Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316910 | XP_003594195.1 | 98.113 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 9.99e-72 | 218 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316910 | sp|O49636|MPC4_ARATH | 86.000 | 100 | 14 | 0 | 1 | 100 | 1 | 100 | 2.20e-63 | 190 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0018240 | Msa0316910 | 0.800859 | 1.182690e-48 | -8.615850e-47 |
Msa0018620 | Msa0316910 | 0.815088 | 1.105650e-51 | -8.615850e-47 |
Msa0022550 | Msa0316910 | 0.810055 | 1.394006e-50 | -8.615850e-47 |
Msa0026910 | Msa0316910 | 0.821857 | 3.231052e-53 | -8.615850e-47 |
Msa0029310 | Msa0316910 | 0.814592 | 1.424517e-51 | -8.615850e-47 |
Msa0032090 | Msa0316910 | 0.807463 | 4.992523e-50 | -8.615850e-47 |
Msa0032920 | Msa0316910 | -0.827893 | 1.216519e-54 | -8.615850e-47 |
Msa0035130 | Msa0316910 | 0.812984 | 3.219146e-51 | -8.615850e-47 |
Msa0040690 | Msa0316910 | 0.822586 | 2.188585e-53 | -8.615850e-47 |
Msa0045790 | Msa0316910 | 0.818368 | 2.033110e-52 | -8.615850e-47 |
Msa0046160 | Msa0316910 | 0.820135 | 8.048694e-53 | -8.615850e-47 |
Msa0051740 | Msa0316910 | 0.800408 | 1.461585e-48 | -8.615850e-47 |
Msa0076000 | Msa0316910 | 0.807630 | 4.601803e-50 | -8.615850e-47 |
Msa0079380 | Msa0316910 | 0.806682 | 7.306900e-50 | -8.615850e-47 |
Msa0084380 | Msa0316910 | 0.804988 | 1.658014e-49 | -8.615850e-47 |
Msa0090520 | Msa0316910 | 0.800135 | 1.660999e-48 | -8.615850e-47 |
Msa0103250 | Msa0316910 | 0.819368 | 1.205134e-52 | -8.615850e-47 |
Msa0137990 | Msa0316910 | 0.802403 | 5.704570e-49 | -8.615850e-47 |
Msa0138020 | Msa0316910 | 0.810293 | 1.238819e-50 | -8.615850e-47 |
Msa0149000 | Msa0316910 | 0.805188 | 1.506185e-49 | -8.615850e-47 |
Msa0167820 | Msa0316910 | 0.820395 | 7.016494e-53 | -8.615850e-47 |
Msa0173890 | Msa0316910 | 0.804159 | 2.469363e-49 | -8.615850e-47 |
Msa0181230 | Msa0316910 | 0.804514 | 2.082324e-49 | -8.615850e-47 |
Msa0186890 | Msa0316910 | 0.818867 | 1.566657e-52 | -8.615850e-47 |
Msa0197510 | Msa0316910 | 0.821675 | 3.559964e-53 | -8.615850e-47 |
Msa0197520 | Msa0316910 | 0.908834 | 1.108157e-81 | -8.615850e-47 |
Msa0211150 | Msa0316910 | 0.823417 | 1.400658e-53 | -8.615850e-47 |
Msa0223690 | Msa0316910 | 0.802358 | 5.826703e-49 | -8.615850e-47 |
Msa0254790 | Msa0316910 | 0.808095 | 3.664878e-50 | -8.615850e-47 |
Msa0260680 | Msa0316910 | 0.803284 | 3.751578e-49 | -8.615850e-47 |
Msa0267780 | Msa0316910 | 0.801755 | 7.752063e-49 | -8.615850e-47 |
Msa0270170 | Msa0316910 | -0.804329 | 2.276407e-49 | -8.615850e-47 |
Msa0278790 | Msa0316910 | 0.819964 | 8.807843e-53 | -8.615850e-47 |
Msa0280090 | Msa0316910 | 0.817478 | 3.229065e-52 | -8.615850e-47 |
Msa0316800 | Msa0316910 | 0.806335 | 8.648432e-50 | -8.615850e-47 |
Msa0316900 | Msa0316910 | 0.807273 | 5.477602e-50 | -8.615850e-47 |
Msa0316910 | Msa0317730 | 0.814339 | 1.620308e-51 | -8.615850e-47 |
Msa0316910 | Msa0317970 | 0.813798 | 2.132814e-51 | -8.615850e-47 |
Msa0316910 | Msa0341690 | 0.816455 | 5.482264e-52 | -8.615850e-47 |
Msa0316910 | Msa0358890 | 0.818582 | 1.818454e-52 | -8.615850e-47 |
Msa0316910 | Msa0366240 | 0.803201 | 3.903998e-49 | -8.615850e-47 |
Msa0316910 | Msa0386920 | 0.822157 | 2.752640e-53 | -8.615850e-47 |
Msa0316910 | Msa0435220 | 0.815680 | 8.167516e-52 | -8.615850e-47 |
Msa0316910 | Msa0468320 | 0.806647 | 7.432324e-50 | -8.615850e-47 |
Msa0316910 | Msa0479170 | 0.826865 | 2.144903e-54 | -8.615850e-47 |
Msa0316910 | Msa0518440 | 0.804866 | 1.758658e-49 | -8.615850e-47 |
Msa0316910 | Msa0527020 | 0.817408 | 3.349987e-52 | -8.615850e-47 |
Msa0316910 | Msa0532980 | 0.822452 | 2.351475e-53 | -8.615850e-47 |
Msa0316910 | Msa0541860 | 0.818183 | 2.238280e-52 | -8.615850e-47 |
Msa0316910 | Msa0557070 | 0.806644 | 7.443709e-50 | -8.615850e-47 |
Msa0316910 | Msa0596800 | 0.800321 | 1.522818e-48 | -8.615850e-47 |
Msa0316910 | Msa0610840 | -0.803050 | 4.194598e-49 | -8.615850e-47 |
Msa0316910 | Msa0615440 | 0.836054 | 1.171639e-56 | -8.615850e-47 |
Msa0316910 | Msa0641670 | 0.824662 | 7.150385e-54 | -8.615850e-47 |
Msa0316910 | Msa0667790 | 0.821888 | 3.177277e-53 | -8.615850e-47 |
Msa0316910 | Msa0677410 | 0.816185 | 6.300691e-52 | -8.615850e-47 |
Msa0316910 | Msa0698490 | 0.834072 | 3.702345e-56 | -8.615850e-47 |
Msa0316910 | Msa0698660 | 0.835573 | 1.550794e-56 | -8.615850e-47 |
Msa0316910 | Msa0703230 | 0.817833 | 2.685715e-52 | -8.615850e-47 |
Msa0316910 | Msa0710270 | 0.809051 | 2.290329e-50 | -8.615850e-47 |
Msa0316910 | Msa0750880 | 0.808590 | 2.873939e-50 | -8.615850e-47 |
Msa0316910 | Msa0750920 | 0.803374 | 3.593915e-49 | -8.615850e-47 |
Msa0316910 | Msa0784480 | 0.812586 | 3.934328e-51 | -8.615850e-47 |
Msa0316910 | Msa0797930 | 0.821978 | 3.028314e-53 | -8.615850e-47 |
Msa0316910 | Msa0808270 | 0.826097 | 3.269671e-54 | -8.615850e-47 |
Msa0316910 | Msa0818060 | 0.816147 | 6.423072e-52 | -8.615850e-47 |
Msa0316910 | Msa0825340 | 0.808639 | 2.805039e-50 | -8.615850e-47 |
Msa0316910 | Msa0835960 | 0.806692 | 7.270269e-50 | -8.615850e-47 |
Msa0316910 | Msa0865030 | 0.828340 | 9.491464e-55 | -8.615850e-47 |
Msa0316910 | Msa0880950 | 0.801953 | 7.057978e-49 | -8.615850e-47 |
Msa0316910 | Msa0902760 | 0.806545 | 7.808837e-50 | -8.615850e-47 |
Msa0316910 | Msa0906690 | 0.815069 | 1.116705e-51 | -8.615850e-47 |
Msa0316910 | Msa0936390 | 0.812679 | 3.755172e-51 | -8.615850e-47 |
Msa0316910 | Msa0969520 | 0.826931 | 2.068730e-54 | -8.615850e-47 |
Msa0316910 | Msa0969810 | 0.806871 | 6.665620e-50 | -8.615850e-47 |
Msa0316910 | Msa0980880 | 0.820321 | 7.298074e-53 | -8.615850e-47 |
Msa0316910 | Msa1006840 | 0.806549 | 7.795785e-50 | -8.615850e-47 |
Msa0316910 | Msa1013400 | 0.805610 | 1.228494e-49 | -8.615850e-47 |
Msa0316910 | Msa1024740 | 0.805360 | 1.386149e-49 | -8.615850e-47 |
Msa0316910 | Msa1025260 | 0.806021 | 1.007029e-49 | -8.615850e-47 |
Msa0316910 | Msa1048160 | 0.803321 | 3.686845e-49 | -8.615850e-47 |
Msa0316910 | Msa1073490 | 0.808694 | 2.730585e-50 | -8.615850e-47 |
Msa0316910 | Msa1079230 | 0.806286 | 8.857728e-50 | -8.615850e-47 |
Msa0316910 | Msa1080640 | 0.815545 | 8.751934e-52 | -8.615850e-47 |
Msa0316910 | Msa1089450 | 0.801532 | 8.615329e-49 | -8.615850e-47 |
Msa0316910 | Msa1093530 | 0.805267 | 1.449860e-49 | -8.615850e-47 |
Msa0316910 | Msa1104140 | 0.801969 | 7.005598e-49 | -8.615850e-47 |
Msa0316910 | Msa1109350 | 0.805679 | 1.188236e-49 | -8.615850e-47 |
Msa0316910 | Msa1109680 | 0.806968 | 6.356334e-50 | -8.615850e-47 |
Msa0316910 | Msa1119090 | 0.807101 | 5.958485e-50 | -8.615850e-47 |
Msa0316910 | Msa1124110 | 0.817453 | 3.272649e-52 | -8.615850e-47 |
Msa0316910 | Msa1127890 | 0.802079 | 6.650328e-49 | -8.615850e-47 |
Msa0316910 | Msa1135470 | 0.825399 | 4.788582e-54 | -8.615850e-47 |
Msa0316910 | Msa1145810 | 0.809897 | 1.507357e-50 | -8.615850e-47 |
Msa0316910 | Msa1147900 | 0.810687 | 1.018597e-50 | -8.615850e-47 |
Msa0316910 | Msa1152990 | 0.831204 | 1.905821e-55 | -8.615850e-47 |
Msa0316910 | Msa1162780 | 0.804282 | 2.328557e-49 | -8.615850e-47 |
Msa0316910 | Msa1168950 | 0.814897 | 1.219385e-51 | -8.615850e-47 |
Msa0316910 | Msa1169040 | 0.817578 | 3.067161e-52 | -8.615850e-47 |
Msa0316910 | Msa1199570 | 0.814295 | 1.657061e-51 | -8.615850e-47 |
Msa0316910 | Msa1207310 | 0.811663 | 6.256713e-51 | -8.615850e-47 |
Msa0316910 | Msa1219000 | 0.831551 | 1.565246e-55 | -8.615850e-47 |
Msa0316910 | Msa1222840 | -0.808317 | 3.285949e-50 | -8.615850e-47 |
Msa0316910 | Msa1243740 | -0.808794 | 2.600245e-50 | -8.615850e-47 |
Msa0316910 | Msa1274060 | 0.807926 | 3.980553e-50 | -8.615850e-47 |
Msa0316910 | Msa1275590 | 0.807604 | 4.661396e-50 | -8.615850e-47 |
Msa0316910 | Msa1292830 | 0.810731 | 9.964619e-51 | -8.615850e-47 |
Msa0316910 | Msa1294820 | 0.822616 | 2.153704e-53 | -8.615850e-47 |
Msa0316910 | Msa1306560 | 0.807113 | 5.923834e-50 | -8.615850e-47 |
Msa0316910 | Msa1311960 | 0.804324 | 2.281630e-49 | -8.615850e-47 |
Msa0316910 | Msa1320410 | 0.804750 | 1.859189e-49 | -8.615850e-47 |
Msa0316910 | Msa1328710 | 0.821065 | 4.921704e-53 | -8.615850e-47 |
Msa0316910 | Msa1331320 | 0.807682 | 4.486228e-50 | -8.615850e-47 |
Msa0316910 | Msa1332760 | 0.832950 | 7.056134e-56 | -8.615850e-47 |
Msa0316910 | Msa1336710 | 0.803107 | 4.081258e-49 | -8.615850e-47 |
Msa0316910 | Msa1346370 | 0.807635 | 4.590857e-50 | -8.615850e-47 |
Msa0316910 | Msa1353060 | 0.807874 | 4.083759e-50 | -8.615850e-47 |
Msa0316910 | Msa1353470 | 0.806253 | 9.000525e-50 | -8.615850e-47 |
Msa0316910 | Msa1353980 | 0.801784 | 7.646651e-49 | -8.615850e-47 |
Msa0316910 | Msa1360980 | 0.827281 | 1.705949e-54 | -8.615850e-47 |
Msa0316910 | Msa1365600 | 0.804715 | 1.891362e-49 | -8.615850e-47 |
Msa0316910 | Msa1368430 | 0.831595 | 1.526981e-55 | -8.615850e-47 |
Msa0316910 | Msa1369150 | 0.800579 | 1.349113e-48 | -8.615850e-47 |
Msa0316910 | Msa1375380 | 0.804727 | 1.879831e-49 | -8.615850e-47 |
Msa0316910 | Msa1375560 | 0.830212 | 3.334679e-55 | -8.615850e-47 |
Msa0316910 | Msa1375840 | 0.809411 | 1.917298e-50 | -8.615850e-47 |
Msa0316910 | Msa1380400 | 0.802762 | 4.810041e-49 | -8.615850e-47 |
Msa0316910 | Msa1382790 | 0.804530 | 2.066563e-49 | -8.615850e-47 |
Msa0316910 | Msa1383230 | 0.829007 | 6.548393e-55 | -8.615850e-47 |
Msa0316910 | Msa1389880 | 0.806249 | 9.016691e-50 | -8.615850e-47 |
Msa0316910 | Msa1394380 | 0.808456 | 3.070270e-50 | -8.615850e-47 |
Msa0316910 | Msa1407190 | 0.810387 | 1.182243e-50 | -8.615850e-47 |
Msa0316910 | Msa1408010 | 0.809444 | 1.886666e-50 | -8.615850e-47 |
Msa0316910 | Msa1423350 | 0.801065 | 1.073586e-48 | -8.615850e-47 |
Msa0316910 | Msa1424750 | 0.813393 | 2.618375e-51 | -8.615850e-47 |
Msa0316910 | Msa1432130 | 0.810658 | 1.033081e-50 | -8.615850e-47 |
Msa0316910 | Msa1436480 | 0.827651 | 1.390427e-54 | -8.615850e-47 |
Msa0316910 | Msa1447180 | 0.818678 | 1.729481e-52 | -8.615850e-47 |
Msa0316910 | Msa1454570 | 0.802006 | 6.885551e-49 | -8.615850e-47 |
Msa0316910 | Msa1464810 | 0.805924 | 1.055448e-49 | -8.615850e-47 |
Msa0316910 | Msa1465680 | 0.814835 | 1.258125e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316910 | MtrunA17_Chr2g0289651 | 98.113 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 9.19e-76 | 218 |
Msa0316910 | MtrunA17_Chr2g0289641 | 68.868 | 106 | 33 | 0 | 1 | 106 | 1 | 106 | 8.17e-55 | 166 |
Msa0316910 | MtrunA17_Chr1g0210881 | 36.634 | 101 | 64 | 0 | 6 | 106 | 4 | 104 | 1.47e-18 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316910 | AT4G22310.1 | 86.000 | 100 | 14 | 0 | 1 | 100 | 1 | 100 | 2.23e-64 | 190 |
Msa0316910 | AT4G14695.3 | 77.778 | 108 | 22 | 1 | 1 | 106 | 1 | 108 | 1.97e-60 | 180 |
Msa0316910 | AT4G14695.1 | 77.778 | 108 | 22 | 1 | 1 | 106 | 1 | 108 | 1.97e-60 | 180 |
Msa0316910 | AT4G05590.1 | 80.000 | 100 | 20 | 0 | 1 | 100 | 1 | 100 | 5.84e-60 | 179 |
Msa0316910 | AT4G05590.2 | 57.971 | 138 | 20 | 1 | 1 | 100 | 1 | 138 | 9.31e-53 | 162 |
Msa0316910 | AT4G05590.3 | 88.406 | 69 | 8 | 0 | 1 | 69 | 1 | 69 | 1.50e-42 | 134 |
Msa0316910 | AT4G14695.2 | 61.111 | 108 | 22 | 2 | 1 | 106 | 1 | 90 | 4.74e-41 | 130 |
Msa0316910 | AT5G20090.2 | 41.121 | 107 | 62 | 1 | 1 | 106 | 1 | 107 | 2.76e-22 | 84.3 |
Msa0316910 | AT5G20090.1 | 41.121 | 107 | 62 | 1 | 1 | 106 | 1 | 107 | 2.76e-22 | 84.3 |
Msa0316910 | AT5G20090.4 | 41.121 | 107 | 62 | 1 | 1 | 106 | 1 | 107 | 2.76e-22 | 84.3 |
Msa0316910 | AT5G20090.3 | 41.489 | 94 | 55 | 0 | 1 | 94 | 1 | 94 | 6.38e-21 | 80.5 |
Find 37 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCAAAGCTTCAAGCTTTC+TGG | 0.044366 | 2_4:-14206291 | Msa0316910:CDS |
TGTTAAATAAATAAATAAAA+AGG | 0.191542 | 2_4:+14203065 | None:intergenic |
ATATATTTGAAATTTCATTT+TGG | 0.208618 | 2_4:-14203136 | Msa0316910:three_prime_UTR |
TCGAAGTAACTCACTGGTTT+TGG | 0.211024 | 2_4:+14206252 | None:intergenic |
GATTGAAAGCGAATTCGATT+TGG | 0.315077 | 2_4:+14206355 | None:intergenic |
TATCAAGTTATTTGTGTACT+TGG | 0.339842 | 2_4:-14203194 | Msa0316910:three_prime_UTR |
CTTTCCTATCCTCAACAAAT+AGG | 0.357519 | 2_4:-14204735 | Msa0316910:intron |
TTGCAACGTTCACAGCAAAA+AGG | 0.357937 | 2_4:+14203719 | None:intergenic |
AAGAAGAACGATTAAATTCA+TGG | 0.368955 | 2_4:-14206317 | Msa0316910:exon |
ATTGAAAGCGAATTCGATTT+GGG | 0.381444 | 2_4:+14206356 | None:intergenic |
TGAGGATAGGAAAGCTTCTC+TGG | 0.382144 | 2_4:+14204744 | None:intergenic |
