AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040840 MtrunA17_Chr7g0270301 82.828 198 7 2 1 188 1 181 1.54e-111 315
Msa1040840 MtrunA17_Chr6g0450081 82.828 198 7 2 1 188 1 181 1.62e-111 315
Msa1040840 MtrunA17_Chr1g0194261 82.828 198 7 2 1 188 1 181 2.63e-111 315
Msa1040840 MtrunA17_Chr5g0413451 82.323 198 8 2 1 188 1 181 5.73e-111 314
Msa1040840 MtrunA17_Chr5g0413441 82.323 198 8 2 1 188 1 181 5.73e-111 314
Msa1040840 MtrunA17_Chr5g0401761 70.558 197 31 2 1 187 1 180 1.48e-95 275
Msa1040840 MtrunA17_Chr4g0072861 51.531 196 68 2 1 186 1 179 1.42e-65 199
Msa1040840 MtrunA17_Chr5g0395631 52.174 184 81 3 1 184 1 177 6.61e-62 190
Msa1040840 MtrunA17_Chr4g0039591 51.630 184 82 3 1 184 1 177 3.20e-61 188
Msa1040840 MtrunA17_Chr5g0395641 48.404 188 90 2 1 187 1 182 2.13e-60 186
Msa1040840 MtrunA17_Chr1g0188111 47.619 189 90 2 1 188 1 181 9.55e-56 174
Msa1040840 MtrunA17_Chr8g0373271 41.860 172 90 6 18 187 17 180 1.23e-34 120
Msa1040840 MtrunA17_Chr5g0395651 64.865 74 26 0 1 74 1 74 4.77e-30 105
Msa1040840 MtrunA17_Chr2g0287721 33.871 186 103 5 5 180 5 180 1.17e-24 95.5
Msa1040840 MtrunA17_Chr5g0434561 31.522 184 114 4 1 180 1 176 1.82e-19 81.3
Msa1040840 MtrunA17_Chr5g0401071 29.319 191 125 3 1 188 1 184 8.23e-19 79.7
Msa1040840 MtrunA17_Chr4g0012371 29.070 172 112 3 18 187 1 164 6.63e-16 71.6
Msa1040840 MtrunA17_Chr2g0294701 28.261 184 109 3 15 184 18 192 2.28e-13 65.5
Msa1040840 MtrunA17_Chr7g0271761 27.717 184 110 3 15 184 18 192 7.98e-13 63.9
Msa1040840 MtrunA17_Chr5g0395671 51.020 49 24 0 139 187 44 92 1.93e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040840 AT1G10630.1 82.828 198 7 2 1 188 1 181 3.63e-111 315
Msa1040840 AT1G10630.2 82.828 198 7 2 1 188 1 181 3.63e-111 315
Msa1040840 AT5G14670.2 82.323 198 8 2 1 188 1 181 7.91e-111 314
Msa1040840 AT5G14670.3 82.323 198 8 2 1 188 1 181 7.91e-111 314
Msa1040840 AT2G47170.2 82.828 198 7 2 1 188 1 181 1.49e-110 313
Msa1040840 AT2G47170.1 82.828 198 7 2 1 188 1 181 1.49e-110 313
Msa1040840 AT2G47170.3 82.828 198 7 2 1 188 1 181 1.49e-110 313
Msa1040840 AT1G23490.1 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.2 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.7 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.4 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.3 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.1 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.6 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT1G70490.5 82.323 198 8 2 1 188 1 181 3.18e-110 312
Msa1040840 AT5G14670.1 81.818 198 9 2 1 188 1 181 8.84e-110 311
Msa1040840 AT3G62290.3 81.818 198 9 2 1 188 1 181 2.08e-109 310
Msa1040840 AT3G62290.1 81.818 198 9 2 1 188 1 181 2.08e-109 310
Msa1040840 AT3G62290.2 81.818 198 9 2 1 188 1 181 2.08e-109 310
Msa1040840 AT2G15310.1 54.040 198 64 2 1 188 1 181 1.82e-68 207
Msa1040840 AT2G24765.1 50.510 196 70 2 1 186 1 179 1.20e-65 199
Msa1040840 AT5G17060.2 50.000 184 85 3 1 184 1 177 3.09e-60 186
Msa1040840 AT5G17060.1 50.000 184 85 3 1 184 1 177 3.09e-60 186
Msa1040840 AT3G03120.1 50.543 184 84 3 1 184 1 177 1.41e-59 184
Msa1040840 AT3G22950.1 48.677 189 88 2 1 188 1 181 1.59e-58 181
Msa1040840 AT3G22950.2 48.677 189 88 2 1 188 1 181 1.59e-58 181
Msa1040840 AT1G02430.1 44.615 195 87 8 1 183 1 186 3.08e-45 148
Msa1040840 AT1G02440.1 40.838 191 100 6 1 183 1 186 1.55e-41 139
Msa1040840 AT2G24765.2 48.966 145 47 2 1 135 1 128 2.19e-41 136
Msa1040840 AT3G03120.2 49.635 137 62 3 1 137 1 130 4.00e-39 130
Msa1040840 AT2G18390.1 41.860 172 90 6 18 187 17 180 5.65e-34 119
Msa1040840 AT1G02430.2 42.262 168 80 7 1 160 1 159 1.09e-33 117
Msa1040840 AT1G02440.2 32.919 161 65 4 1 160 1 119 1.54e-24 93.2
Msa1040840 AT5G52210.1 32.597 181 106 3 8 180 8 180 3.88e-23 92.0
Msa1040840 AT5G52210.2 32.597 181 106 3 8 180 8 180 3.88e-23 92.0
Msa1040840 AT3G49870.1 30.890 191 120 4 1 187 1 183 8.96e-21 85.1
Msa1040840 AT5G67560.1 30.588 170 110 2 12 180 14 176 2.68e-19 81.3
Msa1040840 AT5G37680.1 31.522 184 114 4 1 180 1 176 3.63e-19 80.9
