AlfalfaGEDB | Msa1197410

M. sativa cultivar zhongmu-4 / Msa1197410

KEGG: K09716
GO: GO:0002161 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006399 GO:0006450 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0034660 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0051499 GO:0052689 GO:0065007 GO:0065008 GO:0071704 GO:0090304 GO:0106074 GO:0140098 GO:0140101 GO:1901360
PFAM: PF04414.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1197410	XP_004509954.1	95.575	113	5	0	24	136	249	361	3.96e-71	227

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1197410	sp\|Q9ZPQ3\|GEK1_ARATH	69.565	115	31	1	25	135	202	316	1.76e-53	173

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001790	Msa1197410	0.803101	4.093926e-49	-8.615850e-47
Msa0002230	Msa1197410	0.809276	2.049950e-50	-8.615850e-47
Msa0002240	Msa1197410	0.811121	8.203860e-51	-8.615850e-47
Msa0007440	Msa1197410	0.813346	2.682104e-51	-8.615850e-47
Msa0011170	Msa1197410	0.816113	6.538391e-52	-8.615850e-47
Msa0012040	Msa1197410	0.808799	2.593334e-50	-8.615850e-47
Msa0013050	Msa1197410	-0.800585	1.344848e-48	-8.615850e-47
Msa0014710	Msa1197410	0.809050	2.291860e-50	-8.615850e-47
Msa0020300	Msa1197410	0.818313	2.092523e-52	-8.615850e-47
Msa0028660	Msa1197410	0.811726	6.060079e-51	-8.615850e-47
Msa0036140	Msa1197410	0.808830	2.554004e-50	-8.615850e-47
Msa0037880	Msa1197410	0.805515	1.285889e-49	-8.615850e-47
Msa0039330	Msa1197410	0.814123	1.807990e-51	-8.615850e-47
Msa0040450	Msa1197410	0.801209	1.003055e-48	-8.615850e-47
Msa0043980	Msa1197410	0.816497	5.364834e-52	-8.615850e-47
Msa0067620	Msa1197410	0.812734	3.652045e-51	-8.615850e-47
Msa0078900	Msa1197410	0.805282	1.438991e-49	-8.615850e-47
Msa0081930	Msa1197410	0.804085	2.559013e-49	-8.615850e-47
Msa0084380	Msa1197410	0.803307	3.710665e-49	-8.615850e-47
Msa0095560	Msa1197410	0.810351	1.203702e-50	-8.615850e-47
Msa0101710	Msa1197410	0.802439	5.608002e-49	-8.615850e-47
Msa0106670	Msa1197410	0.804300	2.308266e-49	-8.615850e-47
Msa0113750	Msa1197410	0.827847	1.247467e-54	-8.615850e-47
Msa0114060	Msa1197410	0.801192	1.010976e-48	-8.615850e-47
Msa0119850	Msa1197410	0.833117	6.413086e-56	-8.615850e-47
Msa0607540	Msa1197410	0.801361	9.337437e-49	-8.615850e-47
Msa0610430	Msa1197410	0.828528	8.551351e-55	-8.615850e-47
Msa0617640	Msa1197410	0.832946	7.072628e-56	-8.615850e-47
Msa0621490	Msa1197410	0.816471	5.435372e-52	-8.615850e-47
Msa0631200	Msa1197410	0.801373	9.285354e-49	-8.615850e-47
Msa0638070	Msa1197410	0.801872	7.336235e-49	-8.615850e-47
Msa0643180	Msa1197410	0.804873	1.752638e-49	-8.615850e-47
Msa0648880	Msa1197410	0.808805	2.585259e-50	-8.615850e-47
Msa0649350	Msa1197410	0.812547	4.012730e-51	-8.615850e-47
Msa0657610	Msa1197410	0.813952	1.972078e-51	-8.615850e-47
Msa0661190	Msa1197410	-0.819089	1.394852e-52	-8.615850e-47
Msa0669440	Msa1197410	0.830440	2.933102e-55	-8.615850e-47
Msa0679710	Msa1197410	0.809373	1.953560e-50	-8.615850e-47
Msa0691380	Msa1197410	0.824615	7.334560e-54	-8.615850e-47
Msa0692230	Msa1197410	0.812093	5.041954e-51	-8.615850e-47
Msa0692830	Msa1197410	0.806494	8.005911e-50	-8.615850e-47
Msa0692950	Msa1197410	0.808767	2.634930e-50	-8.615850e-47
Msa0693380	Msa1197410	0.808969	2.384677e-50	-8.615850e-47
Msa0701920	Msa1197410	0.805448	1.328742e-49	-8.615850e-47
Msa0706400	Msa1197410	0.804623	1.976084e-49	-8.615850e-47
Msa0711790	Msa1197410	0.811049	8.504317e-51	-8.615850e-47
Msa0716840	Msa1197410	0.836944	6.953023e-57	-8.615850e-47
Msa0719480	Msa1197410	0.801683	8.020861e-49	-8.615850e-47
Msa0724210	Msa1197410	0.800578	1.349865e-48	-8.615850e-47
Msa0743950	Msa1197410	0.801639	8.190633e-49	-8.615850e-47
Msa0745790	Msa1197410	0.812324	4.489093e-51	-8.615850e-47
Msa0750430	Msa1197410	0.803789	2.947444e-49	-8.615850e-47
Msa0762970	Msa1197410	0.805912	1.061576e-49	-8.615850e-47
Msa0769920	Msa1197410	0.816239	6.126276e-52	-8.615850e-47
Msa0771720	Msa1197410	0.831863	1.311363e-55	-8.615850e-47
Msa0773840	Msa1197410	0.814344	1.616486e-51	-8.615850e-47
Msa0790510	Msa1197410	0.827193	1.791253e-54	-8.615850e-47
Msa0816700	Msa1197410	0.807510	4.881084e-50	-8.615850e-47
Msa0820850	Msa1197410	0.814693	1.353210e-51	-8.615850e-47
Msa0827040	Msa1197410	0.800862	1.181194e-48	-8.615850e-47
Msa0830530	Msa1197410	0.814118	1.812849e-51	-8.615850e-47
Msa0840820	Msa1197410	0.801005	1.104263e-48	-8.615850e-47
Msa0149900	Msa1197410	0.801567	8.473673e-49	-8.615850e-47
Msa0150820	Msa1197410	0.809894	1.510256e-50	-8.615850e-47
Msa0159180	Msa1197410	0.811885	5.596727e-51	-8.615850e-47
Msa0160550	Msa1197410	0.814818	1.269114e-51	-8.615850e-47
Msa0166870	Msa1197410	0.803555	3.296771e-49	-8.615850e-47
Msa0178930	Msa1197410	0.800243	1.578979e-48	-8.615850e-47
Msa0188630	Msa1197410	0.813612	2.344148e-51	-8.615850e-47
Msa0188830	Msa1197410	0.830681	2.561118e-55	-8.615850e-47
