Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342130 | ADD71138.1 | 97.664 | 428 | 6 | 1 | 1 | 428 | 25 | 448 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342130 | sp|Q9SJE8|ALMT2_ARATH | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.32e-141 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0342130 | 0.846796 | 1.734457e-59 | -8.615850e-47 |
| Msa0034620 | Msa0342130 | 0.816869 | 4.426744e-52 | -8.615850e-47 |
| Msa0034770 | Msa0342130 | 0.816258 | 6.066430e-52 | -8.615850e-47 |
| Msa0046390 | Msa0342130 | 0.821440 | 4.033803e-53 | -8.615850e-47 |
| Msa0048950 | Msa0342130 | 0.837244 | 5.826422e-57 | -8.615850e-47 |
| Msa0059880 | Msa0342130 | 0.840672 | 7.552630e-58 | -8.615850e-47 |
| Msa0085110 | Msa0342130 | 0.818303 | 2.103592e-52 | -8.615850e-47 |
| Msa0112620 | Msa0342130 | 0.847229 | 1.319845e-59 | -8.615850e-47 |
| Msa0129850 | Msa0342130 | 0.849895 | 2.410168e-60 | -8.615850e-47 |
| Msa0143680 | Msa0342130 | 0.818076 | 2.367016e-52 | -8.615850e-47 |
| Msa0143710 | Msa0342130 | 0.832800 | 7.688099e-56 | -8.615850e-47 |
| Msa0143740 | Msa0342130 | 0.822261 | 2.603235e-53 | -8.615850e-47 |
| Msa0143770 | Msa0342130 | 0.824938 | 6.152158e-54 | -8.615850e-47 |
| Msa0150910 | Msa0342130 | 0.831988 | 1.221504e-55 | -8.615850e-47 |
| Msa0155850 | Msa0342130 | 0.820232 | 7.646519e-53 | -8.615850e-47 |
| Msa0177550 | Msa0342130 | 0.852055 | 5.934508e-61 | -8.615850e-47 |
| Msa0190670 | Msa0342130 | 0.816944 | 4.259092e-52 | -8.615850e-47 |
| Msa0194230 | Msa0342130 | 0.807308 | 5.386553e-50 | -8.615850e-47 |
| Msa0197020 | Msa0342130 | 0.847076 | 1.453257e-59 | -8.615850e-47 |
| Msa0207640 | Msa0342130 | 0.808808 | 2.581904e-50 | -8.615850e-47 |
| Msa0210790 | Msa0342130 | 0.801798 | 7.597237e-49 | -8.615850e-47 |
| Msa0210850 | Msa0342130 | 0.810436 | 1.153645e-50 | -8.615850e-47 |
| Msa0259110 | Msa0342130 | 0.971414 | 3.982238e-133 | -8.615850e-47 |
| Msa0259300 | Msa0342130 | 0.937035 | 6.656038e-98 | -8.615850e-47 |
| Msa0274250 | Msa0342130 | 0.820056 | 8.391377e-53 | -8.615850e-47 |
| Msa0274260 | Msa0342130 | 0.827408 | 1.590917e-54 | -8.615850e-47 |
| Msa0276580 | Msa0342130 | 0.840373 | 9.043726e-58 | -8.615850e-47 |
| Msa0278950 | Msa0342130 | 0.803934 | 2.750077e-49 | -8.615850e-47 |
| Msa0287720 | Msa0342130 | 0.802796 | 4.732520e-49 | -8.615850e-47 |
| Msa0298270 | Msa0342130 | 0.811415 | 7.083475e-51 | -8.615850e-47 |
| Msa0314440 | Msa0342130 | 0.810355 | 1.201143e-50 | -8.615850e-47 |
| Msa0316600 | Msa0342130 | 0.841445 | 4.730955e-58 | -8.615850e-47 |
| Msa0342130 | Msa0342160 | 0.948646 | 6.243900e-107 | -8.615850e-47 |
| Msa0342130 | Msa0346170 | 0.805664 | 1.196578e-49 | -8.615850e-47 |
| Msa0342130 | Msa0349910 | 0.807883 | 4.066416e-50 | -8.615850e-47 |
| Msa0342130 | Msa0366510 | 0.821352 | 4.226482e-53 | -8.615850e-47 |
| Msa0342130 | Msa0374040 | 0.824525 | 7.699422e-54 | -8.615850e-47 |
| Msa0342130 | Msa0396700 | 0.806463 | 8.126046e-50 | -8.615850e-47 |
| Msa0342130 | Msa0414480 | 0.836794 | 7.593497e-57 | -8.615850e-47 |
| Msa0342130 | Msa0418160 | 0.810372 | 1.190929e-50 | -8.615850e-47 |
| Msa0342130 | Msa0444250 | 0.821061 | 4.933424e-53 | -8.615850e-47 |
| Msa0342130 | Msa0464310 | 0.816706 | 4.814894e-52 | -8.615850e-47 |
| Msa0342130 | Msa0491770 | 0.811283 | 7.566290e-51 | -8.615850e-47 |
| Msa0342130 | Msa0491800 | 0.807429 | 5.077184e-50 | -8.615850e-47 |
| Msa0342130 | Msa0515130 | 0.835782 | 1.372983e-56 | -8.615850e-47 |
| Msa0342130 | Msa0515150 | 0.801093 | 1.059605e-48 | -8.615850e-47 |
| Msa0342130 | Msa0529420 | 0.800801 | 1.215240e-48 | -8.615850e-47 |
| Msa0342130 | Msa0535570 | 0.854670 | 1.054421e-61 | -8.615850e-47 |
| Msa0342130 | Msa0538440 | 0.828153 | 1.052966e-54 | -8.615850e-47 |
| Msa0342130 | Msa0538450 | 0.815573 | 8.626533e-52 | -8.615850e-47 |
| Msa0342130 | Msa0538520 | 0.815580 | 8.594658e-52 | -8.615850e-47 |
| Msa0342130 | Msa0538530 | 0.821876 | 3.198176e-53 | -8.615850e-47 |
| Msa0342130 | Msa0548820 | 0.809898 | 1.506721e-50 | -8.615850e-47 |
| Msa0342130 | Msa0549930 | 0.808467 | 3.053593e-50 | -8.615850e-47 |
| Msa0342130 | Msa0579530 | 0.803473 | 3.428449e-49 | -8.615850e-47 |
| Msa0342130 | Msa0591040 | 0.800143 | 1.654628e-48 | -8.615850e-47 |
| Msa0342130 | Msa0591490 | 0.836586 | 8.580391e-57 | -8.615850e-47 |
| Msa0342130 | Msa0594330 | 0.814741 | 1.320003e-51 | -8.615850e-47 |
| Msa0342130 | Msa0605470 | 0.818653 | 1.752315e-52 | -8.615850e-47 |
| Msa0342130 | Msa0631700 | 0.859583 | 3.742400e-63 | -8.615850e-47 |
| Msa0342130 | Msa0634290 | 0.807459 | 5.003363e-50 | -8.615850e-47 |
| Msa0342130 | Msa0645150 | 0.856943 | 2.284609e-62 | -8.615850e-47 |
| Msa0342130 | Msa0646210 | 0.820150 | 7.983359e-53 | -8.615850e-47 |
| Msa0342130 | Msa0650310 | 0.844642 | 6.661395e-59 | -8.615850e-47 |
| Msa0342130 | Msa0650440 | 0.837913 | 3.925270e-57 | -8.615850e-47 |
| Msa0342130 | Msa0668220 | 0.802085 | 6.630355e-49 | -8.615850e-47 |
| Msa0342130 | Msa0670260 | 0.825156 | 5.465923e-54 | -8.615850e-47 |
| Msa0342130 | Msa0670360 | 0.845509 | 3.884458e-59 | -8.615850e-47 |
| Msa0342130 | Msa0671490 | 0.848984 | 4.324778e-60 | -8.615850e-47 |
| Msa0342130 | Msa0671640 | 0.821526 | 3.852730e-53 | -8.615850e-47 |
| Msa0342130 | Msa0678620 | 0.829161 | 6.009598e-55 | -8.615850e-47 |
| Msa0342130 | Msa0692310 | 0.805498 | 1.296794e-49 | -8.615850e-47 |
| Msa0342130 | Msa0711240 | 0.830771 | 2.434103e-55 | -8.615850e-47 |
| Msa0342130 | Msa0727480 | 0.822144 | 2.771947e-53 | -8.615850e-47 |
| Msa0342130 | Msa0735340 | 0.811112 | 8.239266e-51 | -8.615850e-47 |
| Msa0342130 | Msa0768670 | 0.813637 | 2.313941e-51 | -8.615850e-47 |
| Msa0342130 | Msa0777210 | 0.813232 | 2.841305e-51 | -8.615850e-47 |
| Msa0342130 | Msa0787860 | 0.811447 | 6.968284e-51 | -8.615850e-47 |
| Msa0342130 | Msa0792330 | 0.801783 | 7.648718e-49 | -8.615850e-47 |
| Msa0342130 | Msa0814350 | 0.815865 | 7.424805e-52 | -8.615850e-47 |
| Msa0342130 | Msa0816140 | 0.808724 | 2.691038e-50 | -8.615850e-47 |
| Msa0342130 | Msa0824850 | 0.812740 | 3.641530e-51 | -8.615850e-47 |
| Msa0342130 | Msa0824860 | 0.818126 | 2.306481e-52 | -8.615850e-47 |
| Msa0342130 | Msa0863840 | 0.819637 | 1.045857e-52 | -8.615850e-47 |
| Msa0342130 | Msa0863850 | 0.803833 | 2.886952e-49 | -8.615850e-47 |
| Msa0342130 | Msa0863860 | 0.806913 | 6.529134e-50 | -8.615850e-47 |
| Msa0342130 | Msa0864160 | 0.815574 | 8.621439e-52 | -8.615850e-47 |
| Msa0342130 | Msa0868820 | 0.814027 | 1.898306e-51 | -8.615850e-47 |
| Msa0342130 | Msa0883640 | 0.813625 | 2.327848e-51 | -8.615850e-47 |
| Msa0342130 | Msa0893840 | 0.801257 | 9.808402e-49 | -8.615850e-47 |
| Msa0342130 | Msa0896920 | 0.801526 | 8.637357e-49 | -8.615850e-47 |
| Msa0342130 | Msa0902340 | 0.812287 | 4.573357e-51 | -8.615850e-47 |
| Msa0342130 | Msa0910830 | 0.828002 | 1.144855e-54 | -8.615850e-47 |
| Msa0342130 | Msa0932890 | 0.818289 | 2.118104e-52 | -8.615850e-47 |
| Msa0342130 | Msa0932930 | 0.812564 | 3.978087e-51 | -8.615850e-47 |
| Msa0342130 | Msa0941120 | 0.820647 | 6.140439e-53 | -8.615850e-47 |
| Msa0342130 | Msa0960090 | 0.813532 | 2.441075e-51 | -8.615850e-47 |
| Msa0342130 | Msa0985700 | 0.816791 | 4.609276e-52 | -8.615850e-47 |
| Msa0342130 | Msa1022490 | 0.812386 | 4.352194e-51 | -8.615850e-47 |
| Msa0342130 | Msa1022510 | 0.821682 | 3.545757e-53 | -8.615850e-47 |
| Msa0342130 | Msa1024350 | 0.812106 | 5.008590e-51 | -8.615850e-47 |
| Msa0342130 | Msa1026050 | 0.830112 | 3.526748e-55 | -8.615850e-47 |
| Msa0342130 | Msa1041630 | 0.801917 | 7.181819e-49 | -8.615850e-47 |
| Msa0342130 | Msa1061670 | 0.848939 | 4.452695e-60 | -8.615850e-47 |
| Msa0342130 | Msa1064940 | 0.816955 | 4.234097e-52 | -8.615850e-47 |
| Msa0342130 | Msa1076830 | 0.807866 | 4.100696e-50 | -8.615850e-47 |
| Msa0342130 | Msa1081610 | 0.855029 | 8.295429e-62 | -8.615850e-47 |
| Msa0342130 | Msa1087370 | 0.816119 | 6.517610e-52 | -8.615850e-47 |
| Msa0342130 | Msa1087380 | 0.831254 | 1.852235e-55 | -8.615850e-47 |
| Msa0342130 | Msa1098100 | 0.815349 | 9.674782e-52 | -8.615850e-47 |
| Msa0342130 | Msa1106680 | 0.817472 | 3.239780e-52 | -8.615850e-47 |
| Msa0342130 | Msa1106960 | 0.851914 | 6.507939e-61 | -8.615850e-47 |
| Msa0342130 | Msa1109880 | 0.834033 | 3.786093e-56 | -8.615850e-47 |
| Msa0342130 | Msa1109890 | 0.831803 | 1.357155e-55 | -8.615850e-47 |
| Msa0342130 | Msa1138110 | 0.807884 | 4.063768e-50 | -8.615850e-47 |
| Msa0342130 | Msa1166530 | 0.822344 | 2.490297e-53 | -8.615850e-47 |
| Msa0342130 | Msa1170340 | 0.802848 | 4.616294e-49 | -8.615850e-47 |
| Msa0342130 | Msa1181680 | 0.801867 | 7.352791e-49 | -8.615850e-47 |
| Msa0342130 | Msa1252630 | 0.831077 | 2.048219e-55 | -8.615850e-47 |
| Msa0342130 | Msa1323030 | 0.803106 | 4.083638e-49 | -8.615850e-47 |
| Msa0342130 | Msa1341030 | 0.827537 | 1.480910e-54 | -8.615850e-47 |
| Msa0342130 | Msa1355340 | 0.818999 | 1.461881e-52 | -8.615850e-47 |
| Msa0342130 | Msa1357750 | 0.819469 | 1.142844e-52 | -8.615850e-47 |
| Msa0342130 | Msa1357840 | 0.802047 | 6.751325e-49 | -8.615850e-47 |
| Msa0342130 | Msa1376070 | 0.813255 | 2.808253e-51 | -8.615850e-47 |
| Msa0342130 | Msa1377520 | 0.802111 | 6.550783e-49 | -8.615850e-47 |
| Msa0342130 | Msa1395150 | 0.830571 | 2.725435e-55 | -8.615850e-47 |
| Msa0342130 | Msa1411550 | 0.816861 | 4.445007e-52 | -8.615850e-47 |
| Msa0342130 | Msa1421130 | 0.821867 | 3.213975e-53 | -8.615850e-47 |
| Msa0342130 | Msa1456600 | 0.824222 | 9.070598e-54 | -8.615850e-47 |
| Msa0342130 | Msa1459610 | 0.802581 | 5.241142e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342130 | MtrunA17_Chr2g0321971 | 95.794 | 428 | 14 | 1 | 1 | 428 | 29 | 452 | 0.0 | 846 |
| Msa0342130 | MtrunA17_Chr7g0267471 | 50.114 | 437 | 206 | 4 | 1 | 432 | 34 | 463 | 9.98e-150 | 434 |
| Msa0342130 | MtrunA17_Chr4g0025591 | 49.771 | 436 | 201 | 6 | 8 | 433 | 40 | 467 | 9.28e-146 | 424 |
| Msa0342130 | MtrunA17_Chr2g0321961 | 44.780 | 431 | 222 | 5 | 1 | 428 | 29 | 446 | 2.60e-134 | 394 |
| Msa0342130 | MtrunA17_Chr1g0188881 | 41.050 | 419 | 220 | 4 | 9 | 409 | 52 | 461 | 5.87e-111 | 335 |
| Msa0342130 | MtrunA17_Chr1g0188871 | 41.860 | 430 | 230 | 6 | 9 | 426 | 46 | 467 | 2.82e-110 | 333 |
| Msa0342130 | MtrunA17_Chr1g0212201 | 40.432 | 324 | 189 | 2 | 3 | 325 | 35 | 355 | 1.69e-81 | 261 |
| Msa0342130 | MtrunA17_Chr7g0259731 | 36.829 | 391 | 233 | 7 | 14 | 399 | 61 | 442 | 7.40e-78 | 248 |
| Msa0342130 | MtrunA17_Chr1g0212251 | 39.873 | 316 | 187 | 1 | 10 | 325 | 38 | 350 | 2.66e-77 | 249 |
| Msa0342130 | MtrunA17_Chr4g0054741 | 36.253 | 411 | 243 | 6 | 9 | 413 | 49 | 446 | 9.98e-76 | 246 |
| Msa0342130 | MtrunA17_Chr1g0212291 | 41.956 | 317 | 180 | 2 | 9 | 324 | 38 | 351 | 5.16e-72 | 236 |
| Msa0342130 | MtrunA17_Chr6g0484691 | 38.272 | 324 | 190 | 5 | 9 | 325 | 84 | 404 | 6.71e-61 | 208 |
| Msa0342130 | MtrunA17_Chr1g0210101 | 36.254 | 331 | 190 | 7 | 6 | 325 | 110 | 430 | 1.39e-59 | 204 |
| Msa0342130 | MtrunA17_Chr8g0390931 | 35.737 | 319 | 193 | 6 | 9 | 325 | 59 | 367 | 2.38e-58 | 201 |
| Msa0342130 | MtrunA17_Chr8g0390921 | 34.663 | 326 | 197 | 7 | 9 | 325 | 60 | 378 | 1.04e-54 | 191 |
| Msa0342130 | MtrunA17_Chr5g0400471 | 37.631 | 287 | 150 | 5 | 65 | 324 | 3 | 287 | 6.61e-54 | 186 |
| Msa0342130 | MtrunA17_Chr8g0390901 | 34.686 | 271 | 162 | 6 | 64 | 325 | 10 | 274 | 4.08e-44 | 160 |
| Msa0342130 | MtrunA17_Chr4g0054771 | 34.025 | 241 | 144 | 4 | 115 | 351 | 4 | 233 | 1.26e-43 | 157 |
| Msa0342130 | MtrunA17_Chr5g0400481 | 58.621 | 58 | 24 | 0 | 10 | 67 | 58 | 115 | 1.81e-16 | 75.5 |
| Msa0342130 | MtrunA17_Chr4g0054761 | 58.462 | 65 | 27 | 0 | 9 | 73 | 49 | 113 | 1.01e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342130 | AT1G08440.1 | 49.490 | 392 | 186 | 3 | 8 | 394 | 12 | 396 | 2.36e-142 | 416 |
| Msa0342130 | AT2G27240.2 | 49.497 | 398 | 187 | 4 | 8 | 399 | 12 | 401 | 7.00e-142 | 414 |
| Msa0342130 | AT2G27240.1 | 47.381 | 420 | 189 | 4 | 8 | 399 | 12 | 427 | 8.87e-140 | 410 |
| Msa0342130 | AT1G08430.1 | 46.867 | 399 | 195 | 5 | 10 | 399 | 14 | 404 | 2.01e-139 | 409 |
| Msa0342130 | AT3G11680.2 | 48.762 | 404 | 195 | 6 | 7 | 406 | 36 | 431 | 2.95e-125 | 372 |
| Msa0342130 | AT3G11680.1 | 48.762 | 404 | 195 | 6 | 7 | 406 | 34 | 429 | 3.80e-125 | 372 |
| Msa0342130 | AT4G00910.1 | 38.337 | 433 | 239 | 4 | 4 | 412 | 53 | 481 | 3.12e-103 | 316 |
| Msa0342130 | AT4G17970.1 | 40.720 | 361 | 198 | 6 | 6 | 360 | 36 | 386 | 1.60e-86 | 275 |
| Msa0342130 | AT5G46600.1 | 38.462 | 364 | 214 | 4 | 3 | 360 | 36 | 395 | 3.02e-79 | 255 |
| Msa0342130 | AT5G46610.1 | 39.319 | 323 | 192 | 2 | 3 | 324 | 35 | 354 | 1.01e-78 | 254 |
| Msa0342130 | AT5G46610.2 | 35.913 | 323 | 179 | 3 | 3 | 324 | 35 | 330 | 3.43e-65 | 218 |
| Msa0342130 | AT5G46610.3 | 34.385 | 317 | 157 | 2 | 9 | 324 | 41 | 307 | 2.67e-60 | 204 |
| Msa0342130 | AT3G18440.1 | 33.151 | 365 | 225 | 9 | 9 | 359 | 79 | 438 | 3.38e-59 | 204 |
| Msa0342130 | AT1G18420.1 | 34.036 | 332 | 206 | 5 | 2 | 325 | 76 | 402 | 4.35e-59 | 203 |
| Msa0342130 | AT1G18420.2 | 34.259 | 324 | 200 | 5 | 10 | 325 | 1 | 319 | 1.10e-58 | 200 |
| Msa0342130 | AT1G68600.1 | 36.585 | 328 | 194 | 7 | 6 | 325 | 45 | 366 | 1.35e-57 | 198 |
| Msa0342130 | AT1G25480.1 | 36.747 | 332 | 196 | 7 | 2 | 325 | 52 | 377 | 2.21e-57 | 198 |
| Msa0342130 | AT2G17470.1 | 35.671 | 328 | 197 | 7 | 6 | 325 | 28 | 349 | 4.14e-56 | 194 |
| Msa0342130 | AT2G17470.2 | 35.671 | 328 | 197 | 7 | 6 | 325 | 50 | 371 | 7.20e-56 | 194 |
| Msa0342130 | AT4G17585.1 | 56.604 | 53 | 23 | 0 | 6 | 58 | 36 | 88 | 1.40e-13 | 68.6 |
Find 71 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATGAATGACCCTTCT+AGG | 0.191366 | 2_4:+64059153 | None:intergenic |
| ATAATTGAACCTATACTTCT+TGG | 0.239685 | 2_4:-64058372 | Msa0342130:CDS |
| GATATTGTTGCCAAGGATAT+TGG | 0.241933 | 2_4:+64057341 | None:intergenic |
| AGTTGTTAAGGAAGCCATTA+AGG | 0.268610 | 2_4:+64057272 | None:intergenic |
| TATCGGATTGATGCCCTTAA+TGG | 0.282687 | 2_4:-64057286 | Msa0342130:CDS |
| TGTACAAAATTGACACATAA+TGG | 0.288079 | 2_4:-64056730 | Msa0342130:CDS |
| AAACCTCTCTATGATAGTTT+TGG | 0.300107 | 2_4:-64059084 | Msa0342130:CDS |
| TTGGCTGGTGTTCTTGGACT+TGG | 0.319754 | 2_4:-64058435 | Msa0342130:CDS |
| ATGAAGGCTAGATATGATTA+TGG | 0.325434 | 2_4:-64058190 | Msa0342130:CDS |
| GATAAGCACATTGCCTTGAT+AGG | 0.359354 | 2_4:+64057305 | None:intergenic |
| CTTGGAAAAGGTTTAAATAG+AGG | 0.383071 | 2_4:-64058471 | Msa0342130:CDS |
| TCATATCTAGCCTTCATTAG+AGG | 0.384146 | 2_4:+64058196 | None:intergenic |
| TTCTTGTGCCCTGTTTGGGC+TGG | 0.387615 | 2_4:-64058034 | Msa0342130:CDS |
| TATCAAGGCAATGTGCTTAT+CGG | 0.393258 | 2_4:-64057303 | Msa0342130:CDS |
| GATCATGGACCTTAGGTTTG+TGG | 0.393496 | 2_4:+64056993 | None:intergenic |
| TGGCAACAATATCAAAAGAT+TGG | 0.402570 | 2_4:-64057331 | Msa0342130:CDS |
| GTACCTTAGTGAAGTTGTTA+AGG | 0.410620 | 2_4:+64057260 | None:intergenic |
| TGGGAAAAGAAGATCCTAGA+AGG | 0.411010 | 2_4:-64059167 | Msa0342130:CDS |
| TAATTGACACTGCACAAGAT+AGG | 0.418272 | 2_4:-64058105 | Msa0342130:CDS |
| CTACTATCACTGCATGTTTG+TGG | 0.427671 | 2_4:+64056787 | None:intergenic |
| AAACTTGCCTACAGAGAATT+CGG | 0.429274 | 2_4:+64059020 | None:intergenic |
| TTGTGCCCTGTTTGGGCTGG+TGG | 0.433334 | 2_4:-64058031 | Msa0342130:CDS |
| ATTATGATTCCAAGAAGTAT+AGG | 0.433596 | 2_4:+64058363 | None:intergenic |
| AGATCACCACCAGCCCAAAC+AGG | 0.433992 | 2_4:+64058025 | None:intergenic |
| GTACAAAATTGACACATAAT+GGG | 0.436412 | 2_4:-64056729 | Msa0342130:CDS |
| GGCTAGATATGATTATGGTT+TGG | 0.440433 | 2_4:-64058185 | Msa0342130:CDS |
| GAATCTGAAACGACCATGGC+AGG | 0.446207 | 2_4:+64057363 | None:intergenic |
| GATGTTGCAGCTGAAAGAAT+TGG | 0.448481 | 2_4:-64059187 | Msa0342130:CDS |
| GTTGTTAAGGAAGCCATTAA+GGG | 0.460812 | 2_4:+64057273 | None:intergenic |
| AGTAGCATTTGCTATTACAT+TGG | 0.462751 | 2_4:-64059127 | Msa0342130:CDS |
| GTTTCAGATTCCAATATCCT+TGG | 0.467661 | 2_4:-64057351 | Msa0342130:CDS |
| ATTAAGATGAGCATAGAAAC+AGG | 0.468944 | 2_4:-64057105 | Msa0342130:CDS |
| AATGAAGCCACGGTTACAAC+AGG | 0.480765 | 2_4:+64056928 | None:intergenic |
| TTTGAATTATTTCAGCTGCA+GGG | 0.486846 | 2_4:-64058240 | Msa0342130:intron |
| TCGATTTATACCTCTAATGA+AGG | 0.491939 | 2_4:-64058206 | Msa0342130:CDS |
| CATGATCAAAACAAAATTGT+GGG | 0.502020 | 2_4:-64056977 | Msa0342130:CDS |
| TCTATGCTCATCTTAATGCA+TGG | 0.508658 | 2_4:+64057111 | None:intergenic |
| GTGCAGTGTCAATTATCTCA+TGG | 0.511026 | 2_4:+64058113 | None:intergenic |
| GCAGGAGCAACACTTGGAAA+AGG | 0.511844 | 2_4:-64058483 | Msa0342130:intron |
| TGGACTTGGATCTTATTACA+TGG | 0.514673 | 2_4:-64058421 | Msa0342130:CDS |
| TGGTGGATTAATTTCTGTGT+TGG | 0.515117 | 2_4:-64058065 | Msa0342130:CDS |
| GTAACAACAATTCTAGTTGG+TGG | 0.515822 | 2_4:-64058082 | Msa0342130:CDS |
| CTTCCTTAACAACTTCACTA+AGG | 0.516652 | 2_4:-64057263 | Msa0342130:intron |
| ATGTTGCAGCTGAAAGAATT+GGG | 0.527158 | 2_4:-64059186 | Msa0342130:CDS |
| TGAGTTTCTGCTGAGGTTGG+TGG | 0.528304 | 2_4:+64057039 | None:intergenic |
| AAAAGATTGGAAACCTATCA+AGG | 0.530845 | 2_4:-64057318 | Msa0342130:CDS |
| AGGGTAACAACAATTCTAGT+TGG | 0.536338 | 2_4:-64058085 | Msa0342130:CDS |
| CCATGATCAAAACAAAATTG+TGG | 0.536457 | 2_4:-64056978 | Msa0342130:CDS |
| AATTGACACTGCACAAGATA+GGG | 0.540293 | 2_4:-64058104 | Msa0342130:CDS |
| GGAAGACACAAATTTGTTTG+AGG | 0.543623 | 2_4:-64056956 | Msa0342130:CDS |
| AAAACAAGTCGAAGATAACT+TGG | 0.544545 | 2_4:-64057760 | Msa0342130:intron |
| CTTAGCAAAATTTAAGAACA+AGG | 0.557015 | 2_4:-64056845 | Msa0342130:CDS |
| TTGAATTATTTCAGCTGCAG+GGG | 0.563412 | 2_4:-64058239 | Msa0342130:intron |
| GTTGTCTCCGAATTCTCTGT+AGG | 0.565117 | 2_4:-64059027 | Msa0342130:intron |
| GCACATGCAGGAGCAACACT+TGG | 0.568214 | 2_4:-64058489 | Msa0342130:intron |
| ATGTGAGTTTCTGCTGAGGT+TGG | 0.568552 | 2_4:+64057036 | None:intergenic |
| GCAAGGTGGGAACCCTGCCA+TGG | 0.570019 | 2_4:-64057376 | Msa0342130:CDS |
| TCAAATAAATCATTTATGCA+AGG | 0.574471 | 2_4:-64057804 | Msa0342130:CDS |
| ATGGTTCATACAATTTCAAG+AGG | 0.574977 | 2_4:-64058402 | Msa0342130:CDS |
| AGATTTATGCCACAAACCTA+AGG | 0.581612 | 2_4:-64057002 | Msa0342130:CDS |
| ATCAAGCAATAATGAAGCCA+CGG | 0.596047 | 2_4:+64056918 | None:intergenic |
| TTAATTATAATAACATGTTG+TGG | 0.607316 | 2_4:+64056760 | None:intergenic |
| GGGAAAAGAAGATCCTAGAA+GGG | 0.628854 | 2_4:-64059166 | Msa0342130:CDS |
| GATGAGCATAGAAACAGGAA+AGG | 0.631774 | 2_4:-64057100 | Msa0342130:CDS |
| CAAACATGCAGTGATAGTAG+TGG | 0.633845 | 2_4:-64056784 | Msa0342130:CDS |
| GAACCAAAACTATCATAGAG+AGG | 0.635110 | 2_4:+64059081 | None:intergenic |
| TGCAATGTGAGTTTCTGCTG+AGG | 0.637883 | 2_4:+64057032 | None:intergenic |
| ATTGGAATCTGAAACGACCA+TGG | 0.657737 | 2_4:+64057359 | None:intergenic |
| AATCTGAAACGACCATGGCA+GGG | 0.657967 | 2_4:+64057364 | None:intergenic |
| GGTTGTTCCTGTTGTAACCG+TGG | 0.667584 | 2_4:-64056935 | Msa0342130:CDS |
| GATCACCACCAGCCCAAACA+GGG | 0.679414 | 2_4:+64058026 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTACATAGAAAAAA+TGG | - | chr2_4:64057064-64057083 | Msa0342130:CDS | 10.0% |
| !!! | AATTTACAATAACATAATTT+TGG | + | chr2_4:64058195-64058214 | None:intergenic | 10.0% |
| !!! | AATTTTGTAAATTGTGATTA+TGG | - | chr2_4:64057978-64057997 | Msa0342130:CDS | 15.0% |
| !! | TTAATTATAATAACATGTTG+TGG | + | chr2_4:64059158-64059177 | None:intergenic | 15.0% |
| !!! | TTATTCTATGTTTCTACAAT+CGG | + | chr2_4:64057286-64057305 | None:intergenic | 20.0% |
| !!! | GAATAAATAGTATTTTGTAG+AGG | - | chr2_4:64057300-64057319 | Msa0342130:CDS | 20.0% |
| !!! | TATTTGATAATTTCACTAGT+AGG | - | chr2_4:64057610-64057629 | Msa0342130:intron | 20.0% |
| !! | TCAAAAAACATTGAAAAACT+TGG | - | chr2_4:64057926-64057945 | Msa0342130:intron | 20.0% |
| !! | TGTTGAAATTGATTAATTCT+TGG | - | chr2_4:64058037-64058056 | Msa0342130:CDS | 20.0% |
| !! | ATTAATTCTTGGAAAATTGT+AGG | - | chr2_4:64058048-64058067 | Msa0342130:CDS | 20.0% |
| !! | TCAAATAAATCATTTATGCA+AGG | - | chr2_4:64058111-64058130 | Msa0342130:CDS | 20.0% |
| !! | ATATATTGAGAAATATTCCA+TGG | + | chr2_4:64058244-64058263 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAATACCTTTTGT+AGG | - | chr2_4:64058508-64058527 | Msa0342130:intron | 20.0% |
| !! | ATCAATATCAATCCAAAAAA+CGG | - | chr2_4:64058851-64058870 | Msa0342130:intron | 20.0% |
| !!! | GTTTTGTTTGTTGTTTTCTT+TGG | - | chr2_4:64056914-64056933 | Msa0342130:CDS | 25.0% |
| !!! | GTTTTAATCATGCATGTTTT+TGG | - | chr2_4:64056936-64056955 | Msa0342130:CDS | 25.0% |
| ! | TAGTAGACACTAAACTTAAA+TGG | + | chr2_4:64056967-64056986 | None:intergenic | 25.0% |
| !!! | TTTTTCTCTAGTCTTAACTT+TGG | - | chr2_4:64056989-64057008 | Msa0342130:CDS | 25.0% |
| ! | ATCTTAATTCCAAAAATGCA+TGG | - | chr2_4:64057161-64057180 | Msa0342130:intron | 25.0% |
| ! | ATAATTGAACCTATACTTCT+TGG | - | chr2_4:64057543-64057562 | Msa0342130:intron | 25.0% |
| !! | ATTATGATTCCAAGAAGTAT+AGG | + | chr2_4:64057555-64057574 | None:intergenic | 25.0% |
| !! | GTTTATCTTGACATTTTGTT+TGG | - | chr2_4:64057757-64057776 | Msa0342130:intron | 25.0% |
| ! | TCTACTACGATTTACATATA+CGG | - | chr2_4:64058428-64058447 | Msa0342130:CDS | 25.0% |
| !! | AAGTTTAGTAGAGTATTTCT+TGG | - | chr2_4:64058703-64058722 | Msa0342130:intron | 25.0% |
| !!! | ACTTTTTTTATAGACACCAA+AGG | - | chr2_4:64058758-64058777 | Msa0342130:intron | 25.0% |
| !!! | ATTTTGCTTTTGATTTCCTT+TGG | + | chr2_4:64058777-64058796 | None:intergenic | 25.0% |
| ! | CATGATCAAAACAAAATTGT+GGG | - | chr2_4:64058938-64058957 | Msa0342130:intron | 25.0% |
| !! | CTTGTTCTTAAATTTTGCTA+AGG | + | chr2_4:64059072-64059091 | None:intergenic | 25.0% |
| ! | CTTAGCAAAATTTAAGAACA+AGG | - | chr2_4:64059070-64059089 | Msa0342130:CDS | 25.0% |
| !! | TTATGTGTCAATTTTGTACA+AGG | + | chr2_4:64059185-64059204 | None:intergenic | 25.0% |
| ! | TGTACAAAATTGACACATAA+TGG | - | chr2_4:64059185-64059204 | Msa0342130:CDS | 25.0% |
| ! | GTACAAAATTGACACATAAT+GGG | - | chr2_4:64059186-64059205 | Msa0342130:CDS | 25.0% |
| !! | AGTAGCATTTGCTATTACAT+TGG | - | chr2_4:64056788-64056807 | Msa0342130:CDS | 30.0% |
| ! | AAACCTCTCTATGATAGTTT+TGG | - | chr2_4:64056831-64056850 | Msa0342130:CDS | 30.0% |
| !! | CATATTATTTTGCCACTTGT+TGG | - | chr2_4:64057024-64057043 | Msa0342130:CDS | 30.0% |
| TTAATTCCAAAAATGCATGG+TGG | - | chr2_4:64057164-64057183 | Msa0342130:intron | 30.0% | |
| !!! | ATCGGTCATAGATTTTTTTG+TGG | + | chr2_4:64057268-64057287 | None:intergenic | 30.0% |
| !! | ATGCGAACTTGAATTTTAAC+TGG | - | chr2_4:64057380-64057399 | Msa0342130:CDS | 30.0% |
| CTTGGAAAAGGTTTAAATAG+AGG | - | chr2_4:64057444-64057463 | Msa0342130:intron | 30.0% | |
| ! | TAGAGGTTTAGCAACATTTT+TGG | - | chr2_4:64057461-64057480 | Msa0342130:intron | 30.0% |
| ATGGTTCATACAATTTCAAG+AGG | - | chr2_4:64057513-64057532 | Msa0342130:intron | 30.0% | |
| ! | TTTTGAATTATTTCAGCTGC+AGG | - | chr2_4:64057674-64057693 | Msa0342130:intron | 30.0% |
| TTTGAATTATTTCAGCTGCA+GGG | - | chr2_4:64057675-64057694 | Msa0342130:intron | 30.0% | |
| TCGATTTATACCTCTAATGA+AGG | - | chr2_4:64057709-64057728 | Msa0342130:intron | 30.0% | |
| ATGAAGGCTAGATATGATTA+TGG | - | chr2_4:64057725-64057744 | Msa0342130:intron | 30.0% | |
| ! | AAACTTGGCAACTTTTTAGA+AGG | - | chr2_4:64057941-64057960 | Msa0342130:intron | 30.0% |
| ! | TCTTGGAAAATTGTAGGTTT+TGG | - | chr2_4:64058054-64058073 | Msa0342130:CDS | 30.0% |
| !!! | GGTTTTGGAGATGAATATTT+TGG | - | chr2_4:64058069-64058088 | Msa0342130:CDS | 30.0% |
| AAAACAAGTCGAAGATAACT+TGG | - | chr2_4:64058155-64058174 | Msa0342130:CDS | 30.0% | |
| TCATCAAATCAAAATGTCCA+TGG | - | chr2_4:64058224-64058243 | Msa0342130:CDS | 30.0% | |
| TCAAATATGTTGAAAAGTCG+TGG | + | chr2_4:64058400-64058419 | None:intergenic | 30.0% | |
| CTACTACGATTTACATATAC+GGG | - | chr2_4:64058429-64058448 | Msa0342130:CDS | 30.0% | |
| TTGCAAAATTGACCTACAAA+AGG | + | chr2_4:64058523-64058542 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGTCAATTTTGCA+AGG | - | chr2_4:64058522-64058541 | Msa0342130:intron | 30.0% |
| ! | ATCTTTTGATATTGTTGCCA+AGG | + | chr2_4:64058584-64058603 | None:intergenic | 30.0% |
| TGGCAACAATATCAAAAGAT+TGG | - | chr2_4:64058584-64058603 | Msa0342130:intron | 30.0% | |
| AAAAGATTGGAAACCTATCA+AGG | - | chr2_4:64058597-64058616 | Msa0342130:intron | 30.0% | |
| ATTAAGATGAGCATAGAAAC+AGG | - | chr2_4:64058810-64058829 | Msa0342130:intron | 30.0% | |
| !!! | CCACAATTTTGTTTTGATCA+TGG | + | chr2_4:64058940-64058959 | None:intergenic | 30.0% |
| CCATGATCAAAACAAAATTG+TGG | - | chr2_4:64058937-64058956 | Msa0342130:intron | 30.0% | |
| ! | GTTCTTAAATTTTGCTAAGG+TGG | + | chr2_4:64059069-64059088 | None:intergenic | 30.0% |
| ATGTTGCAGCTGAAAGAATT+GGG | - | chr2_4:64056729-64056748 | Msa0342130:CDS | 35.0% | |
| AAAGAATGAATGACCCTTCT+AGG | + | chr2_4:64056765-64056784 | None:intergenic | 35.0% | |
| GAACCAAAACTATCATAGAG+AGG | + | chr2_4:64056837-64056856 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTCTTCTGCAATGT+GGG | - | chr2_4:64056848-64056867 | Msa0342130:CDS | 35.0% |
| AAACTTGCCTACAGAGAATT+CGG | + | chr2_4:64056898-64056917 | None:intergenic | 35.0% | |
| TATGATCTTGATCCAACAAG+TGG | + | chr2_4:64057039-64057058 | None:intergenic | 35.0% | |
| CTTGTTGGATCAAGATCATA+CGG | - | chr2_4:64057039-64057058 | Msa0342130:CDS | 35.0% | |
| TTGTGGACATACGTAAATGT+TGG | + | chr2_4:64057251-64057270 | None:intergenic | 35.0% | |
| !!! | CGAACTTGAATTTTAACTGG+TGG | - | chr2_4:64057383-64057402 | Msa0342130:CDS | 35.0% |
| TTTGATTATGTTGCACATGC+AGG | - | chr2_4:64057414-64057433 | Msa0342130:intron | 35.0% | |
| TGGACTTGGATCTTATTACA+TGG | - | chr2_4:64057494-64057513 | Msa0342130:intron | 35.0% | |
| TTGAATTATTTCAGCTGCAG+GGG | - | chr2_4:64057676-64057695 | Msa0342130:intron | 35.0% | |
| ! | TCATATCTAGCCTTCATTAG+AGG | + | chr2_4:64057722-64057741 | None:intergenic | 35.0% |
| GGCTAGATATGATTATGGTT+TGG | - | chr2_4:64057730-64057749 | Msa0342130:intron | 35.0% | |
| TAATTGACACTGCACAAGAT+AGG | - | chr2_4:64057810-64057829 | Msa0342130:CDS | 35.0% | |
| AATTGACACTGCACAAGATA+GGG | - | chr2_4:64057811-64057830 | Msa0342130:CDS | 35.0% | |
| AGGGTAACAACAATTCTAGT+TGG | - | chr2_4:64057830-64057849 | Msa0342130:CDS | 35.0% | |
| ! | GTAACAACAATTCTAGTTGG+TGG | - | chr2_4:64057833-64057852 | Msa0342130:CDS | 35.0% |
| !! | TGGTGGATTAATTTCTGTGT+TGG | - | chr2_4:64057850-64057869 | Msa0342130:intron | 35.0% |
| !!! | TATTTTGGAACACTAGATGC+TGG | - | chr2_4:64058084-64058103 | Msa0342130:CDS | 35.0% |
| AGACATGTCAATGTTCAACT+AGG | + | chr2_4:64058298-64058317 | None:intergenic | 35.0% | |
| ! | TGTCTCCAATTTAGTTCATG+TGG | - | chr2_4:64058313-64058332 | Msa0342130:intron | 35.0% |
| ! | GTCTCCAATTTAGTTCATGT+GGG | - | chr2_4:64058314-64058333 | Msa0342130:intron | 35.0% |
| ! | TCTCCAATTTAGTTCATGTG+GGG | - | chr2_4:64058315-64058334 | Msa0342130:intron | 35.0% |
| TAAGTCAGAGTAGACAAAGA+CGG | + | chr2_4:64058485-64058504 | None:intergenic | 35.0% | |
| GTTTCAGATTCCAATATCCT+TGG | - | chr2_4:64058564-64058583 | Msa0342130:intron | 35.0% | |
| GATATTGTTGCCAAGGATAT+TGG | + | chr2_4:64058577-64058596 | None:intergenic | 35.0% | |
| TATCAAGGCAATGTGCTTAT+CGG | - | chr2_4:64058612-64058631 | Msa0342130:intron | 35.0% | |
| GTTGTTAAGGAAGCCATTAA+GGG | + | chr2_4:64058645-64058664 | None:intergenic | 35.0% | |
| AGTTGTTAAGGAAGCCATTA+AGG | + | chr2_4:64058646-64058665 | None:intergenic | 35.0% | |
| CTTCCTTAACAACTTCACTA+AGG | - | chr2_4:64058652-64058671 | Msa0342130:intron | 35.0% | |
| GTACCTTAGTGAAGTTGTTA+AGG | + | chr2_4:64058658-64058677 | None:intergenic | 35.0% | |
| TCTATGCTCATCTTAATGCA+TGG | + | chr2_4:64058807-64058826 | None:intergenic | 35.0% | |
| AGATTTATGCCACAAACCTA+AGG | - | chr2_4:64058913-64058932 | Msa0342130:intron | 35.0% | |
| !!! | TTGTTTTGATCATGGACCTT+AGG | + | chr2_4:64058932-64058951 | None:intergenic | 35.0% |
| ! | GGAAGACACAAATTTGTTTG+AGG | - | chr2_4:64058959-64058978 | Msa0342130:intron | 35.0% |
| ATCAAGCAATAATGAAGCCA+CGG | + | chr2_4:64059000-64059019 | None:intergenic | 35.0% | |
| !! | TGATTCTGCAAGTTTTTCAG+TGG | + | chr2_4:64059033-64059052 | None:intergenic | 35.0% |
| GATGTTGCAGCTGAAAGAAT+TGG | - | chr2_4:64056728-64056747 | Msa0342130:CDS | 40.0% | |
| TGGGAAAAGAAGATCCTAGA+AGG | - | chr2_4:64056748-64056767 | Msa0342130:CDS | 40.0% | |
| GGGAAAAGAAGATCCTAGAA+GGG | - | chr2_4:64056749-64056768 | Msa0342130:CDS | 40.0% | |
| !!! | GTTTTGGTTCTTCTGCAATG+TGG | - | chr2_4:64056847-64056866 | Msa0342130:CDS | 40.0% |
| TCACGCATTCAACACATTGA+TGG | + | chr2_4:64057113-64057132 | None:intergenic | 40.0% | |
| ! | TAAGTGCCACCATGCATTTT+TGG | + | chr2_4:64057173-64057192 | None:intergenic | 40.0% |
| !!! | GGTTTAGCAACATTTTTGGC+TGG | - | chr2_4:64057465-64057484 | Msa0342130:intron | 40.0% |
| !!! | ACATTTTTGGCTGGTGTTCT+TGG | - | chr2_4:64057474-64057493 | Msa0342130:intron | 40.0% |
| GTGCAGTGTCAATTATCTCA+TGG | + | chr2_4:64057805-64057824 | None:intergenic | 40.0% | |
| ! | ACATTTTCTTGTGCCCTGTT+TGG | - | chr2_4:64057876-64057895 | Msa0342130:intron | 40.0% |
| ! | CATTTTCTTGTGCCCTGTTT+GGG | - | chr2_4:64057877-64057896 | Msa0342130:intron | 40.0% |
| ! | AAGTCGAAGATAACTTGGTG+AGG | - | chr2_4:64058160-64058179 | Msa0342130:CDS | 40.0% |
| AGTCCCCACATGAACTAAAT+TGG | + | chr2_4:64058321-64058340 | None:intergenic | 40.0% | |
| ! | TGTAGGTCAATTTTGCAAGG+TGG | - | chr2_4:64058525-64058544 | Msa0342130:intron | 40.0% |
| ! | GTAGGTCAATTTTGCAAGGT+GGG | - | chr2_4:64058526-64058545 | Msa0342130:intron | 40.0% |
| ! | ATTGGAATCTGAAACGACCA+TGG | + | chr2_4:64058559-64058578 | None:intergenic | 40.0% |
| GATAAGCACATTGCCTTGAT+AGG | + | chr2_4:64058613-64058632 | None:intergenic | 40.0% | |
| TATCGGATTGATGCCCTTAA+TGG | - | chr2_4:64058629-64058648 | Msa0342130:intron | 40.0% | |
| GATGAGCATAGAAACAGGAA+AGG | - | chr2_4:64058815-64058834 | Msa0342130:intron | 40.0% | |
| CTACTATCACTGCATGTTTG+TGG | + | chr2_4:64059131-64059150 | None:intergenic | 40.0% | |
| CAAACATGCAGTGATAGTAG+TGG | - | chr2_4:64059131-64059150 | Msa0342130:CDS | 40.0% | |
| ! | GTGTCAATTTTGTACAAGGC+TGG | + | chr2_4:64059181-64059200 | None:intergenic | 40.0% |
| GTTGTCTCCGAATTCTCTGT+AGG | - | chr2_4:64056888-64056907 | Msa0342130:CDS | 45.0% | |
| !! | TTTTTAGAAGGTGCGCAAGC+AGG | - | chr2_4:64057953-64057972 | Msa0342130:intron | 45.0% |
| ! | AATCTGAAACGACCATGGCA+GGG | + | chr2_4:64058554-64058573 | None:intergenic | 45.0% |
| !!! | AGGTTGGTGGAACCGTTTTT+TGG | + | chr2_4:64058866-64058885 | None:intergenic | 45.0% |
| ATGTGAGTTTCTGCTGAGGT+TGG | + | chr2_4:64058882-64058901 | None:intergenic | 45.0% | |
| TGCAATGTGAGTTTCTGCTG+AGG | + | chr2_4:64058886-64058905 | None:intergenic | 45.0% | |
| GATCATGGACCTTAGGTTTG+TGG | + | chr2_4:64058925-64058944 | None:intergenic | 45.0% | |
| AATGAAGCCACGGTTACAAC+AGG | + | chr2_4:64058990-64059009 | None:intergenic | 45.0% | |
| !! | TAAATAAATACTAAAAAAAA+TGG | + | chr2_4:64057342-64057361 | None:intergenic | 5.0% |
| !! | AAAAAAAATAAAAATTGTAT+TGG | + | chr2_4:64057657-64057676 | None:intergenic | 5.0% |
| GCAGGAGCAACACTTGGAAA+AGG | - | chr2_4:64057432-64057451 | Msa0342130:intron | 50.0% | |
| TTGGCTGGTGTTCTTGGACT+TGG | - | chr2_4:64057480-64057499 | Msa0342130:intron | 50.0% | |
| ! | GAATCTGAAACGACCATGGC+AGG | + | chr2_4:64058555-64058574 | None:intergenic | 50.0% |
| TGAGTTTCTGCTGAGGTTGG+TGG | + | chr2_4:64058879-64058898 | None:intergenic | 50.0% | |
| GGTTGTTCCTGTTGTAACCG+TGG | - | chr2_4:64058980-64058999 | Msa0342130:intron | 50.0% | |
| GCACATGCAGGAGCAACACT+TGG | - | chr2_4:64057426-64057445 | Msa0342130:intron | 55.0% | |
| TTCTTGTGCCCTGTTTGGGC+TGG | - | chr2_4:64057881-64057900 | Msa0342130:intron | 55.0% | |
| GATCACCACCAGCCCAAACA+GGG | + | chr2_4:64057892-64057911 | None:intergenic | 55.0% | |
| AGATCACCACCAGCCCAAAC+AGG | + | chr2_4:64057893-64057912 | None:intergenic | 55.0% | |
| ! | TTGTGCCCTGTTTGGGCTGG+TGG | - | chr2_4:64057884-64057903 | Msa0342130:intron | 60.0% |
| GCAAGGTGGGAACCCTGCCA+TGG | - | chr2_4:64058539-64058558 | Msa0342130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 64056720 | 64059217 | 64056720 | ID=Msa0342130;Name=Msa0342130 |
| chr2_4 | mRNA | 64056720 | 64059217 | 64056720 | ID=Msa0342130-mRNA-1;Parent=Msa0342130;Name=Msa0342130-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|6|0|440 |
| chr2_4 | exon | 64059028 | 64059217 | 64059028 | ID=Msa0342130-mRNA-1:exon:20596;Parent=Msa0342130-mRNA-1 |
| chr2_4 | exon | 64058352 | 64058501 | 64058352 | ID=Msa0342130-mRNA-1:exon:20595;Parent=Msa0342130-mRNA-1 |
| chr2_4 | exon | 64057963 | 64058247 | 64057963 | ID=Msa0342130-mRNA-1:exon:20594;Parent=Msa0342130-mRNA-1 |
| chr2_4 | exon | 64057761 | 64057867 | 64057761 | ID=Msa0342130-mRNA-1:exon:20593;Parent=Msa0342130-mRNA-1 |
| chr2_4 | exon | 64057264 | 64057407 | 64057264 | ID=Msa0342130-mRNA-1:exon:20592;Parent=Msa0342130-mRNA-1 |
| chr2_4 | exon | 64056720 | 64057166 | 64056720 | ID=Msa0342130-mRNA-1:exon:20591;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64059028 | 64059217 | 64059028 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64058352 | 64058501 | 64058352 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64057963 | 64058247 | 64057963 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64057761 | 64057867 | 64057761 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64057264 | 64057407 | 64057264 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| chr2_4 | CDS | 64056720 | 64057166 | 64056720 | ID=Msa0342130-mRNA-1:cds;Parent=Msa0342130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