Msa1040840 AT3G49870.2 29.651 172 111 3 18 187 1 164 3.15e-17 75.5
Msa1040840 AT3G49860.1 29.310 174 113 3 16 187 10 175 8.07e-17 74.7
Msa1040840 AT1G09180.1 30.729 192 98 5 13 184 16 192 2.64e-15 70.9
Msa1040840 AT3G62560.1 28.261 184 109 3 15 184 18 192 4.99e-13 65.1
Msa1040840 AT5G37680.2 30.147 136 86 2 46 180 2 129 6.08e-13 63.5
Msa1040840 AT4G02080.1 27.717 184 110 3 15 184 18 192 1.64e-12 63.5
Msa1040840 AT1G56330.1 28.261 184 109 3 15 184 18 192 1.69e-12 63.5

Find 73 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGATATAGATCGGTGAAAT+TGG 0.179219 7_1:-78321265 None:intergenic
TTCAGAATAATAGTTGAAAA+TGG 0.181951 7_1:+78321381 Msa1040840:exon
AATAGAATTGAAATTGAAAT+TGG 0.186652 7_1:-78321315 None:intergenic
AATTGGAAAATGGAGGAAAT+TGG 0.229441 7_1:+78322796 Msa1040840:CDS
AGGATTCAAATTGAGAAGTA+TGG 0.246836 7_1:+78322750 Msa1040840:CDS
TGATTTCAGATGCTCGGATA+TGG 0.314023 7_1:+78324793 Msa1040840:three_prime_UTR
GACAGGATAAAATTCTAAAC+AGG 0.327920 7_1:-78324820 None:intergenic
TTGTAGAACTGTCAAGTGTT+AGG 0.337074 7_1:+78322730 Msa1040840:intron
TTTCCTTCTTCGCAAATAAC+CGG 0.361975 7_1:-78321429 None:intergenic
TTTCAATTCTAATTGATGTT+TGG 0.373269 7_1:+78321345 Msa1040840:intron
AATTGACAATACAGATCAAT+AGG 0.380708 7_1:-78324934 None:intergenic
GAAGGAAATGCGTATACTTA+TGG 0.381963 7_1:+78321444 Msa1040840:CDS
TCAGCAGCATTCATAGCATT+TGG 0.385055 7_1:-78324396 None:intergenic
CAGCCGGTTATTTGCGAAGA+AGG 0.398980 7_1:+78321426 Msa1040840:CDS
ATTGGAAAATGGAGGAAATT+GGG 0.415188 7_1:+78322797 Msa1040840:CDS
CAGAGGTAGCACATGTGCTC+TGG 0.443544 7_1:-78324562 None:intergenic
ATTCACTTCGTCAGCGTCAC+TGG 0.458451 7_1:+78324442 Msa1040840:CDS
CGATTATGATTTCAGATGCT+CGG 0.465999 7_1:+78324787 Msa1040840:three_prime_UTR
TCAGAATAATAGTTGAAAAT+GGG 0.467560 7_1:+78321382 Msa1040840:exon
AGCTTTACTGTGTGGGATGT+TGG 0.474274 7_1:+78321946 Msa1040840:CDS
TGATATAGATCGGTGAAATT+GGG 0.488182 7_1:-78321264 None:intergenic
ATCAGATCTCTCTTCGTGGT+TGG 0.490939 7_1:-78321174 None:intergenic
CTCAAACAACATTGCAAGCA+AGG 0.495880 7_1:+78324616 Msa1040840:CDS
ATTCTCTATAAGCTCAAGCT+TGG 0.498460 7_1:+78321496 Msa1040840:CDS
GTCACCACCATTCCCACCAT+TGG 0.507944 7_1:+78321526 Msa1040840:CDS
ATTGTAAAACTTACCAATGG+TGG 0.508835 7_1:-78321539 None:intergenic
AAGCTAGGGACGAGCTGCAC+AGG 0.511385 7_1:+78324205 Msa1040840:CDS
GGATTCAAATTGAGAAGTAT+GGG 0.521526 7_1:+78322751 Msa1040840:CDS
TGTGTGGGATGTTGGTGGCC+AGG 0.523027 7_1:+78321954 Msa1040840:CDS
CTTAGTTATTCCGTTAGTCA+AGG 0.523447 7_1:+78324738 Msa1040840:exon
CAGAGCACATGTGCTACCTC+TGG 0.523931 7_1:+78324563 Msa1040840:CDS
AAGCTTGAGCTTATAGAGAA+TGG 0.532263 7_1:-78321494 None:intergenic
GAACATTAGCTTTACTGTGT+GGG 0.534133 7_1:+78321939 Msa1040840:CDS
TATACATAATATAAAAGCTA+TGG 0.535527 7_1:+78324980 Msa1040840:three_prime_UTR
TTTACTGTGTGGGATGTTGG+TGG 0.540094 7_1:+78321949 Msa1040840:CDS
TGAAACAATACATCTTAGAC+AGG 0.542574 7_1:-78324837 None:intergenic
AAATAACCGGCTGAATAGCT+TGG 0.543563 7_1:-78321416 None:intergenic
AATATAGAAATACCTTGTCC+TGG 0.547425 7_1:-78321972 None:intergenic
AGATCGGTGAAATTGGGATG+AGG 0.552708 7_1:-78321258 None:intergenic
ATTTGGTGTAGGGTTTAATG+TGG 0.553247 7_1:+78321900 Msa1040840:intron
GCTGAAATAACTGATAAGCT+AGG 0.555145 7_1:+78324414 Msa1040840:CDS
TTAGTTATTCCGTTAGTCAA+GGG 0.560759 7_1:+78324739 Msa1040840:exon
ATGGGCCCAAAGAGTGATGT+GGG 0.560859 7_1:+78322769 Msa1040840:CDS
GGAGATCAGATCTCTCTTCG+TGG 0.561416 7_1:-78321178 None:intergenic
AGATCGTGTTGTTGAAGCTA+GGG 0.564599 7_1:+78324191 Msa1040840:CDS
GGATGTTGGTGGCCAGGACA+AGG 0.567218 7_1:+78321960 Msa1040840:CDS
AAACTTACCAATGGTGGGAA+TGG 0.569667 7_1:-78321533 None:intergenic
TCGTGAATTGTGATATAGAT+CGG 0.569709 7_1:-78321274 None:intergenic
TAGCTTCAACAACACGATCT+CGG 0.576560 7_1:-78324188 None:intergenic
CATTCACCAAGCTATTCAGC+CGG 0.576922 7_1:+78321410 Msa1040840:CDS
GAGATCGTGTTGTTGAAGCT+AGG 0.579112 7_1:+78324190 Msa1040840:CDS
ATGGTCGGTCTCGATGCCGC+TGG 0.579718 7_1:+78321463 Msa1040840:CDS
TTGTAAAACTTACCAATGGT+GGG 0.580371 7_1:-78321538 None:intergenic