Msa0217680	Msa1197410	0.806270	8.923090e-50	-8.615850e-47
Msa0220580	Msa1197410	0.814915	1.207868e-51	-8.615850e-47
Msa0222890	Msa1197410	0.821164	4.669657e-53	-8.615850e-47
Msa0223010	Msa1197410	0.818071	2.373848e-52	-8.615850e-47
Msa0373930	Msa1197410	0.801881	7.302470e-49	-8.615850e-47
Msa0376590	Msa1197410	0.811054	8.483370e-51	-8.615850e-47
Msa0379640	Msa1197410	0.812183	4.820235e-51	-8.615850e-47
Msa0404030	Msa1197410	0.804970	1.673068e-49	-8.615850e-47
Msa0412840	Msa1197410	0.809976	1.449925e-50	-8.615850e-47
Msa0425790	Msa1197410	0.820989	5.125314e-53	-8.615850e-47
Msa0426900	Msa1197410	0.819176	1.332780e-52	-8.615850e-47
Msa0436760	Msa1197410	0.813227	2.848570e-51	-8.615850e-47
Msa0440750	Msa1197410	0.806818	6.837564e-50	-8.615850e-47
Msa0442200	Msa1197410	0.828235	1.006172e-54	-8.615850e-47
Msa0443920	Msa1197410	0.809419	1.909578e-50	-8.615850e-47
Msa0453200	Msa1197410	0.800921	1.148583e-48	-8.615850e-47
Msa0468130	Msa1197410	0.800108	1.682549e-48	-8.615850e-47
Msa0471900	Msa1197410	0.802191	6.308286e-49	-8.615850e-47
Msa0477080	Msa1197410	0.810562	1.083865e-50	-8.615850e-47
Msa0479970	Msa1197410	0.828909	6.918443e-55	-8.615850e-47
Msa0480000	Msa1197410	0.800652	1.303658e-48	-8.615850e-47
Msa0982270	Msa1197410	0.804648	1.952754e-49	-8.615850e-47
Msa0992490	Msa1197410	-0.800052	1.726817e-48	-8.615850e-47
Msa0999100	Msa1197410	0.803138	4.022947e-49	-8.615850e-47
Msa1003620	Msa1197410	0.800600	1.335717e-48	-8.615850e-47
Msa1012830	Msa1197410	0.822615	2.154279e-53	-8.615850e-47
Msa1014540	Msa1197410	0.815702	8.074983e-52	-8.615850e-47
Msa1021540	Msa1197410	0.801071	1.070578e-48	-8.615850e-47
Msa1023920	Msa1197410	0.811385	7.190602e-51	-8.615850e-47
Msa1046020	Msa1197410	0.800012	1.759890e-48	-8.615850e-47
Msa1046060	Msa1197410	0.809250	2.076353e-50	-8.615850e-47
Msa1051200	Msa1197410	0.801346	9.403927e-49	-8.615850e-47
Msa1063510	Msa1197410	0.808103	3.649736e-50	-8.615850e-47
Msa1075220	Msa1197410	-0.805593	1.238462e-49	-8.615850e-47
Msa1082500	Msa1197410	0.833495	5.160453e-56	-8.615850e-47
Msa1090260	Msa1197410	0.815931	7.176951e-52	-8.615850e-47
Msa0245310	Msa1197410	0.814400	1.571005e-51	-8.615850e-47
Msa0255080	Msa1197410	0.819347	1.218197e-52	-8.615850e-47
Msa0259370	Msa1197410	0.818188	2.232530e-52	-8.615850e-47
Msa0260680	Msa1197410	0.804375	2.226952e-49	-8.615850e-47
Msa0265380	Msa1197410	0.815124	1.085858e-51	-8.615850e-47
Msa0270100	Msa1197410	0.832231	1.063430e-55	-8.615850e-47
Msa0270270	Msa1197410	0.818586	1.813979e-52	-8.615850e-47
Msa0280090	Msa1197410	0.804078	2.566836e-49	-8.615850e-47
Msa0282250	Msa1197410	0.804660	1.941504e-49	-8.615850e-47
Msa0287650	Msa1197410	0.803949	2.730279e-49	-8.615850e-47
Msa0303360	Msa1197410	0.805413	1.351275e-49	-8.615850e-47
Msa0309770	Msa1197410	0.821936	3.097289e-53	-8.615850e-47
Msa0316240	Msa1197410	0.801495	8.765649e-49	-8.615850e-47
Msa0319170	Msa1197410	0.822949	1.801536e-53	-8.615850e-47
Msa0333030	Msa1197410	0.817693	2.889498e-52	-8.615850e-47
Msa0336420	Msa1197410	0.838112	3.489334e-57	-8.615850e-47
Msa0337620	Msa1197410	0.807253	5.532912e-50	-8.615850e-47
Msa0339620	Msa1197410	0.818503	1.894835e-52	-8.615850e-47
Msa0345970	Msa1197410	0.809813	1.571731e-50	-8.615850e-47
Msa1107900	Msa1197410	0.804701	1.903463e-49	-8.615850e-47
Msa1116130	Msa1197410	-0.815808	7.648031e-52	-8.615850e-47
Msa1127650	Msa1197410	0.801538	8.589502e-49	-8.615850e-47
Msa1131220	Msa1197410	0.817873	2.630196e-52	-8.615850e-47
Msa1143930	Msa1197410	-0.821714	3.485678e-53	-8.615850e-47
Msa1154280	Msa1197410	0.802108	6.559607e-49	-8.615850e-47
Msa1171870	Msa1197410	0.801903	7.228263e-49	-8.615850e-47
Msa1197410	Msa1201240	0.800429	1.447445e-48	-8.615850e-47
Msa1197410	Msa1203250	0.817767	2.780088e-52	-8.615850e-47
Msa1197410	Msa1214480	0.815675	8.188643e-52	-8.615850e-47
Msa1197410	Msa1217470	0.807674	4.503960e-50	-8.615850e-47
Msa1197410	Msa1233500	0.804350	2.253721e-49	-8.615850e-47
Msa1197410	Msa1233890	0.838043	3.634073e-57	-8.615850e-47
Msa1197410	Msa1240180	0.803643	3.161008e-49	-8.615850e-47
Msa1197410	Msa1250890	0.871516	6.441261e-67	-8.615850e-47
Msa1197410	Msa1253020	0.814426	1.550313e-51	-8.615850e-47
Msa1197410	Msa1259490	-0.812370	4.386749e-51	-8.615850e-47
Msa1197410	Msa1279210	0.818801	1.621426e-52	-8.615850e-47
Msa1197410	Msa1281510	0.802789	4.748719e-49	-8.615850e-47
Msa1197410	Msa1291660	0.804509	2.087314e-49	-8.615850e-47
Msa1197410	Msa1299180	-0.803782	2.957337e-49	-8.615850e-47
Msa1197410	Msa1302190	-0.819250	1.281625e-52	-8.615850e-47
Msa1197410	Msa1305190	0.813767	2.166740e-51	-8.615850e-47
Msa1197410	Msa1305340	0.826975	2.019780e-54	-8.615850e-47
Msa1197410	Msa1306430	0.804595	2.003621e-49	-8.615850e-47
Msa1197410	Msa1306840	0.827963	1.170184e-54	-8.615850e-47
Msa1197410	Msa1306920	0.801580	8.420064e-49	-8.615850e-47
Msa1197410	Msa1314340	0.835050	2.102716e-56	-8.615850e-47
Msa1197410	Msa1322190	0.803903	2.791134e-49	-8.615850e-47
Msa1197410	Msa1327550	0.828264	9.902874e-55	-8.615850e-47
Msa1197410	Msa1333410	0.815041	1.132641e-51	-8.615850e-47
Msa1197410	Msa1340650	0.811796	5.851444e-51	-8.615850e-47
Msa1197410	Msa1348490	0.807935	3.963638e-50	-8.615850e-47
Msa1197410	Msa1351620	0.804439	2.159623e-49	-8.615850e-47
Msa1197410	Msa1351730	0.812726	3.667468e-51	-8.615850e-47
Msa1197410	Msa1353980	0.806699	7.247638e-50	-8.615850e-47
Msa1197410	Msa1357530	0.810531	1.100382e-50	-8.615850e-47
Msa1197410	Msa1359040	0.824990	5.981071e-54	-8.615850e-47
Msa1197410	Msa1385670	0.804704	1.901435e-49	-8.615850e-47
Msa1197410	Msa1386780	0.803941	2.740765e-49	-8.615850e-47
Msa1197410	Msa1390050	0.803107	4.081064e-49	-8.615850e-47
Msa1197410	Msa1392260	0.835057	2.093865e-56	-8.615850e-47
Msa1197410	Msa1393040	0.800745	1.247713e-48	-8.615850e-47
Msa1197410	Msa1397120	0.801570	8.461132e-49	-8.615850e-47
Msa1197410	Msa1401290	0.802909	4.486014e-49	-8.615850e-47
Msa1197410	Msa1403340	0.805087	1.580980e-49	-8.615850e-47
Msa1197410	Msa1410100	0.807137	5.854997e-50	-8.615850e-47
Msa1197410	Msa1411020	0.803892	2.806332e-49	-8.615850e-47
Msa1197410	Msa1419960	0.800405	1.463830e-48	-8.615850e-47
Msa1197410	Msa1424450	0.802934	4.433003e-49	-8.615850e-47
Msa1197410	Msa1426030	0.821973	3.037195e-53	-8.615850e-47
Msa1197410	Msa1427230	0.838739	2.404475e-57	-8.615850e-47
Msa1197410	Msa1429900	0.827657	1.386176e-54	-8.615850e-47
Msa1197410	Msa1430680	0.815838	7.528286e-52	-8.615850e-47
Msa1197410	Msa1434350	0.800836	1.195710e-48	-8.615850e-47
Msa1197410	Msa1435370	0.819851	9.347430e-53	-8.615850e-47
Msa1197410	Msa1439320	0.803247	3.818315e-49	-8.615850e-47
Msa1197410	Msa1440000	0.818065	2.380655e-52	-8.615850e-47
Msa1197410	Msa1440910	0.813880	2.046092e-51	-8.615850e-47
Msa1197410	Msa1443850	0.820773	5.745472e-53	-8.615850e-47
Msa1197410	Msa1444740	0.802402	5.706468e-49	-8.615850e-47
Msa1197410	Msa1449820	0.810286	1.243065e-50	-8.615850e-47
Msa1197410	Msa1451620	-0.810828	9.491038e-51	-8.615850e-47
Msa1197410	Msa1460830	0.831313	1.791638e-55	-8.615850e-47
Msa1197410	Msa1462840	0.808499	3.005751e-50	-8.615850e-47
Msa1197410	Msa1466540	0.801196	1.009249e-48	-8.615850e-47
Msa0484780	Msa1197410	0.834898	2.295717e-56	-8.615850e-47
Msa0501450	Msa1197410	0.814209	1.731081e-51	-8.615850e-47
Msa0516370	Msa1197410	0.801316	9.537870e-49	-8.615850e-47
Msa0536220	Msa1197410	0.801323	9.505719e-49	-8.615850e-47
Msa0545700	Msa1197410	0.801833	7.471397e-49	-8.615850e-47
Msa0555020	Msa1197410	0.813145	2.967799e-51	-8.615850e-47
Msa0555450	Msa1197410	0.800648	1.306216e-48	-8.615850e-47
Msa0558690	Msa1197410	0.803840	2.877045e-49	-8.615850e-47
Msa0562440	Msa1197410	0.815606	8.480471e-52	-8.615850e-47
Msa0563840	Msa1197410	0.805124	1.553467e-49	-8.615850e-47
Msa0577500	Msa1197410	0.830717	2.509514e-55	-8.615850e-47
Msa0861130	Msa1197410	0.811465	6.906603e-51	-8.615850e-47
Msa0864250	Msa1197410	0.801468	8.878603e-49	-8.615850e-47
Msa0909110	Msa1197410	0.805227	1.477836e-49	-8.615850e-47
Msa0938220	Msa1197410	0.802197	6.290591e-49	-8.615850e-47
Msa0947660	Msa1197410	0.810762	9.812670e-51	-8.615850e-47
Msa0968680	Msa1197410	0.832730	8.001540e-56	-8.615850e-47
Msa0969520	Msa1197410	0.814724	1.331399e-51	-8.615850e-47
Msa0969810	Msa1197410	0.801071	1.070599e-48	-8.615850e-47
Msa0978250	Msa1197410	0.800490	1.406172e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1197410	MtrunA17_Chr8g0366111	94.690	113	6	0	24	136	246	358	5.94e-74	224

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1197410	AT2G03800.1	69.565	115	31	1	25	135	202	316	1.79e-54	173
Msa1197410	AT2G03800.2	69.565	115	31	1	25	135	246	360	3.12e-54	174

Find 46 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCTTCTCCCTCTTCTTTA+AGG	0.099613	8_1:-47733263	Msa1197410:CDS
TCTACATTTGTTTCTCCTTT+TGG	0.150136	8_1:+47731631	None:intergenic
TGGGTTGGTCACCTACTTTC+TGG	0.174476	8_1:-47731676	Msa1197410:CDS
AACACTCAATAAAAGTAATT+TGG	0.197331	8_1:+47731223	None:intergenic
CATACATTTATTATCAATAT+AGG	0.230949	8_1:+47730921	None:intergenic
TATGTTCCTATGTATTTATT+TGG	0.233322	8_1:-47730954	Msa1197410:three_prime_UTR
ACGGAGCAGAATATTAAAAT+TGG	0.260579	8_1:-47731250	Msa1197410:CDS
AATATAGGAAAGATGATGTT+TGG	0.316445	8_1:-47731696	Msa1197410:intron
TCACCTACTTTCTGGATATT+CGG	0.318220	8_1:-47731668	Msa1197410:CDS
ATACATTTATTATCAATATA+GGG	0.327488	8_1:+47730922	None:intergenic
GATAAGAAGAAAGTCCTTCT+TGG	0.358937	8_1:-47732123	Msa1197410:CDS
CTCCCTCTTCTTTAAGGAAA+GGG	0.375889	8_1:-47733257	Msa1197410:CDS
GGAGAAACAAATGTAGAGAT+TGG	0.379058	8_1:-47731625	Msa1197410:CDS
ACATTATGTGCCTCGGCATA+TGG	0.407678	8_1:-47732088	Msa1197410:CDS
AATTTACTGCAGGAGTTTCA+AGG	0.417491	8_1:-47731305	Msa1197410:intron
ATAAGAAGAAAGTCCTTCTT+GGG	0.451631	8_1:-47732122	Msa1197410:CDS
TTATTGAGTGTTGATTTAAG+AGG	0.465194	8_1:-47731212	Msa1197410:exon
TTCTGGATATTCGGTGCCAA+TGG	0.497093	8_1:-47731659	Msa1197410:CDS
TTCCCTTTCCTTAAAGAAGA+GGG	0.503208	8_1:+47733255	None:intergenic
ATGTAGAGATTGGAGGAACT+TGG	0.504571	8_1:-47731615	Msa1197410:CDS
ATATAGGAAAGATGATGTTT+GGG	0.508580	8_1:-47731695	Msa1197410:intron
TCTCCCTCTTCTTTAAGGAA+AGG	0.508950	8_1:-47733258	Msa1197410:CDS
GTCCTTCTTGGGATAGGCGG+TGG	0.509514	8_1:-47732111	Msa1197410:CDS
ATTTACTGCAGGAGTTTCAA+GGG	0.511764	8_1:-47731304	Msa1197410:intron
TGGCAGAAGAATGCCATCAC+AGG	0.525499	8_1:-47731280	Msa1197410:CDS
TGCGCAATAATTTCGCCACC+AGG	0.526598	8_1:+47731547	None:intergenic
AGGAAAGATGATGTTTGGGT+TGG	0.533495	8_1:-47731691	Msa1197410:CDS
AAGAAAGTCCTTCTTGGGAT+AGG	0.543921	8_1:-47732117	Msa1197410:CDS
ACTGCAGGAGTTTCAAGGGC+TGG	0.545446	8_1:-47731300	Msa1197410:intron
GAAACAAATGTAGAGATTGG+AGG	0.558298	8_1:-47731622	Msa1197410:CDS
CTCCGTGAGGAATCCTGTGA+TGG	0.563242	8_1:+47731267	None:intergenic
AATTCGCCAAATAAATACAT+AGG	0.564283	8_1:+47730948	None:intergenic
ATTCCCTTTCCTTAAAGAAG+AGG	0.567548	8_1:+47733254	None:intergenic
ACTAACTGCAGGATTTCAGA+AGG	0.571436	8_1:+47733222	None:intergenic
GCACCGAATATCCAGAAAGT+AGG	0.580008	8_1:+47731665	None:intergenic
GTGCCAATGGAAGATCCAAA+AGG	0.584393	8_1:-47731646	Msa1197410:CDS
GTCTATAAAAGCTGCATACG+AGG	0.587763	8_1:-47731587	Msa1197410:CDS
CTGATAATGCAGCCATGGTG+AGG	0.589998	8_1:-47733290	None:intergenic
GCGGTGGACATTATGTGCCT+CGG	0.594821	8_1:-47732095	Msa1197410:CDS
AATGTGCAGATTGCAGACAT+AGG	0.599856	8_1:-47731171	Msa1197410:three_prime_UTR
TTATTGCGCATCTTGACCAA+AGG	0.621535	8_1:-47731534	Msa1197410:intron
GTCCACCGCCTATCCCAAGA+AGG	0.624058	8_1:+47732109	None:intergenic
TGCCATCACAGGATTCCTCA+CGG	0.636856	8_1:-47731269	Msa1197410:CDS
AAAGTCCTTCTTGGGATAGG+CGG	0.642444	8_1:-47732114	Msa1197410:CDS
AACACTACATCCATATGCCG+AGG	0.663300	8_1:+47732078	None:intergenic
AGAAGAGAGAAGCCTCACCA+TGG	0.684856	8_1:+47733278	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAAAAGAAAAATAAAAC+GGG	+	chr8_1:47731401-47731420	None:intergenic	10.0%
!!!	AAGTTAATTTTTTTTATTCA+AGG	+	chr8_1:47732423-47732442	None:intergenic	10.0%
!!!	GTTTGATATATATATTTTTT+TGG	-	chr8_1:47732755-47732774	Msa1197410:intron	10.0%
!!!	TTTTAGATATTTTTAATAGA+AGG	-	chr8_1:47733082-47733101	Msa1197410:intron	10.0%
!!	ATACATTTATTATCAATATA+GGG	+	chr8_1:47733238-47733257	None:intergenic	10.0%
!!	ATAAAAAAGAAAAATAAAAC+GGG	+	chr8_1:47731401-47731420	None:intergenic	10.0%
!!!	AAGTTAATTTTTTTTATTCA+AGG	+	chr8_1:47732423-47732442	None:intergenic	10.0%
!!!	GTTTGATATATATATTTTTT+TGG	-	chr8_1:47732755-47732774	Msa1197410:intron	10.0%
!!!	TTTTAGATATTTTTAATAGA+AGG	-	chr8_1:47733082-47733101	Msa1197410:intron	10.0%
!!	ATACATTTATTATCAATATA+GGG	+	chr8_1:47733238-47733257	None:intergenic	10.0%
!!!	CCTTAACTTAAATTATTTTT+GGG	-	chr8_1:47731359-47731378	Msa1197410:intron	15.0%
!!	CATTGATAAAAAATTTAACT+TGG	+	chr8_1:47731904-47731923	None:intergenic	15.0%
!!!	TTCTATTAGAAATAATTTTC+AGG	-	chr8_1:47733155-47733174	Msa1197410:intron	15.0%
!!	CATACATTTATTATCAATAT+AGG	+	chr8_1:47733239-47733258	None:intergenic	15.0%
!!!	CCTTAACTTAAATTATTTTT+GGG	-	chr8_1:47731359-47731378	Msa1197410:intron	15.0%
!!	CATTGATAAAAAATTTAACT+TGG	+	chr8_1:47731904-47731923	None:intergenic	15.0%
!!!	TTCTATTAGAAATAATTTTC+AGG	-	chr8_1:47733155-47733174	Msa1197410:intron	15.0%
!!	CATACATTTATTATCAATAT+AGG	+	chr8_1:47733239-47733258	None:intergenic	15.0%
!!!	GCCTTAACTTAAATTATTTT+TGG	-	chr8_1:47731358-47731377	Msa1197410:intron	20.0%
!!!	CCCAAAAATAATTTAAGTTA+AGG	+	chr8_1:47731362-47731381	None:intergenic	20.0%
!!	TTATTTATAAATACCATGTC+AGG	-	chr8_1:47731429-47731448	Msa1197410:intron	20.0%
!!	TTCTATAATGAAAAATGAGA+AGG	+	chr8_1:47731858-47731877	None:intergenic	20.0%
!!!	TTAAAGTTTCCTTCTAAAAT+CGG	-	chr8_1:47731959-47731978	Msa1197410:intron	20.0%
!!	ATTATGGGAATAAATTACAT+TGG	-	chr8_1:47732179-47732198	Msa1197410:intron	20.0%
!!!	TTTTTTTATTCAAGGTAACA+AGG	+	chr8_1:47732415-47732434	None:intergenic	20.0%
!!	AACACTCAATAAAAGTAATT+TGG	+	chr8_1:47732937-47732956	None:intergenic	20.0%
!!	TATGTTCCTATGTATTTATT+TGG	-	chr8_1:47733203-47733222	Msa1197410:intron	20.0%
!!!	GCCTTAACTTAAATTATTTT+TGG	-	chr8_1:47731358-47731377	Msa1197410:intron	20.0%
!!!	CCCAAAAATAATTTAAGTTA+AGG	+	chr8_1:47731362-47731381	None:intergenic	20.0%
!!	TTATTTATAAATACCATGTC+AGG	-	chr8_1:47731429-47731448	Msa1197410:intron	20.0%
!!	TTCTATAATGAAAAATGAGA+AGG	+	chr8_1:47731858-47731877	None:intergenic	20.0%
!!!	TTAAAGTTTCCTTCTAAAAT+CGG	-	chr8_1:47731959-47731978	Msa1197410:intron	20.0%
!!	ATTATGGGAATAAATTACAT+TGG	-	chr8_1:47732179-47732198	Msa1197410:intron	20.0%
!!!	TTTTTTTATTCAAGGTAACA+AGG	+	chr8_1:47732415-47732434	None:intergenic	20.0%
!!	AACACTCAATAAAAGTAATT+TGG	+	chr8_1:47732937-47732956	None:intergenic	20.0%
!!	TATGTTCCTATGTATTTATT+TGG	-	chr8_1:47733203-47733222	Msa1197410:intron	20.0%
!	TTTGAAAAATTTCACTGAGA+AGG	+	chr8_1:47731034-47731053	None:intergenic	25.0%
!!	TTTAAGTTAAGGCTGAATAA+AGG	+	chr8_1:47731351-47731370	None:intergenic	25.0%
!!!	CTTAAATTATTTTTGGGACT+TGG	-	chr8_1:47731365-47731384	Msa1197410:intron	25.0%
!	AAAAGAAAAATAAAACGGGA+AGG	+	chr8_1:47731397-47731416	None:intergenic	25.0%
!	AGTACACAGAAAATTATGTT+AGG	+	chr8_1:47731522-47731541	None:intergenic	25.0%
!	CTGAATTGCATATATGTAAT+TGG	-	chr8_1:47731623-47731642	Msa1197410:CDS	25.0%
!	AATGAACCAAACCTAAATAT+TGG	+	chr8_1:47731932-47731951	None:intergenic	25.0%
!!!	AAATTTTCACCGATTTTAGA+AGG	+	chr8_1:47731971-47731990	None:intergenic	25.0%
!	CAATTATAAAGTCACTGAAA+TGG	+	chr8_1:47732113-47732132	None:intergenic	25.0%
!!	TGAATTTTCTGATTGATGAA+AGG	-	chr8_1:47732131-47732150	Msa1197410:CDS	25.0%
!!	GAATTTTCTGATTGATGAAA+GGG	-	chr8_1:47732132-47732151	Msa1197410:CDS	25.0%
!	TGCACACTTAAATAGATTAT+GGG	-	chr8_1:47732164-47732183	Msa1197410:intron	25.0%
!	AATTACATTGGTGAAAAACA+TGG	-	chr8_1:47732191-47732210	Msa1197410:intron	25.0%
!	ATTACATTGGTGAAAAACAT+GGG	-	chr8_1:47732192-47732211	Msa1197410:intron	25.0%
!	GAACTCAAGAGTAAAAAAAA+AGG	+	chr8_1:47732330-47732349	None:intergenic	25.0%
!	AATATAGGAAAGATGATGTT+TGG	-	chr8_1:47732461-47732480	Msa1197410:intron	25.0%
!	ATATAGGAAAGATGATGTTT+GGG	-	chr8_1:47732462-47732481	Msa1197410:intron	25.0%
!	GATTACATTAAACTTACCTT+TGG	+	chr8_1:47732642-47732661	None:intergenic	25.0%
!!	TACGATTTGAAACTGATAAT+AGG	-	chr8_1:47732786-47732805	Msa1197410:intron	25.0%
!!!	TTTACTCTAAAATTTACTGC+AGG	-	chr8_1:47732842-47732861	Msa1197410:intron	25.0%
!!!	TTATTGAGTGTTGATTTAAG+AGG	-	chr8_1:47732945-47732964	Msa1197410:intron	25.0%
!!!	AATCACTTTTAATGCAAATC+TGG	+	chr8_1:47733033-47733052	None:intergenic	25.0%
!	AATTCGCCAAATAAATACAT+AGG	+	chr8_1:47733212-47733231	None:intergenic	25.0%
!	TTTGAAAAATTTCACTGAGA+AGG	+	chr8_1:47731034-47731053	None:intergenic	25.0%
!!	TTTAAGTTAAGGCTGAATAA+AGG	+	chr8_1:47731351-47731370	None:intergenic	25.0%
!!!	CTTAAATTATTTTTGGGACT+TGG	-	chr8_1:47731365-47731384	Msa1197410:intron	25.0%
!	AAAAGAAAAATAAAACGGGA+AGG	+	chr8_1:47731397-47731416	None:intergenic	25.0%
!	AGTACACAGAAAATTATGTT+AGG	+	chr8_1:47731522-47731541	None:intergenic	25.0%
!	CTGAATTGCATATATGTAAT+TGG	-	chr8_1:47731623-47731642	Msa1197410:CDS	25.0%
!	AATGAACCAAACCTAAATAT+TGG	+	chr8_1:47731932-47731951	None:intergenic	25.0%
!!!	AAATTTTCACCGATTTTAGA+AGG	+	chr8_1:47731971-47731990	None:intergenic	25.0%
!	CAATTATAAAGTCACTGAAA+TGG	+	chr8_1:47732113-47732132	None:intergenic	25.0%
!!	TGAATTTTCTGATTGATGAA+AGG	-	chr8_1:47732131-47732150	Msa1197410:CDS	25.0%
!!	GAATTTTCTGATTGATGAAA+GGG	-	chr8_1:47732132-47732151	Msa1197410:CDS	25.0%
!	TGCACACTTAAATAGATTAT+GGG	-	chr8_1:47732164-47732183	Msa1197410:intron	25.0%
!	AATTACATTGGTGAAAAACA+TGG	-	chr8_1:47732191-47732210	Msa1197410:intron	25.0%
!	ATTACATTGGTGAAAAACAT+GGG	-	chr8_1:47732192-47732211	Msa1197410:intron	25.0%
!	GAACTCAAGAGTAAAAAAAA+AGG	+	chr8_1:47732330-47732349	None:intergenic	25.0%
!	AATATAGGAAAGATGATGTT+TGG	-	chr8_1:47732461-47732480	Msa1197410:intron	25.0%
!	ATATAGGAAAGATGATGTTT+GGG	-	chr8_1:47732462-47732481	Msa1197410:intron	25.0%
!	GATTACATTAAACTTACCTT+TGG	+	chr8_1:47732642-47732661	None:intergenic	25.0%
!!	TACGATTTGAAACTGATAAT+AGG	-	chr8_1:47732786-47732805	Msa1197410:intron	25.0%
!!!	TTTACTCTAAAATTTACTGC+AGG	-	chr8_1:47732842-47732861	Msa1197410:intron	25.0%
!!!	TTATTGAGTGTTGATTTAAG+AGG	-	chr8_1:47732945-47732964	Msa1197410:intron	25.0%
!!!	AATCACTTTTAATGCAAATC+TGG	+	chr8_1:47733033-47733052	None:intergenic	25.0%
!	AATTCGCCAAATAAATACAT+AGG	+	chr8_1:47733212-47733231	None:intergenic	25.0%
!	TTCAATCTGTTTCTTCTTCT+TGG	-	chr8_1:47731146-47731165	Msa1197410:three_prime_UTR	30.0%
	TTTCTTCTTCTTGGATAACT+AGG	-	chr8_1:47731155-47731174	Msa1197410:three_prime_UTR	30.0%
	TAGCAAATTAATCAGACACT+TGG	-	chr8_1:47731193-47731212	Msa1197410:three_prime_UTR	30.0%
	TCTCTCTTATGTCTGAAAAA+TGG	-	chr8_1:47731312-47731331	Msa1197410:intron	30.0%
	ATGCATGAAGGAATAATATG+AGG	+	chr8_1:47731581-47731600	None:intergenic	30.0%
!	CATGATTTTTGAATGCATGA+AGG	+	chr8_1:47731593-47731612	None:intergenic	30.0%
	ATATGCAATTCAGAAAGCTT+AGG	+	chr8_1:47731616-47731635	None:intergenic	30.0%
	ATAAGAAGAAAGTCCTTCTT+GGG	-	chr8_1:47732035-47732054	Msa1197410:intron	30.0%
	CTGCACACTTAAATAGATTA+TGG	-	chr8_1:47732163-47732182	Msa1197410:intron	30.0%
!!!	TGCTTTGCTTTTTGCAATAT+AGG	-	chr8_1:47732446-47732465	Msa1197410:intron	30.0%
!!	TCTACATTTGTTTCTCCTTT+TGG	+	chr8_1:47732529-47732548	None:intergenic	30.0%
	ACGGAGCAGAATATTAAAAT+TGG	-	chr8_1:47732907-47732926	Msa1197410:intron	30.0%
!	TTCAATCTGTTTCTTCTTCT+TGG	-	chr8_1:47731146-47731165	Msa1197410:three_prime_UTR	30.0%
	TTTCTTCTTCTTGGATAACT+AGG	-	chr8_1:47731155-47731174	Msa1197410:three_prime_UTR	30.0%
	TAGCAAATTAATCAGACACT+TGG	-	chr8_1:47731193-47731212	Msa1197410:three_prime_UTR	30.0%
	TCTCTCTTATGTCTGAAAAA+TGG	-	chr8_1:47731312-47731331	Msa1197410:intron	30.0%
	ATGCATGAAGGAATAATATG+AGG	+	chr8_1:47731581-47731600	None:intergenic	30.0%
!	CATGATTTTTGAATGCATGA+AGG	+	chr8_1:47731593-47731612	None:intergenic	30.0%
	ATATGCAATTCAGAAAGCTT+AGG	+	chr8_1:47731616-47731635	None:intergenic	30.0%
	ATAAGAAGAAAGTCCTTCTT+GGG	-	chr8_1:47732035-47732054	Msa1197410:intron	30.0%
	CTGCACACTTAAATAGATTA+TGG	-	chr8_1:47732163-47732182	Msa1197410:intron	30.0%
!!!	TGCTTTGCTTTTTGCAATAT+AGG	-	chr8_1:47732446-47732465	Msa1197410:intron	30.0%
!!	TCTACATTTGTTTCTCCTTT+TGG	+	chr8_1:47732529-47732548	None:intergenic	30.0%
	ACGGAGCAGAATATTAAAAT+TGG	-	chr8_1:47732907-47732926	Msa1197410:intron	30.0%
	TTCCCTTTCCTTAAAGAAGA+GGG	+	chr8_1:47730905-47730924	None:intergenic	35.0%
	ATTCCCTTTCCTTAAAGAAG+AGG	+	chr8_1:47730906-47730925	None:intergenic	35.0%
	CTCATACTTAAACTAACTGC+AGG	+	chr8_1:47730949-47730968	None:intergenic	35.0%
!	CTGCAGTTAGTTTAAGTATG+AGG	-	chr8_1:47730947-47730966	Msa1197410:three_prime_UTR	35.0%
	ATTTCACTGAGAAGGATCAT+CGG	+	chr8_1:47731026-47731045	None:intergenic	35.0%
	AACTGCGCATAGTATTACAA+GGG	+	chr8_1:47731264-47731283	None:intergenic	35.0%
	TTTCAGACATAAGAGAGAAG+AGG	+	chr8_1:47731310-47731329	None:intergenic	35.0%
	AAGTTAAGGCTGAATAAAGG+AGG	+	chr8_1:47731348-47731367	None:intergenic	35.0%
	AGAAAAATAAAACGGGAAGG+AGG	+	chr8_1:47731394-47731413	None:intergenic	35.0%
	GTTTCATCATAAACCTGACA+TGG	+	chr8_1:47731445-47731464	None:intergenic	35.0%
	TCTAGCTATGTCATTGCTAA+TGG	+	chr8_1:47731467-47731486	None:intergenic	35.0%
	AGTTGTGAACTTGTGATTGA+CGG	-	chr8_1:47731546-47731565	Msa1197410:CDS	35.0%
	GATTGTGAGATTGCACTTAT+AGG	-	chr8_1:47731650-47731669	Msa1197410:CDS	35.0%
	TTGCTTACAGTGAGACTATT+TGG	-	chr8_1:47731799-47731818	Msa1197410:intron	35.0%
	TCAATGCAGAGCCAATATTT+AGG	-	chr8_1:47731918-47731937	Msa1197410:intron	35.0%
	GATAAGAAGAAAGTCCTTCT+TGG	-	chr8_1:47732034-47732053	Msa1197410:intron	35.0%
	TCACCTACTTTCTGGATATT+CGG	-	chr8_1:47732489-47732508	Msa1197410:intron	35.0%
	GGAGAAACAAATGTAGAGAT+TGG	-	chr8_1:47732532-47732551	Msa1197410:intron	35.0%
	GAAACAAATGTAGAGATTGG+AGG	-	chr8_1:47732535-47732554	Msa1197410:intron	35.0%
	AATTTACTGCAGGAGTTTCA+AGG	-	chr8_1:47732852-47732871	Msa1197410:intron	35.0%
	ATTTACTGCAGGAGTTTCAA+GGG	-	chr8_1:47732853-47732872	Msa1197410:intron	35.0%
!	TTTTAATATTCTGCTCCGTG+AGG	+	chr8_1:47732906-47732925	None:intergenic	35.0%
!!	TAATTTTCAGGCGCTTTAGA+AGG	-	chr8_1:47733167-47733186	Msa1197410:intron	35.0%
	TTCCCTTTCCTTAAAGAAGA+GGG	+	chr8_1:47730905-47730924	None:intergenic	35.0%
	ATTCCCTTTCCTTAAAGAAG+AGG	+	chr8_1:47730906-47730925	None:intergenic	35.0%
	CTCATACTTAAACTAACTGC+AGG	+	chr8_1:47730949-47730968	None:intergenic	35.0%
!	CTGCAGTTAGTTTAAGTATG+AGG	-	chr8_1:47730947-47730966	Msa1197410:three_prime_UTR	35.0%
	ATTTCACTGAGAAGGATCAT+CGG	+	chr8_1:47731026-47731045	None:intergenic	35.0%
	AACTGCGCATAGTATTACAA+GGG	+	chr8_1:47731264-47731283	None:intergenic	35.0%
	TTTCAGACATAAGAGAGAAG+AGG	+	chr8_1:47731310-47731329	None:intergenic	35.0%
	AAGTTAAGGCTGAATAAAGG+AGG	+	chr8_1:47731348-47731367	None:intergenic	35.0%
	AGAAAAATAAAACGGGAAGG+AGG	+	chr8_1:47731394-47731413	None:intergenic	35.0%
	GTTTCATCATAAACCTGACA+TGG	+	chr8_1:47731445-47731464	None:intergenic	35.0%
	TCTAGCTATGTCATTGCTAA+TGG	+	chr8_1:47731467-47731486	None:intergenic	35.0%
	AGTTGTGAACTTGTGATTGA+CGG	-	chr8_1:47731546-47731565	Msa1197410:CDS	35.0%
	GATTGTGAGATTGCACTTAT+AGG	-	chr8_1:47731650-47731669	Msa1197410:CDS	35.0%
	TTGCTTACAGTGAGACTATT+TGG	-	chr8_1:47731799-47731818	Msa1197410:intron	35.0%
	TCAATGCAGAGCCAATATTT+AGG	-	chr8_1:47731918-47731937	Msa1197410:intron	35.0%
	GATAAGAAGAAAGTCCTTCT+TGG	-	chr8_1:47732034-47732053	Msa1197410:intron	35.0%
	TCACCTACTTTCTGGATATT+CGG	-	chr8_1:47732489-47732508	Msa1197410:intron	35.0%
	GGAGAAACAAATGTAGAGAT+TGG	-	chr8_1:47732532-47732551	Msa1197410:intron	35.0%
	GAAACAAATGTAGAGATTGG+AGG	-	chr8_1:47732535-47732554	Msa1197410:intron	35.0%
	AATTTACTGCAGGAGTTTCA+AGG	-	chr8_1:47732852-47732871	Msa1197410:intron	35.0%
	ATTTACTGCAGGAGTTTCAA+GGG	-	chr8_1:47732853-47732872	Msa1197410:intron	35.0%
!	TTTTAATATTCTGCTCCGTG+AGG	+	chr8_1:47732906-47732925	None:intergenic	35.0%
!!	TAATTTTCAGGCGCTTTAGA+AGG	-	chr8_1:47733167-47733186	Msa1197410:intron	35.0%
	TCTCTTCTCCCTCTTCTTTA+AGG	-	chr8_1:47730894-47730913	Msa1197410:three_prime_UTR	40.0%
!	TCTCCCTCTTCTTTAAGGAA+AGG	-	chr8_1:47730899-47730918	Msa1197410:three_prime_UTR	40.0%
!	CTCCCTCTTCTTTAAGGAAA+GGG	-	chr8_1:47730900-47730919	Msa1197410:three_prime_UTR	40.0%
	ACTAACTGCAGGATTTCAGA+AGG	+	chr8_1:47730938-47730957	None:intergenic	40.0%
	TTAAGTATGAGGCTCACACT+CGG	-	chr8_1:47730958-47730977	Msa1197410:three_prime_UTR	40.0%
!	TCGGCTTGCATGAAAATTCA+GGG	+	chr8_1:47731007-47731026	None:intergenic	40.0%
!!	ATCGGCTTGCATGAAAATTC+AGG	+	chr8_1:47731008-47731027	None:intergenic	40.0%
	TGAAGAATTGCTTCCTTGCT+AGG	-	chr8_1:47731216-47731235	Msa1197410:exon	40.0%
	CAACTGCGCATAGTATTACA+AGG	+	chr8_1:47731265-47731284	None:intergenic	40.0%
	AAGAGAGAAGAGGTTTGCAA+TGG	+	chr8_1:47731300-47731319	None:intergenic	40.0%
	GTTGTGAACTTGTGATTGAC+GGG	-	chr8_1:47731547-47731566	Msa1197410:CDS	40.0%
!!	AATGTCCCTTTTGAGCATTG+AGG	-	chr8_1:47731832-47731851	Msa1197410:intron	40.0%
!	GCAGAGCCAATATTTAGGTT+TGG	-	chr8_1:47731923-47731942	Msa1197410:intron	40.0%
	AAGAAAGTCCTTCTTGGGAT+AGG	-	chr8_1:47732040-47732059	Msa1197410:intron	40.0%
	CTCCACTGGAATGAAGATAA+AGG	-	chr8_1:47732222-47732241	Msa1197410:intron	40.0%
	CACCTTTATCTTCATTCCAG+TGG	+	chr8_1:47732227-47732246	None:intergenic	40.0%
	CACTGGAATGAAGATAAAGG+TGG	-	chr8_1:47732225-47732244	Msa1197410:intron	40.0%
	AGGAAAGATGATGTTTGGGT+TGG	-	chr8_1:47732466-47732485	Msa1197410:intron	40.0%
!	TCTCCTTTTGGATCTTCCAT+TGG	+	chr8_1:47732517-47732536	None:intergenic	40.0%
	ATGTAGAGATTGGAGGAACT+TGG	-	chr8_1:47732542-47732561	Msa1197410:intron	40.0%
	GTCTATAAAAGCTGCATACG+AGG	-	chr8_1:47732570-47732589	Msa1197410:intron	40.0%
!!	GCAACTAAATCTGCTTTTCC+TGG	-	chr8_1:47732592-47732611	Msa1197410:intron	40.0%
!!	ACTAAATCTGCTTTTCCTGG+TGG	-	chr8_1:47732595-47732614	Msa1197410:intron	40.0%
	TTATTGCGCATCTTGACCAA+AGG	-	chr8_1:47732623-47732642	Msa1197410:intron	40.0%
	AATGTGCAGATTGCAGACAT+AGG	-	chr8_1:47732986-47733005	Msa1197410:intron	40.0%
	TCTCTTCTCCCTCTTCTTTA+AGG	-	chr8_1:47730894-47730913	Msa1197410:three_prime_UTR	40.0%
!	TCTCCCTCTTCTTTAAGGAA+AGG	-	chr8_1:47730899-47730918	Msa1197410:three_prime_UTR	40.0%
!	CTCCCTCTTCTTTAAGGAAA+GGG	-	chr8_1:47730900-47730919	Msa1197410:three_prime_UTR	40.0%
	ACTAACTGCAGGATTTCAGA+AGG	+	chr8_1:47730938-47730957	None:intergenic	40.0%
	TTAAGTATGAGGCTCACACT+CGG	-	chr8_1:47730958-47730977	Msa1197410:three_prime_UTR	40.0%
!	TCGGCTTGCATGAAAATTCA+GGG	+	chr8_1:47731007-47731026	None:intergenic	40.0%
!!	ATCGGCTTGCATGAAAATTC+AGG	+	chr8_1:47731008-47731027	None:intergenic	40.0%
	TGAAGAATTGCTTCCTTGCT+AGG	-	chr8_1:47731216-47731235	Msa1197410:exon	40.0%
	CAACTGCGCATAGTATTACA+AGG	+	chr8_1:47731265-47731284	None:intergenic	40.0%
	AAGAGAGAAGAGGTTTGCAA+TGG	+	chr8_1:47731300-47731319	None:intergenic	40.0%
	GTTGTGAACTTGTGATTGAC+GGG	-	chr8_1:47731547-47731566	Msa1197410:CDS	40.0%
!!	AATGTCCCTTTTGAGCATTG+AGG	-	chr8_1:47731832-47731851	Msa1197410:intron	40.0%
!	GCAGAGCCAATATTTAGGTT+TGG	-	chr8_1:47731923-47731942	Msa1197410:intron	40.0%
	AAGAAAGTCCTTCTTGGGAT+AGG	-	chr8_1:47732040-47732059	Msa1197410:intron	40.0%
	CTCCACTGGAATGAAGATAA+AGG	-	chr8_1:47732222-47732241	Msa1197410:intron	40.0%
	CACCTTTATCTTCATTCCAG+TGG	+	chr8_1:47732227-47732246	None:intergenic	40.0%
	CACTGGAATGAAGATAAAGG+TGG	-	chr8_1:47732225-47732244	Msa1197410:intron	40.0%
	AGGAAAGATGATGTTTGGGT+TGG	-	chr8_1:47732466-47732485	Msa1197410:intron	40.0%
!	TCTCCTTTTGGATCTTCCAT+TGG	+	chr8_1:47732517-47732536	None:intergenic	40.0%
	ATGTAGAGATTGGAGGAACT+TGG	-	chr8_1:47732542-47732561	Msa1197410:intron	40.0%
	GTCTATAAAAGCTGCATACG+AGG	-	chr8_1:47732570-47732589	Msa1197410:intron	40.0%
!!	GCAACTAAATCTGCTTTTCC+TGG	-	chr8_1:47732592-47732611	Msa1197410:intron	40.0%
!!	ACTAAATCTGCTTTTCCTGG+TGG	-	chr8_1:47732595-47732614	Msa1197410:intron	40.0%
	TTATTGCGCATCTTGACCAA+AGG	-	chr8_1:47732623-47732642	Msa1197410:intron	40.0%
	AATGTGCAGATTGCAGACAT+AGG	-	chr8_1:47732986-47733005	Msa1197410:intron	40.0%
	CGGCTTGCATGAAAATTCAG+GGG	+	chr8_1:47731006-47731025	None:intergenic	45.0%
	GTAGCAGAAGCAGAAACAGA+AGG	+	chr8_1:47731126-47731145	None:intergenic	45.0%
	ACATACAGAGTCACCTAGCA+AGG	+	chr8_1:47731232-47731251	None:intergenic	45.0%
	GAAGGCCTCAATGCTCAAAA+GGG	+	chr8_1:47731840-47731859	None:intergenic	45.0%
	AGAAGGCCTCAATGCTCAAA+AGG	+	chr8_1:47731841-47731860	None:intergenic	45.0%
	ATTCTCACACTCTTCCTGCA+GGG	-	chr8_1:47732006-47732025	Msa1197410:intron	45.0%
	CTTCTTATCATTCTCCCTGC+AGG	+	chr8_1:47732023-47732042	None:intergenic	45.0%
	AAAGTCCTTCTTGGGATAGG+CGG	-	chr8_1:47732043-47732062	Msa1197410:intron	45.0%
	ACATTATGTGCCTCGGCATA+TGG	-	chr8_1:47732069-47732088	Msa1197410:intron	45.0%
	AACACTACATCCATATGCCG+AGG	+	chr8_1:47732082-47732101	None:intergenic	45.0%
	ACATGGGAGTTAAACTCCAC+TGG	-	chr8_1:47732208-47732227	Msa1197410:intron	45.0%
	GCACCGAATATCCAGAAAGT+AGG	+	chr8_1:47732495-47732514	None:intergenic	45.0%
!!	TTCTGGATATTCGGTGCCAA+TGG	-	chr8_1:47732498-47732517	Msa1197410:intron	45.0%
	GTGCCAATGGAAGATCCAAA+AGG	-	chr8_1:47732511-47732530	Msa1197410:intron	45.0%
	CGGCTTGCATGAAAATTCAG+GGG	+	chr8_1:47731006-47731025	None:intergenic	45.0%
	GTAGCAGAAGCAGAAACAGA+AGG	+	chr8_1:47731126-47731145	None:intergenic	45.0%
	ACATACAGAGTCACCTAGCA+AGG	+	chr8_1:47731232-47731251	None:intergenic	45.0%
	GAAGGCCTCAATGCTCAAAA+GGG	+	chr8_1:47731840-47731859	None:intergenic	45.0%
	AGAAGGCCTCAATGCTCAAA+AGG	+	chr8_1:47731841-47731860	None:intergenic	45.0%
	ATTCTCACACTCTTCCTGCA+GGG	-	chr8_1:47732006-47732025	Msa1197410:intron	45.0%
	CTTCTTATCATTCTCCCTGC+AGG	+	chr8_1:47732023-47732042	None:intergenic	45.0%
	AAAGTCCTTCTTGGGATAGG+CGG	-	chr8_1:47732043-47732062	Msa1197410:intron	45.0%
	ACATTATGTGCCTCGGCATA+TGG	-	chr8_1:47732069-47732088	Msa1197410:intron	45.0%
	AACACTACATCCATATGCCG+AGG	+	chr8_1:47732082-47732101	None:intergenic	45.0%
	ACATGGGAGTTAAACTCCAC+TGG	-	chr8_1:47732208-47732227	Msa1197410:intron	45.0%
	GCACCGAATATCCAGAAAGT+AGG	+	chr8_1:47732495-47732514	None:intergenic	45.0%
!!	TTCTGGATATTCGGTGCCAA+TGG	-	chr8_1:47732498-47732517	Msa1197410:intron	45.0%
	GTGCCAATGGAAGATCCAAA+AGG	-	chr8_1:47732511-47732530	Msa1197410:intron	45.0%
!!	TATAAAAAAGAAAAATAAAA+CGG	+	chr8_1:47731402-47731421	None:intergenic	5.0%
!!!	TTTGATATATATATTTTTTT+GGG	-	chr8_1:47732756-47732775	Msa1197410:intron	5.0%
!!	TATAAAAAAGAAAAATAAAA+CGG	+	chr8_1:47731402-47731421	None:intergenic	5.0%
!!!	TTTGATATATATATTTTTTT+GGG	-	chr8_1:47732756-47732775	Msa1197410:intron	5.0%
	GATTCTCACACTCTTCCTGC+AGG	-	chr8_1:47732005-47732024	Msa1197410:intron	50.0%
!!	TGGGTTGGTCACCTACTTTC+TGG	-	chr8_1:47732481-47732500	Msa1197410:intron	50.0%
	TGCGCAATAATTTCGCCACC+AGG	+	chr8_1:47732613-47732632	None:intergenic	50.0%
	TGGCAGAAGAATGCCATCAC+AGG	-	chr8_1:47732877-47732896	Msa1197410:intron	50.0%
	TGCCATCACAGGATTCCTCA+CGG	-	chr8_1:47732888-47732907	Msa1197410:intron	50.0%
	GATTCTCACACTCTTCCTGC+AGG	-	chr8_1:47732005-47732024	Msa1197410:intron	50.0%
!!	TGGGTTGGTCACCTACTTTC+TGG	-	chr8_1:47732481-47732500	Msa1197410:intron	50.0%
	TGCGCAATAATTTCGCCACC+AGG	+	chr8_1:47732613-47732632	None:intergenic	50.0%
	TGGCAGAAGAATGCCATCAC+AGG	-	chr8_1:47732877-47732896	Msa1197410:intron	50.0%
	TGCCATCACAGGATTCCTCA+CGG	-	chr8_1:47732888-47732907	Msa1197410:intron	50.0%
	GTATGAGGCTCACACTCGGA+AGG	-	chr8_1:47730962-47730981	Msa1197410:three_prime_UTR	55.0%
	GCGGTGGACATTATGTGCCT+CGG	-	chr8_1:47732062-47732081	Msa1197410:intron	55.0%
	ACTGCAGGAGTTTCAAGGGC+TGG	-	chr8_1:47732857-47732876	Msa1197410:intron	55.0%
	CTCCGTGAGGAATCCTGTGA+TGG	+	chr8_1:47732893-47732912	None:intergenic	55.0%
	GTATGAGGCTCACACTCGGA+AGG	-	chr8_1:47730962-47730981	Msa1197410:three_prime_UTR	55.0%
	GCGGTGGACATTATGTGCCT+CGG	-	chr8_1:47732062-47732081	Msa1197410:intron	55.0%
	ACTGCAGGAGTTTCAAGGGC+TGG	-	chr8_1:47732857-47732876	Msa1197410:intron	55.0%
	CTCCGTGAGGAATCCTGTGA+TGG	+	chr8_1:47732893-47732912	None:intergenic	55.0%
	GCTCTCTTCACACGTGCGCA+CGG	-	chr8_1:47731056-47731075	Msa1197410:three_prime_UTR	60.0%
	GTCCTTCTTGGGATAGGCGG+TGG	-	chr8_1:47732046-47732065	Msa1197410:intron	60.0%
	GTCCACCGCCTATCCCAAGA+AGG	+	chr8_1:47732051-47732070	None:intergenic	60.0%
	GCTCTCTTCACACGTGCGCA+CGG	-	chr8_1:47731056-47731075	Msa1197410:three_prime_UTR	60.0%
	GTCCTTCTTGGGATAGGCGG+TGG	-	chr8_1:47732046-47732065	Msa1197410:intron	60.0%
	GTCCACCGCCTATCCCAAGA+AGG	+	chr8_1:47732051-47732070	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_1	gene	47730881	47733298	47730881	ID=Msa1197410;Name=Msa1197410
chr8_1	mRNA	47730881	47733298	47730881	ID=Msa1197410-mRNA-1;Parent=Msa1197410;Name=Msa1197410-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0\|0.66\|0.75\|1\|1\|1\|4\|347\|136
chr8_1	exon	47730881	47731315	47730881	ID=Msa1197410-mRNA-1:exon:15177;Parent=Msa1197410-mRNA-1
chr8_1	exon	47731535	47731711	47731535	ID=Msa1197410-mRNA-1:exon:15176;Parent=Msa1197410-mRNA-1
chr8_1	exon	47732078	47732152	47732078	ID=Msa1197410-mRNA-1:exon:15175;Parent=Msa1197410-mRNA-1
chr8_1	exon	47733228	47733298	47733228	ID=Msa1197410-mRNA-1:exon:15174;Parent=Msa1197410-mRNA-1
chr8_1	CDS	47733228	47733298	47733228	ID=Msa1197410-mRNA-1:cds;Parent=Msa1197410-mRNA-1
chr8_1	CDS	47732078	47732152	47732078	ID=Msa1197410-mRNA-1:cds;Parent=Msa1197410-mRNA-1
chr8_1	CDS	47731535	47731711	47731535	ID=Msa1197410-mRNA-1:cds;Parent=Msa1197410-mRNA-1
chr8_1	CDS	47731228	47731315	47731228	ID=Msa1197410-mRNA-1:cds;Parent=Msa1197410-mRNA-1
chr8_1	three_prime_UTR	47730881	47731227	47730881	ID=Msa1197410-mRNA-1:three_prime_utr;Parent=Msa1197410-mRNA-1

Gene Sequence

>Msa1197410

ATGGTGAGGCTTCTCTCTTCTCCCTCTTCTTTAAGGAAAGGGAATCTGAGCTTTCCTTCTGAAATCCTGCAGGAGAATGATAAGAAGAAAGTCCTTCTTGGGATAGGCGGTGGACATTATGTGCCTCGGCATATGGATGTAGTGTTGAAAGATGATGTTTGGGTTGGTCACCTACTTTCTGGATATTCGGTGCCAATGGAAGATCCAAAAGGAGAAACAAATGTAGAGATTGGAGGAACTTGGAAACAGTCTATAAAAGCTGCATACGAGGCAACTAAATCTGCTTTTCCTGGTGGCGAAATTATTGCGCATCTTGACCAAAGGAGTTTCAAGGGCTGGCAGAAGAATGCCATCACAGGATTCCTCACGGAGCAGAATATTAAAATTGGAAAGCCAAATTACTTTTATTGA

Protein sequence

>Msa1197410

MVRLLSSPSSLRKGNLSFPSEILQENDKKKVLLGIGGGHYVPRHMDVVLKDDVWVGHLLSGYSVPMEDPKGETNVEIGGTWKQSIKAAYEATKSAFPGGEIIAHLDQRSFKGWQKNAITGFLTEQNIKIGKPNYFY*