTATTGCTTCTGGT+AGG | 0.548098 | 1_1:+47403493 | Msa0024710:CDS |
| GGAGCAGCACCACCACTCGC+AGG | 0.548277 | 1_1:-47403570 | None:intergenic |
| CCCCTCCGCCAAAACCATCA+AGG | 0.565900 | 1_1:+47402887 | Msa0024710:CDS |
| GGCAAAGAAAGAGGAGAAGG+TGG | 0.566691 | 1_1:+47403605 | Msa0024710:CDS |
| TTTGAGAATGAAATGCAAAA+GGG | 0.573087 | 1_1:-47402798 | None:intergenic |
| TGAGGCAAAGAAAGAGGAGA+AGG | 0.574103 | 1_1:+47403602 | Msa0024710:CDS |
| AAAACCATCAAGGACATCCT+CGG | 0.583067 | 1_1:+47402897 | Msa0024710:CDS |
| GCTGTGTATCAATATATTCG+AGG | 0.592134 | 1_1:-47404710 | None:intergenic |
| CTGTGTATCAATATATTCGA+GGG | 0.593876 | 1_1:-47404709 | None:intergenic |
| TTGGCATCAGTTCCTTCTGG+TGG | 0.606228 | 1_1:+47403522 | Msa0024710:CDS |
| GCAACACCGCCACCACCAGA+AGG | 0.663456 | 1_1:-47403534 | None:intergenic |
| TATTGGCAAAGATATAGCTG+AGG | 0.673659 | 1_1:+47403476 | Msa0024710:CDS |
| GAAGAAACGAACCAGATCCG+AGG | 0.673984 | 1_1:-47402914 | None:intergenic |
| GTTGTGTTCAGAGATTTCAA+GGG | 0.697259 | 1_1:-47402776 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTCGATTTTTTTTTAT+CGG | + | chr1_1:47403109-47403128 | Msa0024710:intron | 15.0% |
| !!! | ATTTTTTAGAACTGTTTTTA+AGG | + | chr1_1:47403171-47403190 | Msa0024710:intron | 15.0% |
| !!! | TGATTTCGATTTTTTTTTAT+CGG | + | chr1_1:47403109-47403128 | Msa0024710:intron | 15.0% |
| !!! | ATTTTTTAGAACTGTTTTTA+AGG | + | chr1_1:47403171-47403190 | Msa0024710:intron | 15.0% |
| !!! | TTGTTTTTGTCTGAAATTAT+TGG | + | chr1_1:47403459-47403478 | Msa0024710:CDS | 20.0% |
| !! | AAATGACAAAAAAGATTGAA+TGG | - | chr1_1:47404022-47404041 | None:intergenic | 20.0% |
| !!! | TATACAACTGTAATGTTTTA+TGG | + | chr1_1:47404238-47404257 | Msa0024710:intron | 20.0% |
| !!! | ATACAACTGTAATGTTTTAT+GGG | + | chr1_1:47404239-47404258 | Msa0024710:intron | 20.0% |
| !!! | GTATTTTAGTTTCTTAATGT+TGG | + | chr1_1:47404527-47404546 | Msa0024710:exon | 20.0% |
| !!! | TTAATGTTGGAGTTATATTT+TGG | + | chr1_1:47404540-47404559 | Msa0024710:exon | 20.0% |
| !!! | AGATGCAAATTTTAATTAGA+TGG | - | chr1_1:47404652-47404671 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTCTGAAATTAT+TGG | + | chr1_1:47403459-47403478 | Msa0024710:CDS | 20.0% |
| !! | AAATGACAAAAAAGATTGAA+TGG | - | chr1_1:47404022-47404041 | None:intergenic | 20.0% |
| !!! | TATACAACTGTAATGTTTTA+TGG | + | chr1_1:47404238-47404257 | Msa0024710:intron | 20.0% |
| !!! | ATACAACTGTAATGTTTTAT+GGG | + | chr1_1:47404239-47404258 | Msa0024710:intron | 20.0% |
| !!! | GTATTTTAGTTTCTTAATGT+TGG | + | chr1_1:47404527-47404546 | Msa0024710:exon | 20.0% |
| !!! | TTAATGTTGGAGTTATATTT+TGG | + | chr1_1:47404540-47404559 | Msa0024710:exon | 20.0% |
| !!! | AGATGCAAATTTTAATTAGA+TGG | - | chr1_1:47404652-47404671 | None:intergenic | 20.0% |
| ! | TTTGAGAATGAAATGCAAAA+GGG | - | chr1_1:47402801-47402820 | None:intergenic | 25.0% |