TTCATGCAGCCCTTGACTAA+CGG 0.582219 7_1:-78324748 None:intergenic
TCTGGTGAAGGACTTTATGA+AGG 0.585343 7_1:+78324581 Msa1040840:CDS
GAAAATGAACAAATGTACCT+AGG 0.585507 7_1:+78324869 Msa1040840:three_prime_UTR
ACATGTGCTACCTCTGGTGA+AGG 0.597179 7_1:+78324569 Msa1040840:CDS
GACTTTATGAAGGACTAGAC+TGG 0.599016 7_1:+78324591 Msa1040840:CDS
ATACCGTTCTCAATTCTCAA+AGG 0.609359 7_1:+78321215 Msa1040840:five_prime_UTR
CTTACCAATGGTGGGAATGG+TGG 0.612027 7_1:-78321530 None:intergenic
TATGCAATTGTATTAAACCT+AGG 0.615788 7_1:-78324886 None:intergenic
TATGGGCCCAAAGAGTGATG+TGG 0.622666 7_1:+78322768 Msa1040840:CDS
AGGGTTTAATGTGGAAACTG+TGG 0.625050 7_1:+78321909 Msa1040840:intron
TTCATAAAGTCCTTCACCAG+AGG 0.636014 7_1:-78324579 None:intergenic
AGAACATTAGCTTTACTGTG+TGG 0.640151 7_1:+78321938 Msa1040840:CDS
CTTGAGCTTATAGAGAATGG+TGG 0.640806 7_1:-78321491 None:intergenic
GAAATGCGTATACTTATGGT+CGG 0.647571 7_1:+78321448 Msa1040840:CDS
GGGCCCAAAGAGTGATGTGG+GGG 0.655758 7_1:+78322771 Msa1040840:CDS
GAGAATGGTGGTCTTACCAG+CGG 0.666289 7_1:-78321479 None:intergenic
TTACCTTTGAGAATTGAGAA+CGG 0.678791 7_1:-78321218 None:intergenic
ACAGGATAAAATTCTAAACA+GGG 0.688920 7_1:-78324819 None:intergenic
TGGGCCCAAAGAGTGATGTG+GGG 0.700653 7_1:+78322770 Msa1040840:CDS
GCTGCACAGGATGTTAAACG+AGG 0.784396 7_1:+78324218 Msa1040840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAATTGAAATTGAAAT+TGG - chr7_1:78321318-78321337 None:intergenic 15.0%
!! ATGGTAATTAATAATTATAG+AGG + chr7_1:78321577-78321596 Msa1040840:intron 15.0%
!! TGGTAATTAATAATTATAGA+GGG + chr7_1:78321578-78321597 Msa1040840:intron 15.0%
!! ATAATATTTGCTTATAATAG+TGG - chr7_1:78321725-78321744 None:intergenic 15.0%
!! GATTTACAAATTATGTTATA+AGG + chr7_1:78323004-78323023 Msa1040840:intron 15.0%
!! ACAGATTATTAACAAATATT+AGG - chr7_1:78323574-78323593 None:intergenic 15.0%
!!! ATTAAATTTTAATGTGCATT+GGG - chr7_1:78323908-78323927 None:intergenic 15.0%
!! AACTCAAAGATAAAAATATA+TGG - chr7_1:78324054-78324073 None:intergenic 15.0%
!! TATACATAATATAAAAGCTA+TGG + chr7_1:78324980-78324999 Msa1040840:three_prime_UTR 15.0%
!! TTTCAATTCTAATTGATGTT+TGG + chr7_1:78321345-78321364 Msa1040840:intron 20.0%
!! TTCAGAATAATAGTTGAAAA+TGG + chr7_1:78321381-78321400 Msa1040840:exon 20.0%
!! TCAGAATAATAGTTGAAAAT+GGG + chr7_1:78321382-78321401 Msa1040840:exon 20.0%
!! AATTACCATTGTTTATAGAA+AGG - chr7_1:78321566-78321585 None:intergenic 20.0%
!! ATTATGTAATTATATGTGTC+CGG + chr7_1:78321615-78321634 Msa1040840:intron 20.0%
!!! TTTTGATGATATAGATGATT+TGG + chr7_1:78321883-78321902 Msa1040840:intron 20.0%
!! ATTATAAAACTAGTTACAGT+AGG + chr7_1:78322180-78322199 Msa1040840:intron 20.0%
!! TTATACTAAATAGCATATCA+CGG - chr7_1:78322335-78322354 None:intergenic 20.0%
!! GAATGTATTATTGATAGAAA+AGG - chr7_1:78323231-78323250 None:intergenic 20.0%
!!! TCATTGTTTTTATTTTTGCT+TGG + chr7_1:78323507-78323526 Msa1040840:intron 20.0%
!! TCAAAACAAAATATGTATCT+TGG - chr7_1:78323659-78323678 None:intergenic 20.0%
!!! GATTAAATTTTAATGTGCAT+TGG - chr7_1:78323909-78323928 None:intergenic 20.0%
!! AGATAAAAATATATGGTTAG+AGG - chr7_1:78324047-78324066 None:intergenic 20.0%
!! ATTACTTTCAAAATACACAA+GGG + chr7_1:78324139-78324158 Msa1040840:intron 20.0%
!!! TATTTTGTTATTTGTTTTGC+AGG + chr7_1:78324715-78324734 Msa1040840:intron 20.0%
! CAATTCCTTTCTATAAACAA+TGG + chr7_1:78321558-78321577 Msa1040840:intron 25.0%
!! CAGAGAGAATATTTTATCAA+GGG + chr7_1:78321842-78321861 Msa1040840:intron 25.0%
!! CTATATTTGTGTGTATGTTT+TGG + chr7_1:78321988-78322007 Msa1040840:intron 25.0%
!! TGATTTTATGATATGACGAT+TGG + chr7_1:78322060-78322079 Msa1040840:intron 25.0%
!!! GCTACTCTGTTTTTATTTAT+GGG + chr7_1:78322097-78322116 Msa1040840:intron 25.0%
! AACCATTGTTCTGTTATAAA+AGG - chr7_1:78322244-78322263 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+TGG + chr7_1:78322362-78322381 Msa1040840:intron 25.0%
! TTATACCAAATAGCATATCA+CGG - chr7_1:78322440-78322459 None:intergenic 25.0%
! TCAAATATTAGAAGCTATAG+TGG + chr7_1:78322362-78322381 Msa1040840:intron 25.0%
! AAATAGGATGATGATTCAAT+GGG - chr7_1:78322687-78322706 None:intergenic 25.0%
