AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318620 MtrunA17_Chr2g0292391 99.641 836 3 0 1 836 1 836 0.0 1731
Msa0318620 MtrunA17_Chr4g0028991 69.286 840 239 7 4 836 19 846 0.0 1193
Msa0318620 MtrunA17_Chr2g0331131 67.425 835 257 9 9 836 10 836 0.0 1162
Msa0318620 MtrunA17_Chr3g0140351 66.667 834 258 9 9 836 16 835 0.0 1154
Msa0318620 MtrunA17_Chr8g0340411 66.427 834 262 9 9 836 11 832 0.0 1151
Msa0318620 MtrunA17_Chr2g0326731 63.345 843 283 9 4 836 13 839 0.0 1097
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318620 AT2G34710.1 78.665 839 165 9 7 836 19 852 0.0 1360
Msa0318620 AT1G30490.1 76.813 841 170 10 7 836 15 841 0.0 1333
Msa0318620 AT5G60690.1 66.824 847 248 11 4 836 15 842 0.0 1145
Msa0318620 AT1G52150.1 66.189 837 261 13 9 836 13 836 0.0 1127
Msa0318620 AT1G52150.2 66.229 838 260 14 9 836 13 837 0.0 1125
Msa0318620 AT4G32880.1 64.628 834 278 12 9 836 11 833 0.0 1110
Msa0318620 AT1G52150.3 66.033 789 246 13 9 788 13 788 0.0 1050
Msa0318620 AT5G32670.1 80.000 70 14 0 286 355 37 106 1.24e-31 122
Msa0318620 AT3G03260.2 22.500 480 262 21 16 409 29 484 1.53e-11 68.2
Msa0318620 AT4G04890.2 30.534 131 62 3 13 122 65 187 2.61e-11 67.8
Msa0318620 AT4G04890.2 23.052 308 194 10 189 478 297 579 9.67e-11 66.2
Msa0318620 AT4G04890.1 30.534 131 62 3 13 122 65 187 2.61e-11 67.8
Msa0318620 AT4G04890.1 23.052 308 194 10 189 478 297 579 9.67e-11 66.2
Msa0318620 AT4G21750.2 23.625 309 191 10 189 478 306 588 3.22e-11 67.8
Msa0318620 AT4G21750.1 23.625 309 191 10 189 478 306 588 3.22e-11 67.8
Msa0318620 AT4G21750.3 23.625 309 191 10 189 478 306 588 3.22e-11 67.8
Msa0318620 AT4G21750.4 23.625 309 191 10 189 478 306 588 3.22e-11 67.8
Msa0318620 AT3G61150.1 31.783 129 67 3 13 124 113 237 9.52e-11 66.2

Find 240 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTAAGTATCTTGATTA+TGG 0.196543 2_4:-17730879 None:intergenic
AAATGATACTTAACTGATTT+AGG 0.211026 2_4:-17729749 None:intergenic
CGTGCCAGTGCAACATCTTC+TGG 0.212898 2_4:-17729476 None:intergenic
ATAGAAAGTGCCATTGTTAA+AGG 0.232468 2_4:-17725731 None:intergenic
CCACTCTCTTTCATAGAAAA+TGG 0.263136 2_4:-17725598 None:intergenic
AGTGATTCTCAAAGGTAAAT+TGG 0.270937 2_4:-17729981 None:intergenic
TCTCATCTGGTGTATGAAAA+TGG 0.286768 2_4:+17726680 Msa0318620:CDS
CTGGGGAAGCCACCGGGTCT+TGG 0.288137 2_4:-17729278 None:intergenic
GATGCCCTCTTATTGCCTTC+TGG 0.294752 2_4:+17729704 Msa0318620:CDS
CGATCAGAATGGGCTGATTA+TGG 0.299721 2_4:+17729200 Msa0318620:CDS
TCCAAAGCTTCAACTTGTTC+AGG 0.301125 2_4:-17725794 None:intergenic
CGATGACGGTTGGTCGTTGC+TGG 0.308758 2_4:+17728897 Msa0318620:CDS
CTTGGGCCAAAGTCTCTTCC+TGG 0.311536 2_4:+17730108 Msa0318620:CDS
CTGCAAAGGATTCATCTATA+GGG 0.317197 2_4:-17729679 None:intergenic
CGTGCCAAAGCATGAGCTTC+TGG 0.318520 2_4:-17730135 None:intergenic
GCTTCTACTGGTGGCCCTAC+AGG 0.321934 2_4:+17728236 Msa0318620:CDS
CCCTTTGAGGACGCTGAGTT+GGG 0.322005 2_4:-17727312 None:intergenic
TCATCAATGTTCCCAACATT+TGG 0.323462 2_4:+17728991 Msa0318620:CDS
TAGAGGGGCCTCAGAACTTC+AGG 0.327055 2_4:-17728471 None:intergenic
AATTACCTGTTGCATAATCT+TGG 0.333667 2_4:-17730594 None:intergenic
TCTGCAAAGGATTCATCTAT+AGG 0.335291 2_4:-17729680 None:intergenic
TGGCTGCAGCACGAGACTTT+TGG 0.335299 2_4:+17728067 Msa0318620:CDS
CACCCAGTCGACAGCAGTTC+CGG 0.346069 2_4:-17727505 None:intergenic
GTGATCAACAATATGAATAA+TGG 0.348818 2_4:-17728336 None:intergenic
AACCTAAACAGATCAAAGTT+TGG 0.353061 2_4:+17725900 Msa0318620:CDS
TGAAAATGATGAAGCTAGTT+TGG 0.359530 2_4:-17725664 None:intergenic
CGTGCTGCAGCCAAAGTTGT+AGG 0.366709 2_4:-17728057 None:intergenic
TCCTGAACAAGTTGAAGCTT+TGG 0.370693 2_4:+17725793 Msa0318620:CDS
AACCAAACTTTGATCTGTTT+AGG 0.371881 2_4:-17725902 None:intergenic
TGGTTTGAAAAGGTGAATAT+TGG 0.372040 2_4:-17730467 None:intergenic
GGAATTGATGAAAATTCAAT+TGG 0.372836 2_4:+17729632 Msa0318620:CDS
TAGCTTTCATGTTCATCAAC+TGG 0.374323 2_4:+17730836 Msa0318620:CDS
GTTCTTCTTCTTCACTGTGC+AGG 0.376804 2_4:-17725642 None:intergenic
GAAAACCAGAAGGCAATAAG+AGG 0.376994 2_4:-17729709 None:intergenic
AGCTATCCCACTAGAGTTGC+GGG 0.380281 2_4:-17727674 None:intergenic
TGCAATGAACAAGCTCTTGA+TGG 0.381020 2_4:+17726628 Msa0318620:CDS
GACGTATGCGCCTACAACTT+TGG 0.386052 2_4:+17728047 Msa0318620:intron
GCTGAGATATACTACAAGTT+TGG 0.392222 2_4:+17728092 Msa0318620:CDS
CCTGGCAGAGTTCCTATCTA+AGG 0.394397 2_4:+17727479 Msa0318620:CDS
CCTGGAGGTTGTTTGTATAG+AGG 0.403495 2_4:+17729439 Msa0318620:CDS
TCTCGGCCAGGTACTCAGCT+TGG 0.412971 2_4:+17730090 Msa0318620:CDS
CTGGCTGCTGGGGAAGCCAC+CGG 0.414221 2_4:-17729285 None:intergenic
AGGTAAAATGACCTGGCTGC+TGG 0.416199 2_4:-17729297 None:intergenic
GTCGACTGGGTGCAGATGAT+TGG 0.420555 2_4:+17727516 Msa0318620:CDS
CCACAACACTACGCACATAC+TGG 0.420779 2_4:-17730032 None:intergenic
CTCGGCCAGGTACTCAGCTT+GGG 0.425766 2_4:+17730091 Msa0318620:CDS
AAAGAGAGTGGAGGCTCTCT+TGG 0.430669 2_4:+17725610 Msa0318620:five_prime_UTR
CGTCCATCTGGTGAAGGTGC+TGG 0.432133 2_4:+17729916 Msa0318620:CDS
TGTCTTTGTGTAGCCTGGTC+CGG 0.433455 2_4:+17727627 Msa0318620:intron
GGGTTGTTTGCATCCCTTTG+AGG 0.434329 2_4:-17727325 None:intergenic
CTTCCTTTCTTTGCTTCTCA+CGG 0.436865 2_4:-17726571 None:intergenic
TTCGCCAGAAGCTCATGCTT+TGG 0.437914 2_4:+17730131 Msa0318620:CDS
GAAAATTAGTACAACTGTCT+TGG 0.439310 2_4:-17730970 None:intergenic
GTTCTCCAAGATTATGCAAC+AGG 0.439721 2_4:+17730589 Msa0318620:CDS
TCTAGTAATGCTCGTCCATC+TGG 0.440636 2_4:+17729904 Msa0318620:CDS
GTGCCAGTGCAACATCTTCT+GGG 0.442652 2_4:-17729475 None:intergenic
GAGCATTAGAATAGTTCAAA+AGG 0.443481 2_4:-17731009 None:intergenic
ATAGAAAATGGTGAGGTTGA+AGG 0.445451 2_4:-17725586 None:intergenic
TCCCTTTGAGGACGCTGAGT+TGG 0.445674 2_4:-17727313 None:intergenic
CAGGGTTATGCATCTCTGCC+AGG 0.448828 2_4:+17730721 Msa0318620:intron
GTTTAGGTTCAATGTTAGAA+AGG 0.451232 2_4:-17725886 None:intergenic
GCAGAAGCAAGTTTCTCATC+TGG 0.452876 2_4:+17726667 Msa0318620:CDS
CTGCAGCAGCATTGATGCCT+TGG 0.454506 2_4:-17729031 None:intergenic
TTTGTGTATCAAGTATGAAT+AGG 0.458792 2_4:+17730749 Msa0318620:CDS
CTGGAGGTTGTTTGTATAGA+GGG 0.458824 2_4:+17729440 Msa0318620:CDS
TCAGCTCTCACAAAATTTGA+CGG 0.461588 2_4:-17728266 None:intergenic
CACGTTTACAGACAGTGAAT+AGG 0.461719 2_4:+17726597 Msa0318620:CDS
GCATGAGCTTCTGGCGAACC+AGG 0.462184 2_4:-17730126 None:intergenic
CAAGGCATCAATGCTGCTGC+AGG 0.462680 2_4:+17729032 Msa0318620:CDS
TCCAGTGGAGAAATTCAGTA+TGG 0.463307 2_4:+17728646 Msa0318620:CDS
CTACCGGAACTGCTGTCGAC+TGG 0.464066 2_4:+17727502 Msa0318620:CDS
TAGTCTTCTCGCCGTGGCTG+AGG 0.466571 2_4:+17727452 Msa0318620:intron