| !! | ATGATGTAAGTTCTTTTTCT+GGG | + | chr1_1:47403646-47403665 | Msa0024710:CDS | 25.0% |
| ! | CACATAATGCAAATTAAACT+AGG | - | chr1_1:47403764-47403783 | None:intergenic | 25.0% |
| !! | TATGTGTTTTATACTCGAAA+AGG | + | chr1_1:47403778-47403797 | Msa0024710:intron | 25.0% |
| ! | TTCAGCATATATATCAAAAG+CGG | - | chr1_1:47403949-47403968 | None:intergenic | 25.0% |
| !! | CTTTTATGTGATTATGTGTA+TGG | + | chr1_1:47404149-47404168 | Msa0024710:intron | 25.0% |
| ! | TCATAGAATCACTCATAATA+TGG | + | chr1_1:47404295-47404314 | Msa0024710:intron | 25.0% |
| ! | AGTAGTTATGTATATTGTCT+TGG | + | chr1_1:47404355-47404374 | Msa0024710:intron | 25.0% |
| !!! | GTTTTGTTTGATATTCAGTT+TGG | + | chr1_1:47404505-47404524 | Msa0024710:CDS | 25.0% |
| ! | TTTGAGAATGAAATGCAAAA+GGG | - | chr1_1:47402801-47402820 | None:intergenic | 25.0% |
| !! | ATGATGTAAGTTCTTTTTCT+GGG | + | chr1_1:47403646-47403665 | Msa0024710:CDS | 25.0% |
| ! | CACATAATGCAAATTAAACT+AGG | - | chr1_1:47403764-47403783 | None:intergenic | 25.0% |
| !! | TATGTGTTTTATACTCGAAA+AGG | + | chr1_1:47403778-47403797 | Msa0024710:intron | 25.0% |
| ! | TTCAGCATATATATCAAAAG+CGG | - | chr1_1:47403949-47403968 | None:intergenic | 25.0% |
| !! | CTTTTATGTGATTATGTGTA+TGG | + | chr1_1:47404149-47404168 | Msa0024710:intron | 25.0% |
| ! | TCATAGAATCACTCATAATA+TGG | + | chr1_1:47404295-47404314 | Msa0024710:intron | 25.0% |
| ! | AGTAGTTATGTATATTGTCT+TGG | + | chr1_1:47404355-47404374 | Msa0024710:intron | 25.0% |
| !!! | GTTTTGTTTGATATTCAGTT+TGG | + | chr1_1:47404505-47404524 | Msa0024710:CDS | 25.0% |
| GTTTGAGAATGAAATGCAAA+AGG | - | chr1_1:47402802-47402821 | None:intergenic | 30.0% | |
| TTTATGCAGTAGCGTAAATT+AGG | + | chr1_1:47403080-47403099 | Msa0024710:intron | 30.0% | |
| TTATGCAGTAGCGTAAATTA+GGG | + | chr1_1:47403081-47403100 | Msa0024710:intron | 30.0% | |
| ATCACATGTGTTAGTTGTAT+CGG | + | chr1_1:47403250-47403269 | Msa0024710:intron | 30.0% | |
| ! | ACACATTCAATTAGAAGTGT+CGG | + | chr1_1:47403305-47403324 | Msa0024710:intron | 30.0% |
| ! | TGATTTGAAACATAACTGAC+AGG | + | chr1_1:47403382-47403401 | Msa0024710:intron | 30.0% |
| ! | GATTTGAAACATAACTGACA+GGG | + | chr1_1:47403383-47403402 | Msa0024710:intron | 30.0% |
| !! | TTTGTTGTTTGATTTGCAGT+TGG | + | chr1_1:47403408-47403427 | Msa0024710:intron | 30.0% |
| ! | GATGATGTAAGTTCTTTTTC+TGG | + | chr1_1:47403645-47403664 | Msa0024710:CDS | 30.0% |
| TTATATGTATGCGCTATAAG+TGG | + | chr1_1:47403712-47403731 | Msa0024710:intron | 30.0% | |
| !!! | AGTGGTTTTAAACTTGCATT+TGG | + | chr1_1:47403730-47403749 | Msa0024710:intron | 30.0% |
| !! | GTTTTAAACTTGCATTTGGT+TGG | + | chr1_1:47403734-47403753 | Msa0024710:intron | 30.0% |
| !! | AAGGTTCTTGATTTGTACTT+AGG | + | chr1_1:47403797-47403816 | Msa0024710:intron | 30.0% |
| TGAACTGTGATTAATAGCTA+TGG | + | chr1_1:47404089-47404108 | Msa0024710:intron | 30.0% | |
| AACATTACAGTTGTATAGCA+AGG | - | chr1_1:47404235-47404254 | None:intergenic | 30.0% | |
| ! | AACTGTAATGTTTTATGGGT+TGG | + | chr1_1:47404243-47404262 | Msa0024710:intron | 30.0% |
| GCTAAAGCAATAGAAATTGA+TGG | + | chr1_1:47404624-47404643 | Msa0024710:three_prime_UTR | 30.0% | |
| CTGTGTATCAATATATTCGA+GGG | - | chr1_1:47404712-47404731 | None:intergenic | 30.0% | |
| GTTTGAGAATGAAATGCAAA+AGG | - | chr1_1:47402802-47402821 | None:intergenic | 30.0% | |
| TTTATGCAGTAGCGTAAATT+AGG | + | chr1_1:47403080-47403099 | Msa0024710:intron | 30.0% | |
| TTATGCAGTAGCGTAAATTA+GGG | + | chr1_1:47403081-47403100 | Msa0024710:intron | 30.0% | |
| ATCACATGTGTTAGTTGTAT+CGG | + | chr1_1:47403250-47403269 | Msa0024710:intron | 30.0% | |
| ! | ACACATTCAATTAGAAGTGT+CGG | + | chr1_1:47403305-47403324 | Msa0024710:intron | 30.0% |
| ! | TGATTTGAAACATAACTGAC+AGG | + | chr1_1:47403382-47403401 | Msa0024710:intron | 30.0% |
| ! | GATTTGAAACATAACTGACA+GGG | + | chr1_1:47403383-47403402 | Msa0024710:intron | 30.0% |
| !! | TTTGTTGTTTGATTTGCAGT+TGG | + | chr1_1:47403408-47403427 | Msa0024710:intron | 30.0% |
| ! | GATGATGTAAGTTCTTTTTC+TGG | + | chr1_1:47403645-47403664 | Msa0024710:CDS | 30.0% |
| TTATATGTATGCGCTATAAG+TGG | + | chr1_1:47403712-47403731 | Msa0024710:intron | 30.0% | |
| !!! | AGTGGTTTTAAACTTGCATT+TGG | + | chr1_1:47403730-47403749 | Msa0024710:intron | 30.0% |
| !! | GTTTTAAACTTGCATTTGGT+TGG | + | chr1_1:47403734-47403753 | Msa0024710:intron | 30.0% |
| !! | AAGGTTCTTGATTTGTACTT+AGG | + | chr1_1:47403797-47403816 | Msa0024710:intron | 30.0% |
| TGAACTGTGATTAATAGCTA+TGG | + | chr1_1:47404089-47404108 | Msa0024710:intron | 30.0% | |
| AACATTACAGTTGTATAGCA+AGG | - | chr1_1:47404235-47404254 | None:intergenic | 30.0% | |
| ! | AACTGTAATGTTTTATGGGT+TGG | + | chr1_1:47404243-47404262 | Msa0024710:intron | 30.0% |
| GCTAAAGCAATAGAAATTGA+TGG | + | chr1_1:47404624-47404643 | Msa0024710:three_prime_UTR | 30.0% | |
| CTGTGTATCAATATATTCGA+GGG | - | chr1_1:47404712-47404731 | None:intergenic | 30.0% | |
| GTTGTGTTCAGAGATTTCAA+GGG | - | chr1_1:47402779-47402798 | None:intergenic | 35.0% | |
| CTTCTAATTGAATGTGTGTC+CGG | - | chr1_1:47403302-47403321 | None:intergenic | 35.0% | |
| TATTGGCAAAGATATAGCTG+AGG | + | chr1_1:47403476-47403495 | Msa0024710:CDS | 35.0% | |
| AGCAGTGTTGCATAATTTAG+CGG | + | chr1_1:47403861-47403880 | Msa0024710:intron | 35.0% | |
| ACTAGCCATTATGAAAAACC+CGG | + | chr1_1:47403886-47403905 | Msa0024710:intron | 35.0% | |
| TACTAAAACCGTAATGCAAC+CGG | - | chr1_1:47403908-47403927 | None:intergenic | 35.0% | |
| ! | ACTTCAAAAGTACAAGTTGG+GGG | - | chr1_1:47403995-47404014 | None:intergenic | 35.0% |
| ! | CACTTCAAAAGTACAAGTTG+GGG | - | chr1_1:47403996-47404015 | None:intergenic | 35.0% |