! AAATGAGTGAAATGACAAAT+AGG - chr7_1:78322703-78322722 None:intergenic 25.0%
! AAATAGGATGATGATTCAAT+GGG - chr7_1:78322687-78322706 None:intergenic 25.0%
! AAATGAGTGAAATGACAAAT+AGG - chr7_1:78322703-78322722 None:intergenic 25.0%
! AAAAGAGATAAATCTCTCTT+TGG - chr7_1:78323088-78323107 None:intergenic 25.0%
!!! TTCGCTTGTTATCTTAATTT+TGG + chr7_1:78323248-78323267 Msa1040840:intron 25.0%
!! TATTAGTTTCATTCCTATCT+GGG + chr7_1:78323309-78323328 Msa1040840:intron 25.0%
!! ATTTAGATTTTATCCCAGAT+AGG - chr7_1:78323325-78323344 None:intergenic 25.0%
! ATGTTGTGAAACAATCATTA+AGG + chr7_1:78323394-78323413 Msa1040840:intron 25.0%
! GTTCTATCGTAAACTATAAT+TGG - chr7_1:78323422-78323441 None:intergenic 25.0%
! TAGTTTACGATAGAACATTA+TGG + chr7_1:78323426-78323445 Msa1040840:intron 25.0%
!!! CACATGACTTGTTAAAATTA+TGG + chr7_1:78323865-78323884 Msa1040840:intron 25.0%
! ATCCTAAACCAATTATACAT+AGG + chr7_1:78323926-78323945 Msa1040840:intron 25.0%
! ACTCTTATGTTTATGAATGT+TGG + chr7_1:78323957-78323976 Msa1040840:intron 25.0%
!! TAATAAGAAAAGCATATCGA+TGG - chr7_1:78324099-78324118 None:intergenic 25.0%
! CATTACTTTCAAAATACACA+AGG + chr7_1:78324138-78324157 Msa1040840:intron 25.0%
! AATGAATGAATGTGAGAATT+TGG + chr7_1:78324258-78324277 Msa1040840:intron 25.0%
! TCTATGGTTATAATATTGTC+AGG + chr7_1:78324323-78324342 Msa1040840:intron 25.0%
!! CTAAATTATGTCAAACCTTT+TGG + chr7_1:78324469-78324488 Msa1040840:intron 25.0%
! AACTCTGCAATTTAAATTAC+AGG + chr7_1:78324664-78324683 Msa1040840:intron 25.0%
! ACAGGATAAAATTCTAAACA+GGG - chr7_1:78324822-78324841 None:intergenic 25.0%
! TATGCAATTGTATTAAACCT+AGG - chr7_1:78324889-78324908 None:intergenic 25.0%
! AATTGACAATACAGATCAAT+AGG - chr7_1:78324937-78324956 None:intergenic 25.0%
!! AATTGAGAACGGTATTTTTG+TGG - chr7_1:78321210-78321229 None:intergenic 30.0%
! TTACCTTTGAGAATTGAGAA+CGG - chr7_1:78321221-78321240 None:intergenic 30.0%
TGATATAGATCGGTGAAATT+GGG - chr7_1:78321267-78321286 None:intergenic 30.0%
TCGTGAATTGTGATATAGAT+CGG - chr7_1:78321277-78321296 None:intergenic 30.0%
TTGTAAAACTTACCAATGGT+GGG - chr7_1:78321541-78321560 None:intergenic 30.0%
ATTGTAAAACTTACCAATGG+TGG - chr7_1:78321542-78321561 None:intergenic 30.0%
GGAATTGTAAAACTTACCAA+TGG - chr7_1:78321545-78321564 None:intergenic 30.0%
ATTTGCTTATAATAGTGGCT+GGG - chr7_1:78321720-78321739 None:intergenic 30.0%
TATTTGCTTATAATAGTGGC+TGG - chr7_1:78321721-78321740 None:intergenic 30.0%
AAACCAGATACAATCTGAAA+AGG + chr7_1:78321796-78321815 Msa1040840:intron 30.0%
AACCAGATACAATCTGAAAA+GGG + chr7_1:78321797-78321816 Msa1040840:intron 30.0%
CCTTGATAAAATATTCTCTC+TGG - chr7_1:78321844-78321863 None:intergenic 30.0%
! CCAGAGAGAATATTTTATCA+AGG + chr7_1:78321841-78321860 Msa1040840:intron 30.0%
!! TGATATAGATGATTTGGTGT+AGG + chr7_1:78321889-78321908 Msa1040840:intron 30.0%
!! GATATAGATGATTTGGTGTA+GGG + chr7_1:78321890-78321909 Msa1040840:intron 30.0%
AATATAGAAATACCTTGTCC+TGG - chr7_1:78321975-78321994 None:intergenic 30.0%
! ATATGACGATTGGTTGAAAT+TGG + chr7_1:78322070-78322089 Msa1040840:intron 30.0%
!!! GGCTACTCTGTTTTTATTTA+TGG + chr7_1:78322096-78322115 Msa1040840:intron 30.0%
TAGAGGTGAAATGAAAGATA+AGG + chr7_1:78322130-78322149 Msa1040840:intron 30.0%
CATTGTTCTGTTATAAAAGG+TGG - chr7_1:78322241-78322260 None:intergenic 30.0%
! CACCTTTTATAACAGAACAA+TGG + chr7_1:78322239-78322258 Msa1040840:intron 30.0%
!! GTTTTAAATAGAAGCTAGAG+TGG + chr7_1:78322261-78322280 Msa1040840:intron 30.0%
CAAATAGGATGATGATTCAA+TGG - chr7_1:78322688-78322707 None:intergenic 30.0%
AGGATTCAAATTGAGAAGTA+TGG + chr7_1:78322750-78322769 Msa1040840:CDS 30.0%
! GGATTCAAATTGAGAAGTAT+GGG + chr7_1:78322751-78322770 Msa1040840:CDS 30.0%
AATTGGAAAATGGAGGAAAT+TGG + chr7_1:78322796-78322815 Msa1040840:CDS 30.0%
ATTGGAAAATGGAGGAAATT+GGG + chr7_1:78322797-78322816 Msa1040840:CDS 30.0%
CAAATAGGATGATGATTCAA+TGG - chr7_1:78322688-78322707 None:intergenic 30.0%
AGGATTCAAATTGAGAAGTA+TGG + chr7_1:78322750-78322769 Msa1040840:CDS 30.0%
! GGATTCAAATTGAGAAGTAT+GGG + chr7_1:78322751-78322770 Msa1040840:CDS 30.0%