TGTTGTCTTCTCAAAGAACT+AGG 0.467328 2_4:-17725842 None:intergenic
TCGACTGGGTGCAGATGATT+GGG 0.468510 2_4:+17727517 Msa0318620:CDS
CAGTTCCGGTAGCCTTAGAT+AGG 0.468587 2_4:-17727491 None:intergenic
AGAACATTGGATTTACTTGA+AGG 0.468751 2_4:+17729880 Msa0318620:CDS
CCATGGCAATTGCGCCCTCT+CGG 0.469500 2_4:+17730073 Msa0318620:CDS
TAGCCTGGTCCGGAATCTAT+TGG 0.469832 2_4:+17727637 Msa0318620:intron
CTTGGACACGGAACTGCATA+GGG 0.470550 2_4:-17729260 None:intergenic
TAAATTGGAATGCAATTGTA+AGG 0.473795 2_4:-17729966 None:intergenic
ACTTTCTATGCATAAAGAAA+TGG 0.474459 2_4:+17725745 Msa0318620:CDS
CTTCTCAAAGAACTAGGCTT+AGG 0.476477 2_4:-17725836 None:intergenic
ATGCAATATTGAAACAACTT+TGG 0.476907 2_4:+17730313 Msa0318620:CDS
ATTAAGAACTTTCCATGCAA+TGG 0.481074 2_4:-17730791 None:intergenic
GGTAAAATGACCTGGCTGCT+GGG 0.481892 2_4:-17729296 None:intergenic
CCCAACTCAGCGTCCTCAAA+GGG 0.484390 2_4:+17727312 Msa0318620:CDS
CTCTAGACTCACAAGGCCGC+AGG 0.485153 2_4:-17727704 None:intergenic
GGCGAACCAGGAAGAGACTT+TGG 0.485486 2_4:-17730114 None:intergenic
TCTTGGACACGGAACTGCAT+AGG 0.487296 2_4:-17729261 None:intergenic
TCAACTGGTCCTTTGTCTGA+TGG 0.487503 2_4:+17730851 Msa0318620:CDS
GCGCGACAATGTGGCTTCCA+TGG 0.487773 2_4:+17730005 Msa0318620:CDS
CCTTAGATAGGAACTCTGCC+AGG 0.488058 2_4:-17727479 None:intergenic
GCAATTGCGCCCTCTCGGCC+AGG 0.488973 2_4:+17730078 Msa0318620:CDS
CATGAAAGCTAAGCAGTGAT+TGG 0.490947 2_4:-17730824 None:intergenic
CAAGCATGTCTAGTCCAGCC+TGG 0.492233 2_4:-17730487 None:intergenic
GGTGAAGGTGCTGGTTCAAA+CGG 0.495460 2_4:+17729925 Msa0318620:CDS
CTTCTACTGGTGGCCCTACA+GGG 0.495589 2_4:+17728237 Msa0318620:CDS
CAACAAAATAATACCTTAGT+GGG 0.496377 2_4:-17727727 None:intergenic
ACAACAAAATAATACCTTAG+TGG 0.496744 2_4:-17727728 None:intergenic
CGCCGTGGCTGAGGAGACCC+TGG 0.498447 2_4:+17727461 Msa0318620:CDS
GAGGGAGCATCGATCAGAAT+GGG 0.498992 2_4:+17729190 Msa0318620:CDS
AGGGATGCAAACAACCCAGC+TGG 0.499948 2_4:+17727331 Msa0318620:CDS
CTTAACTGATTTAGGATCCA+AGG 0.504335 2_4:-17729741 None:intergenic
AAAGGTGTTACTAACCCAGC+TGG 0.505524 2_4:-17727346 None:intergenic
GCTGTTTCCCGCAACTCTAG+TGG 0.506941 2_4:+17727667 Msa0318620:CDS
CAGTCTATCTTTAAGAATCT+CGG 0.507367 2_4:-17727835 None:intergenic
AGACACCACCTCCAAATGTT+GGG 0.507773 2_4:-17729002 None:intergenic
TGAGGGAGCATCGATCAGAA+TGG 0.509076 2_4:+17729189 Msa0318620:CDS
TGGATGCTGGTAAATATGTA+AGG 0.509737 2_4:+17725765 Msa0318620:CDS
TACCGGAACTGCTGTCGACT+GGG 0.512119 2_4:+17727503 Msa0318620:CDS
TCAATGTTCCCAACATTTGG+AGG 0.512154 2_4:+17728994 Msa0318620:CDS
TGGGAACATTGATGAATAGT+TGG 0.512795 2_4:-17728983 None:intergenic
CAACTGTCTTGGATAGTCTC+AGG 0.513372 2_4:-17730959 None:intergenic
TGGCTGCTGGGGAAGCCACC+GGG 0.513406 2_4:-17729284 None:intergenic
CTAAAAGTTCTCAAAACAGC+TGG 0.514675 2_4:-17728682 None:intergenic
TTTGGCCCAAGCTGAGTACC+TGG 0.517249 2_4:-17730096 None:intergenic
TCCAATGTTCTTGATGTGGT+TGG 0.518577 2_4:-17729868 None:intergenic
TAGTCCAGCCTGGTTTGAAA+AGG 0.518962 2_4:-17730477 None:intergenic
TGGTGAGGTTGAAGGTGGTA+AGG 0.519188 2_4:-17725578 None:intergenic
AGTATTGTTCCCACTGGTGG+TGG 0.521836 2_4:+17727894 Msa0318620:CDS
CTTGAGACAAGTAGCAGAGT+AGG 0.522118 2_4:-17729231 None:intergenic
GCAACGATACCAATAGATTC+CGG 0.523309 2_4:-17727646 None:intergenic
AAGACACCACCTCCAAATGT+TGG 0.525330 2_4:-17729003 None:intergenic
AAGGTGTTGGCAGAGAGAGA+TGG 0.527863 2_4:-17725535 None:intergenic
CGGTGGCTTCCCCAGCAGCC+AGG 0.528869 2_4:+17729286 Msa0318620:CDS
GATAAAGTTCTTGATGAAGC+TGG 0.529856 2_4:+17730545 Msa0318620:CDS
CTTATTAGACCTTGCGAGGG+GGG 0.531367 2_4:+17728308 Msa0318620:CDS
GATGGATATCTAGAAGCTAC+AGG 0.533976 2_4:+17730157 Msa0318620:CDS
TGGTCGTTGCTGGGAAATGA+TGG 0.534044 2_4:+17728907 Msa0318620:CDS
AGCTGAGTACCTGGCCGAGA+GGG 0.534467 2_4:-17730087 None:intergenic
CCGAGAGGGCGCAATTGCCA+TGG 0.536523 2_4:-17730073 None:intergenic
GTTCAAACGGATACAACCTT+AGG 0.536568 2_4:+17729938 Msa0318620:CDS
TGCTCGATCGTAGGAGCAAG+AGG 0.537333 2_4:-17729317 None:intergenic
ATTGTTCCCACTGGTGGTGG+TGG 0.537797 2_4:+17727897 Msa0318620:CDS
ACCCAACTCAGCGTCCTCAA+AGG 0.537810 2_4:+17727311 Msa0318620:CDS
ATACCAATAGATTCCGGACC+AGG 0.538578 2_4:-17727640 None:intergenic
CTGTTTCCCGCAACTCTAGT+GGG 0.539369 2_4:+17727668 Msa0318620:CDS
AAGCCACCGGGTCTTGGACA+CGG 0.540863 2_4:-17729272 None:intergenic
ACCATACTGAATTTCTCCAC+TGG 0.540930 2_4:-17728647 None:intergenic
CTCCCCAGAAGATGTTGCAC+TGG 0.541488 2_4:+17729472 Msa0318620:CDS
TATACTACAAGTTTGGAAGA+TGG 0.542037 2_4:+17728099 Msa0318620:CDS
GGGATAGCTGCGCGAGCCTG+CGG 0.544178 2_4:+17727688 Msa0318620:CDS
GGGTTCAATGATGCTGTGAA+TGG 0.547394 2_4:+17728868 Msa0318620:CDS
ATGCATAAAGAAATGGATGC+TGG 0.548344 2_4:+17725752 Msa0318620:CDS
ACCTCTTCGTGCTCGATCGT+AGG 0.549405 2_4:-17729326 None:intergenic
GAGAAACTTGCTTCTGCAGA+CGG 0.551279 2_4:-17726661 None:intergenic
GGTGCAGATGATTGGGATGA+AGG 0.553628 2_4:+17727524 Msa0318620:CDS
TTGAGTATTGTTCCCACTGG+TGG 0.554422 2_4:+17727891 Msa0318620:CDS
GGAGAAATTCAGTATGGTGG+CGG 0.556309 2_4:+17728652 Msa0318620:CDS
AGATCGTTGAATGCTTCTAC+TGG 0.557406 2_4:+17728224 Msa0318620:CDS
GAGAAATTCAGTATGGTGGC+GGG 0.558050 2_4:+17728653 Msa0318620:CDS
AAGTTTGGTTTCAAAACCGA+AGG 0.558405 2_4:+17725915 Msa0318620:CDS
GTTGGCAGAGAGAGATGGAA+TGG 0.558514 2_4:-17725530 None:intergenic
GTGTTGTGGCATCAGTTCAG+AGG 0.560143 2_4:+17730046 Msa0318620:CDS
AAGTTCTTGATGAAGCTGGC+AGG 0.560167 2_4:+17730549 Msa0318620:CDS
TGTTGTGGCATCAGTTCAGA+GGG 0.563344 2_4:+17730047 Msa0318620:CDS
CTCACAAAATTTGACGGAGA+AGG 0.564082 2_4:-17728260 None:intergenic
TTGACGGAGAAGGCCCTGTA+GGG 0.564292 2_4:-17728250 None:intergenic
GTAAAATGACCTGGCTGCTG+GGG 0.565168 2_4:-17729295 None:intergenic
AGAGAGAAAACAGAGAGAGA+AGG 0.566058 2_4:-17725554 None:intergenic
AGCACATAATTGCATCAGAA+TGG 0.566597 2_4:-17730338 None:intergenic
TTCCTTATTAGACCTTGCGA+GGG 0.569278 2_4:+17728305 Msa0318620:CDS
ATGTTCCCAACATTTGGAGG+TGG 0.569970 2_4:+17728997 Msa0318620:CDS
CAATTGTAAGGACCGACCTA+AGG 0.571125 2_4:-17729954 None:intergenic
ACGCACATACTGGCGAGCCA+TGG 0.571373 2_4:-17730022 None:intergenic
ATCAGTTCAGAGGGTTGCCA+TGG 0.571681 2_4:+17730056 Msa0318620:CDS
GGTTCAATGTTAGAAAGGAT+AGG 0.572911 2_4:-17725881 None:intergenic
AAAACAGAGAGAGAAGGTGT+TGG 0.574621 2_4:-17725548 None:intergenic
TTTCCTTATTAGACCTTGCG+AGG 0.575216 2_4:+17728304 Msa0318620:CDS
GAACCAGCACCTTCACCAGA+TGG 0.575410 2_4:-17729919 None:intergenic
CAGCTATCCCACTAGAGTTG+CGG 0.576149 2_4:-17727675 None:intergenic
GGAGTGTCCCTGAAGTTCTG+AGG 0.576646 2_4:+17728463 Msa0318620:CDS
TCCAACCACATCAAGAACAT+TGG 0.578165 2_4:+17729867 Msa0318620:CDS
TTCTATTAGTCTTCTCGCCG+TGG 0.578172 2_4:+17727446 Msa0318620:intron
GTATTGAGTATTGTTCCCAC+TGG 0.580551 2_4:+17727888 Msa0318620:CDS
CTTATGAGCAAGCCATTGCA+TGG 0.582458 2_4:+17730779 Msa0318620:CDS
TTTGACGGAGAAGGCCCTGT+AGG 0.582982 2_4:-17728251 None:intergenic
TTAACTGATTTAGGATCCAA+GGG 0.583082 2_4:-17729740 None:intergenic
GAGTTCCTATCTAAGGCTAC+CGG 0.583759 2_4:+17727486 Msa0318620:CDS
AATAGAGCTTATGTACATGC+AGG 0.586783 2_4:+17727923 Msa0318620:CDS
GATGACGGTTGGTCGTTGCT+GGG 0.587967 2_4:+17728898 Msa0318620:CDS
ATGCCGTGAGAAGCAAAGAA+AGG 0.588074 2_4:+17726568 Msa0318620:CDS
CCTCTATACAAACAACCTCC+AGG 0.588675 2_4:-17729439 None:intergenic
GGGATGCAAACAACCCAGCT+GGG 0.589348 2_4:+17727332 Msa0318620:CDS
CTTGATACACAAATCCCTCC+TGG 0.589795 2_4:-17730739 None:intergenic
GTGAATGGATTTGTCGATGA+CGG 0.594332 2_4:+17728883 Msa0318620:CDS
GCAGTTCCGTGTCCAAGACC+CGG 0.594391 2_4:+17729266 Msa0318620:CDS
TTTGGAAGATGGAAGTCTTG+TGG 0.594978 2_4:+17728110 Msa0318620:CDS
ATGGATTTGTCGATGACGGT+TGG 0.598019 2_4:+17728887 Msa0318620:CDS
CCTTATTAGACCTTGCGAGG+GGG 0.598121 2_4:+17728307 Msa0318620:CDS
TGCAAAGGATTCATCTATAG+GGG 0.599441 2_4:-17729678 None:intergenic
AGACAATAGCTGTGATTCTG+TGG 0.600443 2_4:+17727261 Msa0318620:CDS
AAGCTCATGCTTTGGCACGA+TGG 0.600650 2_4:+17730139 Msa0318620:CDS
CTCTTTCATAGAAAATGGTG+AGG 0.604373 2_4:-17725593 None:intergenic
AACTTGTTGCAGCTTTGCAG+TGG 0.607045 2_4:+17729611 Msa0318620:intron
TCCTACGATCGAGCACGAAG+AGG 0.610109 2_4:+17729325 Msa0318620:CDS
GAAAATGGTGAGGTTGAAGG+TGG 0.611244 2_4:-17725583 None:intergenic
AGAGGGGCCTCAGAACTTCA+GGG 0.614871 2_4:-17728470 None:intergenic
AGGTGGTGTCTTGTGTGCCA+AGG 0.616015 2_4:+17729014 Msa0318620:CDS
TAAATCCAATGTTCTTGATG+TGG 0.616299 2_4:-17729872 None:intergenic
TCGTTGAATGCTTCTACTGG+TGG 0.616426 2_4:+17728227 Msa0318620:CDS
TATTGTACCACCACCACCAG+TGG 0.616482 2_4:-17727904 None:intergenic
TAAGAGGGCATCATCTGCAA+AGG 0.617843 2_4:-17729693 None:intergenic
TGCCAGGGTCTCCTCAGCCA+CGG 0.620608 2_4:-17727463 None:intergenic
GAGCAAGAGGTAAAATGACC+TGG 0.621422 2_4:-17729304 None:intergenic
TCCTTATTAGACCTTGCGAG+GGG 0.621648 2_4:+17728306 Msa0318620:CDS
ATTTATATATGTAGTCATAG+AGG 0.623608 2_4:-17731031 None:intergenic
AAGTTCTCAAAACAGCTGGT+TGG 0.626436 2_4:-17728678 None:intergenic
GTCGCGCAAGTGATTCTCAA+AGG 0.627622 2_4:-17729989 None:intergenic
CTTAGATAGGAACTCTGCCA+GGG 0.627679 2_4:-17727478 None:intergenic
TACTCAATACATCAACGCAT+CGG 0.631222 2_4:-17727875 None:intergenic
ATGGCTTGCTCATAAGACAC+TGG 0.631254 2_4:-17730772 None:intergenic
GTTATGCATCTCTGCCAGGA+GGG 0.632885 2_4:+17730725 Msa0318620:CDS
AATGCTCGTCCATCTGGTGA+AGG 0.634918 2_4:+17729910 Msa0318620:CDS
AAGGTGTTACTAACCCAGCT+GGG 0.638352 2_4:-17727345 None:intergenic
TGTGAGTCTAGAGCCCACTA+AGG 0.639840 2_4:+17727714 Msa0318620:CDS
ATGGTTTCTCCATCAGACAA+AGG 0.640205 2_4:-17730860 None:intergenic
AAAACCAGAAGGCAATAAGA+GGG 0.641093 2_4:-17729708 None:intergenic
CCAGTATGTGCGTAGTGTTG+TGG 0.642038 2_4:+17730032 Msa0318620:CDS
ATTGTACCACCACCACCAGT+GGG 0.642522 2_4:-17727903 None:intergenic
GAATCACTTGCGCGACAATG+TGG 0.642715 2_4:+17729996 Msa0318620:CDS
CAGTGAAGGAGAGTAGTGTG+TGG 0.643752 2_4:-17725498 None:intergenic
AGTGGAGAAATTCAGTATGG+TGG 0.644496 2_4:+17728649 Msa0318620:CDS
CAGATAGCACAAGAATCCAG+TGG 0.652309 2_4:+17728631 Msa0318620:CDS
GGAATAACTCGAAAACCAGA+AGG 0.653126 2_4:-17729719 None:intergenic
TGCATTGGTGCAGTTCCTGG+AGG 0.655275 2_4:+17729424 Msa0318620:intron
CAATATTGCATCACTCGCTG+CGG 0.656475 2_4:-17730301 None:intergenic
TTCTTAAAGATAGACTGTCA+TGG 0.657592 2_4:+17727841 Msa0318620:CDS
GGTCTAATAAGGAAACCACT+AGG 0.658788 2_4:-17728296 None:intergenic
TGCCAGTGCAACATCTTCTG+GGG 0.660194 2_4:-17729474 None:intergenic
AGAATCACAGCTATTGTCTG+TGG 0.665084 2_4:-17727257 None:intergenic
AAGCTGAGTACCTGGCCGAG+AGG 0.669722 2_4:-17730088 None:intergenic
GGTTATGCATCTCTGCCAGG+AGG 0.674411 2_4:+17730724 Msa0318620:CDS
AATCGAACAAGCAAAGCAGG+AGG 0.677556 2_4:-17729164 None:intergenic
TAGTGGGCTCTAGACTCACA+AGG 0.690812 2_4:-17727711 None:intergenic
TGTGATTCTGTGGTAATGAG+TGG 0.695611 2_4:+17727271 Msa0318620:CDS
AGAGCTGAAATGCTTCCTAG+TGG 0.697674 2_4:+17728281 Msa0318620:CDS
GTTCCGTGTCCAAGACCCGG+TGG 0.700440 2_4:+17729269 Msa0318620:CDS
TTGGACACGGAACTGCATAG+GGG 0.719102 2_4:-17729259 None:intergenic
AAACGGATACAACCTTAGGT+CGG 0.721957 2_4:+17729942 Msa0318620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGTTACTAAATTTTAAAA+GGG - chr2_4:17726303-17726322 None:intergenic 10.0%
!!! AAATGTTACTAAATTTTAAA+AGG - chr2_4:17726304-17726323 None:intergenic 10.0%
!! AATTGTAATAATAAAATGAT+AGG - chr2_4:17728148-17728167 None:intergenic 10.0%
!!! TATTTAACATTTTTTTTTTC+AGG + chr2_4:17728437-17728456 Msa0318620:intron 10.0%
!! TCATAATGACAAAAAAAAAA+TGG - chr2_4:17726022-17726041 None:intergenic 15.0%
!! AATGTTACAAAATATTCAAA+GGG - chr2_4:17726120-17726139 None:intergenic 15.0%
!! AAATGTTACAAAATATTCAA+AGG - chr2_4:17726121-17726140 None:intergenic 15.0%
!!! TCTATTTTCATTTATATGTT+AGG + chr2_4:17727049-17727068 Msa0318620:intron 15.0%
!!! TTTCTTTTGTAGAATAAATT+AGG - chr2_4:17727950-17727969 None:intergenic 15.0%
!! AAAATTAAGTATCTTGATTA+TGG - chr2_4:17730882-17730901 None:intergenic 15.0%
!!! CTTGCATTTTAAATATTTAA+AGG - chr2_4:17731059-17731078 None:intergenic 15.0%
!!! TTAAAATGCAAGTTTTATTT+TGG + chr2_4:17731067-17731086 Msa0318620:three_prime_UTR 15.0%
!!! TAAAATGCAAGTTTTATTTT+GGG + chr2_4:17731068-17731087 Msa0318620:three_prime_UTR 15.0%
!!! TTTCTTTTTTCCTTTAACAA+TGG + chr2_4:17725721-17725740 Msa0318620:exon 20.0%
!!! GAAAAAATGTTTTCACTTTT+TGG + chr2_4:17725985-17726004 Msa0318620:intron 20.0%
!!! TTTTTGTCATTATGAAAGAA+AGG + chr2_4:17726027-17726046 Msa0318620:intron 20.0%
!!! TTTGAATGAAAATAACTTGT+GGG + chr2_4:17726053-17726072 Msa0318620:intron 20.0%
!! TTGAAAGAATGAACAAAAAA+AGG - chr2_4:17726198-17726217 None:intergenic 20.0%
!!! AAGAAAAAAAGAACTTTTGA+TGG + chr2_4:17726240-17726259 Msa0318620:intron 20.0%
!!! TAATTTCAAAAGCACATTTT+TGG - chr2_4:17726409-17726428 None:intergenic 20.0%
!!! ACGCGAAATTTTTAAAATTT+AGG + chr2_4:17726848-17726867 Msa0318620:intron 20.0%
!!! TTAAAATTTAGGATACGATA+CGG + chr2_4:17726859-17726878 Msa0318620:intron 20.0%
!!! TGATCTATTGAACAATTTTA+TGG + chr2_4:17727566-17727585 Msa0318620:intron 20.0%
!! ATTTATTGAAATGATTATGC+TGG + chr2_4:17728189-17728208 Msa0318620:intron 20.0%
!!! AACATTTTTTTTTTCAGGTT+TGG + chr2_4:17728442-17728461 Msa0318620:intron 20.0%
!!! TGAGAGTATGAATAATAAAT+TGG - chr2_4:17728801-17728820 None:intergenic 20.0%
!! TATTATTATGTGCTTATTTG+CGG + chr2_4:17729396-17729415 Msa0318620:intron 20.0%
!!! TTGTATATTTTGAAGTAGTA+AGG + chr2_4:17729543-17729562 Msa0318620:intron 20.0%
!!! AAATGATACTTAACTGATTT+AGG - chr2_4:17729752-17729771 None:intergenic 20.0%
!! GTAAAAACAAATGTAATAAC+TGG + chr2_4:17730366-17730385 Msa0318620:intron 20.0%
!!! TATGCAATTTAATTTGAACA+TGG + chr2_4:17730648-17730667 Msa0318620:intron 20.0%
!!! GGAATTTTTTGAATAACTTT+AGG + chr2_4:17730669-17730688 Msa0318620:intron 20.0%
!! ATTTATATATGTAGTCATAG+AGG - chr2_4:17731034-17731053 None:intergenic 20.0%
! ACTTTCTATGCATAAAGAAA+TGG + chr2_4:17725745-17725764 Msa0318620:CDS 25.0%
! AAAGTTGAAAAGTTTACCTT+CGG - chr2_4:17725934-17725953 None:intergenic 25.0%
!!! AAATGTTTTCACTTTTTGGT+TGG + chr2_4:17725989-17726008 Msa0318620:intron 25.0%
! CTTTGAATGAAAATAACTTG+TGG + chr2_4:17726052-17726071 Msa0318620:intron 25.0%
!! TTGAATGAAAATAACTTGTG+GGG + chr2_4:17726054-17726073 Msa0318620:intron 25.0%
! GATAAAAGAAAGAACTTTGA+AGG + chr2_4:17726144-17726163 Msa0318620:intron 25.0%
! TGAAACAAAACATTAATGCT+TGG + chr2_4:17726361-17726380 Msa0318620:intron 25.0%
!!! AAACATTAATGCTTGGTTTT+TGG + chr2_4:17726368-17726387 Msa0318620:intron 25.0%
! AAGAAATTTAAATGCCAAAG+GGG - chr2_4:17726461-17726480 None:intergenic 25.0%
! CAAGAAATTTAAATGCCAAA+GGG - chr2_4:17726462-17726481 None:intergenic 25.0%
! ACAAGAAATTTAAATGCCAA+AGG - chr2_4:17726463-17726482 None:intergenic 25.0%
!! ATGTAGTTTTCTGCATTTAA+TGG + chr2_4:17726505-17726524 Msa0318620:intron 25.0%
! CCTATTCAAAAAGAAAAAGT+TGG - chr2_4:17727222-17727241 None:intergenic 25.0%
!!! CCAACTTTTTCTTTTTGAAT+AGG + chr2_4:17727219-17727238 Msa0318620:intron 25.0%
! TACACAATGCAACAAAAAAA+AGG - chr2_4:17727367-17727386 None:intergenic 25.0%
! CAACAAAATAATACCTTAGT+GGG - chr2_4:17727730-17727749 None:intergenic 25.0%
! ACAACAAAATAATACCTTAG+TGG - chr2_4:17727731-17727750 None:intergenic 25.0%
! GTGATCAACAATATGAATAA+TGG - chr2_4:17728339-17728358 None:intergenic 25.0%
! ATGCAAATACAAGATACTAA+AGG - chr2_4:17729374-17729393 None:intergenic 25.0%
! GGAATTGATGAAAATTCAAT+TGG + chr2_4:17729632-17729651 Msa0318620:CDS 25.0%
! GTTTCATTAAATTAATGCAG+TGG - chr2_4:17729783-17729802 None:intergenic 25.0%
! AATACATCAACATATGTTTC+AGG - chr2_4:17729826-17729845 None:intergenic 25.0%
! TAAATTGGAATGCAATTGTA+AGG - chr2_4:17729969-17729988 None:intergenic 25.0%
!! TATATGTTGTTGTCTTTTTC+AGG + chr2_4:17730244-17730263 Msa0318620:intron 25.0%
! ATGCAATATTGAAACAACTT+TGG + chr2_4:17730313-17730332 Msa0318620:CDS 25.0%
! AAAGTCAGAAGAATACTAAA+AGG - chr2_4:17730424-17730443 None:intergenic 25.0%
!!! ACTTTTGAGAATATTATTGC+AGG + chr2_4:17730439-17730458 Msa0318620:intron 25.0%
!!! TAATCTGTTGTTATTTTTCC+AGG + chr2_4:17730702-17730721 Msa0318620:intron 25.0%
!!! AATCTGTTGTTATTTTTCCA+GGG + chr2_4:17730703-17730722 Msa0318620:intron 25.0%
! TTTGTGTATCAAGTATGAAT+AGG + chr2_4:17730749-17730768 Msa0318620:CDS 25.0%
AATGGAACAAAAAACAGTGA+AGG - chr2_4:17725515-17725534 None:intergenic 30.0%
TGAAAATGATGAAGCTAGTT+TGG - chr2_4:17725667-17725686 None:intergenic 30.0%
!! ATAGAAAGTGCCATTGTTAA+AGG - chr2_4:17725734-17725753 None:intergenic 30.0%
! GTTTAGGTTCAATGTTAGAA+AGG - chr2_4:17725889-17725908 None:intergenic 30.0%
AACCTAAACAGATCAAAGTT+TGG + chr2_4:17725900-17725919 Msa0318620:CDS 30.0%
AACCAAACTTTGATCTGTTT+AGG - chr2_4:17725905-17725924 None:intergenic 30.0%
! ACTTTGAAGGAAATAACTTG+TGG + chr2_4:17726157-17726176 Msa0318620:intron 30.0%
! CTTTGAAGGAAATAACTTGT+GGG + chr2_4:17726158-17726177 Msa0318620:intron 30.0%
! TTTGAAGGAAATAACTTGTG+GGG + chr2_4:17726159-17726178 Msa0318620:intron 30.0%
AATTTCATTGTTCAACAGCA+AGG - chr2_4:17727767-17727786 None:intergenic 30.0%
!! TCTGTGTTTACTTTTGTCTT+AGG + chr2_4:17727809-17727828 Msa0318620:intron 30.0%
! CAGTCTATCTTTAAGAATCT+CGG - chr2_4:17727838-17727857 None:intergenic 30.0%
TTCTTAAAGATAGACTGTCA+TGG + chr2_4:17727841-17727860 Msa0318620:CDS 30.0%
TATACTACAAGTTTGGAAGA+TGG + chr2_4:17728099-17728118 Msa0318620:CDS 30.0%
!! ATCACGTTGATTTAGATGTA+AGG + chr2_4:17728354-17728373 Msa0318620:intron 30.0%
!! TCACGTTGATTTAGATGTAA+GGG + chr2_4:17728355-17728374 Msa0318620:intron 30.0%
! ATTTTTGACGATTCATAGAG+GGG - chr2_4:17728489-17728508 None:intergenic 30.0%
! GATTTTTGACGATTCATAGA+GGG - chr2_4:17728490-17728509 None:intergenic 30.0%
! AGATTTTTGACGATTCATAG+AGG - chr2_4:17728491-17728510 None:intergenic 30.0%
CTATGAATCGTCAAAAATCT+TGG + chr2_4:17728491-17728510 Msa0318620:CDS 30.0%
AGATAGAGTGAGTTAGAATT+AGG - chr2_4:17728824-17728843 None:intergenic 30.0%
!! ATCTCAACAAGTTGGTTATT+AGG - chr2_4:17729110-17729129 None:intergenic 30.0%
! TTTGCTTGTTCGATTTTTGA+GGG + chr2_4:17729172-17729191 Msa0318620:CDS 30.0%
! TTAACTGATTTAGGATCCAA+GGG - chr2_4:17729743-17729762 None:intergenic 30.0%
TAAATCCAATGTTCTTGATG+TGG - chr2_4:17729875-17729894 None:intergenic 30.0%
AGAACATTGGATTTACTTGA+AGG + chr2_4:17729880-17729899 Msa0318620:CDS 30.0%
AGTGATTCTCAAAGGTAAAT+TGG - chr2_4:17729984-17730003 None:intergenic 30.0%
TGGTTTGAAAAGGTGAATAT+TGG - chr2_4:17730470-17730489 None:intergenic 30.0%
! AATATTCACCTTTTCAAACC+AGG + chr2_4:17730469-17730488 Msa0318620:CDS 30.0%
AATTACCTGTTGCATAATCT+TGG - chr2_4:17730597-17730616 None:intergenic 30.0%
ATTAAGAACTTTCCATGCAA+TGG - chr2_4:17730794-17730813 None:intergenic 30.0%
GAAAATTAGTACAACTGTCT+TGG - chr2_4:17730973-17730992 None:intergenic 30.0%
GAGCATTAGAATAGTTCAAA+AGG - chr2_4:17731012-17731031 None:intergenic 30.0%
ATAGAAAATGGTGAGGTTGA+AGG - chr2_4:17725589-17725608 None:intergenic 35.0%
CTCTTTCATAGAAAATGGTG+AGG - chr2_4:17725596-17725615 None:intergenic 35.0%
CCACTCTCTTTCATAGAAAA+TGG - chr2_4:17725601-17725620 None:intergenic 35.0%
! CCATTTTCTATGAAAGAGAG+TGG + chr2_4:17725598-17725617 Msa0318620:five_prime_UTR 35.0%
! TTTTCTATGAAAGAGAGTGG+AGG + chr2_4:17725601-17725620 Msa0318620:five_prime_UTR 35.0%
ATGCATAAAGAAATGGATGC+TGG + chr2_4:17725752-17725771 Msa0318620:CDS 35.0%
TGGATGCTGGTAAATATGTA+AGG + chr2_4:17725765-17725784 Msa0318620:CDS 35.0%
TGTTGTCTTCTCAAAGAACT+AGG - chr2_4:17725845-17725864 None:intergenic 35.0%
GGTTCAATGTTAGAAAGGAT+AGG - chr2_4:17725884-17725903 None:intergenic 35.0%
! AAGTTTGGTTTCAAAACCGA+AGG + chr2_4:17725915-17725934 Msa0318620:CDS 35.0%
!!! GTTTTCACTTTTTGGTTGGT+TGG + chr2_4:17725993-17726012 Msa0318620:intron 35.0%
AAAGGGGTTAATAACATCAC+TGG - chr2_4:17726445-17726464 None:intergenic 35.0%
AGTGATGTTATTAACCCCTT+TGG + chr2_4:17726444-17726463 Msa0318620:intron 35.0%
TCTGCATTTAATGGTGAATG+TGG + chr2_4:17726514-17726533 Msa0318620:intron 35.0%
TCTCATCTGGTGTATGAAAA+TGG + chr2_4:17726680-17726699 Msa0318620:CDS 35.0%
TTTAATGTCTTTGTGTAGCC+TGG + chr2_4:17727622-17727641 Msa0318620:intron 35.0%
TACTCAATACATCAACGCAT+CGG - chr2_4:17727878-17727897 None:intergenic 35.0%
AATAGAGCTTATGTACATGC+AGG + chr2_4:17727923-17727942 Msa0318620:CDS 35.0%
GCTGAGATATACTACAAGTT+TGG + chr2_4:17728092-17728111 Msa0318620:CDS 35.0%
TCAGCTCTCACAAAATTTGA+CGG - chr2_4:17728269-17728288 None:intergenic 35.0%
TTGTTGAACTCTTCTGACTT+CGG + chr2_4:17728414-17728433 Msa0318620:intron 35.0%
! CATTTTAAACTCCACTTTGC+AGG + chr2_4:17728591-17728610 Msa0318620:intron 35.0%
CTAAAAGTTCTCAAAACAGC+TGG - chr2_4:17728685-17728704 None:intergenic 35.0%
! CTTGACACCTTTCATTTTCA+GGG + chr2_4:17728846-17728865 Msa0318620:intron 35.0%
! TTGACACCTTTCATTTTCAG+GGG + chr2_4:17728847-17728866 Msa0318620:intron 35.0%
! TCGTCTCCAAACAAGTTTTT+GGG + chr2_4:17728958-17728977 Msa0318620:CDS 35.0%
TGGGAACATTGATGAATAGT+TGG - chr2_4:17728986-17729005 None:intergenic 35.0%
TCATCAATGTTCCCAACATT+TGG + chr2_4:17728991-17729010 Msa0318620:CDS 35.0%
!! TCAACAAGTTGGTTATTAGG+AGG - chr2_4:17729107-17729126 None:intergenic 35.0%
TCAGAAAGATCTCAACAAGT+TGG - chr2_4:17729118-17729137 None:intergenic 35.0%
AAAAATCGAACAAGCAAAGC+AGG - chr2_4:17729170-17729189 None:intergenic 35.0%
! CTTTGCTTGTTCGATTTTTG+AGG + chr2_4:17729171-17729190 Msa0318620:CDS 35.0%
TTATTTGCGGTATGTTGCAT+TGG + chr2_4:17729409-17729428 Msa0318620:intron 35.0%
! ACGTGATATGTATCTTTTGC+AGG + chr2_4:17729496-17729515 Msa0318620:CDS 35.0%
CAACAAGTTTCATACACAGA+AGG - chr2_4:17729600-17729619 None:intergenic 35.0%
TGCAAAGGATTCATCTATAG+GGG - chr2_4:17729681-17729700 None:intergenic 35.0%
CTGCAAAGGATTCATCTATA+GGG - chr2_4:17729682-17729701 None:intergenic 35.0%
TCTGCAAAGGATTCATCTAT+AGG - chr2_4:17729683-17729702 None:intergenic 35.0%
AAAACCAGAAGGCAATAAGA+GGG - chr2_4:17729711-17729730 None:intergenic 35.0%
! CTTAACTGATTTAGGATCCA+AGG - chr2_4:17729744-17729763 None:intergenic 35.0%
AGCACATAATTGCATCAGAA+TGG - chr2_4:17730341-17730360 None:intergenic 35.0%
GATAAAGTTCTTGATGAAGC+TGG + chr2_4:17730545-17730564 Msa0318620:CDS 35.0%
TAGCTTTCATGTTCATCAAC+TGG + chr2_4:17730836-17730855 Msa0318620:CDS 35.0%
! AAAACAGAGAGAGAAGGTGT+TGG - chr2_4:17725551-17725570 None:intergenic 40.0%
AGAGAGAAAACAGAGAGAGA+AGG - chr2_4:17725557-17725576 None:intergenic 40.0%
! TCCTGAACAAGTTGAAGCTT+TGG + chr2_4:17725793-17725812 Msa0318620:CDS 40.0%
! TCCAAAGCTTCAACTTGTTC+AGG - chr2_4:17725797-17725816 None:intergenic 40.0%
CTTCTCAAAGAACTAGGCTT+AGG - chr2_4:17725839-17725858 None:intergenic 40.0%
! GAAATAACTTGTGGGGTGTT+TGG + chr2_4:17726166-17726185 Msa0318620:intron 40.0%
CTTCCTTTCTTTGCTTCTCA+CGG - chr2_4:17726574-17726593 None:intergenic 40.0%
CACGTTTACAGACAGTGAAT+AGG + chr2_4:17726597-17726616 Msa0318620:CDS 40.0%
TGCAATGAACAAGCTCTTGA+TGG + chr2_4:17726628-17726647 Msa0318620:CDS 40.0%
TTGTTTATGCCTATGAAGCC+CGG + chr2_4:17726781-17726800 Msa0318620:intron 40.0%
AGAATCACAGCTATTGTCTG+TGG - chr2_4:17727260-17727279 None:intergenic 40.0%
AGACAATAGCTGTGATTCTG+TGG + chr2_4:17727261-17727280 Msa0318620:CDS 40.0%
! TGTGATTCTGTGGTAATGAG+TGG + chr2_4:17727271-17727290 Msa0318620:CDS 40.0%
GCAACGATACCAATAGATTC+CGG - chr2_4:17727649-17727668 None:intergenic 40.0%
TTCATTGTTCAACAGCAAGG+AGG - chr2_4:17727764-17727783 None:intergenic 40.0%
! GTATTGAGTATTGTTCCCAC+TGG + chr2_4:17727888-17727907 Msa0318620:CDS 40.0%
TTTGGAAGATGGAAGTCTTG+TGG + chr2_4:17728110-17728129 Msa0318620:CDS 40.0%
AGATCGTTGAATGCTTCTAC+TGG + chr2_4:17728224-17728243 Msa0318620:CDS 40.0%
CTCACAAAATTTGACGGAGA+AGG - chr2_4:17728263-17728282 None:intergenic 40.0%
GGTCTAATAAGGAAACCACT+AGG - chr2_4:17728299-17728318 None:intergenic 40.0%
TTTCCTTATTAGACCTTGCG+AGG + chr2_4:17728304-17728323 Msa0318620:CDS 40.0%
TTCCTTATTAGACCTTGCGA+GGG + chr2_4:17728305-17728324 Msa0318620:CDS 40.0%
TCCAGTGGAGAAATTCAGTA+TGG + chr2_4:17728646-17728665 Msa0318620:CDS 40.0%
ACCATACTGAATTTCTCCAC+TGG - chr2_4:17728650-17728669 None:intergenic 40.0%
AGTGGAGAAATTCAGTATGG+TGG + chr2_4:17728649-17728668 Msa0318620:CDS 40.0%
AAGTTCTCAAAACAGCTGGT+TGG - chr2_4:17728681-17728700 None:intergenic 40.0%
! CTTTTAGTCAGAGACTTTGC+AGG + chr2_4:17728698-17728717 Msa0318620:CDS 40.0%
!! CCTGAAAATGAAAGGTGTCA+AGG - chr2_4:17728848-17728867 None:intergenic 40.0%
! CCTTGACACCTTTCATTTTC+AGG + chr2_4:17728845-17728864 Msa0318620:intron 40.0%
!! TGACACCTTTCATTTTCAGG+GGG + chr2_4:17728848-17728867 Msa0318620:intron 40.0%
TTGAACCCCCTGAAAATGAA+AGG - chr2_4:17728856-17728875 None:intergenic 40.0%
! GTGAATGGATTTGTCGATGA+CGG + chr2_4:17728883-17728902 Msa0318620:CDS 40.0%
! CTCGTCTCCAAACAAGTTTT+TGG + chr2_4:17728957-17728976 Msa0318620:CDS 40.0%
! CGTCTCCAAACAAGTTTTTG+GGG + chr2_4:17728959-17728978 Msa0318620:CDS 40.0%
! TTGGACCCCAAAAACTTGTT+TGG - chr2_4:17728967-17728986 None:intergenic 40.0%
TCAATGTTCCCAACATTTGG+AGG + chr2_4:17728994-17729013 Msa0318620:CDS 40.0%
CTGGAGGTTGTTTGTATAGA+GGG + chr2_4:17729440-17729459 Msa0318620:CDS 40.0%
GAAAACCAGAAGGCAATAAG+AGG - chr2_4:17729712-17729731 None:intergenic 40.0%
GGAATAACTCGAAAACCAGA+AGG - chr2_4:17729722-17729741 None:intergenic 40.0%
!!! TGGTTTTCGAGTTATTCCCT+TGG + chr2_4:17729724-17729743 Msa0318620:CDS 40.0%
TGTATTGAATTCTGCATCGC+AGG + chr2_4:17729840-17729859 Msa0318620:intron 40.0%
TCCAACCACATCAAGAACAT+TGG + chr2_4:17729867-17729886 Msa0318620:CDS 40.0%
TCCAATGTTCTTGATGTGGT+TGG - chr2_4:17729871-17729890 None:intergenic 40.0%
GTTCAAACGGATACAACCTT+AGG + chr2_4:17729938-17729957 Msa0318620:CDS 40.0%
AAACGGATACAACCTTAGGT+CGG + chr2_4:17729942-17729961 Msa0318620:CDS 40.0%
GATGGATATCTAGAAGCTAC+AGG + chr2_4:17730157-17730176 Msa0318620:CDS 40.0%
! GGACTCAACTCTAAAAAGCT+CGG - chr2_4:17730283-17730302 None:intergenic 40.0%
GTTCTCCAAGATTATGCAAC+AGG + chr2_4:17730589-17730608 Msa0318620:CDS 40.0%
CATGAAAGCTAAGCAGTGAT+TGG - chr2_4:17730827-17730846 None:intergenic 40.0%
ATGGTTTCTCCATCAGACAA+AGG - chr2_4:17730863-17730882 None:intergenic 40.0%
GAAAATGGTGAGGTTGAAGG+TGG - chr2_4:17725586-17725605 None:intergenic 45.0%
GTTCTTCTTCTTCACTGTGC+AGG - chr2_4:17725645-17725664 None:intergenic 45.0%
ATGCCGTGAGAAGCAAAGAA+AGG + chr2_4:17726568-17726587 Msa0318620:CDS 45.0%
! GAGAAACTTGCTTCTGCAGA+CGG - chr2_4:17726664-17726683 None:intergenic 45.0%
GCAGAAGCAAGTTTCTCATC+TGG + chr2_4:17726667-17726686 Msa0318620:CDS 45.0%
GATACGGGTACGATACGATA+CGG + chr2_4:17726815-17726834 Msa0318620:intron 45.0%
ATACGGGTACGATACGATAC+GGG + chr2_4:17726816-17726835 Msa0318620:intron 45.0%
!! AAGGTGTTACTAACCCAGCT+GGG - chr2_4:17727348-17727367 None:intergenic 45.0%
!! AAAGGTGTTACTAACCCAGC+TGG - chr2_4:17727349-17727368 None:intergenic 45.0%
!! TTCTATTAGTCTTCTCGCCG+TGG + chr2_4:17727446-17727465 Msa0318620:intron 45.0%
CTTAGATAGGAACTCTGCCA+GGG - chr2_4:17727481-17727500 None:intergenic 45.0%
! GAGTTCCTATCTAAGGCTAC+CGG + chr2_4:17727486-17727505 Msa0318620:CDS 45.0%
ATACCAATAGATTCCGGACC+AGG - chr2_4:17727643-17727662 None:intergenic 45.0%
! TTGAGTATTGTTCCCACTGG+TGG + chr2_4:17727891-17727910 Msa0318620:CDS 45.0%
TCGTTGAATGCTTCTACTGG+TGG + chr2_4:17728227-17728246 Msa0318620:CDS 45.0%
AGAGCTGAAATGCTTCCTAG+TGG + chr2_4:17728281-17728300 Msa0318620:CDS 45.0%
TCCTTATTAGACCTTGCGAG+GGG + chr2_4:17728306-17728325 Msa0318620:CDS 45.0%
CAGATAGCACAAGAATCCAG+TGG + chr2_4:17728631-17728650 Msa0318620:CDS 45.0%
GGAGAAATTCAGTATGGTGG+CGG + chr2_4:17728652-17728671 Msa0318620:CDS 45.0%
GAGAAATTCAGTATGGTGGC+GGG + chr2_4:17728653-17728672 Msa0318620:CDS 45.0%
TAGTCAGAGACTTTGCAGGT+AGG + chr2_4:17728702-17728721 Msa0318620:intron 45.0%
AGTCAGAGACTTTGCAGGTA+GGG + chr2_4:17728703-17728722 Msa0318620:intron 45.0%
TTGAATCGTGGCAGCATGTT+AGG - chr2_4:17728730-17728749 None:intergenic 45.0%
GGGTTCAATGATGCTGTGAA+TGG + chr2_4:17728868-17728887 Msa0318620:CDS 45.0%
! ATGGATTTGTCGATGACGGT+TGG + chr2_4:17728887-17728906 Msa0318620:CDS 45.0%
ATGTTCCCAACATTTGGAGG+TGG + chr2_4:17728997-17729016 Msa0318620:CDS 45.0%
AGACACCACCTCCAAATGTT+GGG - chr2_4:17729005-17729024 None:intergenic 45.0%
AAGACACCACCTCCAAATGT+TGG - chr2_4:17729006-17729025 None:intergenic 45.0%
AATCGAACAAGCAAAGCAGG+AGG - chr2_4:17729167-17729186 None:intergenic 45.0%
!! CGATCAGAATGGGCTGATTA+TGG + chr2_4:17729200-17729219 Msa0318620:CDS 45.0%
CTTGAGACAAGTAGCAGAGT+AGG - chr2_4:17729234-17729253 None:intergenic 45.0%
GAGCAAGAGGTAAAATGACC+TGG - chr2_4:17729307-17729326 None:intergenic 45.0%
CCTCTATACAAACAACCTCC+AGG - chr2_4:17729442-17729461 None:intergenic 45.0%
CCTGGAGGTTGTTTGTATAG+AGG + chr2_4:17729439-17729458 Msa0318620:CDS 45.0%
!! AACTTGTTGCAGCTTTGCAG+TGG + chr2_4:17729611-17729630 Msa0318620:intron 45.0%
!! TAAGAGGGCATCATCTGCAA+AGG - chr2_4:17729696-17729715 None:intergenic 45.0%
TTGAATTCTGCATCGCAGGA+CGG + chr2_4:17729844-17729863 Msa0318620:intron 45.0%
TCTAGTAATGCTCGTCCATC+TGG + chr2_4:17729904-17729923 Msa0318620:CDS 45.0%
CAATTGTAAGGACCGACCTA+AGG - chr2_4:17729957-17729976 None:intergenic 45.0%
TGTTGTGGCATCAGTTCAGA+GGG + chr2_4:17730047-17730066 Msa0318620:CDS 45.0%
!!! GTCTTTTTCAGGATGCACAC+TGG + chr2_4:17730255-17730274 Msa0318620:intron 45.0%
CAATATTGCATCACTCGCTG+CGG - chr2_4:17730304-17730323 None:intergenic 45.0%
AAGTTCTTGATGAAGCTGGC+AGG + chr2_4:17730549-17730568 Msa0318620:CDS 45.0%
CTTGATACACAAATCCCTCC+TGG - chr2_4:17730742-17730761 None:intergenic 45.0%
!! ATGGCTTGCTCATAAGACAC+TGG - chr2_4:17730775-17730794 None:intergenic 45.0%
CTTATGAGCAAGCCATTGCA+TGG + chr2_4:17730779-17730798 Msa0318620:CDS 45.0%
TCAACTGGTCCTTTGTCTGA+TGG + chr2_4:17730851-17730870 Msa0318620:CDS 45.0%
CAACTGTCTTGGATAGTCTC+AGG - chr2_4:17730962-17730981 None:intergenic 45.0%
!! ATTTATTTATAGATAAATAT+TGG + chr2_4:17726320-17726339 Msa0318620:intron 5.0%
CAGTGAAGGAGAGTAGTGTG+TGG - chr2_4:17725501-17725520 None:intergenic 50.0%
GTTGGCAGAGAGAGATGGAA+TGG - chr2_4:17725533-17725552 None:intergenic 50.0%
!! AAGGTGTTGGCAGAGAGAGA+TGG - chr2_4:17725538-17725557 None:intergenic 50.0%
TGGTGAGGTTGAAGGTGGTA+AGG - chr2_4:17725581-17725600 None:intergenic 50.0%
AAAGAGAGTGGAGGCTCTCT+TGG + chr2_4:17725610-17725629 Msa0318620:five_prime_UTR 50.0%
ACTACGTATCCGGGCTTCAT+AGG - chr2_4:17726793-17726812 None:intergenic 50.0%
CCGTATCACACTACGTATCC+GGG - chr2_4:17726802-17726821 None:intergenic 50.0%
CCCGGATACGTAGTGTGATA+CGG + chr2_4:17726799-17726818 Msa0318620:intron 50.0%
CCCGTATCACACTACGTATC+CGG - chr2_4:17726803-17726822 None:intergenic 50.0%
CCGGATACGTAGTGTGATAC+GGG + chr2_4:17726800-17726819 Msa0318620:intron 50.0%
!! GCTGAGTTGGGTTTTGCTGT+TGG - chr2_4:17727303-17727322 None:intergenic 50.0%
GGGTTGTTTGCATCCCTTTG+AGG - chr2_4:17727328-17727347 None:intergenic 50.0%
CCTTAGATAGGAACTCTGCC+AGG - chr2_4:17727482-17727501 None:intergenic 50.0%
CCTGGCAGAGTTCCTATCTA+AGG + chr2_4:17727479-17727498 Msa0318620:CDS 50.0%
! CAGTTCCGGTAGCCTTAGAT+AGG - chr2_4:17727494-17727513 None:intergenic 50.0%
TCGACTGGGTGCAGATGATT+GGG + chr2_4:17727517-17727536 Msa0318620:CDS 50.0%
GGTGCAGATGATTGGGATGA+AGG + chr2_4:17727524-17727543 Msa0318620:CDS 50.0%
TGTCTTTGTGTAGCCTGGTC+CGG + chr2_4:17727627-17727646 Msa0318620:intron 50.0%
TAGCCTGGTCCGGAATCTAT+TGG + chr2_4:17727637-17727656 Msa0318620:intron 50.0%
CTGTTTCCCGCAACTCTAGT+GGG + chr2_4:17727668-17727687 Msa0318620:CDS 50.0%
AGCTATCCCACTAGAGTTGC+GGG - chr2_4:17727677-17727696 None:intergenic 50.0%
CAGCTATCCCACTAGAGTTG+CGG - chr2_4:17727678-17727697 None:intergenic 50.0%
!! TAGTGGGCTCTAGACTCACA+AGG - chr2_4:17727714-17727733 None:intergenic 50.0%
! TGTGAGTCTAGAGCCCACTA+AGG + chr2_4:17727714-17727733 Msa0318620:CDS 50.0%
AGTATTGTTCCCACTGGTGG+TGG + chr2_4:17727894-17727913 Msa0318620:CDS 50.0%
ATTGTACCACCACCACCAGT+GGG - chr2_4:17727906-17727925 None:intergenic 50.0%
TATTGTACCACCACCACCAG+TGG - chr2_4:17727907-17727926 None:intergenic 50.0%
GACGTATGCGCCTACAACTT+TGG + chr2_4:17728047-17728066 Msa0318620:intron 50.0%
CCTTATTAGACCTTGCGAGG+GGG + chr2_4:17728307-17728326 Msa0318620:CDS 50.0%
CTTATTAGACCTTGCGAGGG+GGG + chr2_4:17728308-17728327 Msa0318620:CDS 50.0%
GTGTTGCAATGCCTGCAAAG+TGG - chr2_4:17728605-17728624 None:intergenic 50.0%
CATGCTGCCACGATTCAATG+CGG + chr2_4:17728732-17728751 Msa0318620:intron 50.0%
CCAAATGCCGCATTGAATCG+TGG - chr2_4:17728742-17728761 None:intergenic 50.0%
CCACGATTCAATGCGGCATT+TGG + chr2_4:17728739-17728758 Msa0318620:intron 50.0%
TGGTCGTTGCTGGGAAATGA+TGG + chr2_4:17728907-17728926 Msa0318620:CDS 50.0%
!! TGAGGGAGCATCGATCAGAA+TGG + chr2_4:17729189-17729208 Msa0318620:CDS 50.0%
!! GAGGGAGCATCGATCAGAAT+GGG + chr2_4:17729190-17729209 Msa0318620:CDS 50.0%
TTGGACACGGAACTGCATAG+GGG - chr2_4:17729262-17729281 None:intergenic 50.0%
CTTGGACACGGAACTGCATA+GGG - chr2_4:17729263-17729282 None:intergenic 50.0%
TCTTGGACACGGAACTGCAT+AGG - chr2_4:17729264-17729283 None:intergenic 50.0%
GTAAAATGACCTGGCTGCTG+GGG - chr2_4:17729298-17729317 None:intergenic 50.0%
GGTAAAATGACCTGGCTGCT+GGG - chr2_4:17729299-17729318 None:intergenic 50.0%
AGGTAAAATGACCTGGCTGC+TGG - chr2_4:17729300-17729319 None:intergenic 50.0%
! TGTTGCATTGGTGCAGTTCC+TGG + chr2_4:17729421-17729440 Msa0318620:intron 50.0%
TGCCAGTGCAACATCTTCTG+GGG - chr2_4:17729477-17729496 None:intergenic 50.0%
GTGCCAGTGCAACATCTTCT+GGG - chr2_4:17729478-17729497 None:intergenic 50.0%
GATGCCCTCTTATTGCCTTC+TGG + chr2_4:17729704-17729723 Msa0318620:CDS 50.0%
AATGCTCGTCCATCTGGTGA+AGG + chr2_4:17729910-17729929 Msa0318620:CDS 50.0%
!! GGTGAAGGTGCTGGTTCAAA+CGG + chr2_4:17729925-17729944 Msa0318620:CDS 50.0%
GTCGCGCAAGTGATTCTCAA+AGG - chr2_4:17729992-17730011 None:intergenic 50.0%
GAATCACTTGCGCGACAATG+TGG + chr2_4:17729996-17730015 Msa0318620:CDS 50.0%
CCACAACACTACGCACATAC+TGG - chr2_4:17730035-17730054 None:intergenic 50.0%
CCAGTATGTGCGTAGTGTTG+TGG + chr2_4:17730032-17730051 Msa0318620:CDS 50.0%
GTGTTGTGGCATCAGTTCAG+AGG + chr2_4:17730046-17730065 Msa0318620:CDS 50.0%
ATCAGTTCAGAGGGTTGCCA+TGG + chr2_4:17730056-17730075 Msa0318620:CDS 50.0%
TTCGCCAGAAGCTCATGCTT+TGG + chr2_4:17730131-17730150 Msa0318620:CDS 50.0%
AAGCTCATGCTTTGGCACGA+TGG + chr2_4:17730139-17730158 Msa0318620:CDS 50.0%
GTTATGCATCTCTGCCAGGA+GGG + chr2_4:17730725-17730744 Msa0318620:CDS 50.0%
ACCCAACTCAGCGTCCTCAA+AGG + chr2_4:17727311-17727330 Msa0318620:CDS 55.0%
! CCCTTTGAGGACGCTGAGTT+GGG - chr2_4:17727315-17727334 None:intergenic 55.0%
CCCAACTCAGCGTCCTCAAA+GGG + chr2_4:17727312-17727331 Msa0318620:CDS 55.0%
! TCCCTTTGAGGACGCTGAGT+TGG - chr2_4:17727316-17727335 None:intergenic 55.0%
AGGGATGCAAACAACCCAGC+TGG + chr2_4:17727331-17727350 Msa0318620:CDS 55.0%
GGGATGCAAACAACCCAGCT+GGG + chr2_4:17727332-17727351 Msa0318620:CDS 55.0%
! TACCGGAACTGCTGTCGACT+GGG + chr2_4:17727503-17727522 Msa0318620:CDS 55.0%
GTCGACTGGGTGCAGATGAT+TGG + chr2_4:17727516-17727535 Msa0318620:CDS 55.0%
! GCTGTTTCCCGCAACTCTAG+TGG + chr2_4:17727667-17727686 Msa0318620:CDS 55.0%
!! ATTGTTCCCACTGGTGGTGG+TGG + chr2_4:17727897-17727916 Msa0318620:CDS 55.0%
CGTGCTGCAGCCAAAGTTGT+AGG - chr2_4:17728060-17728079 None:intergenic 55.0%
! TGGCTGCAGCACGAGACTTT+TGG + chr2_4:17728067-17728086 Msa0318620:CDS 55.0%
CTTCTACTGGTGGCCCTACA+GGG + chr2_4:17728237-17728256 Msa0318620:CDS 55.0%
TTGACGGAGAAGGCCCTGTA+GGG - chr2_4:17728253-17728272 None:intergenic 55.0%
TTTGACGGAGAAGGCCCTGT+AGG - chr2_4:17728254-17728273 None:intergenic 55.0%
CCCCCTCGCAAGGTCTAATA+AGG - chr2_4:17728310-17728329 None:intergenic 55.0%
! GGAGTGTCCCTGAAGTTCTG+AGG + chr2_4:17728463-17728482 Msa0318620:CDS 55.0%
AGAGGGGCCTCAGAACTTCA+GGG - chr2_4:17728473-17728492 None:intergenic 55.0%
TAGAGGGGCCTCAGAACTTC+AGG - chr2_4:17728474-17728493 None:intergenic 55.0%
! GATGACGGTTGGTCGTTGCT+GGG + chr2_4:17728898-17728917 Msa0318620:CDS 55.0%
AGGTGGTGTCTTGTGTGCCA+AGG + chr2_4:17729014-17729033 Msa0318620:CDS 55.0%
!! CTGCAGCAGCATTGATGCCT+TGG - chr2_4:17729034-17729053 None:intergenic 55.0%
! CAAGGCATCAATGCTGCTGC+AGG + chr2_4:17729032-17729051 Msa0318620:CDS 55.0%
TGCTCGATCGTAGGAGCAAG+AGG - chr2_4:17729320-17729339 None:intergenic 55.0%
TCCTACGATCGAGCACGAAG+AGG + chr2_4:17729325-17729344 Msa0318620:CDS 55.0%
ACCTCTTCGTGCTCGATCGT+AGG - chr2_4:17729329-17729348 None:intergenic 55.0%
! TGCATTGGTGCAGTTCCTGG+AGG + chr2_4:17729424-17729443 Msa0318620:intron 55.0%
CTCCCCAGAAGATGTTGCAC+TGG + chr2_4:17729472-17729491 Msa0318620:CDS 55.0%
CGTGCCAGTGCAACATCTTC+TGG - chr2_4:17729479-17729498 None:intergenic 55.0%
GAACCAGCACCTTCACCAGA+TGG - chr2_4:17729922-17729941 None:intergenic 55.0%
TTTGGCCCAAGCTGAGTACC+TGG - chr2_4:17730099-17730118 None:intergenic 55.0%
CTTGGGCCAAAGTCTCTTCC+TGG + chr2_4:17730108-17730127 Msa0318620:CDS 55.0%
GGCGAACCAGGAAGAGACTT+TGG - chr2_4:17730117-17730136 None:intergenic 55.0%
CGTGCCAAAGCATGAGCTTC+TGG - chr2_4:17730138-17730157 None:intergenic 55.0%
CTGGCAGAGATGCATAACCC+TGG - chr2_4:17730723-17730742 None:intergenic 55.0%
CAGGGTTATGCATCTCTGCC+AGG + chr2_4:17730721-17730740 Msa0318620:intron 55.0%
GGTTATGCATCTCTGCCAGG+AGG + chr2_4:17730724-17730743 Msa0318620:CDS 55.0%
TAGTCTTCTCGCCGTGGCTG+AGG + chr2_4:17727452-17727471 Msa0318620:intron 60.0%
CTACCGGAACTGCTGTCGAC+TGG + chr2_4:17727502-17727521 Msa0318620:CDS 60.0%
CACCCAGTCGACAGCAGTTC+CGG - chr2_4:17727508-17727527 None:intergenic 60.0%
CTCTAGACTCACAAGGCCGC+AGG - chr2_4:17727707-17727726 None:intergenic 60.0%
GCTTCTACTGGTGGCCCTAC+AGG + chr2_4:17728236-17728255 Msa0318620:CDS 60.0%
ATTAGACCTTGCGAGGGGGG+CGG + chr2_4:17728311-17728330 Msa0318620:CDS 60.0%
! CGATGACGGTTGGTCGTTGC+TGG + chr2_4:17728897-17728916 Msa0318620:CDS 60.0%
GCAGTTCCGTGTCCAAGACC+CGG + chr2_4:17729266-17729285 Msa0318620:CDS 60.0%
AAGCCACCGGGTCTTGGACA+CGG - chr2_4:17729275-17729294 None:intergenic 60.0%
! CGTCCATCTGGTGAAGGTGC+TGG + chr2_4:17729916-17729935 Msa0318620:CDS 60.0%
GCGCGACAATGTGGCTTCCA+TGG + chr2_4:17730005-17730024 Msa0318620:CDS 60.0%
ACGCACATACTGGCGAGCCA+TGG - chr2_4:17730025-17730044 None:intergenic 60.0%
CCATGGCAATTGCGCCCTCT+CGG + chr2_4:17730073-17730092 Msa0318620:CDS 60.0%
AGCTGAGTACCTGGCCGAGA+GGG - chr2_4:17730090-17730109 None:intergenic 60.0%
AAGCTGAGTACCTGGCCGAG+AGG - chr2_4:17730091-17730110 None:intergenic 60.0%
TCTCGGCCAGGTACTCAGCT+TGG + chr2_4:17730090-17730109 Msa0318620:CDS 60.0%
CTCGGCCAGGTACTCAGCTT+GGG + chr2_4:17730091-17730110 Msa0318620:CDS 60.0%
GCATGAGCTTCTGGCGAACC+AGG - chr2_4:17730129-17730148 None:intergenic 60.0%
TGCCAGGGTCTCCTCAGCCA+CGG - chr2_4:17727466-17727485 None:intergenic 65.0%
GTTCCGTGTCCAAGACCCGG+TGG + chr2_4:17729269-17729288 Msa0318620:CDS 65.0%
! CCGAGAGGGCGCAATTGCCA+TGG - chr2_4:17730076-17730095 None:intergenic 65.0%
GGGATAGCTGCGCGAGCCTG+CGG + chr2_4:17727688-17727707 Msa0318620:CDS 70.0%
ATGGATCCGCCCCCCTCGCA+AGG - chr2_4:17728320-17728339 None:intergenic 70.0%
CTGGGGAAGCCACCGGGTCT+TGG - chr2_4:17729281-17729300 None:intergenic 70.0%
TGGCTGCTGGGGAAGCCACC+GGG - chr2_4:17729287-17729306 None:intergenic 70.0%
CTGGCTGCTGGGGAAGCCAC+CGG - chr2_4:17729288-17729307 None:intergenic 70.0%
GCAATTGCGCCCTCTCGGCC+AGG + chr2_4:17730078-17730097 Msa0318620:CDS 70.0%
CGCCGTGGCTGAGGAGACCC+TGG + chr2_4:17727461-17727480 Msa0318620:CDS 75.0%
CGGTGGCTTCCCCAGCAGCC+AGG + chr2_4:17729286-17729305 Msa0318620:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 17725493 17731125 17725493 ID=Msa0318620;Name=Msa0318620
chr2_4 mRNA 17725493 17731125 17725493 ID=Msa0318620-mRNA-1;Parent=Msa0318620;Name=Msa0318620-mRNA-1;_AED=0.13;_eAED=0.13;_QI=247|1|1|1|1|1|18|255|836
chr2_4 exon 17725493 17725936 17725493 ID=Msa0318620-mRNA-1:exon:6576;Parent=Msa0318620-mRNA-1
chr2_4 exon 17726568 17726727 17726568 ID=Msa0318620-mRNA-1:exon:6577;Parent=Msa0318620-mRNA-1
chr2_4 exon 17727241 17727353 17727241 ID=Msa0318620-mRNA-1:exon:6578;Parent=Msa0318620-mRNA-1
chr2_4 exon 17727455 17727545 17727455 ID=Msa0318620-mRNA-1:exon:6579;Parent=Msa0318620-mRNA-1
chr2_4 exon 17727640 17727735 17727640 ID=Msa0318620-mRNA-1:exon:6580;Parent=Msa0318620-mRNA-1
chr2_4 exon 17727831 17727944 17727831 ID=Msa0318620-mRNA-1:exon:6581;Parent=Msa0318620-mRNA-1
chr2_4 exon 17728048 17728131 17728048 ID=Msa0318620-mRNA-1:exon:6582;Parent=Msa0318620-mRNA-1
chr2_4 exon 17728215 17728370 17728215 ID=Msa0318620-mRNA-1:exon:6583;Parent=Msa0318620-mRNA-1
chr2_4 exon 17728459 17728533 17728459 ID=Msa0318620-mRNA-1:exon:6584;Parent=Msa0318620-mRNA-1
chr2_4 exon 17728613 17728719 17728613 ID=Msa0318620-mRNA-1:exon:6585;Parent=Msa0318620-mRNA-1
chr2_4 exon 17728867 17729053 17728867 ID=Msa0318620-mRNA-1:exon:6586;Parent=Msa0318620-mRNA-1
chr2_4 exon 17729158 17729346 17729158 ID=Msa0318620-mRNA-1:exon:6587;Parent=Msa0318620-mRNA-1
chr2_4 exon 17729437 17729517 17729437 ID=Msa0318620-mRNA-1:exon:6588;Parent=Msa0318620-mRNA-1
chr2_4 exon 17729623 17729757 17729623 ID=Msa0318620-mRNA-1:exon:6589;Parent=Msa0318620-mRNA-1
chr2_4 exon 17729862 17730178 17729862 ID=Msa0318620-mRNA-1:exon:6590;Parent=Msa0318620-mRNA-1
chr2_4 exon 17730266 17730377 17730266 ID=Msa0318620-mRNA-1:exon:6591;Parent=Msa0318620-mRNA-1
chr2_4 exon 17730461 17730610 17730461 ID=Msa0318620-mRNA-1:exon:6592;Parent=Msa0318620-mRNA-1
chr2_4 exon 17730724 17731125 17730724 ID=Msa0318620-mRNA-1:exon:6593;Parent=Msa0318620-mRNA-1
chr2_4 five_prime_UTR 17725493 17725739 17725493 ID=Msa0318620-mRNA-1:five_prime_utr;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17725740 17725936 17725740 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17726568 17726727 17726568 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17727241 17727353 17727241 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17727455 17727545 17727455 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17727640 17727735 17727640 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17727831 17727944 17727831 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17728048 17728131 17728048 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17728215 17728370 17728215 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17728459 17728533 17728459 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17728613 17728719 17728613 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17728867 17729053 17728867 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17729158 17729346 17729158 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17729437 17729517 17729437 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17729623 17729757 17729623 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17729862 17730178 17729862 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17730266 17730377 17730266 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17730461 17730610 17730461 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 CDS 17730724 17730870 17730724 ID=Msa0318620-mRNA-1:cds;Parent=Msa0318620-mRNA-1
chr2_4 three_prime_UTR 17730871 17731125 17730871 ID=Msa0318620-mRNA-1:three_prime_utr;Parent=Msa0318620-mRNA-1
Gene Sequence

>Msa0318620

ATGGCACTTTCTATGCATAAAGAAATGGATGCTGGTAAATATGTAAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATTAGAGAATGTCCTATCCTTTCTAACATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACCGAAGATGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACAGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTGATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATCTGGTGTATGAAAATGGATACATGAAGCAACAGATTCATACTGCTTCTGCTGCAACTACCACAGACAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTATCTAAGGCTACCGGAACTGCTGTCGACTGGGTGCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGTATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCTGCGCGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGACTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTTCCCACTGGTGGTGGTGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACTTTGGCTGCAGCACGAGACTTTTGGACGCTGAGATATACTACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCGTTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCTCCGTCAAATTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTCCTTATTAGACCTTGCGAGGGGGGCGGATCCATTATTCATATTGTTGATCACGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTCTATGAATCGTCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCATTGCAACACATAAAACAGATAGCACAAGAATCCAGTGGAGAAATTCAGTATGGTGGCGGGCGCCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTCGATGACGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGACGTAACAATTGCTGTAAACTCGTCTCCAAACAAGTTTTTGGGGTCCAACTATTCATCAATGTTCCCAACATTTGGAGGTGGTGTCTTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGCGTTGATGCCTACTCTGCTACTTGTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTCCAAGACCCGGTGGCTTCCCCAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCACGAAGAGTTCCTGGAGGTTGTTTGTATAGAGGGACATGCATTCTCCCCAGAAGATGTTGCACTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAATTGGAGCATGTGCTCAACTTGTGTTTGCCCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTATTGCCTTCTGGTTTTCGAGTTATTCCCTTGGATCCTAAATCAGACGGTCCAACCACATCAAGAACATTGGATTTACTTGAAGGATCTAGTAATGCTCGTCCATCTGGTGAAGGTGCTGGTTCAAACGGATACAACCTTAGGTCGGTCCTTACAATTGCATTCCAATTTACCTTTGAGAATCACTTGCGCGACAATGTGGCTTCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGCATCAGTTCAGAGGGTTGCCATGGCAATTGCGCCCTCTCGGCCAGGTACTCAGCTTGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTGGCACGATGGATATCTAGAAGCTACAGGATGCACACTGGTGCCGAGCTTTTTAGAGTTGAGTCCGCAGCGAGTGATGCAATATTGAAACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGTAAAAACAAATGCATCTCCAATATTCACCTTTTCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGGTTATGCATCTCTGCCAGGAGGGATTTGTGTATCAAGTATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGATGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA
Protein sequence

>Msa0318620

MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPSNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCPRPGGFPSSQVILPLAPTIEHEEFLEVVCIEGHAFSPEDVALARDMYLLQLCSGIDENSIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPTTSRTLDLLEGSSNARPSGEGAGSNGYNLRSVLTIAFQFTFENHLRDNVASMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWISRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSVKTNASPIFTFSNQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYASLPGGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV*