Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316240 | XP_013462780.1 | 86.301 | 73 | 10 | 0 | 8 | 80 | 11 | 83 | 3.99e-35 | 135 |
| Msa0316240 | XP_013462780.1 | 93.151 | 73 | 4 | 1 | 205 | 277 | 124 | 195 | 2.28e-35 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037880 | Msa0316240 | 0.814071 | 1.856452e-51 | -8.615850e-47 |
| Msa0051750 | Msa0316240 | 0.808051 | 3.744888e-50 | -8.615850e-47 |
| Msa0054480 | Msa0316240 | 0.804098 | 2.542892e-49 | -8.615850e-47 |
| Msa0063530 | Msa0316240 | 0.811428 | 7.035624e-51 | -8.615850e-47 |
| Msa0090360 | Msa0316240 | 0.826302 | 2.922259e-54 | -8.615850e-47 |
| Msa0137840 | Msa0316240 | 0.822667 | 2.095701e-53 | -8.615850e-47 |
| Msa0168230 | Msa0316240 | 0.803283 | 3.753758e-49 | -8.615850e-47 |
| Msa0171120 | Msa0316240 | 0.815398 | 9.434576e-52 | -8.615850e-47 |
| Msa0184040 | Msa0316240 | 0.827376 | 1.619305e-54 | -8.615850e-47 |
| Msa0206010 | Msa0316240 | 0.801394 | 9.194180e-49 | -8.615850e-47 |
| Msa0238320 | Msa0316240 | 0.856262 | 3.622784e-62 | -8.615850e-47 |
| Msa0316240 | Msa0319170 | 0.807874 | 4.084524e-50 | -8.615850e-47 |
| Msa0316240 | Msa0326110 | 0.805073 | 1.592016e-49 | -8.615850e-47 |
| Msa0316240 | Msa0388700 | 0.800031 | 1.743906e-48 | -8.615850e-47 |
| Msa0316240 | Msa0426900 | 0.805322 | 1.411546e-49 | -8.615850e-47 |
| Msa0316240 | Msa0481530 | 0.817591 | 3.046433e-52 | -8.615850e-47 |
| Msa0316240 | Msa0501450 | 0.805797 | 1.122052e-49 | -8.615850e-47 |
| Msa0316240 | Msa0529890 | 0.819880 | 9.205076e-53 | -8.615850e-47 |
| Msa0316240 | Msa0585560 | 0.812516 | 4.076721e-51 | -8.615850e-47 |
| Msa0316240 | Msa0598160 | 0.809818 | 1.567880e-50 | -8.615850e-47 |
| Msa0316240 | Msa0610430 | 0.815686 | 8.139333e-52 | -8.615850e-47 |
| Msa0316240 | Msa0612960 | 0.803282 | 3.755779e-49 | -8.615850e-47 |
| Msa0316240 | Msa0617640 | 0.814277 | 1.672169e-51 | -8.615850e-47 |
| Msa0316240 | Msa0625720 | 0.816962 | 4.219834e-52 | -8.615850e-47 |
| Msa0316240 | Msa0637900 | 0.802621 | 5.142635e-49 | -8.615850e-47 |
| Msa0316240 | Msa0663390 | 0.807840 | 4.152903e-50 | -8.615850e-47 |
| Msa0316240 | Msa0689260 | 0.801269 | 9.752709e-49 | -8.615850e-47 |
| Msa0316240 | Msa0698540 | 0.805586 | 1.242998e-49 | -8.615850e-47 |
| Msa0316240 | Msa0709160 | 0.801650 | 8.145827e-49 | -8.615850e-47 |
| Msa0316240 | Msa0711780 | 0.808483 | 3.028962e-50 | -8.615850e-47 |
| Msa0316240 | Msa0715700 | 0.821173 | 4.648456e-53 | -8.615850e-47 |
| Msa0316240 | Msa0719480 | 0.807892 | 4.048377e-50 | -8.615850e-47 |
| Msa0316240 | Msa0721280 | 0.826889 | 2.117892e-54 | -8.615850e-47 |
| Msa0316240 | Msa0760350 | 0.812277 | 4.596059e-51 | -8.615850e-47 |