| ! | CCACTTCAAAAGTACAAGTT+GGG | - | chr1_1:47403997-47404016 | None:intergenic | 35.0% |
| ! | ACCACTTCAAAAGTACAAGT+TGG | - | chr1_1:47403998-47404017 | None:intergenic | 35.0% |
| TTTGCTAAACTTTGACGTAG+TGG | + | chr1_1:47404199-47404218 | Msa0024710:intron | 35.0% | |
| TGATTCTATGAAGTCAATGG+CGG | - | chr1_1:47404286-47404305 | None:intergenic | 35.0% | |
| GAGTGATTCTATGAAGTCAA+TGG | - | chr1_1:47404289-47404308 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCAATGCAGGATA+TGG | + | chr1_1:47404437-47404456 | Msa0024710:intron | 35.0% |
| TTTCTTGCAATGCAGGATAT+GGG | + | chr1_1:47404438-47404457 | Msa0024710:intron | 35.0% | |
| CAAATAAGAAACGACATGTC+TGG | - | chr1_1:47404600-47404619 | None:intergenic | 35.0% | |
| GCTGTGTATCAATATATTCG+AGG | - | chr1_1:47404713-47404732 | None:intergenic | 35.0% | |
| GTTGTGTTCAGAGATTTCAA+GGG | - | chr1_1:47402779-47402798 | None:intergenic | 35.0% | |
| CTTCTAATTGAATGTGTGTC+CGG | - | chr1_1:47403302-47403321 | None:intergenic | 35.0% | |
| TATTGGCAAAGATATAGCTG+AGG | + | chr1_1:47403476-47403495 | Msa0024710:CDS | 35.0% | |
| AGCAGTGTTGCATAATTTAG+CGG | + | chr1_1:47403861-47403880 | Msa0024710:intron | 35.0% | |
| ACTAGCCATTATGAAAAACC+CGG | + | chr1_1:47403886-47403905 | Msa0024710:intron | 35.0% | |
| TACTAAAACCGTAATGCAAC+CGG | - | chr1_1:47403908-47403927 | None:intergenic | 35.0% | |
| ! | ACTTCAAAAGTACAAGTTGG+GGG | - | chr1_1:47403995-47404014 | None:intergenic | 35.0% |
| ! | CACTTCAAAAGTACAAGTTG+GGG | - | chr1_1:47403996-47404015 | None:intergenic | 35.0% |
| ! | CCACTTCAAAAGTACAAGTT+GGG | - | chr1_1:47403997-47404016 | None:intergenic | 35.0% |
| ! | ACCACTTCAAAAGTACAAGT+TGG | - | chr1_1:47403998-47404017 | None:intergenic | 35.0% |
| TTTGCTAAACTTTGACGTAG+TGG | + | chr1_1:47404199-47404218 | Msa0024710:intron | 35.0% | |
| TGATTCTATGAAGTCAATGG+CGG | - | chr1_1:47404286-47404305 | None:intergenic | 35.0% | |
| GAGTGATTCTATGAAGTCAA+TGG | - | chr1_1:47404289-47404308 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCAATGCAGGATA+TGG | + | chr1_1:47404437-47404456 | Msa0024710:intron | 35.0% |
| TTTCTTGCAATGCAGGATAT+GGG | + | chr1_1:47404438-47404457 | Msa0024710:intron | 35.0% | |
| CAAATAAGAAACGACATGTC+TGG | - | chr1_1:47404600-47404619 | None:intergenic | 35.0% | |
| GCTGTGTATCAATATATTCG+AGG | - | chr1_1:47404713-47404732 | None:intergenic | 35.0% | |
| GGTTGTGTTCAGAGATTTCA+AGG | - | chr1_1:47402780-47402799 | None:intergenic | 40.0% | |
| AACCTTCATCTTTACGCTGA+CGG | - | chr1_1:47402826-47402845 | None:intergenic | 40.0% | |
| AAAACCATCAAGGACATCCT+CGG | + | chr1_1:47402897-47402916 | Msa0024710:CDS | 40.0% | |
| TATTCGACATTGACCTGTGT+TGG | + | chr1_1:47403273-47403292 | Msa0024710:intron | 40.0% | |
| ! | AAGGTGTCATGTCAAATCAG+TGG | - | chr1_1:47403345-47403364 | None:intergenic | 40.0% |
| TGATTTGACATGACACCTTG+AGG | + | chr1_1:47403346-47403365 | Msa0024710:intron | 40.0% | |