AATTGGAAAATGGAGGAAAT+TGG + chr7_1:78322796-78322815 Msa1040840:CDS 30.0%
ATTGGAAAATGGAGGAAATT+GGG + chr7_1:78322797-78322816 Msa1040840:CDS 30.0%
! CTTTTCTGTTAGAACTGTAA+AGG + chr7_1:78323058-78323077 Msa1040840:intron 30.0%
! GAGAGATTTATCTCTTTTTG+AGG + chr7_1:78323090-78323109 Msa1040840:intron 30.0%
TAGGAATGAAACTAATAGCA+AGG - chr7_1:78323306-78323325 None:intergenic 30.0%
! CTATTAGTTTCATTCCTATC+TGG + chr7_1:78323308-78323327 Msa1040840:intron 30.0%
!!! ATCCCAAAATCGTTAGTTTT+AGG + chr7_1:78323343-78323362 Msa1040840:intron 30.0%
! AGCCTAAAACTAACGATTTT+GGG - chr7_1:78323348-78323367 None:intergenic 30.0%
TAGAACATTATGGCGTAATT+TGG + chr7_1:78323436-78323455 Msa1040840:intron 30.0%
AATCATTATCCAACTAAGTG+GGG - chr7_1:78323475-78323494 None:intergenic 30.0%
CAATCATTATCCAACTAAGT+GGG - chr7_1:78323476-78323495 None:intergenic 30.0%
TTAGTTGGATAATGATTGGT+TGG + chr7_1:78323478-78323497 Msa1040840:intron 30.0%
CTAGTAAATTCTAGCATGTT+TGG - chr7_1:78323599-78323618 None:intergenic 30.0%
CAAACATGCTAGAATTTACT+AGG + chr7_1:78323597-78323616 Msa1040840:intron 30.0%
TAGATCAAAACTAAGCACTA+TGG - chr7_1:78323760-78323779 None:intergenic 30.0%
AGTGATTGTAGTGTCAATTA+AGG + chr7_1:78323787-78323806 Msa1040840:intron 30.0%
! TGCCTATGTATAATTGGTTT+AGG - chr7_1:78323931-78323950 None:intergenic 30.0%
AGAAGATGCCTATGTATAAT+TGG - chr7_1:78323937-78323956 None:intergenic 30.0%
TTATGTTTATGAATGTTGGC+TGG + chr7_1:78323961-78323980 Msa1040840:intron 30.0%
TGAAAGTAATGTCTCCATAA+AGG - chr7_1:78324129-78324148 None:intergenic 30.0%
ATTCTCACATTCATTCATTG+AGG - chr7_1:78324257-78324276 None:intergenic 30.0%
CAATCAGAAAATCAAGGTAT+AGG - chr7_1:78324300-78324319 None:intergenic 30.0%
AGAAAGCAATCAGAAAATCA+AGG - chr7_1:78324306-78324325 None:intergenic 30.0%
! GATTTTCTGATTGCTTTCTA+TGG + chr7_1:78324307-78324326 Msa1040840:intron 30.0%
ATAGAACAAGTAGATGAGAA+TGG - chr7_1:78324528-78324547 None:intergenic 30.0%
TTAGTTATTCCGTTAGTCAA+GGG + chr7_1:78324739-78324758 Msa1040840:exon 30.0%
GACAGGATAAAATTCTAAAC+AGG - chr7_1:78324823-78324842 None:intergenic 30.0%
TGAAACAATACATCTTAGAC+AGG - chr7_1:78324840-78324859 None:intergenic 30.0%
GAAAATGAACAAATGTACCT+AGG + chr7_1:78324869-78324888 Msa1040840:three_prime_UTR 30.0%
!! ACGGTATTTTTGTGGTGAAA+TGG - chr7_1:78321202-78321221 None:intergenic 35.0%
ATACCGTTCTCAATTCTCAA+AGG + chr7_1:78321215-78321234 Msa1040840:five_prime_UTR 35.0%
GTGATATAGATCGGTGAAAT+TGG - chr7_1:78321268-78321287 None:intergenic 35.0%
TTTCCTTCTTCGCAAATAAC+CGG - chr7_1:78321432-78321451 None:intergenic 35.0%
GAAGGAAATGCGTATACTTA+TGG + chr7_1:78321444-78321463 Msa1040840:CDS 35.0%
GAAATGCGTATACTTATGGT+CGG + chr7_1:78321448-78321467 Msa1040840:CDS 35.0%
AAGCTTGAGCTTATAGAGAA+TGG - chr7_1:78321497-78321516 None:intergenic 35.0%
ATTCTCTATAAGCTCAAGCT+TGG + chr7_1:78321496-78321515 Msa1040840:CDS 35.0%
TTTGCTTATAATAGTGGCTG+GGG - chr7_1:78321719-78321738 None:intergenic 35.0%
! TTCCCTTTTCAGATTGTATC+TGG - chr7_1:78321802-78321821 None:intergenic 35.0%
!! ATTTGGTGTAGGGTTTAATG+TGG + chr7_1:78321900-78321919 Msa1040840:intron 35.0%
!! AGAACATTAGCTTTACTGTG+TGG + chr7_1:78321938-78321957 Msa1040840:CDS 35.0%
!! GAACATTAGCTTTACTGTGT+GGG + chr7_1:78321939-78321958 Msa1040840:CDS 35.0%
! ACGATTGGTTGAAATTGGTA+TGG + chr7_1:78322075-78322094 Msa1040840:intron 35.0%
TTGTTCCGTGATATGCTATT+TGG + chr7_1:78322327-78322346 Msa1040840:intron 35.0%
ATGCAAGGGTTATCCAAAAT+AGG - chr7_1:78322647-78322666 None:intergenic 35.0%
AATGTCTGAGAGTAATGCAA+GGG - chr7_1:78322661-78322680 None:intergenic 35.0%
TTGTAGAACTGTCAAGTGTT+AGG + chr7_1:78322730-78322749 Msa1040840:intron 35.0%
TTGTAGAACTGTCAAGTGTT+AGG + chr7_1:78322730-78322749 Msa1040840:intron 35.0%
TCTGTTAGAACTGTAAAGGT+TGG + chr7_1:78323062-78323081 Msa1040840:intron 35.0%
!! TTGGTTGTTGTTGTTGTTTG+AGG + chr7_1:78323158-78323177 Msa1040840:intron 35.0%
TTTCCTATCATCAAGAGACT+TGG + chr7_1:78323271-78323290 Msa1040840:intron 35.0%
TTCCTATCATCAAGAGACTT+GGG + chr7_1:78323272-78323291 Msa1040840:intron 35.0%