ATTTGCGTGACAGTTGGTAT+AGG | 0.405723 | 2_4:+14203683 | None:intergenic |
GACACAGCTGTTACAGCTAC+TGG | 0.418439 | 2_4:-14204502 | Msa0316910:intron |
TTACAGCTACTGGACTTATC+TGG | 0.420347 | 2_4:-14204492 | Msa0316910:CDS |
CAAAAGCACAGGTCTTAACT+TGG | 0.425631 | 2_4:+14202999 | None:intergenic |
CAACATGAAAATTGCAATCC+AGG | 0.446735 | 2_4:+14203162 | None:intergenic |
AACGTTGCAATGGCAGGAAC+TGG | 0.478710 | 2_4:-14203706 | Msa0316910:CDS |
TGTACTTGGAGCTCGATACC+TGG | 0.488738 | 2_4:-14203180 | Msa0316910:three_prime_UTR |
CTGATACCCCACTTAAATGT+AGG | 0.491087 | 2_4:+14204798 | None:intergenic |
TTTGGGCACCTACATTTAAG+TGG | 0.501597 | 2_4:-14204806 | Msa0316910:CDS |
CATACCTATTTGTTGAGGAT+AGG | 0.535886 | 2_4:+14204731 | None:intergenic |
AGGGGATGAATTACGGCAGA+TGG | 0.539765 | 2_4:+14203085 | None:intergenic |
TTGGGCACCTACATTTAAGT+GGG | 0.548150 | 2_4:-14204805 | Msa0316910:CDS |
GCTGTGAACGTTGCAATGGC+AGG | 0.549298 | 2_4:-14203712 | Msa0316910:CDS |
TGACATTCCTTCAAAAGCAC+AGG | 0.561077 | 2_4:+14202988 | None:intergenic |
GCTTTCTGGAATCATCCAGC+TGG | 0.566796 | 2_4:-14206277 | Msa0316910:CDS |
ATAATATAGTTTGCAAGTGG+TGG | 0.572798 | 2_4:-14206387 | Msa0316910:five_prime_UTR |
ACCGCAATTTGCGTGACAGT+TGG | 0.573648 | 2_4:+14203677 | None:intergenic |
ACCAACTGTCACGCAAATTG+CGG | 0.595594 | 2_4:-14203678 | Msa0316910:intron |
ATGCGCATACCTATTTGTTG+AGG | 0.604492 | 2_4:+14204726 | None:intergenic |
GCAAGATTATTCGTCAGAGA+AGG | 0.608255 | 2_4:-14203252 | Msa0316910:CDS |
TGCAAAGAAGACTTACAACA+AGG | 0.615838 | 2_4:+14203029 | None:intergenic |
CAAATAATATAGTTTGCAAG+TGG | 0.621929 | 2_4:-14206390 | Msa0316910:five_prime_UTR |
GGATGAATTACGGCAGATGG+AGG | 0.622804 | 2_4:+14203088 | None:intergenic |
GGATAGGAAAGCTTCTCTGG+TGG | 0.644326 | 2_4:+14204747 | None:intergenic |
GCAAAGAAGACTTACAACAA+GGG | 0.649985 | 2_4:+14203030 | None:intergenic |
TGGGCACCTACATTTAAGTG+GGG | 0.659300 | 2_4:-14204804 | Msa0316910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATATTTGAAATTTCATTT+TGG | - | chr2_4:14206263-14206282 | Msa0316910:intron | 10.0% |
!!! | TATATTTGAAATTTCATTTT+GGG | - | chr2_4:14206264-14206283 | Msa0316910:intron | 10.0% |
!! | AAAAGTCAAATTAAGTTAAT+CGG | + | chr2_4:14203328-14203347 | None:intergenic | 15.0% |
!!! | TAACTTTGTATATATGATTT+TGG | + | chr2_4:14204072-14204091 | None:intergenic | 15.0% |
!! | AAATCATATATACAAAGTTA+TGG | - | chr2_4:14203671-14203690 | Msa0316910:intron | 15.0% |
!!! | TAACTTTGTATATATGATTT+TGG | - | chr2_4:14204072-14204091 | Msa0316910:intron | 15.0% |
!!! | TTTTTAAGGTTTTTATTTCT+TGG | + | chr2_4:14205371-14205390 | None:intergenic | 15.0% |
!! | TTAAGATACATATATAAGTA+TGG | + | chr2_4:14206108-14206127 | None:intergenic | 15.0% |
!! | TTCATAAATAAAAACACGAA+TGG | + | chr2_4:14203192-14203211 | None:intergenic | 20.0% |
!! | TTTGATTGCTTTGTAAAAAT+TGG | - | chr2_4:14203345-14203364 | Msa0316910:intron | 20.0% |
!! | TTGATTGCTTTGTAAAAATT+GGG | - | chr2_4:14203346-14203365 | Msa0316910:intron | 20.0% |
!!! | TAAAAATTGGGTCATTTTTA+GGG | - | chr2_4:14203358-14203377 | Msa0316910:intron | 20.0% |
!! | ACTTATTATTATCAAAGATC+TGG | - | chr2_4:14203459-14203478 | Msa0316910:intron | 20.0% |
!! | GATAAAAGTGGTTAAATATA+GGG | + | chr2_4:14204149-14204168 | None:intergenic | 20.0% |
!! | TGATAAAAGTGGTTAAATAT+AGG | + | chr2_4:14204150-14204169 | None:intergenic | 20.0% |
!! | AAGGATTTAATTGATAAAAG+TGG | + | chr2_4:14204161-14204180 | None:intergenic | 20.0% |
!! | CCAAATTCAATAGAAATATT+AGG | + | chr2_4:14204246-14204265 | None:intergenic | 20.0% |
!!! | CCTAATATTTCTATTGAATT+TGG | - | chr2_4:14204243-14204262 | Msa0316910:intron | 20.0% |
!!! | AGAAATACACATTTTCAAAA+GGG | + | chr2_4:14204738-14204757 | None:intergenic | 20.0% |
!! | TAGTATATATTCTCATGTAT+TGG | - | chr2_4:14204833-14204852 | Msa0316910:intron | 20.0% |
!! | AGTATATATTCTCATGTATT+GGG | - | chr2_4:14204834-14204853 | Msa0316910:intron | 20.0% |
!!! | AAGTTTTGTTGTTTTTTCAA+AGG | - | chr2_4:14204959-14204978 | Msa0316910:intron | 20.0% |
!! | ATATTTCATGAACAAGTTAA+AGG | + | chr2_4:14204992-14205011 | None:intergenic | 20.0% |
!! | ATGAAATATAGAAATACTAG+TGG | - | chr2_4:14205003-14205022 | Msa0316910:intron | 20.0% |
!! | ACAATTAACTAAATGAACTT+TGG | - | chr2_4:14205479-14205498 | Msa0316910:intron | 20.0% |
!!! | ATCTAGTTTATTTTCTTTAG+TGG | - | chr2_4:14205898-14205917 | Msa0316910:intron | 20.0% |
!!! | TCTAGTTTATTTTCTTTAGT+GGG | - | chr2_4:14205899-14205918 | Msa0316910:intron | 20.0% |
!! | AAGGTTAAACTACAAAATAA+AGG | + | chr2_4:14206021-14206040 | None:intergenic | 20.0% |
!! | CAAATAATATAGTTTGCAAG+TGG | - | chr2_4:14203009-14203028 | Msa0316910:three_prime_UTR | 25.0% |
! | AAGAAGAACGATTAAATTCA+TGG | - | chr2_4:14203082-14203101 | Msa0316910:three_prime_UTR | 25.0% |
!!! | TCGTTGTTTTTCATTTGATA+AGG | - | chr2_4:14203213-14203232 | Msa0316910:three_prime_UTR | 25.0% |
! | CAAATCCAATAACTGTTATA+CGG | + | chr2_4:14203244-14203263 | None:intergenic | 25.0% |
!!! | GTAAAAATTGGGTCATTTTT+AGG | - | chr2_4:14203357-14203376 | Msa0316910:intron | 25.0% |
! | GAATTATAGAACGAAATTGT+TGG | - | chr2_4:14203481-14203500 | Msa0316910:intron | 25.0% |
! | AAAGTAGAGGACTAATTTAT+TGG | + | chr2_4:14203571-14203590 | None:intergenic | 25.0% |
!! | TATATACTGACTATCCAATT+AGG | - | chr2_4:14203891-14203910 | Msa0316910:intron | 25.0% |
! | GGTGAAAAATGTAATCTATT+TGG | + | chr2_4:14204453-14204472 | None:intergenic | 25.0% |
!! | CAGAAATACACATTTTCAAA+AGG | + | chr2_4:14204739-14204758 | None:intergenic | 25.0% |
!! | GTATTTCTGAATTCTTTGAA+AGG | - | chr2_4:14204750-14204769 | Msa0316910:CDS | 25.0% |
! | ATTCCATAATTCATTCACTT+GGG | + | chr2_4:14204786-14204805 | None:intergenic | 25.0% |
! | GAAAAAACAACAAAACTTAC+TGG | + | chr2_4:14204957-14204976 | None:intergenic | 25.0% |
! | TAACTAAGCAACAAAAAAAC+AGG | + | chr2_4:14205245-14205264 | None:intergenic | 25.0% |
! | TTACTATGTTGCAGAAAAAT+TGG | - | chr2_4:14205655-14205674 | Msa0316910:intron | 25.0% |
! | TTGAATCATAATGTAGCAAA+TGG | + | chr2_4:14205791-14205810 | None:intergenic | 25.0% |
!!! | TTGTTGATGATATGTTAGTT+TGG | - | chr2_4:14205832-14205851 | Msa0316910:intron | 25.0% |
!!! | TGTTTGAGTTTCCAATTTTT+GGG | + | chr2_4:14205869-14205888 | None:intergenic | 25.0% |
! | CTATAGAAAAAGAATGATGA+CGG | - | chr2_4:14206170-14206189 | Msa0316910:intron | 25.0% |
! | TATCAAGTTATTTGTGTACT+TGG | - | chr2_4:14206205-14206224 | Msa0316910:intron | 25.0% |
! | AATAAAAAGGGGATGAATTA+CGG | + | chr2_4:14206324-14206343 | None:intergenic | 25.0% |
! | ATAATATAGTTTGCAAGTGG+TGG | - | chr2_4:14203012-14203031 | Msa0316910:three_prime_UTR | 30.0% |
ATTGAAAGCGAATTCGATTT+GGG | + | chr2_4:14203046-14203065 | None:intergenic | 30.0% | |
TACTTCCGTATAACAGTTAT+TGG | - | chr2_4:14203236-14203255 | Msa0316910:CDS | 30.0% | |
CGTATAACAGTTATTGGATT+TGG | - | chr2_4:14203242-14203261 | Msa0316910:CDS | 30.0% | |
! | TTTTGATGCTTCATGAAACT+TGG | - | chr2_4:14203436-14203455 | Msa0316910:intron | 30.0% |
AAATTAGTCCTCTACTTTGT+AGG | - | chr2_4:14203573-14203592 | Msa0316910:intron | 30.0% | |
TTTCAAAATGCTTCTGATGT+TGG | - | chr2_4:14203627-14203646 | Msa0316910:intron | 30.0% | |
CATGAAAGACAAACAAACTA+GGG | - | chr2_4:14203755-14203774 | Msa0316910:intron | 30.0% | |
! | ATCGTATAAAGCATCAAGAA+GGG | + | chr2_4:14203797-14203816 | None:intergenic | 30.0% |
! | AATCGTATAAAGCATCAAGA+AGG | + | chr2_4:14203798-14203817 | None:intergenic | 30.0% |
! | TGTATATTGACTATCCCATT+AGG | + | chr2_4:14203845-14203864 | None:intergenic | 30.0% |
ATATAAACTTCTCTCTCTAC+TGG | + | chr2_4:14203874-14203893 | None:intergenic | 30.0% | |
ATTCTATTAAACTGCCAAGT+TGG | - | chr2_4:14204122-14204141 | Msa0316910:intron | 30.0% | |
TAACAAGTGGGTAAAACATA+AGG | + | chr2_4:14204180-14204199 | None:intergenic | 30.0% | |
TTAGCCACAAACTTTCAATT+TGG | - | chr2_4:14204218-14204237 | Msa0316910:intron | 30.0% | |
! | CATTTTTCACCTGATTCAAA+CGG | - | chr2_4:14204462-14204481 | Msa0316910:intron | 30.0% |
! | TATTTTGTGCAGTTCACTTT+TGG | - | chr2_4:14204575-14204594 | Msa0316910:intron | 30.0% |
!! | ATTTTGTGCAGTTCACTTTT+GGG | - | chr2_4:14204576-14204595 | Msa0316910:intron | 30.0% |
! | TTTTGCAAAATCAGCAACAT+TGG | + | chr2_4:14204632-14204651 | None:intergenic | 30.0% |
CATTCCATAATTCATTCACT+TGG | + | chr2_4:14204787-14204806 | None:intergenic | 30.0% | |
ACCTTAAAAACCTTATGCTA+TGG | - | chr2_4:14205381-14205400 | Msa0316910:intron | 30.0% | |
! | ACCATAGCATAAGGTTTTTA+AGG | + | chr2_4:14205385-14205404 | None:intergenic | 30.0% |
TTAAAAACCTTATGCTATGG+TGG | - | chr2_4:14205384-14205403 | Msa0316910:intron | 30.0% | |
AAATGTTGCTGTGTTAATTG+AGG | + | chr2_4:14205439-14205458 | None:intergenic | 30.0% | |
! | CTTTGGTTCACTTATCATAA+TGG | - | chr2_4:14205496-14205515 | Msa0316910:intron | 30.0% |
!!! | TTTCCTACTCTTATTTTCTC+CGG | + | chr2_4:14205522-14205541 | None:intergenic | 30.0% |
GAAAATTGAGAACTACTACA+TGG | - | chr2_4:14205538-14205557 | Msa0316910:intron | 30.0% | |
AACTAACATGTCAAGGATTA+TGG | + | chr2_4:14205627-14205646 | None:intergenic | 30.0% | |
ACATTATGATTCAATGTGCA+TGG | - | chr2_4:14205797-14205816 | Msa0316910:intron | 30.0% | |
! | ATCATCAACAACGTACTTTT+GGG | + | chr2_4:14205823-14205842 | None:intergenic | 30.0% |
! | TATCATCAACAACGTACTTT+TGG | + | chr2_4:14205824-14205843 | None:intergenic | 30.0% |
!! | GTGTTTGAGTTTCCAATTTT+TGG | + | chr2_4:14205870-14205889 | None:intergenic | 30.0% |
! | GTGATAGCCATGATATATTT+TGG | - | chr2_4:14206043-14206062 | Msa0316910:intron | 30.0% |
!! | ATAGCCATGATATATTTTGG+TGG | - | chr2_4:14206046-14206065 | Msa0316910:intron | 30.0% |
AACACCACCAAAATATATCA+TGG | + | chr2_4:14206053-14206072 | None:intergenic | 30.0% | |
GATTGAAAGCGAATTCGATT+TGG | + | chr2_4:14203047-14203066 | None:intergenic | 35.0% | |
GAAAATTCGAAGTAACTCAC+TGG | + | chr2_4:14203156-14203175 | None:intergenic | 35.0% | |
!! | CCTAGTTTGTTTGTCTTTCA+TGG | + | chr2_4:14203757-14203776 | None:intergenic | 35.0% |
CCATGAAAGACAAACAAACT+AGG | - | chr2_4:14203754-14203773 | Msa0316910:intron | 35.0% | |
AAAGACAAACAAACTAGGGT+TGG | - | chr2_4:14203759-14203778 | Msa0316910:intron | 35.0% | |
AAGACAAACAAACTAGGGTT+GGG | - | chr2_4:14203760-14203779 | Msa0316910:intron | 35.0% | |
AAGTGTGTATGAGTGTATTC+TGG | - | chr2_4:14203819-14203838 | Msa0316910:intron | 35.0% | |
TGAGTGTATTCTGACCTAAT+TGG | + | chr2_4:14203908-14203927 | None:intergenic | 35.0% | |
TCTGATAGATGGATCATTCA+GGG | + | chr2_4:14204016-14204035 | None:intergenic | 35.0% | |
AATGATCCATCTATCAGACA+AGG | - | chr2_4:14204018-14204037 | Msa0316910:intron | 35.0% | |
GTTAAATATAGGGACCAACT+TGG | + | chr2_4:14204139-14204158 | None:intergenic | 35.0% | |
! | TTACCCACTTGTTAGCAATT+TGG | - | chr2_4:14204186-14204205 | Msa0316910:intron | 35.0% |
AGACCAAATTGCTAACAAGT+GGG | + | chr2_4:14204192-14204211 | None:intergenic | 35.0% | |
GGAACCAAATTGAAAGTTTG+TGG | + | chr2_4:14204225-14204244 | None:intergenic | 35.0% | |
TAATCTCGAGAACCTATTTG+AGG | - | chr2_4:14204331-14204350 | Msa0316910:intron | 35.0% | |
TCAACACTTGACAACAACAT+TGG | + | chr2_4:14204512-14204531 | None:intergenic | 35.0% | |
AGTGAACTGCACAAAATAAG+TGG | + | chr2_4:14204573-14204592 | None:intergenic | 35.0% | |
CTTTCCTATCCTCAACAAAT+AGG | - | chr2_4:14204664-14204683 | Msa0316910:intron | 35.0% | |
! | CATACCTATTTGTTGAGGAT+AGG | + | chr2_4:14204671-14204690 | None:intergenic | 35.0% |
ATGCCCAAGTGAATGAATTA+TGG | - | chr2_4:14204780-14204799 | Msa0316910:CDS | 35.0% | |
ACAGCTGTGTCAAAAAGAAA+AGG | + | chr2_4:14204888-14204907 | None:intergenic | 35.0% | |
CACATCACATATAGTGATGA+AGG | + | chr2_4:14205089-14205108 | None:intergenic | 35.0% | |
ATGTGATGTGTGCATAATTC+AGG | - | chr2_4:14205099-14205118 | Msa0316910:intron | 35.0% | |
TATATACTGAGAGAGCTGAT+TGG | + | chr2_4:14205338-14205357 | None:intergenic | 35.0% | |
TTTAACACCACCATAGCATA+AGG | + | chr2_4:14205394-14205413 | None:intergenic | 35.0% | |
TAGTTGCAACTAACATGTCA+AGG | + | chr2_4:14205634-14205653 | None:intergenic | 35.0% | |
TATATCATGGCTATCACACA+AGG | + | chr2_4:14206040-14206059 | None:intergenic | 35.0% | |
CAACATGAAAATTGCAATCC+AGG | + | chr2_4:14206240-14206259 | None:intergenic | 35.0% | |
GCAAAGAAGACTTACAACAA+GGG | + | chr2_4:14206372-14206391 | None:intergenic | 35.0% | |
TGCAAAGAAGACTTACAACA+AGG | + | chr2_4:14206373-14206392 | None:intergenic | 35.0% | |
CTTCAAAGCTTCAAGCTTTC+TGG | - | chr2_4:14203108-14203127 | Msa0316910:three_prime_UTR | 40.0% | |
!!! | CGAAGTAACTCACTGGTTTT+GGG | + | chr2_4:14203149-14203168 | None:intergenic | 40.0% |
!!! | TCGAAGTAACTCACTGGTTT+TGG | + | chr2_4:14203150-14203169 | None:intergenic | 40.0% |
GTGTGAAGTAGCATAATGTG+AGG | - | chr2_4:14203513-14203532 | Msa0316910:intron | 40.0% | |
AAACATGTACCTTGTATGCG+AGG | - | chr2_4:14203708-14203727 | Msa0316910:CDS | 40.0% | |
ATGAGTGTATTCTGGCCTAA+TGG | - | chr2_4:14203827-14203846 | Msa0316910:intron | 40.0% | |
TGAGTGTATTCTGGCCTAAT+GGG | - | chr2_4:14203828-14203847 | Msa0316910:intron | 40.0% | |
AAGCCATGAGAGACAAACTA+GGG | + | chr2_4:14203973-14203992 | None:intergenic | 40.0% | |
GTCTGATAGATGGATCATTC+AGG | + | chr2_4:14204017-14204036 | None:intergenic | 40.0% | |
TGTGTACCTTGTCTGATAGA+TGG | + | chr2_4:14204027-14204046 | None:intergenic | 40.0% | |
GAGACCAAATTGCTAACAAG+TGG | + | chr2_4:14204193-14204212 | None:intergenic | 40.0% | |
GAATTTGGATCCTGACTCTA+AGG | - | chr2_4:14204258-14204277 | Msa0316910:intron | 40.0% | |
TCATACTAGTCCTTAGAGTC+AGG | + | chr2_4:14204271-14204290 | None:intergenic | 40.0% | |
GAGTCAAATTTGACAGAGAC+TGG | - | chr2_4:14204289-14204308 | Msa0316910:intron | 40.0% | |
AAATTCATCCCTAACTCTGC+AGG | + | chr2_4:14204361-14204380 | None:intergenic | 40.0% | |
TGCAGAGTTAGGGATGAATT+TGG | - | chr2_4:14204360-14204379 | Msa0316910:intron | 40.0% | |
AGAGTTAGGGATGAATTTGG+TGG | - | chr2_4:14204363-14204382 | Msa0316910:intron | 40.0% | |
AAGAGACAACCGTTTGAATC+AGG | + | chr2_4:14204474-14204493 | None:intergenic | 40.0% | |
! | TTGACAACAACATTGGTGAC+TGG | + | chr2_4:14204505-14204524 | None:intergenic | 40.0% |
TTTGGGCACCTACATTTAAG+TGG | - | chr2_4:14204593-14204612 | Msa0316910:intron | 40.0% | |
TTGGGCACCTACATTTAAGT+GGG | - | chr2_4:14204594-14204613 | Msa0316910:intron | 40.0% | |
CTGATACCCCACTTAAATGT+AGG | + | chr2_4:14204604-14204623 | None:intergenic | 40.0% | |
! | ATGCGCATACCTATTTGTTG+AGG | + | chr2_4:14204676-14204695 | None:intergenic | 40.0% |
! | CTGAATTCTTTGAAAGGAGC+AGG | - | chr2_4:14204756-14204775 | Msa0316910:CDS | 40.0% |
TTACAGCTACTGGACTTATC+TGG | - | chr2_4:14204907-14204926 | Msa0316910:intron | 40.0% | |
AGTGGTCTGAAGATCATTTG+TGG | - | chr2_4:14205021-14205040 | Msa0316910:intron | 40.0% | |
AGATCACGCAAACAACAGTA+GGG | + | chr2_4:14205299-14205318 | None:intergenic | 40.0% | |
GGTTCACTTATCATAATGGC+CGG | - | chr2_4:14205500-14205519 | Msa0316910:intron | 40.0% | |
TTGCAACGTTCACAGCAAAA+AGG | + | chr2_4:14205683-14205702 | None:intergenic | 40.0% | |
!! | TTTTGCTGTGAACGTTGCAA+TGG | - | chr2_4:14205683-14205702 | Msa0316910:intron | 40.0% |
! | ATTTGCGTGACAGTTGGTAT+AGG | + | chr2_4:14205719-14205738 | None:intergenic | 40.0% |
!! | TGAGTTTCCAATTTTTGGGC+CGG | + | chr2_4:14205865-14205884 | None:intergenic | 40.0% |
!! | ATCCTGAAGAGCATTGTAGA+AGG | - | chr2_4:14205967-14205986 | Msa0316910:intron | 40.0% |
TAACTCGTTATCTACTTCCC+AGG | - | chr2_4:14206125-14206144 | Msa0316910:intron | 40.0% | |
TCTGACGAATAATCTTGCCT+GGG | + | chr2_4:14206145-14206164 | None:intergenic | 40.0% | |
GCAAGATTATTCGTCAGAGA+AGG | - | chr2_4:14206147-14206166 | Msa0316910:intron | 40.0% | |
! | CAAAAGCACAGGTCTTAACT+TGG | + | chr2_4:14206403-14206422 | None:intergenic | 40.0% |
! | GTTAAGACCTGTGCTTTTGA+AGG | - | chr2_4:14206404-14206423 | Msa0316910:five_prime_UTR | 40.0% |
!! | GAGAGTGTCCTACAAAGTAG+AGG | + | chr2_4:14203584-14203603 | None:intergenic | 45.0% |
CGATTGAGCTATCATGAGAG+AGG | - | chr2_4:14203731-14203750 | Msa0316910:CDS | 45.0% | |
CACACACTTTGATCGTACAG+AGG | - | chr2_4:14203926-14203945 | Msa0316910:intron | 45.0% | |
! | CAACCCTAGTTTGTCTCTCA+TGG | - | chr2_4:14203967-14203986 | Msa0316910:intron | 45.0% |
GAAGCCATGAGAGACAAACT+AGG | + | chr2_4:14203974-14203993 | None:intergenic | 45.0% | |
TCTGCAGGACATCCTCAAAT+AGG | + | chr2_4:14204346-14204365 | None:intergenic | 45.0% | |
TGGGCACCTACATTTAAGTG+GGG | - | chr2_4:14204595-14204614 | Msa0316910:intron | 45.0% | |
TGAGGATAGGAAAGCTTCTC+TGG | + | chr2_4:14204658-14204677 | None:intergenic | 45.0% | |
TTACGCTTTGCTTGCACTGA+AGG | + | chr2_4:14205048-14205067 | None:intergenic | 45.0% | |
CAGATCACGCAAACAACAGT+AGG | + | chr2_4:14205300-14205319 | None:intergenic | 45.0% | |
TGGCCGGAGAAAATAAGAGT+AGG | - | chr2_4:14205516-14205535 | Msa0316910:intron | 45.0% | |
ACCAACTGTCACGCAAATTG+CGG | - | chr2_4:14205721-14205740 | Msa0316910:intron | 45.0% | |
!! | AGTTTCCAATTTTTGGGCCG+GGG | + | chr2_4:14205863-14205882 | None:intergenic | 45.0% |
!! | GAGTTTCCAATTTTTGGGCC+GGG | + | chr2_4:14205864-14205883 | None:intergenic | 45.0% |
GTCCTTCTACAATGCTCTTC+AGG | + | chr2_4:14205972-14205991 | None:intergenic | 45.0% | |
CTCTGACGAATAATCTTGCC+TGG | + | chr2_4:14206146-14206165 | None:intergenic | 45.0% | |
!! | TTAAATAAATAAATAAAAAG+GGG | + | chr2_4:14206335-14206354 | None:intergenic | 5.0% |
!! | GTTAAATAAATAAATAAAAA+GGG | + | chr2_4:14206336-14206355 | None:intergenic | 5.0% |
!! | TGTTAAATAAATAAATAAAA+AGG | + | chr2_4:14206337-14206356 | None:intergenic | 5.0% |
!! | GCTTTCTGGAATCATCCAGC+TGG | - | chr2_4:14203122-14203141 | Msa0316910:three_prime_UTR | 50.0% |
TGAGGATGTCCTGCAGAGTT+AGG | - | chr2_4:14204349-14204368 | Msa0316910:intron | 50.0% | |
GAGGATGTCCTGCAGAGTTA+GGG | - | chr2_4:14204350-14204369 | Msa0316910:intron | 50.0% | |
GGATAGGAAAGCTTCTCTGG+TGG | + | chr2_4:14204655-14204674 | None:intergenic | 50.0% | |
GACACAGCTGTTACAGCTAC+TGG | - | chr2_4:14204897-14204916 | Msa0316910:intron | 50.0% | |
AACGTTGCAATGGCAGGAAC+TGG | - | chr2_4:14205693-14205712 | Msa0316910:intron | 50.0% | |
ACCGCAATTTGCGTGACAGT+TGG | + | chr2_4:14205725-14205744 | None:intergenic | 50.0% | |
CTGTCACGCAAATTGCGGTA+AGG | - | chr2_4:14205726-14205745 | Msa0316910:intron | 50.0% | |
! | ATGTTAGTTTGGCCCTTCCC+CGG | - | chr2_4:14205843-14205862 | Msa0316910:intron | 50.0% |
TGTACTTGGAGCTCGATACC+TGG | - | chr2_4:14206219-14206238 | Msa0316910:intron | 50.0% | |
GGATGAATTACGGCAGATGG+AGG | + | chr2_4:14206314-14206333 | None:intergenic | 50.0% | |
AGGGGATGAATTACGGCAGA+TGG | + | chr2_4:14206317-14206336 | None:intergenic | 50.0% | |
!!! | TCACTGGTTTTGGGACCAGC+TGG | + | chr2_4:14203140-14203159 | None:intergenic | 55.0% |
GCTCAATCGCCTCGCATACA+AGG | + | chr2_4:14203720-14203739 | None:intergenic | 55.0% | |
GCTGTGAACGTTGCAATGGC+AGG | - | chr2_4:14205687-14205706 | Msa0316910:intron | 55.0% | |
!! | CCAATTTTTGGGCCGGGGAA+GGG | + | chr2_4:14205858-14205877 | None:intergenic | 55.0% |
!! | TCCAATTTTTGGGCCGGGGA+AGG | + | chr2_4:14205859-14205878 | None:intergenic | 55.0% |
CCCTTCCCCGGCCCAAAAAT+TGG | - | chr2_4:14205855-14205874 | Msa0316910:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 14202989 | 14206432 | 14202989 | ID=Msa0316910;Name=Msa0316910 |
chr2_4 | mRNA | 14202989 | 14206432 | 14202989 | ID=Msa0316910-mRNA-1;Parent=Msa0316910;Name=Msa0316910-mRNA-1;_AED=0.29;_eAED=0.29;_QI=112|1|1|1|1|1|5|246|106 |
chr2_4 | exon | 14202989 | 14203274 | 14202989 | ID=Msa0316910-mRNA-1:exon:5439;Parent=Msa0316910-mRNA-1 |
chr2_4 | exon | 14203679 | 14203752 | 14203679 | ID=Msa0316910-mRNA-1:exon:5438;Parent=Msa0316910-mRNA-1 |
chr2_4 | exon | 14204465 | 14204517 | 14204465 | ID=Msa0316910-mRNA-1:exon:5437;Parent=Msa0316910-mRNA-1 |
chr2_4 | exon | 14204736 | 14204834 | 14204736 | ID=Msa0316910-mRNA-1:exon:5436;Parent=Msa0316910-mRNA-1 |
chr2_4 | exon | 14206266 | 14206432 | 14206266 | ID=Msa0316910-mRNA-1:exon:5435;Parent=Msa0316910-mRNA-1 |
chr2_4 | five_prime_UTR | 14206321 | 14206432 | 14206321 | ID=Msa0316910-mRNA-1:five_prime_utr;Parent=Msa0316910-mRNA-1 |
chr2_4 | CDS | 14206266 | 14206320 | 14206266 | ID=Msa0316910-mRNA-1:cds;Parent=Msa0316910-mRNA-1 |
chr2_4 | CDS | 14204736 | 14204834 | 14204736 | ID=Msa0316910-mRNA-1:cds;Parent=Msa0316910-mRNA-1 |
chr2_4 | CDS | 14204465 | 14204517 | 14204465 | ID=Msa0316910-mRNA-1:cds;Parent=Msa0316910-mRNA-1 |
chr2_4 | CDS | 14203679 | 14203752 | 14203679 | ID=Msa0316910-mRNA-1:cds;Parent=Msa0316910-mRNA-1 |
chr2_4 | CDS | 14203235 | 14203274 | 14203235 | ID=Msa0316910-mRNA-1:cds;Parent=Msa0316910-mRNA-1 |
chr2_4 | three_prime_UTR | 14202989 | 14203234 | 14202989 | ID=Msa0316910-mRNA-1:three_prime_utr;Parent=Msa0316910-mRNA-1 |
Gene Sequence |
Protein sequence |