| GATTTGACATGACACCTTGA+GGG | + | chr1_1:47403347-47403366 | Msa0024710:intron | 40.0% | |
| ATTTGACATGACACCTTGAG+GGG | + | chr1_1:47403348-47403367 | Msa0024710:intron | 40.0% | |
| ATAGCTGAGGTTATTGCTTC+TGG | + | chr1_1:47403489-47403508 | Msa0024710:CDS | 40.0% | |
| TGAGGTTATTGCTTCTGGTA+GGG | + | chr1_1:47403494-47403513 | Msa0024710:CDS | 40.0% | |
| TGCTTCTGGTAGGGAAAAAT+TGG | + | chr1_1:47403503-47403522 | Msa0024710:CDS | 40.0% | |
| AAATTGGCATCAGTTCCTTC+TGG | + | chr1_1:47403519-47403538 | Msa0024710:CDS | 40.0% | |
| ATTATGCAACACTGCTACAG+CGG | - | chr1_1:47403857-47403876 | None:intergenic | 40.0% | |
| ! | GGGTTTTTCATAATGGCTAG+TGG | - | chr1_1:47403887-47403906 | None:intergenic | 40.0% |
| ! | TGCAACCGGGTTTTTCATAA+TGG | - | chr1_1:47403894-47403913 | None:intergenic | 40.0% |
| TGAAAAACCCGGTTGCATTA+CGG | + | chr1_1:47403897-47403916 | Msa0024710:intron | 40.0% | |
| ACTAAAACCGTAATGCAACC+GGG | - | chr1_1:47403907-47403926 | None:intergenic | 40.0% | |
| AGCGGTGTAATTGCTATAGA+TGG | - | chr1_1:47403931-47403950 | None:intergenic | 40.0% | |
| !! | CCCAACTTGTACTTTTGAAG+TGG | + | chr1_1:47403994-47404013 | Msa0024710:intron | 40.0% |
| TACAGTTGTATAGCAAGGCA+TGG | - | chr1_1:47404230-47404249 | None:intergenic | 40.0% | |
| !!! | CGACTTTTTTCTTGCAATGC+AGG | + | chr1_1:47404431-47404450 | Msa0024710:intron | 40.0% |
| TCAATATATTCGAGGGCAAC+TGG | - | chr1_1:47404705-47404724 | None:intergenic | 40.0% | |
| GGTTGTGTTCAGAGATTTCA+AGG | - | chr1_1:47402780-47402799 | None:intergenic | 40.0% | |
| AACCTTCATCTTTACGCTGA+CGG | - | chr1_1:47402826-47402845 | None:intergenic | 40.0% | |
| AAAACCATCAAGGACATCCT+CGG | + | chr1_1:47402897-47402916 | Msa0024710:CDS | 40.0% | |
| TATTCGACATTGACCTGTGT+TGG | + | chr1_1:47403273-47403292 | Msa0024710:intron | 40.0% | |
| ! | AAGGTGTCATGTCAAATCAG+TGG | - | chr1_1:47403345-47403364 | None:intergenic | 40.0% |
| TGATTTGACATGACACCTTG+AGG | + | chr1_1:47403346-47403365 | Msa0024710:intron | 40.0% | |
| GATTTGACATGACACCTTGA+GGG | + | chr1_1:47403347-47403366 | Msa0024710:intron | 40.0% | |
| ATTTGACATGACACCTTGAG+GGG | + | chr1_1:47403348-47403367 | Msa0024710:intron | 40.0% | |
| ATAGCTGAGGTTATTGCTTC+TGG | + | chr1_1:47403489-47403508 | Msa0024710:CDS | 40.0% | |
| TGAGGTTATTGCTTCTGGTA+GGG | + | chr1_1:47403494-47403513 | Msa0024710:CDS | 40.0% | |
| TGCTTCTGGTAGGGAAAAAT+TGG | + | chr1_1:47403503-47403522 | Msa0024710:CDS | 40.0% | |
| AAATTGGCATCAGTTCCTTC+TGG | + | chr1_1:47403519-47403538 | Msa0024710:CDS | 40.0% | |
| ATTATGCAACACTGCTACAG+CGG | - | chr1_1:47403857-47403876 | None:intergenic | 40.0% | |
| ! | GGGTTTTTCATAATGGCTAG+TGG | - | chr1_1:47403887-47403906 | None:intergenic | 40.0% |
| ! | TGCAACCGGGTTTTTCATAA+TGG | - | chr1_1:47403894-47403913 | None:intergenic | 40.0% |
| TGAAAAACCCGGTTGCATTA+CGG | + | chr1_1:47403897-47403916 | Msa0024710:intron | 40.0% | |
| ACTAAAACCGTAATGCAACC+GGG | - | chr1_1:47403907-47403926 | None:intergenic | 40.0% | |
| AGCGGTGTAATTGCTATAGA+TGG | - | chr1_1:47403931-47403950 | None:intergenic | 40.0% | |
| !! | CCCAACTTGTACTTTTGAAG+TGG | + | chr1_1:47403994-47404013 | Msa0024710:intron | 40.0% |
| TACAGTTGTATAGCAAGGCA+TGG | - | chr1_1:47404230-47404249 | None:intergenic | 40.0% | |
| !!! | CGACTTTTTTCTTGCAATGC+AGG | + | chr1_1:47404431-47404450 | Msa0024710:intron | 40.0% |
| TCAATATATTCGAGGGCAAC+TGG | - | chr1_1:47404705-47404724 | None:intergenic | 40.0% | |
| ACCAAGAACAGCGAGCAAAT+AGG | - | chr1_1:47402856-47402875 | None:intergenic | 45.0% | |
| TATTTGCTCGCTGTTCTTGG+TGG | + | chr1_1:47402855-47402874 | Msa0024710:CDS | 45.0% | |
| !!! | GATGTCCTTGATGGTTTTGG+CGG | - | chr1_1:47402895-47402914 | None:intergenic | 45.0% |
| !! | GAGGATGTCCTTGATGGTTT+TGG | - | chr1_1:47402898-47402917 | None:intergenic | 45.0% |
| CTGAGGTTATTGCTTCTGGT+AGG | + | chr1_1:47403493-47403512 | Msa0024710:CDS | 45.0% | |
| TGAGGCAAAGAAAGAGGAGA+AGG | + | chr1_1:47403602-47403621 | Msa0024710:CDS | 45.0% | |
| ACCAAGAACAGCGAGCAAAT+AGG | - | chr1_1:47402856-47402875 | None:intergenic | 45.0% | |
| TATTTGCTCGCTGTTCTTGG+TGG | + | chr1_1:47402855-47402874 | Msa0024710:CDS | 45.0% | |
| !!! | GATGTCCTTGATGGTTTTGG+CGG | - | chr1_1:47402895-47402914 | None:intergenic | 45.0% |
| !! | GAGGATGTCCTTGATGGTTT+TGG | - | chr1_1:47402898-47402917 | None:intergenic | 45.0% |
| CTGAGGTTATTGCTTCTGGT+AGG | + | chr1_1:47403493-47403512 | Msa0024710:CDS | 45.0% | |
| TGAGGCAAAGAAAGAGGAGA+AGG | + | chr1_1:47403602-47403621 | Msa0024710:CDS | 45.0% | |
| !!! | ATTTTAATAATTTGATAAAT+CGG | + | chr1_1:47403038-47403057 | Msa0024710:intron | 5.0% |
| !!! | AAAATTTATTTTCTTTTTAT+TGG | + | chr1_1:47404048-47404067 | Msa0024710:intron | 5.0% |
| !!! | ATTTTAATAATTTGATAAAT+CGG | + | chr1_1:47403038-47403057 | Msa0024710:intron | 5.0% |
| !!! | AAAATTTATTTTCTTTTTAT+TGG | + | chr1_1:47404048-47404067 | Msa0024710:intron | 5.0% |
| GCCTATTTGCTCGCTGTTCT+TGG | + | chr1_1:47402852-47402871 | Msa0024710:CDS | 50.0% | |
| !!! | TCCTTGATGGTTTTGGCGGA+GGG | - | chr1_1:47402891-47402910 | None:intergenic | 50.0% |
| AGATCCGAGGATGTCCTTGA+TGG | - | chr1_1:47402904-47402923 | None:intergenic | 50.0% | |
| ATCAAGGACATCCTCGGATC+TGG | + | chr1_1:47402903-47402922 | Msa0024710:CDS | 50.0% | |
| GAAGAAACGAACCAGATCCG+AGG | - | chr1_1:47402917-47402936 | None:intergenic | 50.0% | |
| CATTGACCTGTGTTGGACAC+CGG | + | chr1_1:47403280-47403299 | Msa0024710:intron | 50.0% | |
| GAGCAGACGCAGAAGATGAT+AGG | + | chr1_1:47403430-47403449 | Msa0024710:CDS | 50.0% | |
| TTGGCATCAGTTCCTTCTGG+TGG | + | chr1_1:47403522-47403541 | Msa0024710:CDS | 50.0% | |
| AGCTGCTGAGGCAAAGAAAG+AGG | + | chr1_1:47403596-47403615 | Msa0024710:CDS | 50.0% | |
| GGCAAAGAAAGAGGAGAAGG+TGG | + | chr1_1:47403605-47403624 | Msa0024710:CDS | 50.0% | |
| !! | CAATGGCGGATAGTGATGTG+TGG | - | chr1_1:47404272-47404291 | None:intergenic | 50.0% |
| GCCTATTTGCTCGCTGTTCT+TGG | + | chr1_1:47402852-47402871 | Msa0024710:CDS | 50.0% | |
| !!! | TCCTTGATGGTTTTGGCGGA+GGG | - | chr1_1:47402891-47402910 | None:intergenic | 50.0% |
| AGATCCGAGGATGTCCTTGA+TGG | - | chr1_1:47402904-47402923 | None:intergenic | 50.0% | |
| ATCAAGGACATCCTCGGATC+TGG | + | chr1_1:47402903-47402922 | Msa0024710:CDS | 50.0% | |
| GAAGAAACGAACCAGATCCG+AGG | - | chr1_1:47402917-47402936 | None:intergenic | 50.0% | |
| CATTGACCTGTGTTGGACAC+CGG | + | chr1_1:47403280-47403299 | Msa0024710:intron | 50.0% | |
| GAGCAGACGCAGAAGATGAT+AGG | + | chr1_1:47403430-47403449 | Msa0024710:CDS | 50.0% | |
| TTGGCATCAGTTCCTTCTGG+TGG | + | chr1_1:47403522-47403541 | Msa0024710:CDS | 50.0% | |
| AGCTGCTGAGGCAAAGAAAG+AGG | + | chr1_1:47403596-47403615 | Msa0024710:CDS | 50.0% | |
| GGCAAAGAAAGAGGAGAAGG+TGG | + | chr1_1:47403605-47403624 | Msa0024710:CDS | 50.0% | |
| !! | CAATGGCGGATAGTGATGTG+TGG | - | chr1_1:47404272-47404291 | None:intergenic | 50.0% |
| CGCCGTCAGCGTAAAGATGA+AGG | + | chr1_1:47402821-47402840 | Msa0024710:exon | 55.0% | |
| !!! | CTTGATGGTTTTGGCGGAGG+GGG | - | chr1_1:47402889-47402908 | None:intergenic | 55.0% |
| !!! | CCTTGATGGTTTTGGCGGAG+GGG | - | chr1_1:47402890-47402909 | None:intergenic | 55.0% |
| !!! | GTCCTTGATGGTTTTGGCGG+AGG | - | chr1_1:47402892-47402911 | None:intergenic | 55.0% |
| CAGCGAGTTCAAACCCCTCA+AGG | - | chr1_1:47403364-47403383 | None:intergenic | 55.0% | |
| GCATCAGTTCCTTCTGGTGG+TGG | + | chr1_1:47403525-47403544 | Msa0024710:CDS | 55.0% | |
| !! | TCAGTTCCTTCTGGTGGTGG+CGG | + | chr1_1:47403528-47403547 | Msa0024710:CDS | 55.0% |
| TTCTTTGCCTCAGCAGCTGC+AGG | - | chr1_1:47403594-47403613 | None:intergenic | 55.0% | |
| AGCGGCTGCGATTGACTACA+GGG | - | chr1_1:47403839-47403858 | None:intergenic | 55.0% | |
| CGCCGTCAGCGTAAAGATGA+AGG | + | chr1_1:47402821-47402840 | Msa0024710:exon | 55.0% | |
| !!! | CTTGATGGTTTTGGCGGAGG+GGG | - | chr1_1:47402889-47402908 | None:intergenic | 55.0% |
| !!! | CCTTGATGGTTTTGGCGGAG+GGG | - | chr1_1:47402890-47402909 | None:intergenic | 55.0% |
| !!! | GTCCTTGATGGTTTTGGCGG+AGG | - | chr1_1:47402892-47402911 | None:intergenic | 55.0% |
| CAGCGAGTTCAAACCCCTCA+AGG | - | chr1_1:47403364-47403383 | None:intergenic | 55.0% | |
| GCATCAGTTCCTTCTGGTGG+TGG | + | chr1_1:47403525-47403544 | Msa0024710:CDS | 55.0% | |
| !! | TCAGTTCCTTCTGGTGGTGG+CGG | + | chr1_1:47403528-47403547 | Msa0024710:CDS | 55.0% |
| TTCTTTGCCTCAGCAGCTGC+AGG | - | chr1_1:47403594-47403613 | None:intergenic | 55.0% | |
| AGCGGCTGCGATTGACTACA+GGG | - | chr1_1:47403839-47403858 | None:intergenic | 55.0% | |
| CCCCTCCGCCAAAACCATCA+AGG | + | chr1_1:47402887-47402906 | Msa0024710:CDS | 60.0% | |
| GTGTGTCCGGTGTCCAACAC+AGG | - | chr1_1:47403289-47403308 | None:intergenic | 60.0% | |
| GCGGCTGCGATTGACTACAG+GGG | - | chr1_1:47403838-47403857 | None:intergenic | 60.0% | |
| CAGCGGCTGCGATTGACTAC+AGG | - | chr1_1:47403840-47403859 | None:intergenic | 60.0% | |
| CCCCTCCGCCAAAACCATCA+AGG | + | chr1_1:47402887-47402906 | Msa0024710:CDS | 60.0% | |
| GTGTGTCCGGTGTCCAACAC+AGG | - | chr1_1:47403289-47403308 | None:intergenic | 60.0% | |
| GCGGCTGCGATTGACTACAG+GGG | - | chr1_1:47403838-47403857 | None:intergenic | 60.0% | |
| CAGCGGCTGCGATTGACTAC+AGG | - | chr1_1:47403840-47403859 | None:intergenic | 60.0% | |
| GCAACACCGCCACCACCAGA+AGG | - | chr1_1:47403537-47403556 | None:intergenic | 65.0% | |
| GTTGCTGCTGCACCTGCGAG+TGG | + | chr1_1:47403558-47403577 | Msa0024710:CDS | 65.0% | |
| TGCTGCTCCTGCAGCTGCTG+AGG | + | chr1_1:47403584-47403603 | Msa0024710:CDS | 65.0% | |
| GCAACACCGCCACCACCAGA+AGG | - | chr1_1:47403537-47403556 | None:intergenic | 65.0% | |
| GTTGCTGCTGCACCTGCGAG+TGG | + | chr1_1:47403558-47403577 | Msa0024710:CDS | 65.0% | |
| TGCTGCTCCTGCAGCTGCTG+AGG | + | chr1_1:47403584-47403603 | Msa0024710:CDS | 65.0% | |
| GCTGCTGCACCTGCGAGTGG+TGG | + | chr1_1:47403561-47403580 | Msa0024710:CDS | 70.0% | |
| GGAGCAGCACCACCACTCGC+AGG | - | chr1_1:47403573-47403592 | None:intergenic | 70.0% | |
| GCTGCTGCACCTGCGAGTGG+TGG | + | chr1_1:47403561-47403580 | Msa0024710:CDS | 70.0% | |
| GGAGCAGCACCACCACTCGC+AGG | - | chr1_1:47403573-47403592 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 47402772 | 47404746 | 47402772 | ID=Msa0024710;Name=Msa0024710 |
| chr1_1 | mRNA | 47402772 | 47404746 | 47402772 | ID=Msa0024710-mRNA-1;Parent=Msa0024710;Name=Msa0024710-mRNA-1;_AED=0.06;_eAED=0.06;_QI=65|0.5|0.66|1|0.5|0.66|3|203|139 |
| chr1_1 | exon | 47402772 | 47402924 | 47402772 | ID=Msa0024710-mRNA-1:exon:13492;Parent=Msa0024710-mRNA-1 |
| chr1_1 | exon | 47403427 | 47403667 | 47403427 | ID=Msa0024710-mRNA-1:exon:13493;Parent=Msa0024710-mRNA-1 |
| chr1_1 | exon | 47404453 | 47404746 | 47404453 | ID=Msa0024710-mRNA-1:exon:13494;Parent=Msa0024710-mRNA-1 |
| chr1_1 | five_prime_UTR | 47402772 | 47402836 | 47402772 | ID=Msa0024710-mRNA-1:five_prime_utr;Parent=Msa0024710-mRNA-1 |
| chr1_1 | CDS | 47402837 | 47402924 | 47402837 | ID=Msa0024710-mRNA-1:cds;Parent=Msa0024710-mRNA-1 |
| chr1_1 | CDS | 47403427 | 47403667 | 47403427 | ID=Msa0024710-mRNA-1:cds;Parent=Msa0024710-mRNA-1 |
| chr1_1 | CDS | 47404453 | 47404543 | 47404453 | ID=Msa0024710-mRNA-1:cds;Parent=Msa0024710-mRNA-1 |
| chr1_1 | three_prime_UTR | 47404544 | 47404746 | 47404544 | ID=Msa0024710-mRNA-1:three_prime_utr;Parent=Msa0024710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