| Msa0316240 | Msa0801730 | 0.822853 | 1.896852e-53 | -8.615850e-47 |
| Msa0316240 | Msa0830540 | 0.808917 | 2.446298e-50 | -8.615850e-47 |
| Msa0316240 | Msa0932570 | 0.800522 | 1.385428e-48 | -8.615850e-47 |
| Msa0316240 | Msa0970530 | 0.822392 | 2.427713e-53 | -8.615850e-47 |
| Msa0316240 | Msa0970600 | 0.802763 | 4.807581e-49 | -8.615850e-47 |
| Msa0316240 | Msa0980880 | 0.824610 | 7.352355e-54 | -8.615850e-47 |
| Msa0316240 | Msa0999100 | 0.835106 | 2.034781e-56 | -8.615850e-47 |
| Msa0316240 | Msa1031770 | 0.806399 | 8.384677e-50 | -8.615850e-47 |
| Msa0316240 | Msa1144890 | 0.807885 | 4.062151e-50 | -8.615850e-47 |
| Msa0316240 | Msa1154280 | 0.804188 | 2.435815e-49 | -8.615850e-47 |
| Msa0316240 | Msa1160590 | 0.801328 | 9.483878e-49 | -8.615850e-47 |
| Msa0316240 | Msa1169550 | 0.824918 | 6.220903e-54 | -8.615850e-47 |
| Msa0316240 | Msa1197410 | 0.801495 | 8.765649e-49 | -8.615850e-47 |
| Msa0316240 | Msa1208880 | 0.800680 | 1.286649e-48 | -8.615850e-47 |
| Msa0316240 | Msa1209760 | 0.817700 | 2.877997e-52 | -8.615850e-47 |
| Msa0316240 | Msa1245930 | 0.805940 | 1.047000e-49 | -8.615850e-47 |
| Msa0316240 | Msa1259060 | 0.802950 | 4.399449e-49 | -8.615850e-47 |
| Msa0316240 | Msa1294820 | 0.806534 | 7.851665e-50 | -8.615850e-47 |
| Msa0316240 | Msa1305660 | 0.800134 | 1.661936e-48 | -8.615850e-47 |
| Msa0316240 | Msa1306920 | 0.806262 | 8.961274e-50 | -8.615850e-47 |
| Msa0316240 | Msa1353980 | 0.808011 | 3.819650e-50 | -8.615850e-47 |
| Msa0316240 | Msa1357890 | 0.825259 | 5.168732e-54 | -8.615850e-47 |
| Msa0316240 | Msa1398090 | 0.814636 | 1.392784e-51 | -8.615850e-47 |
| Msa0316240 | Msa1400580 | 0.801607 | 8.312439e-49 | -8.615850e-47 |
| Msa0316240 | Msa1401420 | 0.809316 | 2.009299e-50 | -8.615850e-47 |
| Msa0316240 | Msa1403340 | 0.806227 | 9.114628e-50 | -8.615850e-47 |
| Msa0316240 | Msa1417200 | 0.808639 | 2.805574e-50 | -8.615850e-47 |
| Msa0316240 | Msa1419870 | 0.805021 | 1.631836e-49 | -8.615850e-47 |
| Msa0316240 | Msa1433390 | 0.822589 | 2.184532e-53 | -8.615850e-47 |
| Msa0316240 | Msa1437270 | 0.800958 | 1.128742e-48 | -8.615850e-47 |
| Msa0316240 | Msa1443850 | 0.811816 | 5.794762e-51 | -8.615850e-47 |
| Msa0316240 | Msa1457920 | 0.810416 | 1.165435e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0316240 | MtrunA17_Chr2g0288061 | 86.301 | 73 | 10 | 0 | 8 | 80 | 11 | 83 | 4.13e-39 | 135 |
| Msa0316240 | MtrunA17_Chr2g0288061 | 93.846 | 65 | 3 | 1 | 205 | 269 | 124 | 187 | 1.60e-33 | 120 |
| Msa0316240 | MtrunA17_Chr2g0287401 | 51.351 | 74 | 36 | 0 | 1 | 74 | 2 | 75 | 3.31e-15 | 71.6 |
| Msa0316240 | MtrunA17_Chr2g0286581 | 59.259 | 54 | 22 | 0 | 1 | 54 | 12 | 65 | 1.68e-14 | 70.5 |
| Msa0316240 | MtrunA17_Chr2g0287311 | 48.649 | 74 | 38 | 0 | 1 | 74 | 12 | 85 | 2.69e-14 | 70.1 |
| Msa0316240 | MtrunA17_Chr2g0287371 | 48.305 | 118 | 40 | 1 | 1 | 118 | 5 | 101 | 4.00e-14 | 70.1 |
| Msa0316240 | MtrunA17_Chr2g0287321 | 52.055 | 73 | 35 | 0 | 1 | 73 | 11 | 83 | 6.69e-14 | 68.6 |
| Msa0316240 | MtrunA17_Chr1g0156951 | 48.438 | 64 | 29 | 1 | 1 | 64 | 1 | 60 | 1.13e-11 | 63.2 |
| Msa0316240 | MtrunA17_Chr4g0019961 | 47.143 | 70 | 37 | 0 | 1 | 70 | 1 | 70 | 6.21e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 35 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCGAAAAGAAGAGGATT+TGG | 0.329420 | 2_4:-13120713 | Msa0316240:CDS |
| AACGGACCTGCAGAATGTTT+TGG | 0.341546 | 2_4:+13120155 | None:intergenic |
| GGAAGACTTTAATCGTTTAA+CGG | 0.443117 | 2_4:+13120741 | None:intergenic |
| CATTCATGACTTGAGATAAA+CGG | 0.459596 | 2_4:+13120137 | None:intergenic |
| GGCGCTGATGGCGGAAGGCA+CGG | 0.460933 | 2_4:-13120950 | None:intergenic |
| CGCTTGGTTCAACTCTAGAA+AGG | 0.462208 | 2_4:+13120881 | None:intergenic |
| AGAAGAAGTAGATGATGAAG+AGG | 0.475837 | 2_4:-13120683 | Msa0316240:CDS |
| CGAGTTGCTTCGAAAAGAAG+AGG | 0.487698 | 2_4:-13120719 | Msa0316240:CDS |
| CAAGCGTTTATCTGCAATTG+AGG | 0.488368 | 2_4:-13120864 | Msa0316240:CDS |
| ATTTCGATAATCAGATCCTC+CGG | 0.496089 | 2_4:+13120904 | None:intergenic |
| CTCAATTGCAGATAAACGCT+TGG | 0.514934 | 2_4:+13120865 | None:intergenic |
| GTGTCTCCAAAACATTCTGC+AGG | 0.545478 | 2_4:-13120161 | Msa0316240:CDS |
| TATTGAGTTTCTGCGGCAGA+AGG | 0.548094 | 2_4:-13120284 | Msa0316240:CDS |
| GCAGAAGGAGGCAGTTCCGT+TGG | 0.553372 | 2_4:-13120269 | Msa0316240:CDS |
| TGAAGAAGAGGAGAAAGAAT+CGG | 0.556114 | 2_4:-13120320 | Msa0316240:CDS |
| GTCACAGAACGCGATACTCC+CGG | 0.563110 | 2_4:-13120923 | Msa0316240:CDS |
| TGGTGGTGGTTCTGAAGAAG+AGG | 0.571049 | 2_4:-13120332 | Msa0316240:CDS |
| CGAAAAGAAGAGGATTTGGA+TGG | 0.572187 | 2_4:-13120709 | Msa0316240:CDS |
| AATTGAGGTGCGTATGCAAA+TGG | 0.587049 | 2_4:-13120849 | Msa0316240:CDS |
| ACGACGGCGCTGATGGCGGA+AGG | 0.604197 | 2_4:-13120955 | None:intergenic |
| TGAGTTTCTGCGGCAGAAGG+AGG | 0.614751 | 2_4:-13120281 | Msa0316240:CDS |
| TTTCGATAATCAGATCCTCC+GGG | 0.622988 | 2_4:+13120905 | None:intergenic |
| TTTGATGATGATGAAGACAA+TGG | 0.624005 | 2_4:-13120535 | Msa0316240:CDS |
| CAGAGATGAAATGCAAATAG+CGG | 0.644769 | 2_4:-13120197 | Msa0316240:CDS |
| GTTGATGAAGACAATGGTGG+TGG | 0.645971 | 2_4:-13120346 | Msa0316240:CDS |
| AAGTAGTTATTGAGTTTCTG+CGG | 0.650429 | 2_4:-13120291 | Msa0316240:CDS |
| AGATGAAATGCAAATAGCGG+AGG | 0.653702 | 2_4:-13120194 | Msa0316240:CDS |
| GATGATGAAGACAATGGTGG+TGG | 0.658810 | 2_4:-13120529 | Msa0316240:CDS |
| GAGAATGTTGATGAAGACAA+TGG | 0.662623 | 2_4:-13120352 | Msa0316240:CDS |
| TGAGGTGCGTATGCAAATGG+TGG | 0.665483 | 2_4:-13120846 | Msa0316240:CDS |
| GATGATGATGAAGACAATGG+TGG | 0.671380 | 2_4:-13120532 | Msa0316240:CDS |
| AAGAGGAGAAAGAATCGGCG+TGG | 0.679826 | 2_4:-13120315 | Msa0316240:CDS |
| AATGTTGATGAAGACAATGG+TGG | 0.715735 | 2_4:-13120349 | Msa0316240:CDS |
| GCTGATGGCGGAAGGCACGG+CGG | 0.728631 | 2_4:-13120947 | None:intergenic |
| ACAGAACGCGATACTCCCGG+AGG | 0.809853 | 2_4:-13120920 | Msa0316240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTTGAAGATTTTG+AGG | - | chr2_4:13120829-13120848 | Msa0316240:CDS | 15.0% |
| !!! | TAATTTTTTGAAGATTTTGA+GGG | - | chr2_4:13120830-13120849 | Msa0316240:CDS | 15.0% |
| !!! | ATAATTTTTTGAAGATTTTG+AGG | - | chr2_4:13120829-13120848 | Msa0316240:CDS | 15.0% |
| !!! | TAATTTTTTGAAGATTTTGA+GGG | - | chr2_4:13120830-13120849 | Msa0316240:CDS | 15.0% |
| !!! | TGTTTTTGATCGTTATTTAT+TGG | - | chr2_4:13120260-13120279 | Msa0316240:CDS | 20.0% |
| !! | ATCTTCAAAAAATTATCCAA+CGG | + | chr2_4:13120825-13120844 | None:intergenic | 20.0% |
| !!! | AATTTTTTGAAGATTTTGAG+GGG | - | chr2_4:13120831-13120850 | Msa0316240:CDS | 20.0% |
| !!! | TGTTTTTGATCGTTATTTAT+TGG | - | chr2_4:13120260-13120279 | Msa0316240:CDS | 20.0% |
| !! | ATCTTCAAAAAATTATCCAA+CGG | + | chr2_4:13120825-13120844 | None:intergenic | 20.0% |
| !!! | AATTTTTTGAAGATTTTGAG+GGG | - | chr2_4:13120831-13120850 | Msa0316240:CDS | 20.0% |
| GGAAGACTTTAATCGTTTAA+CGG | + | chr2_4:13120337-13120356 | None:intergenic | 30.0% | |
| !! | TTTGATGATGATGAAGACAA+TGG | - | chr2_4:13120540-13120559 | Msa0316240:CDS | 30.0% |
| AAGTAGTTATTGAGTTTCTG+CGG | - | chr2_4:13120784-13120803 | Msa0316240:CDS | 30.0% | |
| CATTCATGACTTGAGATAAA+CGG | + | chr2_4:13120941-13120960 | None:intergenic | 30.0% | |
| GGAAGACTTTAATCGTTTAA+CGG | + | chr2_4:13120337-13120356 | None:intergenic | 30.0% | |
| !! | TTTGATGATGATGAAGACAA+TGG | - | chr2_4:13120540-13120559 | Msa0316240:CDS | 30.0% |
| AAGTAGTTATTGAGTTTCTG+CGG | - | chr2_4:13120784-13120803 | Msa0316240:CDS | 30.0% | |
| CATTCATGACTTGAGATAAA+CGG | + | chr2_4:13120941-13120960 | None:intergenic | 30.0% | |
| ATTTCGATAATCAGATCCTC+CGG | + | chr2_4:13120174-13120193 | None:intergenic | 35.0% | |
| AGAAGAAGTAGATGATGAAG+AGG | - | chr2_4:13120392-13120411 | Msa0316240:CDS | 35.0% | |
| ! | GAGAATGTTGATGAAGACAA+TGG | - | chr2_4:13120723-13120742 | Msa0316240:CDS | 35.0% |
| ! | AATGTTGATGAAGACAATGG+TGG | - | chr2_4:13120726-13120745 | Msa0316240:CDS | 35.0% |
| TGAAGAAGAGGAGAAAGAAT+CGG | - | chr2_4:13120755-13120774 | Msa0316240:CDS | 35.0% | |
| CAGAGATGAAATGCAAATAG+CGG | - | chr2_4:13120878-13120897 | Msa0316240:CDS | 35.0% | |
| ATTTCGATAATCAGATCCTC+CGG | + | chr2_4:13120174-13120193 | None:intergenic | 35.0% | |
| AGAAGAAGTAGATGATGAAG+AGG | - | chr2_4:13120392-13120411 | Msa0316240:CDS | 35.0% | |
| ! | GAGAATGTTGATGAAGACAA+TGG | - | chr2_4:13120723-13120742 | Msa0316240:CDS | 35.0% |
| ! | AATGTTGATGAAGACAATGG+TGG | - | chr2_4:13120726-13120745 | Msa0316240:CDS | 35.0% |
| TGAAGAAGAGGAGAAAGAAT+CGG | - | chr2_4:13120755-13120774 | Msa0316240:CDS | 35.0% | |
| CAGAGATGAAATGCAAATAG+CGG | - | chr2_4:13120878-13120897 | Msa0316240:CDS | 35.0% | |
| TTTCGATAATCAGATCCTCC+GGG | + | chr2_4:13120173-13120192 | None:intergenic | 40.0% | |
| CTCAATTGCAGATAAACGCT+TGG | + | chr2_4:13120213-13120232 | None:intergenic | 40.0% | |
| CAAGCGTTTATCTGCAATTG+AGG | - | chr2_4:13120211-13120230 | Msa0316240:CDS | 40.0% | |
| AATTGAGGTGCGTATGCAAA+TGG | - | chr2_4:13120226-13120245 | Msa0316240:CDS | 40.0% | |
| ! | CTCTTCTTTTCGAAGCAACT+CGG | + | chr2_4:13120358-13120377 | None:intergenic | 40.0% |
| GCTTCGAAAAGAAGAGGATT+TGG | - | chr2_4:13120362-13120381 | Msa0316240:CDS | 40.0% | |
| CGAAAAGAAGAGGATTTGGA+TGG | - | chr2_4:13120366-13120385 | Msa0316240:CDS | 40.0% | |
| ! | GATGATGATGAAGACAATGG+TGG | - | chr2_4:13120543-13120562 | Msa0316240:CDS | 40.0% |
| AGATGAAATGCAAATAGCGG+AGG | - | chr2_4:13120881-13120900 | Msa0316240:CDS | 40.0% | |
| TTTCGATAATCAGATCCTCC+GGG | + | chr2_4:13120173-13120192 | None:intergenic | 40.0% | |
| CTCAATTGCAGATAAACGCT+TGG | + | chr2_4:13120213-13120232 | None:intergenic | 40.0% | |
| CAAGCGTTTATCTGCAATTG+AGG | - | chr2_4:13120211-13120230 | Msa0316240:CDS | 40.0% | |
| AATTGAGGTGCGTATGCAAA+TGG | - | chr2_4:13120226-13120245 | Msa0316240:CDS | 40.0% | |
| ! | CTCTTCTTTTCGAAGCAACT+CGG | + | chr2_4:13120358-13120377 | None:intergenic | 40.0% |
| GCTTCGAAAAGAAGAGGATT+TGG | - | chr2_4:13120362-13120381 | Msa0316240:CDS | 40.0% | |
| CGAAAAGAAGAGGATTTGGA+TGG | - | chr2_4:13120366-13120385 | Msa0316240:CDS | 40.0% | |
| ! | GATGATGATGAAGACAATGG+TGG | - | chr2_4:13120543-13120562 | Msa0316240:CDS | 40.0% |
| AGATGAAATGCAAATAGCGG+AGG | - | chr2_4:13120881-13120900 | Msa0316240:CDS | 40.0% | |
| ! | CGCTTGGTTCAACTCTAGAA+AGG | + | chr2_4:13120197-13120216 | None:intergenic | 45.0% |
| CGAGTTGCTTCGAAAAGAAG+AGG | - | chr2_4:13120356-13120375 | Msa0316240:CDS | 45.0% | |
| GATGATGAAGACAATGGTGG+TGG | - | chr2_4:13120546-13120565 | Msa0316240:CDS | 45.0% | |
| ! | GTTGATGAAGACAATGGTGG+TGG | - | chr2_4:13120729-13120748 | Msa0316240:CDS | 45.0% |
| TATTGAGTTTCTGCGGCAGA+AGG | - | chr2_4:13120791-13120810 | Msa0316240:CDS | 45.0% | |
| GTGTCTCCAAAACATTCTGC+AGG | - | chr2_4:13120914-13120933 | Msa0316240:CDS | 45.0% | |
| ! | AACGGACCTGCAGAATGTTT+TGG | + | chr2_4:13120923-13120942 | None:intergenic | 45.0% |
| ! | CGCTTGGTTCAACTCTAGAA+AGG | + | chr2_4:13120197-13120216 | None:intergenic | 45.0% |
| CGAGTTGCTTCGAAAAGAAG+AGG | - | chr2_4:13120356-13120375 | Msa0316240:CDS | 45.0% | |
| GATGATGAAGACAATGGTGG+TGG | - | chr2_4:13120546-13120565 | Msa0316240:CDS | 45.0% | |
| ! | GTTGATGAAGACAATGGTGG+TGG | - | chr2_4:13120729-13120748 | Msa0316240:CDS | 45.0% |
| TATTGAGTTTCTGCGGCAGA+AGG | - | chr2_4:13120791-13120810 | Msa0316240:CDS | 45.0% | |
| GTGTCTCCAAAACATTCTGC+AGG | - | chr2_4:13120914-13120933 | Msa0316240:CDS | 45.0% | |
| ! | AACGGACCTGCAGAATGTTT+TGG | + | chr2_4:13120923-13120942 | None:intergenic | 45.0% |
| TGAGGTGCGTATGCAAATGG+TGG | - | chr2_4:13120229-13120248 | Msa0316240:CDS | 50.0% | |
| !! | TGGTGGTGGTTCTGAAGAAG+AGG | - | chr2_4:13120560-13120579 | Msa0316240:CDS | 50.0% |
| AAGAGGAGAAAGAATCGGCG+TGG | - | chr2_4:13120760-13120779 | Msa0316240:CDS | 50.0% | |
| TGAGGTGCGTATGCAAATGG+TGG | - | chr2_4:13120229-13120248 | Msa0316240:CDS | 50.0% | |
| !! | TGGTGGTGGTTCTGAAGAAG+AGG | - | chr2_4:13120560-13120579 | Msa0316240:CDS | 50.0% |
| AAGAGGAGAAAGAATCGGCG+TGG | - | chr2_4:13120760-13120779 | Msa0316240:CDS | 50.0% | |
| GTCACAGAACGCGATACTCC+CGG | - | chr2_4:13120152-13120171 | Msa0316240:CDS | 55.0% | |
| TGAGTTTCTGCGGCAGAAGG+AGG | - | chr2_4:13120794-13120813 | Msa0316240:CDS | 55.0% | |
| GTCACAGAACGCGATACTCC+CGG | - | chr2_4:13120152-13120171 | Msa0316240:CDS | 55.0% | |
| TGAGTTTCTGCGGCAGAAGG+AGG | - | chr2_4:13120794-13120813 | Msa0316240:CDS | 55.0% | |
| ACAGAACGCGATACTCCCGG+AGG | - | chr2_4:13120155-13120174 | Msa0316240:CDS | 60.0% | |
| GCAGAAGGAGGCAGTTCCGT+TGG | - | chr2_4:13120806-13120825 | Msa0316240:CDS | 60.0% | |
| ACAGAACGCGATACTCCCGG+AGG | - | chr2_4:13120155-13120174 | Msa0316240:CDS | 60.0% | |
| GCAGAAGGAGGCAGTTCCGT+TGG | - | chr2_4:13120806-13120825 | Msa0316240:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 13120132 | 13120965 | 13120132 | ID=Msa0316240;Name=Msa0316240 |
| chr2_4 | mRNA | 13120132 | 13120965 | 13120132 | ID=Msa0316240-mRNA-1;Parent=Msa0316240;Name=Msa0316240-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|277 |
| chr2_4 | exon | 13120132 | 13120965 | 13120132 | ID=Msa0316240-mRNA-1:exon:4991;Parent=Msa0316240-mRNA-1 |
| chr2_4 | CDS | 13120132 | 13120965 | 13120132 | ID=Msa0316240-mRNA-1:cds;Parent=Msa0316240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