! CAGCCTAAAACTAACGATTT+TGG - chr7_1:78323349-78323368 None:intergenic 35.0%
CCAATCATTATCCAACTAAG+TGG - chr7_1:78323477-78323496 None:intergenic 35.0%
CCACTTAGTTGGATAATGAT+TGG + chr7_1:78323474-78323493 Msa1040840:intron 35.0%
GCTAGAATTTACTAGGTAGT+CGG + chr7_1:78323604-78323623 Msa1040840:intron 35.0%
!! GAATTTGAACCAAGAGTGTT+TGG + chr7_1:78323820-78323839 Msa1040840:intron 35.0%
TAAAAACTGCCAAACACTCT+TGG - chr7_1:78323832-78323851 None:intergenic 35.0%
TTTAATGTGCATTGGGTGTA+AGG - chr7_1:78323901-78323920 None:intergenic 35.0%
ATGGTTAGAGGTCAAAAGTA+AGG - chr7_1:78324035-78324054 None:intergenic 35.0%
CTTATTAGATCCGTCCTTTA+TGG + chr7_1:78324112-78324131 Msa1040840:intron 35.0%
AGTAATGTCTCCATAAAGGA+CGG - chr7_1:78324125-78324144 None:intergenic 35.0%
!!! TACACAAGGGCTTATTTTTG+TGG + chr7_1:78324152-78324171 Msa1040840:intron 35.0%
GCTGAAATAACTGATAAGCT+AGG + chr7_1:78324414-78324433 Msa1040840:CDS 35.0%
TCTACTTGTTCTATATGTGC+AGG + chr7_1:78324534-78324553 Msa1040840:intron 35.0%
CTTAGTTATTCCGTTAGTCA+AGG + chr7_1:78324738-78324757 Msa1040840:exon 35.0%
CGATTATGATTTCAGATGCT+CGG + chr7_1:78324787-78324806 Msa1040840:three_prime_UTR 35.0%
AAATAACCGGCTGAATAGCT+TGG - chr7_1:78321419-78321438 None:intergenic 40.0%
CTTGAGCTTATAGAGAATGG+TGG - chr7_1:78321494-78321513 None:intergenic 40.0%
! AAACTTACCAATGGTGGGAA+TGG - chr7_1:78321536-78321555 None:intergenic 40.0%
TCGACATTACCAATGAAGCA+CGG - chr7_1:78321687-78321706 None:intergenic 40.0%
TTGCTTATAATAGTGGCTGG+GGG - chr7_1:78321718-78321737 None:intergenic 40.0%
AGGGTTTAATGTGGAAACTG+TGG + chr7_1:78321909-78321928 Msa1040840:intron 40.0%
TTATGGGTTTCATGCGATAG+AGG + chr7_1:78322113-78322132 Msa1040840:intron 40.0%
GTTGTAGCACTGTTGTATAG+CGG + chr7_1:78322386-78322405 Msa1040840:intron 40.0%
GTTGTAGCACTGTTGTATAG+CGG + chr7_1:78322386-78322405 Msa1040840:intron 40.0%
! AATTTTCTGCGATGCGTGAT+TGG + chr7_1:78322530-78322549 Msa1040840:intron 40.0%
ATTGGTTATTGGGAGTGAGT+TGG - chr7_1:78322600-78322619 None:intergenic 40.0%
ACTCACTCCCAATAACCAAT+AGG + chr7_1:78322600-78322619 Msa1040840:intron 40.0%
! CAAGAGGCCTATTGGTTATT+GGG - chr7_1:78322610-78322629 None:intergenic 40.0%
! TCAAGAGGCCTATTGGTTAT+TGG - chr7_1:78322611-78322630 None:intergenic 40.0%
AAACAAGTCAAGAGGCCTAT+TGG - chr7_1:78322618-78322637 None:intergenic 40.0%
!! CTTGTTTCTTGGGCCTATTT+TGG + chr7_1:78322631-78322650 Msa1040840:intron 40.0%
CAATGTCTGAGAGTAATGCA+AGG - chr7_1:78322662-78322681 None:intergenic 40.0%
TGTGGGGGAAAATTGGAAAA+TGG + chr7_1:78322786-78322805 Msa1040840:CDS 40.0%
TGTGGGGGAAAATTGGAAAA+TGG + chr7_1:78322786-78322805 Msa1040840:CDS 40.0%
! AACCCAAGTCTCTTGATGAT+AGG - chr7_1:78323277-78323296 None:intergenic 40.0%
!!! CGTTAGTTTTAGGCTGTTAC+TGG + chr7_1:78323353-78323372 Msa1040840:intron 40.0%
ATTATCCAACTAAGTGGGGT+CGG - chr7_1:78323471-78323490 None:intergenic 40.0%
CATACTGTATCACAATGGAG+AGG - chr7_1:78323634-78323653 None:intergenic 40.0%
TGGCTCATACTGTATCACAA+TGG - chr7_1:78323639-78323658 None:intergenic 40.0%
AAGTAAGGTGATTTACGCCA+AGG - chr7_1:78324020-78324039 None:intergenic 40.0%
TAGCTTCAACAACACGATCT+CGG - chr7_1:78324191-78324210 None:intergenic 40.0%
! AGATCGTGTTGTTGAAGCTA+GGG + chr7_1:78324191-78324210 Msa1040840:CDS 40.0%
TCAGCAGCATTCATAGCATT+TGG - chr7_1:78324399-78324418 None:intergenic 40.0%
AGATTAAGGAGACGACCAAA+AGG - chr7_1:78324487-78324506 None:intergenic 40.0%
TTCATAAAGTCCTTCACCAG+AGG - chr7_1:78324582-78324601 None:intergenic 40.0%
TCTGGTGAAGGACTTTATGA+AGG + chr7_1:78324581-78324600 Msa1040840:CDS 40.0%
GACTTTATGAAGGACTAGAC+TGG + chr7_1:78324591-78324610 Msa1040840:CDS 40.0%
CTCAAACAACATTGCAAGCA+AGG + chr7_1:78324616-78324635 Msa1040840:CDS 40.0%
TGATTTCAGATGCTCGGATA+TGG + chr7_1:78324793-78324812 Msa1040840:three_prime_UTR 40.0%
ATCAGATCTCTCTTCGTGGT+TGG - chr7_1:78321177-78321196 None:intergenic 45.0%
AGATCGGTGAAATTGGGATG+AGG - chr7_1:78321261-78321280 None:intergenic 45.0%
CATTCACCAAGCTATTCAGC+CGG + chr7_1:78321410-78321429 Msa1040840:CDS 45.0%
AGCTTTACTGTGTGGGATGT+TGG + chr7_1:78321946-78321965 Msa1040840:CDS 45.0%
TTTACTGTGTGGGATGTTGG+TGG + chr7_1:78321949-78321968 Msa1040840:CDS 45.0%
TTTGGTACATCGCTGTGTCT+TGG + chr7_1:78322006-78322025 Msa1040840:intron 45.0%
!! AGGCCTCTTGACTTGTTTCT+TGG + chr7_1:78322620-78322639 Msa1040840:intron 45.0%
!! GGCCTCTTGACTTGTTTCTT+GGG + chr7_1:78322621-78322640 Msa1040840:intron 45.0%
TTTCCCCCACATCACTCTTT+GGG - chr7_1:78322777-78322796 None:intergenic 45.0%
! TTTTCCCCCACATCACTCTT+TGG - chr7_1:78322778-78322797 None:intergenic 45.0%
AGAGTGATGTGGGGGAAAAT+TGG + chr7_1:78322779-78322798 Msa1040840:CDS 45.0%
GGGGGAAAATTGGAAAATGG+AGG + chr7_1:78322789-78322808 Msa1040840:CDS 45.0%
TTTCCCCCACATCACTCTTT+GGG - chr7_1:78322777-78322796 None:intergenic 45.0%
! TTTTCCCCCACATCACTCTT+TGG - chr7_1:78322778-78322797 None:intergenic 45.0%
AGAGTGATGTGGGGGAAAAT+TGG + chr7_1:78322779-78322798 Msa1040840:CDS 45.0%
GGGGGAAAATTGGAAAATGG+AGG + chr7_1:78322789-78322808 Msa1040840:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr7_1:78323140-78323159 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr7_1:78323141-78323160 None:intergenic 45.0%
!! TTTGAGGTGCACTAGCTCTA+GGG + chr7_1:78323174-78323193 Msa1040840:intron 45.0%
GTCTCAGTCTATTGCTAACG+TGG + chr7_1:78323983-78324002 Msa1040840:intron 45.0%
AGTCTATTGCTAACGTGGAC+TGG + chr7_1:78323988-78324007 Msa1040840:intron 45.0%
! GAGATCGTGTTGTTGAAGCT+AGG + chr7_1:78324190-78324209 Msa1040840:CDS 45.0%
AAGCAGGGAAGAGGAGATTA+AGG - chr7_1:78324501-78324520 None:intergenic 45.0%
GATGAGAATGGACAGAAGCA+GGG - chr7_1:78324516-78324535 None:intergenic 45.0%
AGATGAGAATGGACAGAAGC+AGG - chr7_1:78324517-78324536 None:intergenic 45.0%
TTCATGCAGCCCTTGACTAA+CGG - chr7_1:78324751-78324770 None:intergenic 45.0%
GGAGATCAGATCTCTCTTCG+TGG - chr7_1:78321181-78321200 None:intergenic 50.0%
CAGCCGGTTATTTGCGAAGA+AGG + chr7_1:78321426-78321445 Msa1040840:CDS 50.0%
! GAGAATGGTGGTCTTACCAG+CGG - chr7_1:78321482-78321501 None:intergenic 50.0%
! CTTACCAATGGTGGGAATGG+TGG - chr7_1:78321533-78321552 None:intergenic 50.0%
ACATGTCCGACACCTAGACA+CGG + chr7_1:78321645-78321664 Msa1040840:intron 50.0%
! GATTAGCCGTGTCTAGGTGT+CGG - chr7_1:78321654-78321673 None:intergenic 50.0%
ACCTAGACACGGCTAATCCT+AGG + chr7_1:78321656-78321675 Msa1040840:intron 50.0%
!! TCCTAGGATTAGCCGTGTCT+AGG - chr7_1:78321660-78321679 None:intergenic 50.0%
AATGAAGCACGGACACTCCT+AGG - chr7_1:78321676-78321695 None:intergenic 50.0%
!! TAGGAGTGTCCGTGCTTCAT+TGG + chr7_1:78321675-78321694 Msa1040840:intron 50.0%
TGTGTCTTGGCGGCGTAATA+TGG + chr7_1:78322019-78322038 Msa1040840:intron 50.0%
GGCCCAAGAAACAAGTCAAG+AGG - chr7_1:78322626-78322645 None:intergenic 50.0%
TATGGGCCCAAAGAGTGATG+TGG + chr7_1:78322768-78322787 Msa1040840:CDS 50.0%
ATGGGCCCAAAGAGTGATGT+GGG + chr7_1:78322769-78322788 Msa1040840:CDS 50.0%
ATGGAGGAAATTGGGTGACG+TGG + chr7_1:78322805-78322824 Msa1040840:intron 50.0%
TATGGGCCCAAAGAGTGATG+TGG + chr7_1:78322768-78322787 Msa1040840:CDS 50.0%
ATGGGCCCAAAGAGTGATGT+GGG + chr7_1:78322769-78322788 Msa1040840:CDS 50.0%
ATGGAGGAAATTGGGTGACG+TGG + chr7_1:78322805-78322824 Msa1040840:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_1:78323136-78323155 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_1:78323142-78323161 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_1:78323139-78323158 Msa1040840:intron 50.0%
! GTTTGAGGTGCACTAGCTCT+AGG + chr7_1:78323173-78323192 Msa1040840:intron 50.0%
!! GCACTAGCTCTAGGGTTACA+AGG + chr7_1:78323182-78323201 Msa1040840:intron 50.0%
ACTAAGTGGGGTCGGATACA+TGG - chr7_1:78323463-78323482 None:intergenic 50.0%
TGTATCCGACCCCACTTAGT+TGG + chr7_1:78323463-78323482 Msa1040840:intron 50.0%
!! ACGTGGACTGGCTTAAACCT+TGG + chr7_1:78324000-78324019 Msa1040840:intron 50.0%
GCTGCACAGGATGTTAAACG+AGG + chr7_1:78324218-78324237 Msa1040840:CDS 50.0%
ATTCACTTCGTCAGCGTCAC+TGG + chr7_1:78324442-78324461 Msa1040840:CDS 50.0%
AATGGACAGAAGCAGGGAAG+AGG - chr7_1:78324510-78324529 None:intergenic 50.0%
ACATGTGCTACCTCTGGTGA+AGG + chr7_1:78324569-78324588 Msa1040840:CDS 50.0%
GTCACCACCATTCCCACCAT+TGG + chr7_1:78321526-78321545 Msa1040840:CDS 55.0%
TGTCGGACATGTGTCGTGTC+CGG - chr7_1:78321637-78321656 None:intergenic 55.0%
GGTACATCGCTGTGTCTTGG+CGG + chr7_1:78322009-78322028 Msa1040840:intron 55.0%
TGGGCCCAAAGAGTGATGTG+GGG + chr7_1:78322770-78322789 Msa1040840:CDS 55.0%
TGGGCCCAAAGAGTGATGTG+GGG + chr7_1:78322770-78322789 Msa1040840:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr7_1:78323128-78323147 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr7_1:78323127-78323146 Msa1040840:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr7_1:78323128-78323147 Msa1040840:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr7_1:78323134-78323153 Msa1040840:intron 55.0%
CAGAGGTAGCACATGTGCTC+TGG - chr7_1:78324565-78324584 None:intergenic 55.0%
CAGAGCACATGTGCTACCTC+TGG + chr7_1:78324563-78324582 Msa1040840:CDS 55.0%
!! TGTGTGGGATGTTGGTGGCC+AGG + chr7_1:78321954-78321973 Msa1040840:CDS 60.0%
!! GGATGTTGGTGGCCAGGACA+AGG + chr7_1:78321960-78321979 Msa1040840:CDS 60.0%
GGGCCCAAAGAGTGATGTGG+GGG + chr7_1:78322771-78322790 Msa1040840:CDS 60.0%
GGGCCCAAAGAGTGATGTGG+GGG + chr7_1:78322771-78322790 Msa1040840:CDS 60.0%
AAGCTAGGGACGAGCTGCAC+AGG + chr7_1:78324205-78324224 Msa1040840:CDS 60.0%
ATGGTCGGTCTCGATGCCGC+TGG + chr7_1:78321463-78321482 Msa1040840:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 78321057 78325065 78321057 ID=Msa1040840;Name=Msa1040840
chr7_1 mRNA 78321057 78325065 78321057 ID=Msa1040840-mRNA-1;Parent=Msa1040840;Name=Msa1040840-mRNA-1;_AED=0.13;_eAED=0.13;_QI=317|0.71|0.75|0.87|0.85|0.75|8|323|188
chr7_1 exon 78321057 78321324 78321057 ID=Msa1040840-mRNA-1:exon:20889;Parent=Msa1040840-mRNA-1
chr7_1 exon 78321351 78321547 78321351 ID=Msa1040840-mRNA-1:exon:20890;Parent=Msa1040840-mRNA-1
chr7_1 exon 78321911 78321981 78321911 ID=Msa1040840-mRNA-1:exon:20891;Parent=Msa1040840-mRNA-1
chr7_1 exon 78322736 78322818 78322736 ID=Msa1040840-mRNA-1:exon:20892;Parent=Msa1040840-mRNA-1
chr7_1 exon 78324182 78324239 78324182 ID=Msa1040840-mRNA-1:exon:20893;Parent=Msa1040840-mRNA-1
chr7_1 exon 78324345 78324463 78324345 ID=Msa1040840-mRNA-1:exon:20894;Parent=Msa1040840-mRNA-1
chr7_1 exon 78324556 78324637 78324556 ID=Msa1040840-mRNA-1:exon:20895;Parent=Msa1040840-mRNA-1
chr7_1 exon 78324737 78325065 78324737 ID=Msa1040840-mRNA-1:exon:20896;Parent=Msa1040840-mRNA-1
chr7_1 five_prime_UTR 78321057 78321324 78321057 ID=Msa1040840-mRNA-1:five_prime_utr;Parent=Msa1040840-mRNA-1
chr7_1 five_prime_UTR 78321351 78321399 78321351 ID=Msa1040840-mRNA-1:five_prime_utr;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78321400 78321547 78321400 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78321911 78321981 78321911 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78322736 78322818 78322736 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78324182 78324239 78324182 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78324345 78324463 78324345 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78324556 78324637 78324556 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 CDS 78324737 78324742 78324737 ID=Msa1040840-mRNA-1:cds;Parent=Msa1040840-mRNA-1
chr7_1 three_prime_UTR 78324743 78325065 78324743 ID=Msa1040840-mRNA-1:three_prime_utr;Parent=Msa1040840-mRNA-1
Gene Sequence

>Msa1040840

ATGGGTCTATCATTCACCAAGCTATTCAGCCGGTTATTTGCGAAGAAGGAAATGCGTATACTTATGGTCGGTCTCGATGCCGCTGGTAAGACCACCATTCTCTATAAGCTCAAGCTTGGAGAAATTGTCACCACCATTCCCACCATTGGGTTTAATGTGGAAACTGTGGAATACAAGAACATTAGCTTTACTGTGTGGGATGTTGGTGGCCAGGACAAGAACTGTCAAGTGTTAGGATTCAAATTGAGAAGTATGGGCCCAAAGAGTGATGTGGGGGAAAATTGGAAAATGGAGGAAATTGGCAATGACCGAGATCGTGTTGTTGAAGCTAGGGACGAGCTGCACAGGATGTTAAACGAGGATGAGTTGAGAGATGCTGTGCTTCTTGTTTTTGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAACTGATAAGCTAGGTCTTCATTCACTTCGTCAGCGTCACTGGTATATCCAGAGCACATGTGCTACCTCTGGTGAAGGACTTTATGAAGGACTAGACTGGCTCTCAAACAACATTGCAAGCAAGGCTTAG

Protein sequence

>Msa1040840

MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKNCQVLGFKLRSMGPKSDVGENWKMEEIGNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA*