Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342160 | ADD71138.1 | 97.317 | 410 | 7 | 1 | 1 | 410 | 25 | 430 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342160 | sp|Q9SJE8|ALMT2_ARATH | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.16e-141 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0342160 | 0.826378 | 2.803773e-54 | -8.615850e-47 |
| Msa0034620 | Msa0342160 | 0.817545 | 3.118737e-52 | -8.615850e-47 |
| Msa0046390 | Msa0342160 | 0.810715 | 1.004254e-50 | -8.615850e-47 |
| Msa0048950 | Msa0342160 | 0.802669 | 5.026900e-49 | -8.615850e-47 |
| Msa0059880 | Msa0342160 | 0.816512 | 5.323506e-52 | -8.615850e-47 |
| Msa0085110 | Msa0342160 | 0.801772 | 7.689541e-49 | -8.615850e-47 |
| Msa0112620 | Msa0342160 | 0.813744 | 2.191971e-51 | -8.615850e-47 |
| Msa0129850 | Msa0342160 | 0.842369 | 2.696333e-58 | -8.615850e-47 |
| Msa0143680 | Msa0342160 | 0.806865 | 6.685073e-50 | -8.615850e-47 |
| Msa0143710 | Msa0342160 | 0.827049 | 1.939030e-54 | -8.615850e-47 |
| Msa0143740 | Msa0342160 | 0.816678 | 4.886382e-52 | -8.615850e-47 |
| Msa0143770 | Msa0342160 | 0.818847 | 1.582760e-52 | -8.615850e-47 |
| Msa0150910 | Msa0342160 | 0.817066 | 3.997523e-52 | -8.615850e-47 |
| Msa0177550 | Msa0342160 | 0.838626 | 2.571430e-57 | -8.615850e-47 |
| Msa0197020 | Msa0342160 | 0.822183 | 2.714877e-53 | -8.615850e-47 |
| Msa0207640 | Msa0342160 | 0.801847 | 7.422562e-49 | -8.615850e-47 |
| Msa0259110 | Msa0342160 | 0.944683 | 1.242890e-103 | -8.615850e-47 |
| Msa0259300 | Msa0342160 | 0.918198 | 2.093703e-86 | -8.615850e-47 |
| Msa0274260 | Msa0342160 | 0.804523 | 2.073709e-49 | -8.615850e-47 |
| Msa0276580 | Msa0342160 | 0.823798 | 1.141014e-53 | -8.615850e-47 |
| Msa0316600 | Msa0342160 | 0.826851 | 2.162565e-54 | -8.615850e-47 |
| Msa0342130 | Msa0342160 | 0.948646 | 6.243900e-107 | -8.615850e-47 |
| Msa0342160 | Msa0414480 | 0.807652 | 4.553661e-50 | -8.615850e-47 |
| Msa0342160 | Msa0444250 | 0.809592 | 1.753318e-50 | -8.615850e-47 |
| Msa0342160 | Msa0464310 | 0.800246 | 1.576651e-48 | -8.615850e-47 |
| Msa0342160 | Msa0515130 | 0.818640 | 1.763674e-52 | -8.615850e-47 |
| Msa0342160 | Msa0535570 | 0.839497 | 1.529902e-57 | -8.615850e-47 |
| Msa0342160 | Msa0591490 | 0.824417 | 8.165576e-54 | -8.615850e-47 |
| Msa0342160 | Msa0631700 | 0.843811 | 1.113410e-58 | -8.615850e-47 |
| Msa0342160 | Msa0645150 | 0.839911 | 1.193555e-57 | -8.615850e-47 |
| Msa0342160 | Msa0646210 | 0.802681 | 4.998358e-49 | -8.615850e-47 |
| Msa0342160 | Msa0650310 | 0.830554 | 2.750357e-55 | -8.615850e-47 |
| Msa0342160 | Msa0650440 | 0.822088 | 2.855411e-53 | -8.615850e-47 |
| Msa0342160 | Msa0670260 | 0.813898 | 2.027391e-51 | -8.615850e-47 |
| Msa0342160 | Msa0670360 | 0.831921 | 1.269040e-55 | -8.615850e-47 |
| Msa0342160 | Msa0671490 | 0.839728 | 1.331734e-57 | -8.615850e-47 |
| Msa0342160 | Msa0671640 | 0.806522 | 7.898715e-50 | -8.615850e-47 |
| Msa0342160 | Msa0678620 | 0.813696 | 2.245738e-51 | -8.615850e-47 |
| Msa0342160 | Msa0692310 | 0.800875 | 1.174056e-48 | -8.615850e-47 |
| Msa0342160 | Msa0711240 | 0.826476 | 2.656953e-54 | -8.615850e-47 |
| Msa0342160 | Msa0777210 | 0.800439 | 1.440742e-48 | -8.615850e-47 |
| Msa0342160 | Msa0863840 | 0.801663 | 8.098040e-49 | -8.615850e-47 |
| Msa0342160 | Msa0910830 | 0.804595 | 2.003265e-49 | -8.615850e-47 |
| Msa0342160 | Msa1022510 | 0.809327 | 1.998695e-50 | -8.615850e-47 |
| Msa0342160 | Msa1026050 | 0.808188 | 3.501294e-50 | -8.615850e-47 |
| Msa0342160 | Msa1061670 | 0.839367 | 1.653002e-57 | -8.615850e-47 |
| Msa0342160 | Msa1064940 | 0.809696 | 1.665349e-50 | -8.615850e-47 |
| Msa0342160 | Msa1081610 | 0.825735 | 3.986273e-54 | -8.615850e-47 |
| Msa0342160 | Msa1087380 | 0.819260 | 1.275397e-52 | -8.615850e-47 |
| Msa0342160 | Msa1106680 | 0.806722 | 7.165221e-50 | -8.615850e-47 |
| Msa0342160 | Msa1106960 | 0.841550 | 4.440469e-58 | -8.615850e-47 |
| Msa0342160 | Msa1109880 | 0.803567 | 3.277813e-49 | -8.615850e-47 |
| Msa0342160 | Msa1109890 | 0.808094 | 3.667080e-50 | -8.615850e-47 |
| Msa0342160 | Msa1166530 | 0.801562 | 8.491099e-49 | -8.615850e-47 |
| Msa0342160 | Msa1252630 | 0.813609 | 2.346762e-51 | -8.615850e-47 |
| Msa0342160 | Msa1341030 | 0.811530 | 6.687070e-51 | -8.615850e-47 |
| Msa0342160 | Msa1355340 | 0.809579 | 1.764560e-50 | -8.615850e-47 |
| Msa0342160 | Msa1376070 | 0.809759 | 1.614621e-50 | -8.615850e-47 |
| Msa0342160 | Msa1395150 | 0.816661 | 4.928902e-52 | -8.615850e-47 |
| Msa0342160 | Msa1411550 | 0.808387 | 3.174929e-50 | -8.615850e-47 |
| Msa0342160 | Msa1421130 | 0.800346 | 1.504944e-48 | -8.615850e-47 |
| Msa0342160 | Msa1456600 | 0.800848 | 1.188622e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342160 | MtrunA17_Chr2g0321971 | 95.854 | 410 | 13 | 1 | 1 | 410 | 29 | 434 | 0.0 | 809 |
| Msa0342160 | MtrunA17_Chr7g0267471 | 51.816 | 413 | 192 | 2 | 1 | 413 | 34 | 439 | 5.76e-151 | 436 |
| Msa0342160 | MtrunA17_Chr4g0025591 | 50.116 | 431 | 192 | 4 | 8 | 422 | 40 | 463 | 1.06e-146 | 425 |
| Msa0342160 | MtrunA17_Chr2g0321961 | 46.366 | 399 | 203 | 4 | 1 | 396 | 29 | 419 | 1.12e-132 | 389 |
| Msa0342160 | MtrunA17_Chr1g0188881 | 41.050 | 419 | 220 | 4 | 9 | 409 | 52 | 461 | 3.28e-111 | 335 |
| Msa0342160 | MtrunA17_Chr1g0188871 | 43.133 | 415 | 214 | 6 | 9 | 412 | 46 | 449 | 9.60e-111 | 333 |
| Msa0342160 | MtrunA17_Chr1g0212201 | 40.432 | 324 | 189 | 2 | 3 | 325 | 35 | 355 | 1.22e-81 | 261 |
| Msa0342160 | MtrunA17_Chr7g0259731 | 36.829 | 391 | 233 | 7 | 14 | 399 | 61 | 442 | 3.78e-78 | 249 |
| Msa0342160 | MtrunA17_Chr1g0212251 | 39.873 | 316 | 187 | 1 | 10 | 325 | 38 | 350 | 3.18e-77 | 249 |
| Msa0342160 | MtrunA17_Chr4g0054741 | 40.938 | 320 | 179 | 3 | 9 | 324 | 49 | 362 | 9.68e-76 | 245 |
| Msa0342160 | MtrunA17_Chr1g0212291 | 41.956 | 317 | 180 | 2 | 9 | 324 | 38 | 351 | 4.13e-72 | 236 |
| Msa0342160 | MtrunA17_Chr6g0484691 | 38.272 | 324 | 190 | 5 | 9 | 325 | 84 | 404 | 5.63e-61 | 208 |
| Msa0342160 | MtrunA17_Chr1g0210101 | 36.254 | 331 | 190 | 7 | 6 | 325 | 110 | 430 | 2.34e-59 | 203 |
| Msa0342160 | MtrunA17_Chr8g0390931 | 35.737 | 319 | 193 | 6 | 9 | 325 | 59 | 367 | 1.70e-58 | 201 |
| Msa0342160 | MtrunA17_Chr8g0390921 | 33.435 | 329 | 197 | 6 | 9 | 325 | 60 | 378 | 6.97e-55 | 191 |
| Msa0342160 | MtrunA17_Chr5g0400471 | 37.631 | 287 | 150 | 5 | 65 | 324 | 3 | 287 | 6.29e-54 | 186 |
| Msa0342160 | MtrunA17_Chr8g0390901 | 33.091 | 275 | 163 | 5 | 63 | 325 | 9 | 274 | 3.17e-44 | 160 |
| Msa0342160 | MtrunA17_Chr4g0054771 | 34.025 | 241 | 144 | 4 | 115 | 351 | 4 | 233 | 1.08e-43 | 157 |
| Msa0342160 | MtrunA17_Chr5g0400481 | 58.621 | 58 | 24 | 0 | 10 | 67 | 58 | 115 | 4.00e-16 | 74.3 |
| Msa0342160 | MtrunA17_Chr4g0054761 | 58.462 | 65 | 27 | 0 | 9 | 73 | 49 | 113 | 8.97e-15 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342160 | AT1G08440.1 | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.20e-142 | 416 |
| Msa0342160 | AT2G27240.2 | 49.497 | 398 | 187 | 4 | 8 | 399 | 12 | 401 | 9.88e-142 | 413 |
| Msa0342160 | AT2G27240.1 | 47.381 | 420 | 189 | 4 | 8 | 399 | 12 | 427 | 7.93e-140 | 409 |
| Msa0342160 | AT1G08430.1 | 46.867 | 399 | 195 | 5 | 10 | 399 | 14 | 404 | 2.05e-139 | 408 |
| Msa0342160 | AT3G11680.2 | 48.762 | 404 | 195 | 6 | 7 | 406 | 36 | 431 | 2.23e-125 | 372 |
| Msa0342160 | AT3G11680.1 | 48.762 | 404 | 195 | 6 | 7 | 406 | 34 | 429 | 2.23e-125 | 372 |
| Msa0342160 | AT4G00910.1 | 38.515 | 431 | 237 | 4 | 4 | 410 | 53 | 479 | 2.12e-103 | 315 |
| Msa0342160 | AT4G17970.1 | 40.720 | 361 | 198 | 6 | 6 | 360 | 36 | 386 | 2.13e-86 | 274 |
| Msa0342160 | AT5G46600.1 | 38.462 | 364 | 214 | 4 | 3 | 360 | 36 | 395 | 3.03e-79 | 255 |
| Msa0342160 | AT5G46610.1 | 40.063 | 317 | 186 | 2 | 9 | 324 | 41 | 354 | 8.80e-79 | 254 |
| Msa0342160 | AT5G46610.2 | 36.593 | 317 | 173 | 3 | 9 | 324 | 41 | 330 | 3.56e-65 | 218 |
| Msa0342160 | AT5G46610.3 | 34.385 | 317 | 157 | 2 | 9 | 324 | 41 | 307 | 2.75e-60 | 204 |
| Msa0342160 | AT1G18420.1 | 34.036 | 332 | 206 | 5 | 2 | 325 | 76 | 402 | 3.99e-59 | 203 |
| Msa0342160 | AT3G18440.1 | 33.151 | 365 | 225 | 9 | 9 | 359 | 79 | 438 | 4.35e-59 | 203 |
| Msa0342160 | AT1G18420.2 | 34.259 | 324 | 200 | 5 | 10 | 325 | 1 | 319 | 9.84e-59 | 200 |
| Msa0342160 | AT1G25480.1 | 36.747 | 332 | 196 | 7 | 2 | 325 | 52 | 377 | 1.73e-57 | 197 |
| Msa0342160 | AT1G68600.1 | 36.585 | 328 | 194 | 7 | 6 | 325 | 45 | 366 | 1.81e-57 | 197 |
| Msa0342160 | AT2G17470.1 | 35.671 | 328 | 197 | 7 | 6 | 325 | 28 | 349 | 5.89e-56 | 193 |
| Msa0342160 | AT2G17470.2 | 35.671 | 328 | 197 | 7 | 6 | 325 | 50 | 371 | 8.13e-56 | 194 |
| Msa0342160 | AT4G17585.1 | 56.604 | 53 | 23 | 0 | 6 | 58 | 36 | 88 | 1.79e-13 | 68.2 |
Find 69 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATGAATGACCCTTCT+AGG | 0.191366 | 2_4:-64083642 | None:intergenic |
| ATAATTGAACCTATACTTCT+TGG | 0.239685 | 2_4:+64084423 | Msa0342160:CDS |
| GATATTGTTGCCAAGGATAT+TGG | 0.241933 | 2_4:-64085453 | None:intergenic |
| AGTTGTTAAGGAAGCCATTA+AGG | 0.268610 | 2_4:-64085522 | None:intergenic |
| TATCGGATTGATGCCCTTAA+TGG | 0.282687 | 2_4:+64085508 | Msa0342160:CDS |
| AAACCTCTCTATGATAGTTT+TGG | 0.300107 | 2_4:+64083711 | Msa0342160:CDS |
| TTGGCTGGTGTTCTTGGACT+TGG | 0.319754 | 2_4:+64084360 | Msa0342160:CDS |
| ATGAAGGCTAGATATGATTA+TGG | 0.325434 | 2_4:+64084605 | Msa0342160:CDS |
| GATAAGCACATTGCCTTGAT+AGG | 0.359354 | 2_4:-64085489 | None:intergenic |
| CTTGGAAAAGGTTTAAATAG+AGG | 0.383071 | 2_4:+64084324 | Msa0342160:CDS |
| TCATATCTAGCCTTCATTAG+AGG | 0.384146 | 2_4:-64084599 | None:intergenic |
| TTCTTGTGCCCTGTTTGGGC+TGG | 0.387615 | 2_4:+64084761 | Msa0342160:CDS |
| TATCAAGGCAATGTGCTTAT+CGG | 0.393258 | 2_4:+64085491 | Msa0342160:CDS |
| GATCATGGACCTTAGGTTTG+TGG | 0.393496 | 2_4:-64085801 | None:intergenic |
| TGGCAACAATATCAAAAGAT+TGG | 0.402570 | 2_4:+64085463 | Msa0342160:CDS |
| GTACCTTAGTGAAGTTGTTA+AGG | 0.410620 | 2_4:-64085534 | None:intergenic |
| TGGGAAAAGAAGATCCTAGA+AGG | 0.411010 | 2_4:+64083628 | Msa0342160:CDS |
| TAATTGACACTGCACAAGAT+AGG | 0.418272 | 2_4:+64084690 | Msa0342160:CDS |
| CTACTATCACTGCATGTTTG+TGG | 0.427671 | 2_4:-64086006 | None:intergenic |
| AAACTTGCCTACAGAGAATT+CGG | 0.429274 | 2_4:-64083775 | None:intergenic |
| TTGTGCCCTGTTTGGGCTGG+TGG | 0.433334 | 2_4:+64084764 | Msa0342160:CDS |
| ATTATGATTCCAAGAAGTAT+AGG | 0.433596 | 2_4:-64084432 | None:intergenic |
| AGATCACCACCAGCCCAAAC+AGG | 0.433992 | 2_4:-64084770 | None:intergenic |
| GGCTAGATATGATTATGGTT+TGG | 0.440433 | 2_4:+64084610 | Msa0342160:CDS |
| GAATCTGAAACGACCATGGC+AGG | 0.446207 | 2_4:-64085431 | None:intergenic |
| GATGTTGCAGCTGAAAGAAT+TGG | 0.448481 | 2_4:+64083608 | Msa0342160:CDS |
| GTTGTTAAGGAAGCCATTAA+GGG | 0.460812 | 2_4:-64085521 | None:intergenic |
| AGTAGCATTTGCTATTACAT+TGG | 0.462751 | 2_4:+64083668 | Msa0342160:CDS |
| GTTTCAGATTCCAATATCCT+TGG | 0.467661 | 2_4:+64085443 | Msa0342160:CDS |
| ATTAAGATGAGCATAGAAAC+AGG | 0.468944 | 2_4:+64085689 | Msa0342160:CDS |
| AATGAAGCCACGGTTACAAC+AGG | 0.480765 | 2_4:-64085866 | None:intergenic |
| TTTGAATTATTTCAGCTGCA+GGG | 0.486846 | 2_4:+64084555 | Msa0342160:intron |
| TCGATTTATACCTCTAATGA+AGG | 0.491939 | 2_4:+64084589 | Msa0342160:CDS |
| CATGATCAAAACAAAATTGT+GGG | 0.502020 | 2_4:+64085817 | Msa0342160:CDS |
| TCTATGCTCATCTTAATGCA+TGG | 0.508658 | 2_4:-64085683 | None:intergenic |
| GTGCAGTGTCAATTATCTCA+TGG | 0.511026 | 2_4:-64084682 | None:intergenic |
| GCAGGAGCAACACTTGGAAA+AGG | 0.511844 | 2_4:+64084312 | Msa0342160:intron |
| TGGACTTGGATCTTATTACA+TGG | 0.514673 | 2_4:+64084374 | Msa0342160:CDS |
| TGGTGGATTAATTTCTGTGT+TGG | 0.515117 | 2_4:+64084730 | Msa0342160:CDS |
| GTAACAACAATTCTAGTTGG+TGG | 0.515822 | 2_4:+64084713 | Msa0342160:CDS |
| CTTCCTTAACAACTTCACTA+AGG | 0.516652 | 2_4:+64085531 | Msa0342160:CDS |
| ATGTTGCAGCTGAAAGAATT+GGG | 0.527158 | 2_4:+64083609 | Msa0342160:CDS |
| TGAGTTTCTGCTGAGGTTGG+TGG | 0.528304 | 2_4:-64085755 | None:intergenic |
| AAAAGATTGGAAACCTATCA+AGG | 0.530845 | 2_4:+64085476 | Msa0342160:CDS |
| AGGGTAACAACAATTCTAGT+TGG | 0.536338 | 2_4:+64084710 | Msa0342160:CDS |
| CCATGATCAAAACAAAATTG+TGG | 0.536457 | 2_4:+64085816 | Msa0342160:CDS |
| AATTGACACTGCACAAGATA+GGG | 0.540293 | 2_4:+64084691 | Msa0342160:CDS |
| GGAAGACACAAATTTGTTTG+AGG | 0.543623 | 2_4:+64085838 | Msa0342160:CDS |
| AAAACAAGTCGAAGATAACT+TGG | 0.544545 | 2_4:+64085035 | Msa0342160:CDS |
| CTTAGCAAAATTTAAGAACA+AGG | 0.557015 | 2_4:+64085949 | Msa0342160:CDS |
| TTGAATTATTTCAGCTGCAG+GGG | 0.563412 | 2_4:+64084556 | Msa0342160:intron |
| GTTGTCTCCGAATTCTCTGT+AGG | 0.565117 | 2_4:+64083768 | Msa0342160:CDS |
| GCACATGCAGGAGCAACACT+TGG | 0.568214 | 2_4:+64084306 | Msa0342160:intron |
| ATGTGAGTTTCTGCTGAGGT+TGG | 0.568552 | 2_4:-64085758 | None:intergenic |
| GCAAGGTGGGAACCCTGCCA+TGG | 0.570019 | 2_4:+64085418 | Msa0342160:CDS |
| TCAAATAAATCATTTATGCA+AGG | 0.574471 | 2_4:+64084991 | Msa0342160:CDS |
| ATGGTTCATACAATTTCAAG+AGG | 0.574977 | 2_4:+64084393 | Msa0342160:CDS |
| AGATTTATGCCACAAACCTA+AGG | 0.581612 | 2_4:+64085792 | Msa0342160:CDS |
| ATCAAGCAATAATGAAGCCA+CGG | 0.596047 | 2_4:-64085876 | None:intergenic |
| TTAATTATAATAACATGTTG+TGG | 0.607316 | 2_4:-64086033 | None:intergenic |
| GGGAAAAGAAGATCCTAGAA+GGG | 0.628854 | 2_4:+64083629 | Msa0342160:CDS |
| GATGAGCATAGAAACAGGAA+AGG | 0.631774 | 2_4:+64085694 | Msa0342160:CDS |
| CAAACATGCAGTGATAGTAG+TGG | 0.633845 | 2_4:+64086009 | Msa0342160:CDS |
| GAACCAAAACTATCATAGAG+AGG | 0.635110 | 2_4:-64083714 | None:intergenic |
| TGCAATGTGAGTTTCTGCTG+AGG | 0.637883 | 2_4:-64085762 | None:intergenic |
| ATTGGAATCTGAAACGACCA+TGG | 0.657737 | 2_4:-64085435 | None:intergenic |
| AATCTGAAACGACCATGGCA+GGG | 0.657967 | 2_4:-64085430 | None:intergenic |
| GGTTGTTCCTGTTGTAACCG+TGG | 0.667584 | 2_4:+64085859 | Msa0342160:CDS |
| GATCACCACCAGCCCAAACA+GGG | 0.679414 | 2_4:-64084769 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTACATAGAAAAAA+TGG | + | chr2_4:64083944-64083963 | Msa0342160:intron | 10.0% |
| !!! | AATTTACAATAACATAATTT+TGG | - | chr2_4:64085075-64085094 | None:intergenic | 10.0% |
| !! | TAAATATTACATAGAAAAAA+TGG | + | chr2_4:64083944-64083963 | Msa0342160:intron | 10.0% |
| !!! | AATTTACAATAACATAATTT+TGG | - | chr2_4:64085075-64085094 | None:intergenic | 10.0% |
| !!! | AATTTTGTAAATTGTGATTA+TGG | + | chr2_4:64084858-64084877 | Msa0342160:intron | 15.0% |
| !!! | AATTTTGTAAATTGTGATTA+TGG | + | chr2_4:64084858-64084877 | Msa0342160:intron | 15.0% |
| !!! | TTATTCTATGTTTCTACAAT+CGG | - | chr2_4:64084166-64084185 | None:intergenic | 20.0% |
| !!! | GAATAAATAGTATTTTGTAG+AGG | + | chr2_4:64084180-64084199 | Msa0342160:intron | 20.0% |
| !!! | TATTTGATAATTTCACTAGT+AGG | + | chr2_4:64084490-64084509 | Msa0342160:intron | 20.0% |
| !! | TCAAAAAACATTGAAAAACT+TGG | + | chr2_4:64084806-64084825 | Msa0342160:CDS | 20.0% |
| !! | TGTTGAAATTGATTAATTCT+TGG | + | chr2_4:64084917-64084936 | Msa0342160:intron | 20.0% |
| !! | ATTAATTCTTGGAAAATTGT+AGG | + | chr2_4:64084928-64084947 | Msa0342160:intron | 20.0% |
| !! | TCAAATAAATCATTTATGCA+AGG | + | chr2_4:64084991-64085010 | Msa0342160:CDS | 20.0% |
| !! | ATATATTGAGAAATATTCCA+TGG | - | chr2_4:64085124-64085143 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAATACCTTTTGT+AGG | + | chr2_4:64085387-64085406 | Msa0342160:intron | 20.0% |
| !! | ATCAATATCAATCCAAAAAA+CGG | + | chr2_4:64085730-64085749 | Msa0342160:CDS | 20.0% |
| !!! | TTATTCTATGTTTCTACAAT+CGG | - | chr2_4:64084166-64084185 | None:intergenic | 20.0% |
| !!! | GAATAAATAGTATTTTGTAG+AGG | + | chr2_4:64084180-64084199 | Msa0342160:intron | 20.0% |
| !!! | TATTTGATAATTTCACTAGT+AGG | + | chr2_4:64084490-64084509 | Msa0342160:intron | 20.0% |
| !! | TCAAAAAACATTGAAAAACT+TGG | + | chr2_4:64084806-64084825 | Msa0342160:CDS | 20.0% |
| !! | TGTTGAAATTGATTAATTCT+TGG | + | chr2_4:64084917-64084936 | Msa0342160:intron | 20.0% |
| !! | ATTAATTCTTGGAAAATTGT+AGG | + | chr2_4:64084928-64084947 | Msa0342160:intron | 20.0% |
| !! | TCAAATAAATCATTTATGCA+AGG | + | chr2_4:64084991-64085010 | Msa0342160:CDS | 20.0% |
| !! | ATATATTGAGAAATATTCCA+TGG | - | chr2_4:64085124-64085143 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAATACCTTTTGT+AGG | + | chr2_4:64085387-64085406 | Msa0342160:intron | 20.0% |
| !! | ATCAATATCAATCCAAAAAA+CGG | + | chr2_4:64085730-64085749 | Msa0342160:CDS | 20.0% |
| !!! | GTTTTGTTTGTTGTTTTCTT+TGG | + | chr2_4:64083794-64083813 | Msa0342160:intron | 25.0% |
| !!! | GTTTTAATCATGCATGTTTT+TGG | + | chr2_4:64083816-64083835 | Msa0342160:intron | 25.0% |
| ! | TAGTAGACACTAAACTTAAA+TGG | - | chr2_4:64083847-64083866 | None:intergenic | 25.0% |
| !!! | TTTTTCTCTAGTCTTAACTT+TGG | + | chr2_4:64083869-64083888 | Msa0342160:intron | 25.0% |
| ! | ATCTTAATTCCAAAAATGCA+TGG | + | chr2_4:64084041-64084060 | Msa0342160:intron | 25.0% |
| ! | ATAATTGAACCTATACTTCT+TGG | + | chr2_4:64084423-64084442 | Msa0342160:CDS | 25.0% |
| !! | ATTATGATTCCAAGAAGTAT+AGG | - | chr2_4:64084435-64084454 | None:intergenic | 25.0% |
| !! | GTTTATCTTGACATTTTGTT+TGG | + | chr2_4:64084637-64084656 | Msa0342160:CDS | 25.0% |
| ! | TCTACTACGATTTACATATA+CGG | + | chr2_4:64085307-64085326 | Msa0342160:intron | 25.0% |
| !! | AAGTTTAGTAGAGTATTTCT+TGG | + | chr2_4:64085582-64085601 | Msa0342160:intron | 25.0% |
| !!! | ACTTTTTTTATAGACACCAA+AGG | + | chr2_4:64085637-64085656 | Msa0342160:intron | 25.0% |
| !!! | ATTTTGCTTTTGATTTCCTT+TGG | - | chr2_4:64085656-64085675 | None:intergenic | 25.0% |
| ! | CATGATCAAAACAAAATTGT+GGG | + | chr2_4:64085817-64085836 | Msa0342160:CDS | 25.0% |
| !! | CTTGTTCTTAAATTTTGCTA+AGG | - | chr2_4:64085951-64085970 | None:intergenic | 25.0% |
| ! | CTTAGCAAAATTTAAGAACA+AGG | + | chr2_4:64085949-64085968 | Msa0342160:CDS | 25.0% |
| !!! | GTTTTGTTTGTTGTTTTCTT+TGG | + | chr2_4:64083794-64083813 | Msa0342160:intron | 25.0% |
| !!! | GTTTTAATCATGCATGTTTT+TGG | + | chr2_4:64083816-64083835 | Msa0342160:intron | 25.0% |
| ! | TAGTAGACACTAAACTTAAA+TGG | - | chr2_4:64083847-64083866 | None:intergenic | 25.0% |
| !!! | TTTTTCTCTAGTCTTAACTT+TGG | + | chr2_4:64083869-64083888 | Msa0342160:intron | 25.0% |
| ! | ATCTTAATTCCAAAAATGCA+TGG | + | chr2_4:64084041-64084060 | Msa0342160:intron | 25.0% |
| ! | ATAATTGAACCTATACTTCT+TGG | + | chr2_4:64084423-64084442 | Msa0342160:CDS | 25.0% |
| !! | ATTATGATTCCAAGAAGTAT+AGG | - | chr2_4:64084435-64084454 | None:intergenic | 25.0% |
| !! | GTTTATCTTGACATTTTGTT+TGG | + | chr2_4:64084637-64084656 | Msa0342160:CDS | 25.0% |
| ! | TCTACTACGATTTACATATA+CGG | + | chr2_4:64085307-64085326 | Msa0342160:intron | 25.0% |
| !! | AAGTTTAGTAGAGTATTTCT+TGG | + | chr2_4:64085582-64085601 | Msa0342160:intron | 25.0% |
| !!! | ACTTTTTTTATAGACACCAA+AGG | + | chr2_4:64085637-64085656 | Msa0342160:intron | 25.0% |
| !!! | ATTTTGCTTTTGATTTCCTT+TGG | - | chr2_4:64085656-64085675 | None:intergenic | 25.0% |
| ! | CATGATCAAAACAAAATTGT+GGG | + | chr2_4:64085817-64085836 | Msa0342160:CDS | 25.0% |
| !! | CTTGTTCTTAAATTTTGCTA+AGG | - | chr2_4:64085951-64085970 | None:intergenic | 25.0% |
| ! | CTTAGCAAAATTTAAGAACA+AGG | + | chr2_4:64085949-64085968 | Msa0342160:CDS | 25.0% |
| !! | AGTAGCATTTGCTATTACAT+TGG | + | chr2_4:64083668-64083687 | Msa0342160:CDS | 30.0% |
| ! | AAACCTCTCTATGATAGTTT+TGG | + | chr2_4:64083711-64083730 | Msa0342160:CDS | 30.0% |
| !! | CATATTATTTTGCCACTTGT+TGG | + | chr2_4:64083904-64083923 | Msa0342160:intron | 30.0% |
| TTAATTCCAAAAATGCATGG+TGG | + | chr2_4:64084044-64084063 | Msa0342160:intron | 30.0% | |
| !!! | ATCGGTCATAGATTTTTTTG+TGG | - | chr2_4:64084148-64084167 | None:intergenic | 30.0% |
| !! | ATGCGAACTTGAATTTTAAC+TGG | + | chr2_4:64084260-64084279 | Msa0342160:intron | 30.0% |
| CTTGGAAAAGGTTTAAATAG+AGG | + | chr2_4:64084324-64084343 | Msa0342160:CDS | 30.0% | |
| ! | TAGAGGTTTAGCAACATTTT+TGG | + | chr2_4:64084341-64084360 | Msa0342160:CDS | 30.0% |
| ATGGTTCATACAATTTCAAG+AGG | + | chr2_4:64084393-64084412 | Msa0342160:CDS | 30.0% | |
| ! | TTTTGAATTATTTCAGCTGC+AGG | + | chr2_4:64084554-64084573 | Msa0342160:intron | 30.0% |
| TTTGAATTATTTCAGCTGCA+GGG | + | chr2_4:64084555-64084574 | Msa0342160:intron | 30.0% | |
| TCGATTTATACCTCTAATGA+AGG | + | chr2_4:64084589-64084608 | Msa0342160:CDS | 30.0% | |
| ATGAAGGCTAGATATGATTA+TGG | + | chr2_4:64084605-64084624 | Msa0342160:CDS | 30.0% | |
| ! | AAACTTGGCAACTTTTTAGA+AGG | + | chr2_4:64084821-64084840 | Msa0342160:CDS | 30.0% |
| ! | TCTTGGAAAATTGTAGGTTT+TGG | + | chr2_4:64084934-64084953 | Msa0342160:intron | 30.0% |
| !!! | GGTTTTGGAGATGAATATTT+TGG | + | chr2_4:64084949-64084968 | Msa0342160:intron | 30.0% |
| AAAACAAGTCGAAGATAACT+TGG | + | chr2_4:64085035-64085054 | Msa0342160:CDS | 30.0% | |
| TCATCAAATCAAAATGTCCA+TGG | + | chr2_4:64085104-64085123 | Msa0342160:intron | 30.0% | |
| TCAAATATGTTGAAAAGTCG+TGG | - | chr2_4:64085279-64085298 | None:intergenic | 30.0% | |
| CTACTACGATTTACATATAC+GGG | + | chr2_4:64085308-64085327 | Msa0342160:intron | 30.0% | |
| TTGCAAAATTGACCTACAAA+AGG | - | chr2_4:64085402-64085421 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGTCAATTTTGCA+AGG | + | chr2_4:64085401-64085420 | Msa0342160:intron | 30.0% |
| ! | ATCTTTTGATATTGTTGCCA+AGG | - | chr2_4:64085463-64085482 | None:intergenic | 30.0% |
| TGGCAACAATATCAAAAGAT+TGG | + | chr2_4:64085463-64085482 | Msa0342160:CDS | 30.0% | |
| AAAAGATTGGAAACCTATCA+AGG | + | chr2_4:64085476-64085495 | Msa0342160:CDS | 30.0% | |
| ATTAAGATGAGCATAGAAAC+AGG | + | chr2_4:64085689-64085708 | Msa0342160:CDS | 30.0% | |
| !!! | CCACAATTTTGTTTTGATCA+TGG | - | chr2_4:64085819-64085838 | None:intergenic | 30.0% |
| CCATGATCAAAACAAAATTG+TGG | + | chr2_4:64085816-64085835 | Msa0342160:CDS | 30.0% | |
| ! | GTTCTTAAATTTTGCTAAGG+TGG | - | chr2_4:64085948-64085967 | None:intergenic | 30.0% |
| !! | AGTAGCATTTGCTATTACAT+TGG | + | chr2_4:64083668-64083687 | Msa0342160:CDS | 30.0% |
| ! | AAACCTCTCTATGATAGTTT+TGG | + | chr2_4:64083711-64083730 | Msa0342160:CDS | 30.0% |
| !! | CATATTATTTTGCCACTTGT+TGG | + | chr2_4:64083904-64083923 | Msa0342160:intron | 30.0% |
| TTAATTCCAAAAATGCATGG+TGG | + | chr2_4:64084044-64084063 | Msa0342160:intron | 30.0% | |
| !!! | ATCGGTCATAGATTTTTTTG+TGG | - | chr2_4:64084148-64084167 | None:intergenic | 30.0% |
| !! | ATGCGAACTTGAATTTTAAC+TGG | + | chr2_4:64084260-64084279 | Msa0342160:intron | 30.0% |
| CTTGGAAAAGGTTTAAATAG+AGG | + | chr2_4:64084324-64084343 | Msa0342160:CDS | 30.0% | |
| ! | TAGAGGTTTAGCAACATTTT+TGG | + | chr2_4:64084341-64084360 | Msa0342160:CDS | 30.0% |
| ATGGTTCATACAATTTCAAG+AGG | + | chr2_4:64084393-64084412 | Msa0342160:CDS | 30.0% | |
| ! | TTTTGAATTATTTCAGCTGC+AGG | + | chr2_4:64084554-64084573 | Msa0342160:intron | 30.0% |
| TTTGAATTATTTCAGCTGCA+GGG | + | chr2_4:64084555-64084574 | Msa0342160:intron | 30.0% | |
| TCGATTTATACCTCTAATGA+AGG | + | chr2_4:64084589-64084608 | Msa0342160:CDS | 30.0% | |
| ATGAAGGCTAGATATGATTA+TGG | + | chr2_4:64084605-64084624 | Msa0342160:CDS | 30.0% | |
| ! | AAACTTGGCAACTTTTTAGA+AGG | + | chr2_4:64084821-64084840 | Msa0342160:CDS | 30.0% |
| ! | TCTTGGAAAATTGTAGGTTT+TGG | + | chr2_4:64084934-64084953 | Msa0342160:intron | 30.0% |
| !!! | GGTTTTGGAGATGAATATTT+TGG | + | chr2_4:64084949-64084968 | Msa0342160:intron | 30.0% |
| AAAACAAGTCGAAGATAACT+TGG | + | chr2_4:64085035-64085054 | Msa0342160:CDS | 30.0% | |
| TCATCAAATCAAAATGTCCA+TGG | + | chr2_4:64085104-64085123 | Msa0342160:intron | 30.0% | |
| TCAAATATGTTGAAAAGTCG+TGG | - | chr2_4:64085279-64085298 | None:intergenic | 30.0% | |
| CTACTACGATTTACATATAC+GGG | + | chr2_4:64085308-64085327 | Msa0342160:intron | 30.0% | |
| TTGCAAAATTGACCTACAAA+AGG | - | chr2_4:64085402-64085421 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGTCAATTTTGCA+AGG | + | chr2_4:64085401-64085420 | Msa0342160:intron | 30.0% |
| ! | ATCTTTTGATATTGTTGCCA+AGG | - | chr2_4:64085463-64085482 | None:intergenic | 30.0% |
| TGGCAACAATATCAAAAGAT+TGG | + | chr2_4:64085463-64085482 | Msa0342160:CDS | 30.0% | |
| AAAAGATTGGAAACCTATCA+AGG | + | chr2_4:64085476-64085495 | Msa0342160:CDS | 30.0% | |
| ATTAAGATGAGCATAGAAAC+AGG | + | chr2_4:64085689-64085708 | Msa0342160:CDS | 30.0% | |
| !!! | CCACAATTTTGTTTTGATCA+TGG | - | chr2_4:64085819-64085838 | None:intergenic | 30.0% |
| CCATGATCAAAACAAAATTG+TGG | + | chr2_4:64085816-64085835 | Msa0342160:CDS | 30.0% | |
| ! | GTTCTTAAATTTTGCTAAGG+TGG | - | chr2_4:64085948-64085967 | None:intergenic | 30.0% |
| ATGTTGCAGCTGAAAGAATT+GGG | + | chr2_4:64083609-64083628 | Msa0342160:CDS | 35.0% | |
| AAAGAATGAATGACCCTTCT+AGG | - | chr2_4:64083645-64083664 | None:intergenic | 35.0% | |
| GAACCAAAACTATCATAGAG+AGG | - | chr2_4:64083717-64083736 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTCTGCAATGT+GGG | + | chr2_4:64083728-64083747 | Msa0342160:CDS | 35.0% |
| AAACTTGCCTACAGAGAATT+CGG | - | chr2_4:64083778-64083797 | None:intergenic | 35.0% | |
| TATGATCTTGATCCAACAAG+TGG | - | chr2_4:64083919-64083938 | None:intergenic | 35.0% | |
| CTTGTTGGATCAAGATCATA+CGG | + | chr2_4:64083919-64083938 | Msa0342160:intron | 35.0% | |
| TTGTGGACATACGTAAATGT+TGG | - | chr2_4:64084131-64084150 | None:intergenic | 35.0% | |
| !!! | CGAACTTGAATTTTAACTGG+TGG | + | chr2_4:64084263-64084282 | Msa0342160:intron | 35.0% |
| TTTGATTATGTTGCACATGC+AGG | + | chr2_4:64084294-64084313 | Msa0342160:intron | 35.0% | |
| TGGACTTGGATCTTATTACA+TGG | + | chr2_4:64084374-64084393 | Msa0342160:CDS | 35.0% | |
| TTGAATTATTTCAGCTGCAG+GGG | + | chr2_4:64084556-64084575 | Msa0342160:intron | 35.0% | |
| ! | TCATATCTAGCCTTCATTAG+AGG | - | chr2_4:64084602-64084621 | None:intergenic | 35.0% |
| GGCTAGATATGATTATGGTT+TGG | + | chr2_4:64084610-64084629 | Msa0342160:CDS | 35.0% | |
| TAATTGACACTGCACAAGAT+AGG | + | chr2_4:64084690-64084709 | Msa0342160:CDS | 35.0% | |
| AATTGACACTGCACAAGATA+GGG | + | chr2_4:64084691-64084710 | Msa0342160:CDS | 35.0% | |
| AGGGTAACAACAATTCTAGT+TGG | + | chr2_4:64084710-64084729 | Msa0342160:CDS | 35.0% | |
| ! | GTAACAACAATTCTAGTTGG+TGG | + | chr2_4:64084713-64084732 | Msa0342160:CDS | 35.0% |
| !! | TGGTGGATTAATTTCTGTGT+TGG | + | chr2_4:64084730-64084749 | Msa0342160:CDS | 35.0% |
| !!! | TATTTTGGAACACTAGATGC+TGG | + | chr2_4:64084964-64084983 | Msa0342160:CDS | 35.0% |
| AGACATGTCAATGTTCAACT+AGG | - | chr2_4:64085178-64085197 | None:intergenic | 35.0% | |
| ! | TGTCTCCAATTTAGTTCATG+TGG | + | chr2_4:64085193-64085212 | Msa0342160:intron | 35.0% |
| ! | GTCTCCAATTTAGTTCATGT+GGG | + | chr2_4:64085194-64085213 | Msa0342160:intron | 35.0% |
| ! | TCTCCAATTTAGTTCATGTG+GGG | + | chr2_4:64085195-64085214 | Msa0342160:intron | 35.0% |
| TAAGTCAGAGTAGACAAAGA+CGG | - | chr2_4:64085364-64085383 | None:intergenic | 35.0% | |
| GTTTCAGATTCCAATATCCT+TGG | + | chr2_4:64085443-64085462 | Msa0342160:CDS | 35.0% | |
| GATATTGTTGCCAAGGATAT+TGG | - | chr2_4:64085456-64085475 | None:intergenic | 35.0% | |
| TATCAAGGCAATGTGCTTAT+CGG | + | chr2_4:64085491-64085510 | Msa0342160:CDS | 35.0% | |
| GTTGTTAAGGAAGCCATTAA+GGG | - | chr2_4:64085524-64085543 | None:intergenic | 35.0% | |
| AGTTGTTAAGGAAGCCATTA+AGG | - | chr2_4:64085525-64085544 | None:intergenic | 35.0% | |
| CTTCCTTAACAACTTCACTA+AGG | + | chr2_4:64085531-64085550 | Msa0342160:CDS | 35.0% | |
| GTACCTTAGTGAAGTTGTTA+AGG | - | chr2_4:64085537-64085556 | None:intergenic | 35.0% | |
| TCTATGCTCATCTTAATGCA+TGG | - | chr2_4:64085686-64085705 | None:intergenic | 35.0% | |
| AGATTTATGCCACAAACCTA+AGG | + | chr2_4:64085792-64085811 | Msa0342160:CDS | 35.0% | |
| !!! | TTGTTTTGATCATGGACCTT+AGG | - | chr2_4:64085811-64085830 | None:intergenic | 35.0% |
| ! | GGAAGACACAAATTTGTTTG+AGG | + | chr2_4:64085838-64085857 | Msa0342160:CDS | 35.0% |
| ATCAAGCAATAATGAAGCCA+CGG | - | chr2_4:64085879-64085898 | None:intergenic | 35.0% | |
| !! | TGATTCTGCAAGTTTTTCAG+TGG | - | chr2_4:64085912-64085931 | None:intergenic | 35.0% |
| ATGTTGCAGCTGAAAGAATT+GGG | + | chr2_4:64083609-64083628 | Msa0342160:CDS | 35.0% | |
| AAAGAATGAATGACCCTTCT+AGG | - | chr2_4:64083645-64083664 | None:intergenic | 35.0% | |
| GAACCAAAACTATCATAGAG+AGG | - | chr2_4:64083717-64083736 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTCTGCAATGT+GGG | + | chr2_4:64083728-64083747 | Msa0342160:CDS | 35.0% |
| AAACTTGCCTACAGAGAATT+CGG | - | chr2_4:64083778-64083797 | None:intergenic | 35.0% | |
| TATGATCTTGATCCAACAAG+TGG | - | chr2_4:64083919-64083938 | None:intergenic | 35.0% | |
| CTTGTTGGATCAAGATCATA+CGG | + | chr2_4:64083919-64083938 | Msa0342160:intron | 35.0% | |
| TTGTGGACATACGTAAATGT+TGG | - | chr2_4:64084131-64084150 | None:intergenic | 35.0% | |
| !!! | CGAACTTGAATTTTAACTGG+TGG | + | chr2_4:64084263-64084282 | Msa0342160:intron | 35.0% |
| TTTGATTATGTTGCACATGC+AGG | + | chr2_4:64084294-64084313 | Msa0342160:intron | 35.0% | |
| TGGACTTGGATCTTATTACA+TGG | + | chr2_4:64084374-64084393 | Msa0342160:CDS | 35.0% | |
| TTGAATTATTTCAGCTGCAG+GGG | + | chr2_4:64084556-64084575 | Msa0342160:intron | 35.0% | |
| ! | TCATATCTAGCCTTCATTAG+AGG | - | chr2_4:64084602-64084621 | None:intergenic | 35.0% |
| GGCTAGATATGATTATGGTT+TGG | + | chr2_4:64084610-64084629 | Msa0342160:CDS | 35.0% | |
| TAATTGACACTGCACAAGAT+AGG | + | chr2_4:64084690-64084709 | Msa0342160:CDS | 35.0% | |
| AATTGACACTGCACAAGATA+GGG | + | chr2_4:64084691-64084710 | Msa0342160:CDS | 35.0% | |
| AGGGTAACAACAATTCTAGT+TGG | + | chr2_4:64084710-64084729 | Msa0342160:CDS | 35.0% | |
| ! | GTAACAACAATTCTAGTTGG+TGG | + | chr2_4:64084713-64084732 | Msa0342160:CDS | 35.0% |
| !! | TGGTGGATTAATTTCTGTGT+TGG | + | chr2_4:64084730-64084749 | Msa0342160:CDS | 35.0% |
| !!! | TATTTTGGAACACTAGATGC+TGG | + | chr2_4:64084964-64084983 | Msa0342160:CDS | 35.0% |
| AGACATGTCAATGTTCAACT+AGG | - | chr2_4:64085178-64085197 | None:intergenic | 35.0% | |
| ! | TGTCTCCAATTTAGTTCATG+TGG | + | chr2_4:64085193-64085212 | Msa0342160:intron | 35.0% |
| ! | GTCTCCAATTTAGTTCATGT+GGG | + | chr2_4:64085194-64085213 | Msa0342160:intron | 35.0% |
| ! | TCTCCAATTTAGTTCATGTG+GGG | + | chr2_4:64085195-64085214 | Msa0342160:intron | 35.0% |
| TAAGTCAGAGTAGACAAAGA+CGG | - | chr2_4:64085364-64085383 | None:intergenic | 35.0% | |
| GTTTCAGATTCCAATATCCT+TGG | + | chr2_4:64085443-64085462 | Msa0342160:CDS | 35.0% | |
| GATATTGTTGCCAAGGATAT+TGG | - | chr2_4:64085456-64085475 | None:intergenic | 35.0% | |
| TATCAAGGCAATGTGCTTAT+CGG | + | chr2_4:64085491-64085510 | Msa0342160:CDS | 35.0% | |
| GTTGTTAAGGAAGCCATTAA+GGG | - | chr2_4:64085524-64085543 | None:intergenic | 35.0% | |
| AGTTGTTAAGGAAGCCATTA+AGG | - | chr2_4:64085525-64085544 | None:intergenic | 35.0% | |
| CTTCCTTAACAACTTCACTA+AGG | + | chr2_4:64085531-64085550 | Msa0342160:CDS | 35.0% | |
| GTACCTTAGTGAAGTTGTTA+AGG | - | chr2_4:64085537-64085556 | None:intergenic | 35.0% | |
| TCTATGCTCATCTTAATGCA+TGG | - | chr2_4:64085686-64085705 | None:intergenic | 35.0% | |
| AGATTTATGCCACAAACCTA+AGG | + | chr2_4:64085792-64085811 | Msa0342160:CDS | 35.0% | |
| !!! | TTGTTTTGATCATGGACCTT+AGG | - | chr2_4:64085811-64085830 | None:intergenic | 35.0% |
| ! | GGAAGACACAAATTTGTTTG+AGG | + | chr2_4:64085838-64085857 | Msa0342160:CDS | 35.0% |
| ATCAAGCAATAATGAAGCCA+CGG | - | chr2_4:64085879-64085898 | None:intergenic | 35.0% | |
| !! | TGATTCTGCAAGTTTTTCAG+TGG | - | chr2_4:64085912-64085931 | None:intergenic | 35.0% |
| GATGTTGCAGCTGAAAGAAT+TGG | + | chr2_4:64083608-64083627 | Msa0342160:CDS | 40.0% | |
| TGGGAAAAGAAGATCCTAGA+AGG | + | chr2_4:64083628-64083647 | Msa0342160:CDS | 40.0% | |
| GGGAAAAGAAGATCCTAGAA+GGG | + | chr2_4:64083629-64083648 | Msa0342160:CDS | 40.0% | |
| !!! | GTTTTGGTTCTTCTGCAATG+TGG | + | chr2_4:64083727-64083746 | Msa0342160:CDS | 40.0% |
| TCACGCATTCAACACATTGA+TGG | - | chr2_4:64083993-64084012 | None:intergenic | 40.0% | |
| ! | TAAGTGCCACCATGCATTTT+TGG | - | chr2_4:64084053-64084072 | None:intergenic | 40.0% |
| !!! | GGTTTAGCAACATTTTTGGC+TGG | + | chr2_4:64084345-64084364 | Msa0342160:CDS | 40.0% |
| !!! | ACATTTTTGGCTGGTGTTCT+TGG | + | chr2_4:64084354-64084373 | Msa0342160:CDS | 40.0% |
| GTGCAGTGTCAATTATCTCA+TGG | - | chr2_4:64084685-64084704 | None:intergenic | 40.0% | |
| ! | ACATTTTCTTGTGCCCTGTT+TGG | + | chr2_4:64084756-64084775 | Msa0342160:CDS | 40.0% |
| ! | CATTTTCTTGTGCCCTGTTT+GGG | + | chr2_4:64084757-64084776 | Msa0342160:CDS | 40.0% |
| ! | AAGTCGAAGATAACTTGGTG+AGG | + | chr2_4:64085040-64085059 | Msa0342160:intron | 40.0% |
| AGTCCCCACATGAACTAAAT+TGG | - | chr2_4:64085201-64085220 | None:intergenic | 40.0% | |
| ! | TGTAGGTCAATTTTGCAAGG+TGG | + | chr2_4:64085404-64085423 | Msa0342160:intron | 40.0% |
| ! | GTAGGTCAATTTTGCAAGGT+GGG | + | chr2_4:64085405-64085424 | Msa0342160:intron | 40.0% |
| ! | ATTGGAATCTGAAACGACCA+TGG | - | chr2_4:64085438-64085457 | None:intergenic | 40.0% |
| GATAAGCACATTGCCTTGAT+AGG | - | chr2_4:64085492-64085511 | None:intergenic | 40.0% | |
| TATCGGATTGATGCCCTTAA+TGG | + | chr2_4:64085508-64085527 | Msa0342160:CDS | 40.0% | |
| GATGAGCATAGAAACAGGAA+AGG | + | chr2_4:64085694-64085713 | Msa0342160:CDS | 40.0% | |
| CTACTATCACTGCATGTTTG+TGG | - | chr2_4:64086009-64086028 | None:intergenic | 40.0% | |
| CAAACATGCAGTGATAGTAG+TGG | + | chr2_4:64086009-64086028 | Msa0342160:CDS | 40.0% | |
| GATGTTGCAGCTGAAAGAAT+TGG | + | chr2_4:64083608-64083627 | Msa0342160:CDS | 40.0% | |
| TGGGAAAAGAAGATCCTAGA+AGG | + | chr2_4:64083628-64083647 | Msa0342160:CDS | 40.0% | |
| GGGAAAAGAAGATCCTAGAA+GGG | + | chr2_4:64083629-64083648 | Msa0342160:CDS | 40.0% | |
| !!! | GTTTTGGTTCTTCTGCAATG+TGG | + | chr2_4:64083727-64083746 | Msa0342160:CDS | 40.0% |
| TCACGCATTCAACACATTGA+TGG | - | chr2_4:64083993-64084012 | None:intergenic | 40.0% | |
| ! | TAAGTGCCACCATGCATTTT+TGG | - | chr2_4:64084053-64084072 | None:intergenic | 40.0% |
| !!! | GGTTTAGCAACATTTTTGGC+TGG | + | chr2_4:64084345-64084364 | Msa0342160:CDS | 40.0% |
| !!! | ACATTTTTGGCTGGTGTTCT+TGG | + | chr2_4:64084354-64084373 | Msa0342160:CDS | 40.0% |
| GTGCAGTGTCAATTATCTCA+TGG | - | chr2_4:64084685-64084704 | None:intergenic | 40.0% | |
| ! | ACATTTTCTTGTGCCCTGTT+TGG | + | chr2_4:64084756-64084775 | Msa0342160:CDS | 40.0% |
| ! | CATTTTCTTGTGCCCTGTTT+GGG | + | chr2_4:64084757-64084776 | Msa0342160:CDS | 40.0% |
| ! | AAGTCGAAGATAACTTGGTG+AGG | + | chr2_4:64085040-64085059 | Msa0342160:intron | 40.0% |
| AGTCCCCACATGAACTAAAT+TGG | - | chr2_4:64085201-64085220 | None:intergenic | 40.0% | |
| ! | TGTAGGTCAATTTTGCAAGG+TGG | + | chr2_4:64085404-64085423 | Msa0342160:intron | 40.0% |
| ! | GTAGGTCAATTTTGCAAGGT+GGG | + | chr2_4:64085405-64085424 | Msa0342160:intron | 40.0% |
| ! | ATTGGAATCTGAAACGACCA+TGG | - | chr2_4:64085438-64085457 | None:intergenic | 40.0% |
| GATAAGCACATTGCCTTGAT+AGG | - | chr2_4:64085492-64085511 | None:intergenic | 40.0% | |
| TATCGGATTGATGCCCTTAA+TGG | + | chr2_4:64085508-64085527 | Msa0342160:CDS | 40.0% | |
| GATGAGCATAGAAACAGGAA+AGG | + | chr2_4:64085694-64085713 | Msa0342160:CDS | 40.0% | |
| CTACTATCACTGCATGTTTG+TGG | - | chr2_4:64086009-64086028 | None:intergenic | 40.0% | |
| CAAACATGCAGTGATAGTAG+TGG | + | chr2_4:64086009-64086028 | Msa0342160:CDS | 40.0% | |
| GTTGTCTCCGAATTCTCTGT+AGG | + | chr2_4:64083768-64083787 | Msa0342160:CDS | 45.0% | |
| !! | TTTTTAGAAGGTGCGCAAGC+AGG | + | chr2_4:64084833-64084852 | Msa0342160:CDS | 45.0% |
| ! | AATCTGAAACGACCATGGCA+GGG | - | chr2_4:64085433-64085452 | None:intergenic | 45.0% |
| !!! | AGGTTGGTGGAACCGTTTTT+TGG | - | chr2_4:64085745-64085764 | None:intergenic | 45.0% |
| ATGTGAGTTTCTGCTGAGGT+TGG | - | chr2_4:64085761-64085780 | None:intergenic | 45.0% | |
| TGCAATGTGAGTTTCTGCTG+AGG | - | chr2_4:64085765-64085784 | None:intergenic | 45.0% | |
| GATCATGGACCTTAGGTTTG+TGG | - | chr2_4:64085804-64085823 | None:intergenic | 45.0% | |
| AATGAAGCCACGGTTACAAC+AGG | - | chr2_4:64085869-64085888 | None:intergenic | 45.0% | |
| GTTGTCTCCGAATTCTCTGT+AGG | + | chr2_4:64083768-64083787 | Msa0342160:CDS | 45.0% | |
| !! | TTTTTAGAAGGTGCGCAAGC+AGG | + | chr2_4:64084833-64084852 | Msa0342160:CDS | 45.0% |
| ! | AATCTGAAACGACCATGGCA+GGG | - | chr2_4:64085433-64085452 | None:intergenic | 45.0% |
| !!! | AGGTTGGTGGAACCGTTTTT+TGG | - | chr2_4:64085745-64085764 | None:intergenic | 45.0% |
| ATGTGAGTTTCTGCTGAGGT+TGG | - | chr2_4:64085761-64085780 | None:intergenic | 45.0% | |
| TGCAATGTGAGTTTCTGCTG+AGG | - | chr2_4:64085765-64085784 | None:intergenic | 45.0% | |
| GATCATGGACCTTAGGTTTG+TGG | - | chr2_4:64085804-64085823 | None:intergenic | 45.0% | |
| AATGAAGCCACGGTTACAAC+AGG | - | chr2_4:64085869-64085888 | None:intergenic | 45.0% | |
| !! | TAAATAAATACTAAAAAAAA+TGG | - | chr2_4:64084222-64084241 | None:intergenic | 5.0% |
| !! | AAAAAAAATAAAAATTGTAT+TGG | - | chr2_4:64084537-64084556 | None:intergenic | 5.0% |
| !! | TAAATAAATACTAAAAAAAA+TGG | - | chr2_4:64084222-64084241 | None:intergenic | 5.0% |
| !! | AAAAAAAATAAAAATTGTAT+TGG | - | chr2_4:64084537-64084556 | None:intergenic | 5.0% |
| GCAGGAGCAACACTTGGAAA+AGG | + | chr2_4:64084312-64084331 | Msa0342160:intron | 50.0% | |
| TTGGCTGGTGTTCTTGGACT+TGG | + | chr2_4:64084360-64084379 | Msa0342160:CDS | 50.0% | |
| ! | GAATCTGAAACGACCATGGC+AGG | - | chr2_4:64085434-64085453 | None:intergenic | 50.0% |
| TGAGTTTCTGCTGAGGTTGG+TGG | - | chr2_4:64085758-64085777 | None:intergenic | 50.0% | |
| GGTTGTTCCTGTTGTAACCG+TGG | + | chr2_4:64085859-64085878 | Msa0342160:CDS | 50.0% | |
| GCAGGAGCAACACTTGGAAA+AGG | + | chr2_4:64084312-64084331 | Msa0342160:intron | 50.0% | |
| TTGGCTGGTGTTCTTGGACT+TGG | + | chr2_4:64084360-64084379 | Msa0342160:CDS | 50.0% | |
| ! | GAATCTGAAACGACCATGGC+AGG | - | chr2_4:64085434-64085453 | None:intergenic | 50.0% |
| TGAGTTTCTGCTGAGGTTGG+TGG | - | chr2_4:64085758-64085777 | None:intergenic | 50.0% | |
| GGTTGTTCCTGTTGTAACCG+TGG | + | chr2_4:64085859-64085878 | Msa0342160:CDS | 50.0% | |
| GCACATGCAGGAGCAACACT+TGG | + | chr2_4:64084306-64084325 | Msa0342160:intron | 55.0% | |
| TTCTTGTGCCCTGTTTGGGC+TGG | + | chr2_4:64084761-64084780 | Msa0342160:CDS | 55.0% | |
| GATCACCACCAGCCCAAACA+GGG | - | chr2_4:64084772-64084791 | None:intergenic | 55.0% | |
| AGATCACCACCAGCCCAAAC+AGG | - | chr2_4:64084773-64084792 | None:intergenic | 55.0% | |
| GCACATGCAGGAGCAACACT+TGG | + | chr2_4:64084306-64084325 | Msa0342160:intron | 55.0% | |
| TTCTTGTGCCCTGTTTGGGC+TGG | + | chr2_4:64084761-64084780 | Msa0342160:CDS | 55.0% | |
| GATCACCACCAGCCCAAACA+GGG | - | chr2_4:64084772-64084791 | None:intergenic | 55.0% | |
| AGATCACCACCAGCCCAAAC+AGG | - | chr2_4:64084773-64084792 | None:intergenic | 55.0% | |
| ! | TTGTGCCCTGTTTGGGCTGG+TGG | + | chr2_4:64084764-64084783 | Msa0342160:CDS | 60.0% |
| ! | TTGTGCCCTGTTTGGGCTGG+TGG | + | chr2_4:64084764-64084783 | Msa0342160:CDS | 60.0% |
| GCAAGGTGGGAACCCTGCCA+TGG | + | chr2_4:64085418-64085437 | Msa0342160:CDS | 65.0% | |
| GCAAGGTGGGAACCCTGCCA+TGG | + | chr2_4:64085418-64085437 | Msa0342160:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 64083600 | 64086051 | 64083600 | ID=Msa0342160;Name=Msa0342160 |
| chr2_4 | mRNA | 64083600 | 64086051 | 64083600 | ID=Msa0342160-mRNA-1;Parent=Msa0342160;Name=Msa0342160-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0|0|1|1|1|6|0|425 |
| chr2_4 | exon | 64083600 | 64083789 | 64083600 | ID=Msa0342160-mRNA-1:exon:20624;Parent=Msa0342160-mRNA-1 |
| chr2_4 | exon | 64084316 | 64084465 | 64084316 | ID=Msa0342160-mRNA-1:exon:20625;Parent=Msa0342160-mRNA-1 |
| chr2_4 | exon | 64084570 | 64084854 | 64084570 | ID=Msa0342160-mRNA-1:exon:20626;Parent=Msa0342160-mRNA-1 |
| chr2_4 | exon | 64084950 | 64085056 | 64084950 | ID=Msa0342160-mRNA-1:exon:20627;Parent=Msa0342160-mRNA-1 |
| chr2_4 | exon | 64085409 | 64085552 | 64085409 | ID=Msa0342160-mRNA-1:exon:20628;Parent=Msa0342160-mRNA-1 |
| chr2_4 | exon | 64085650 | 64086051 | 64085650 | ID=Msa0342160-mRNA-1:exon:20629;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64083600 | 64083789 | 64083600 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64084316 | 64084465 | 64084316 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64084570 | 64084854 | 64084570 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64084950 | 64085056 | 64084950 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64085409 | 64085552 | 64085409 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| chr2_4 | CDS | 64085650 | 64086051 | 64085650 | ID=Msa0342160-mRNA-1:cds;Parent=Msa0342160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
