Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341030 | P93324.1 | 100.000 | 336 | 0 | 0 | 1 | 336 | 1 | 336 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341030 | sp|P93324|CHOMT_MEDSA | 100.000 | 336 | 0 | 0 | 1 | 336 | 1 | 336 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341030 | A0A072VZR2 | 98.512 | 336 | 5 | 0 | 1 | 336 | 1 | 336 | 0.0 | 688 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1341030 | 0.860133 | 2.554361e-63 | -8.615850e-47 |
| Msa0014590 | Msa1341030 | 0.811141 | 8.122842e-51 | -8.615850e-47 |
| Msa0027860 | Msa1341030 | 0.808682 | 2.746509e-50 | -8.615850e-47 |
| Msa0046390 | Msa1341030 | 0.981126 | 7.747344e-152 | -8.615850e-47 |
| Msa0048950 | Msa1341030 | 0.800019 | 1.753885e-48 | -8.615850e-47 |
| Msa0059880 | Msa1341030 | 0.867128 | 1.719289e-65 | -8.615850e-47 |
| Msa0064990 | Msa1341030 | 0.811198 | 7.893419e-51 | -8.615850e-47 |
| Msa0080010 | Msa1341030 | 0.800185 | 1.622609e-48 | -8.615850e-47 |
| Msa0085110 | Msa1341030 | 0.972909 | 1.533435e-135 | -8.615850e-47 |
| Msa0085710 | Msa1341030 | 0.801278 | 9.711492e-49 | -8.615850e-47 |
| Msa0095910 | Msa1341030 | 0.807015 | 6.213656e-50 | -8.615850e-47 |
| Msa0096860 | Msa1341030 | 0.801789 | 7.627029e-49 | -8.615850e-47 |
| Msa0107830 | Msa1341030 | 0.806492 | 8.014293e-50 | -8.615850e-47 |
| Msa0112620 | Msa1341030 | 0.800209 | 1.604223e-48 | -8.615850e-47 |
| Msa0604200 | Msa1341030 | 0.808291 | 3.329719e-50 | -8.615850e-47 |
| Msa0604280 | Msa1341030 | 0.814528 | 1.471308e-51 | -8.615850e-47 |
| Msa0610190 | Msa1341030 | 0.807888 | 4.056353e-50 | -8.615850e-47 |
| Msa0630130 | Msa1341030 | 0.830137 | 3.478250e-55 | -8.615850e-47 |
| Msa0631700 | Msa1341030 | 0.851660 | 7.678849e-61 | -8.615850e-47 |
| Msa0634290 | Msa1341030 | 0.837037 | 6.584844e-57 | -8.615850e-47 |
| Msa0639400 | Msa1341030 | 0.802157 | 6.410107e-49 | -8.615850e-47 |
| Msa0639410 | Msa1341030 | 0.809448 | 1.882490e-50 | -8.615850e-47 |
| Msa0640290 | Msa1341030 | 0.818184 | 2.237945e-52 | -8.615850e-47 |
| Msa0643840 | Msa1341030 | 0.838466 | 2.828162e-57 | -8.615850e-47 |
| Msa0645060 | Msa1341030 | 0.804388 | 2.212421e-49 | -8.615850e-47 |
| Msa0650310 | Msa1341030 | 0.800669 | 1.293207e-48 | -8.615850e-47 |
| Msa0668220 | Msa1341030 | 0.856639 | 2.808789e-62 | -8.615850e-47 |
| Msa0668230 | Msa1341030 | 0.816522 | 5.295467e-52 | -8.615850e-47 |
| Msa0670360 | Msa1341030 | 0.862807 | 3.901090e-64 | -8.615850e-47 |
| Msa0671490 | Msa1341030 | 0.823459 | 1.369599e-53 | -8.615850e-47 |
| Msa0671640 | Msa1341030 | 0.849327 | 3.472151e-60 | -8.615850e-47 |
| Msa0676190 | Msa1341030 | 0.804262 | 2.350938e-49 | -8.615850e-47 |
| Msa0678620 | Msa1341030 | 0.829945 | 3.874833e-55 | -8.615850e-47 |
| Msa0682420 | Msa1341030 | 0.809968 | 1.455335e-50 | -8.615850e-47 |
| Msa0685080 | Msa1341030 | 0.806397 | 8.391207e-50 | -8.615850e-47 |
| Msa0711240 | Msa1341030 | 0.814503 | 1.490168e-51 | -8.615850e-47 |
| Msa0711250 | Msa1341030 | 0.813128 | 2.994479e-51 | -8.615850e-47 |
| Msa0715250 | Msa1341030 | 0.806689 | 7.282347e-50 | -8.615850e-47 |
| Msa0715260 | Msa1341030 | 0.811516 | 6.731444e-51 | -8.615850e-47 |
| Msa0716630 | Msa1341030 | 0.807680 | 4.491787e-50 | -8.615850e-47 |
| Msa0727480 | Msa1341030 | 0.811270 | 7.613968e-51 | -8.615850e-47 |
| Msa0728210 | Msa1341030 | 0.824919 | 6.216067e-54 | -8.615850e-47 |
| Msa0728520 | Msa1341030 | 0.813375 | 2.643092e-51 | -8.615850e-47 |
| Msa0735140 | Msa1341030 | 0.800954 | 1.130743e-48 | -8.615850e-47 |
| Msa0735340 | Msa1341030 | 0.803110 | 4.076108e-49 | -8.615850e-47 |
| Msa0751960 | Msa1341030 | 0.824703 | 6.991081e-54 | -8.615850e-47 |
| Msa0754530 | Msa1341030 | 0.807084 | 6.008345e-50 | -8.615850e-47 |
| Msa0757220 | Msa1341030 | 0.807911 | 4.011047e-50 | -8.615850e-47 |
| Msa0757240 | Msa1341030 | 0.810075 | 1.380345e-50 | -8.615850e-47 |
| Msa0761420 | Msa1341030 | 0.805725 | 1.162296e-49 | -8.615850e-47 |
| Msa0768670 | Msa1341030 | 0.822339 | 2.497180e-53 | -8.615850e-47 |
| Msa0768720 | Msa1341030 | 0.805671 | 1.192709e-49 | -8.615850e-47 |
| Msa0776540 | Msa1341030 | 0.814703 | 1.346302e-51 | -8.615850e-47 |
| Msa0777060 | Msa1341030 | 0.807377 | 5.208167e-50 | -8.615850e-47 |
| Msa0777070 | Msa1341030 | 0.829559 | 4.809685e-55 | -8.615850e-47 |
| Msa0787860 | Msa1341030 | 0.844619 | 6.758241e-59 | -8.615850e-47 |
| Msa0789410 | Msa1341030 | 0.818856 | 1.575514e-52 | -8.615850e-47 |
| Msa0792330 | Msa1341030 | 0.832895 | 7.281475e-56 | -8.615850e-47 |
| Msa0798230 | Msa1341030 | 0.815881 | 7.365922e-52 | -8.615850e-47 |
| Msa0798240 | Msa1341030 | 0.830447 | 2.922547e-55 | -8.615850e-47 |
| Msa0799110 | Msa1341030 | 0.805423 | 1.344543e-49 | -8.615850e-47 |
| Msa0799120 | Msa1341030 | 0.814241 | 1.702711e-51 | -8.615850e-47 |
| Msa0806930 | Msa1341030 | 0.817332 | 3.484484e-52 | -8.615850e-47 |
| Msa0814160 | Msa1341030 | 0.864153 | 1.492439e-64 | -8.615850e-47 |
| Msa0816140 | Msa1341030 | 0.831567 | 1.551779e-55 | -8.615850e-47 |
| Msa0824850 | Msa1341030 | 0.831439 | 1.668281e-55 | -8.615850e-47 |
| Msa0824860 | Msa1341030 | 0.843178 | 1.643565e-58 | -8.615850e-47 |
| Msa0831890 | Msa1341030 | 0.811796 | 5.852017e-51 | -8.615850e-47 |
| Msa0833230 | Msa1341030 | 0.806385 | 8.442134e-50 | -8.615850e-47 |
| Msa0836740 | Msa1341030 | 0.811315 | 7.445526e-51 | -8.615850e-47 |
| Msa0836750 | Msa1341030 | 0.809969 | 1.454513e-50 | -8.615850e-47 |
| Msa0129290 | Msa1341030 | 0.802409 | 5.688366e-49 | -8.615850e-47 |
| Msa0129850 | Msa1341030 | 0.800608 | 1.330545e-48 | -8.615850e-47 |
| Msa0129890 | Msa1341030 | 0.800550 | 1.367691e-48 | -8.615850e-47 |
| Msa0139460 | Msa1341030 | 0.819618 | 1.056534e-52 | -8.615850e-47 |
| Msa0143710 | Msa1341030 | 0.800619 | 1.323940e-48 | -8.615850e-47 |
| Msa0150910 | Msa1341030 | 0.867822 | 1.030572e-65 | -8.615850e-47 |
| Msa0150920 | Msa1341030 | 0.841106 | 5.808536e-58 | -8.615850e-47 |
| Msa0154750 | Msa1341030 | 0.812538 | 4.031197e-51 | -8.615850e-47 |
| Msa0160580 | Msa1341030 | 0.812344 | 4.445824e-51 | -8.615850e-47 |
| Msa0163340 | Msa1341030 | 0.807319 | 5.357276e-50 | -8.615850e-47 |
| Msa0175060 | Msa1341030 | 0.808995 | 2.354220e-50 | -8.615850e-47 |
| Msa0177540 | Msa1341030 | 0.811552 | 6.612874e-51 | -8.615850e-47 |
| Msa0177550 | Msa1341030 | 0.918841 | 9.463999e-87 | -8.615850e-47 |
| Msa0182840 | Msa1341030 | 0.805114 | 1.560807e-49 | -8.615850e-47 |
| Msa0190670 | Msa1341030 | 0.825101 | 5.632887e-54 | -8.615850e-47 |
| Msa0194230 | Msa1341030 | 0.848156 | 7.334397e-60 | -8.615850e-47 |
| Msa0195190 | Msa1341030 | 0.832493 | 9.161073e-56 | -8.615850e-47 |
| Msa0197020 | Msa1341030 | 0.827053 | 1.934571e-54 | -8.615850e-47 |
| Msa0207640 | Msa1341030 | 0.835836 | 1.330703e-56 | -8.615850e-47 |
| Msa0212550 | Msa1341030 | 0.856719 | 2.660007e-62 | -8.615850e-47 |
| Msa0225910 | Msa1341030 | 0.812844 | 3.455009e-51 | -8.615850e-47 |
| Msa0234120 | Msa1341030 | 0.836624 | 8.391845e-57 | -8.615850e-47 |
| Msa1225850 | Msa1341030 | 0.806273 | 8.909795e-50 | -8.615850e-47 |
| Msa1245800 | Msa1341030 | 0.800923 | 1.147339e-48 | -8.615850e-47 |
| Msa1256730 | Msa1341030 | 0.819436 | 1.162358e-52 | -8.615850e-47 |
| Msa1296490 | Msa1341030 | 0.829639 | 4.599698e-55 | -8.615850e-47 |
| Msa1298090 | Msa1341030 | 0.822506 | 2.284153e-53 | -8.615850e-47 |
| Msa1316960 | Msa1341030 | 0.809960 | 1.461361e-50 | -8.615850e-47 |
| Msa1319030 | Msa1341030 | 0.804174 | 2.452015e-49 | -8.615850e-47 |
| Msa1319190 | Msa1341030 | 0.802050 | 6.743165e-49 | -8.615850e-47 |
| Msa1323030 | Msa1341030 | 0.836031 | 1.187693e-56 | -8.615850e-47 |
| Msa1323120 | Msa1341030 | 0.800089 | 1.697339e-48 | -8.615850e-47 |
| Msa1323150 | Msa1341030 | 0.828253 | 9.960363e-55 | -8.615850e-47 |
| Msa1341030 | Msa1343590 | 0.815802 | 7.671947e-52 | -8.615850e-47 |
| Msa1341030 | Msa1355330 | 0.804720 | 1.886765e-49 | -8.615850e-47 |
| Msa1341030 | Msa1355340 | 0.855946 | 4.483563e-62 | -8.615850e-47 |
| Msa1341030 | Msa1357750 | 0.816404 | 5.627828e-52 | -8.615850e-47 |
| Msa1341030 | Msa1357840 | 0.829745 | 4.334436e-55 | -8.615850e-47 |
| Msa1341030 | Msa1357860 | 0.801228 | 9.942210e-49 | -8.615850e-47 |
| Msa1341030 | Msa1373560 | 0.806149 | 9.464617e-50 | -8.615850e-47 |
| Msa1341030 | Msa1386120 | 0.805830 | 1.104339e-49 | -8.615850e-47 |
| Msa1341030 | Msa1395150 | 0.814943 | 1.191132e-51 | -8.615850e-47 |
| Msa1341030 | Msa1411550 | 0.859882 | 3.040119e-63 | -8.615850e-47 |
| Msa1341030 | Msa1412360 | 0.811366 | 7.258068e-51 | -8.615850e-47 |
| Msa1341030 | Msa1419390 | 0.823685 | 1.212484e-53 | -8.615850e-47 |
| Msa1341030 | Msa1427670 | 0.806263 | 8.956760e-50 | -8.615850e-47 |
| Msa1341030 | Msa1438860 | 0.809261 | 2.064595e-50 | -8.615850e-47 |
| Msa1341030 | Msa1445900 | 0.806088 | 9.748013e-50 | -8.615850e-47 |
| Msa1341030 | Msa1448150 | 0.813590 | 2.369546e-51 | -8.615850e-47 |
| Msa1341030 | Msa1453650 | 0.809211 | 2.116538e-50 | -8.615850e-47 |
| Msa1341030 | Msa1459610 | 0.830132 | 3.487802e-55 | -8.615850e-47 |
| Msa0366510 | Msa1341030 | 0.833489 | 5.179191e-56 | -8.615850e-47 |
| Msa0374040 | Msa1341030 | 0.834300 | 3.245315e-56 | -8.615850e-47 |
| Msa0378390 | Msa1341030 | 0.813488 | 2.495146e-51 | -8.615850e-47 |
| Msa0390200 | Msa1341030 | 0.803213 | 3.880389e-49 | -8.615850e-47 |
| Msa0396700 | Msa1341030 | 0.819682 | 1.021458e-52 | -8.615850e-47 |
| Msa0396790 | Msa1341030 | 0.804473 | 2.124350e-49 | -8.615850e-47 |
| Msa0409490 | Msa1341030 | 0.809208 | 2.119311e-50 | -8.615850e-47 |
| Msa0414480 | Msa1341030 | 0.856767 | 2.574988e-62 | -8.615850e-47 |
| Msa0418150 | Msa1341030 | 0.829349 | 5.410509e-55 | -8.615850e-47 |
| Msa0418160 | Msa1341030 | 0.829279 | 5.625941e-55 | -8.615850e-47 |
| Msa0423200 | Msa1341030 | 0.808066 | 3.717346e-50 | -8.615850e-47 |
| Msa0423220 | Msa1341030 | 0.802337 | 5.886494e-49 | -8.615850e-47 |
| Msa0427740 | Msa1341030 | 0.805622 | 1.221085e-49 | -8.615850e-47 |
| Msa0427970 | Msa1341030 | 0.803747 | 3.007295e-49 | -8.615850e-47 |
| Msa0444250 | Msa1341030 | 0.803550 | 3.303942e-49 | -8.615850e-47 |
| Msa0444400 | Msa1341030 | 0.813835 | 2.093292e-51 | -8.615850e-47 |
| Msa0464300 | Msa1341030 | 0.818493 | 1.904772e-52 | -8.615850e-47 |
| Msa0464310 | Msa1341030 | 0.855861 | 4.747742e-62 | -8.615850e-47 |
| Msa0469450 | Msa1341030 | 0.829037 | 6.441030e-55 | -8.615850e-47 |
| Msa0469460 | Msa1341030 | 0.802075 | 6.664453e-49 | -8.615850e-47 |
| Msa0985700 | Msa1341030 | 0.828790 | 7.390902e-55 | -8.615850e-47 |
| Msa0987640 | Msa1341030 | 0.812198 | 4.783403e-51 | -8.615850e-47 |
| Msa0993450 | Msa1341030 | 0.804418 | 2.180870e-49 | -8.615850e-47 |
| Msa0996980 | Msa1341030 | 0.827649 | 1.392031e-54 | -8.615850e-47 |
| Msa1006030 | Msa1341030 | 0.844262 | 8.429579e-59 | -8.615850e-47 |
| Msa1006170 | Msa1341030 | 0.835897 | 1.284305e-56 | -8.615850e-47 |
| Msa1007940 | Msa1341030 | 0.801817 | 7.529358e-49 | -8.615850e-47 |
| Msa1021620 | Msa1341030 | 0.815519 | 8.867153e-52 | -8.615850e-47 |
| Msa1022490 | Msa1341030 | 0.841699 | 4.055600e-58 | -8.615850e-47 |
| Msa1022510 | Msa1341030 | 0.844366 | 7.902612e-59 | -8.615850e-47 |
| Msa1024350 | Msa1341030 | 0.846072 | 2.732843e-59 | -8.615850e-47 |
| Msa1026050 | Msa1341030 | 0.807957 | 3.921997e-50 | -8.615850e-47 |
| Msa1026170 | Msa1341030 | 0.807576 | 4.724243e-50 | -8.615850e-47 |
| Msa1041630 | Msa1341030 | 0.812789 | 3.552346e-51 | -8.615850e-47 |
| Msa1048350 | Msa1341030 | 0.823824 | 1.125189e-53 | -8.615850e-47 |
| Msa1048390 | Msa1341030 | 0.811504 | 6.773594e-51 | -8.615850e-47 |
| Msa1049400 | Msa1341030 | 0.800911 | 1.154332e-48 | -8.615850e-47 |
| Msa1061670 | Msa1341030 | 0.868995 | 4.311416e-66 | -8.615850e-47 |
| Msa1061840 | Msa1341030 | 0.815718 | 8.007540e-52 | -8.615850e-47 |
| Msa1064940 | Msa1341030 | 0.852165 | 5.520745e-61 | -8.615850e-47 |
| Msa1076830 | Msa1341030 | 0.802701 | 4.951025e-49 | -8.615850e-47 |
| Msa1081610 | Msa1341030 | 0.822449 | 2.355350e-53 | -8.615850e-47 |
| Msa1087370 | Msa1341030 | 0.851138 | 1.078443e-60 | -8.615850e-47 |
| Msa1087380 | Msa1341030 | 0.850439 | 1.696556e-60 | -8.615850e-47 |
| Msa1098100 | Msa1341030 | 0.813498 | 2.483255e-51 | -8.615850e-47 |
| Msa1100330 | Msa1341030 | 0.824455 | 7.998348e-54 | -8.615850e-47 |
| Msa1104960 | Msa1341030 | 0.805560 | 1.258656e-49 | -8.615850e-47 |
| Msa1106680 | Msa1341030 | 0.835198 | 1.928982e-56 | -8.615850e-47 |
| Msa1106960 | Msa1341030 | 0.862663 | 4.319733e-64 | -8.615850e-47 |
| Msa0240580 | Msa1341030 | 0.800554 | 1.364934e-48 | -8.615850e-47 |
| Msa0242830 | Msa1341030 | 0.800869 | 1.177067e-48 | -8.615850e-47 |
| Msa0252930 | Msa1341030 | 0.835351 | 1.765511e-56 | -8.615850e-47 |
| Msa0259110 | Msa1341030 | 0.835782 | 1.373602e-56 | -8.615850e-47 |
| Msa0259300 | Msa1341030 | 0.835971 | 1.229569e-56 | -8.615850e-47 |
| Msa0261400 | Msa1341030 | 0.801528 | 8.630928e-49 | -8.615850e-47 |
| Msa0266650 | Msa1341030 | 0.808126 | 3.608904e-50 | -8.615850e-47 |
| Msa0271700 | Msa1341030 | 0.800990 | 1.111905e-48 | -8.615850e-47 |
| Msa0272210 | Msa1341030 | 0.804069 | 2.578725e-49 | -8.615850e-47 |
| Msa0274250 | Msa1341030 | 0.862093 | 6.468302e-64 | -8.615850e-47 |
| Msa0274260 | Msa1341030 | 0.846646 | 1.906290e-59 | -8.615850e-47 |
| Msa0276580 | Msa1341030 | 0.817366 | 3.423581e-52 | -8.615850e-47 |
| Msa0276780 | Msa1341030 | 0.817303 | 3.537217e-52 | -8.615850e-47 |
| Msa0278460 | Msa1341030 | 0.808708 | 2.712410e-50 | -8.615850e-47 |
| Msa0278950 | Msa1341030 | 0.851961 | 6.309212e-61 | -8.615850e-47 |
| Msa0278960 | Msa1341030 | 0.806439 | 8.222706e-50 | -8.615850e-47 |
| Msa0281190 | Msa1341030 | 0.805175 | 1.515653e-49 | -8.615850e-47 |
| Msa0287630 | Msa1341030 | 0.808474 | 3.042844e-50 | -8.615850e-47 |
| Msa0287720 | Msa1341030 | 0.827021 | 1.968934e-54 | -8.615850e-47 |
| Msa0308740 | Msa1341030 | 0.824082 | 9.785481e-54 | -8.615850e-47 |
| Msa0314440 | Msa1341030 | 0.837567 | 4.816963e-57 | -8.615850e-47 |
| Msa0316600 | Msa1341030 | 0.820984 | 5.138494e-53 | -8.615850e-47 |
| Msa0318370 | Msa1341030 | 0.827460 | 1.545237e-54 | -8.615850e-47 |
| Msa0319830 | Msa1341030 | 0.807046 | 6.118585e-50 | -8.615850e-47 |
| Msa0328090 | Msa1341030 | 0.812268 | 4.617443e-51 | -8.615850e-47 |
| Msa0342130 | Msa1341030 | 0.827537 | 1.480910e-54 | -8.615850e-47 |
| Msa0342160 | Msa1341030 | 0.811530 | 6.687070e-51 | -8.615850e-47 |
| Msa0346170 | Msa1341030 | 0.851365 | 9.306037e-61 | -8.615850e-47 |
| Msa0348370 | Msa1341030 | 0.802314 | 5.949836e-49 | -8.615850e-47 |
| Msa0349910 | Msa1341030 | 0.813190 | 2.902135e-51 | -8.615850e-47 |
| Msa1109880 | Msa1341030 | 0.814383 | 1.584365e-51 | -8.615850e-47 |
| Msa1109890 | Msa1341030 | 0.830618 | 2.654071e-55 | -8.615850e-47 |
| Msa1110040 | Msa1341030 | 0.824376 | 8.348932e-54 | -8.615850e-47 |
| Msa1115900 | Msa1341030 | 0.810092 | 1.368636e-50 | -8.615850e-47 |
| Msa1138110 | Msa1341030 | 0.829783 | 4.242938e-55 | -8.615850e-47 |
| Msa1147030 | Msa1341030 | 0.831218 | 1.891137e-55 | -8.615850e-47 |
| Msa1148210 | Msa1341030 | 0.819457 | 1.149716e-52 | -8.615850e-47 |
| Msa1153690 | Msa1341030 | 0.851872 | 6.686352e-61 | -8.615850e-47 |
| Msa1156240 | Msa1341030 | 0.801133 | 1.039810e-48 | -8.615850e-47 |
| Msa1166530 | Msa1341030 | 0.811464 | 6.910769e-51 | -8.615850e-47 |
| Msa1167960 | Msa1341030 | 0.802234 | 6.179079e-49 | -8.615850e-47 |
| Msa1170340 | Msa1341030 | 0.819060 | 1.415874e-52 | -8.615850e-47 |
| Msa1173290 | Msa1341030 | 0.855167 | 7.566909e-62 | -8.615850e-47 |
| Msa1177090 | Msa1341030 | 0.841704 | 4.042580e-58 | -8.615850e-47 |
| Msa1206380 | Msa1341030 | 0.804136 | 2.497297e-49 | -8.615850e-47 |
| Msa1208050 | Msa1341030 | 0.807965 | 3.906774e-50 | -8.615850e-47 |
| Msa1208140 | Msa1341030 | 0.814779 | 1.294865e-51 | -8.615850e-47 |
| Msa1208910 | Msa1341030 | 0.808481 | 3.032081e-50 | -8.615850e-47 |
| Msa0490060 | Msa1341030 | 0.801539 | 8.586236e-49 | -8.615850e-47 |
| Msa0491800 | Msa1341030 | 0.820588 | 6.335815e-53 | -8.615850e-47 |
| Msa0491950 | Msa1341030 | 0.818725 | 1.687318e-52 | -8.615850e-47 |
| Msa0515130 | Msa1341030 | 0.841393 | 4.884560e-58 | -8.615850e-47 |
| Msa0515150 | Msa1341030 | 0.844944 | 5.523943e-59 | -8.615850e-47 |
| Msa0518570 | Msa1341030 | 0.805538 | 1.271967e-49 | -8.615850e-47 |
| Msa0533520 | Msa1341030 | 0.807693 | 4.462234e-50 | -8.615850e-47 |
| Msa0535570 | Msa1341030 | 0.857681 | 1.383455e-62 | -8.615850e-47 |
| Msa0538440 | Msa1341030 | 0.837036 | 6.586615e-57 | -8.615850e-47 |
| Msa0538450 | Msa1341030 | 0.849325 | 3.475921e-60 | -8.615850e-47 |
| Msa0538520 | Msa1341030 | 0.854985 | 8.544154e-62 | -8.615850e-47 |
| Msa0538530 | Msa1341030 | 0.831267 | 1.839138e-55 | -8.615850e-47 |
| Msa0543740 | Msa1341030 | 0.809295 | 2.030712e-50 | -8.615850e-47 |
| Msa0546760 | Msa1341030 | 0.811228 | 7.776995e-51 | -8.615850e-47 |
| Msa0549170 | Msa1341030 | 0.817060 | 4.011149e-52 | -8.615850e-47 |
| Msa0554660 | Msa1341030 | 0.824085 | 9.768429e-54 | -8.615850e-47 |
| Msa0555920 | Msa1341030 | 0.802384 | 5.756267e-49 | -8.615850e-47 |
| Msa0579530 | Msa1341030 | 0.804685 | 1.918352e-49 | -8.615850e-47 |
| Msa0584360 | Msa1341030 | 0.804659 | 1.943089e-49 | -8.615850e-47 |
| Msa0589740 | Msa1341030 | 0.806616 | 7.543285e-50 | -8.615850e-47 |
| Msa0591490 | Msa1341030 | 0.860216 | 2.411246e-63 | -8.615850e-47 |
| Msa0594320 | Msa1341030 | 0.834090 | 3.664174e-56 | -8.615850e-47 |
| Msa0594330 | Msa1341030 | 0.853087 | 3.013477e-61 | -8.615850e-47 |
| Msa0597820 | Msa1341030 | 0.822198 | 2.692990e-53 | -8.615850e-47 |
| Msa0854840 | Msa1341030 | 0.870216 | 1.725866e-66 | -8.615850e-47 |
| Msa0861730 | Msa1341030 | 0.827825 | 1.263006e-54 | -8.615850e-47 |
| Msa0863840 | Msa1341030 | 0.840181 | 1.014936e-57 | -8.615850e-47 |
| Msa0863850 | Msa1341030 | 0.833433 | 5.348050e-56 | -8.615850e-47 |
| Msa0863860 | Msa1341030 | 0.832448 | 9.398083e-56 | -8.615850e-47 |
| Msa0864160 | Msa1341030 | 0.840895 | 6.599019e-58 | -8.615850e-47 |
| Msa0867080 | Msa1341030 | 0.802375 | 5.781413e-49 | -8.615850e-47 |
| Msa0868870 | Msa1341030 | 0.815657 | 8.261375e-52 | -8.615850e-47 |
| Msa0874750 | Msa1341030 | 0.819094 | 1.391358e-52 | -8.615850e-47 |
| Msa0883640 | Msa1341030 | 0.826956 | 2.041095e-54 | -8.615850e-47 |
| Msa0893840 | Msa1341030 | 0.803991 | 2.676096e-49 | -8.615850e-47 |
| Msa0896910 | Msa1341030 | 0.809728 | 1.639472e-50 | -8.615850e-47 |
| Msa0896920 | Msa1341030 | 0.850289 | 1.869719e-60 | -8.615850e-47 |
| Msa0896950 | Msa1341030 | 0.803889 | 2.810251e-49 | -8.615850e-47 |
| Msa0902340 | Msa1341030 | 0.812034 | 5.193711e-51 | -8.615850e-47 |
| Msa0910830 | Msa1341030 | 0.839648 | 1.397062e-57 | -8.615850e-47 |
| Msa0932900 | Msa1341030 | 0.807462 | 4.995395e-50 | -8.615850e-47 |
| Msa0932930 | Msa1341030 | 0.822847 | 1.903142e-53 | -8.615850e-47 |
| Msa0933610 | Msa1341030 | 0.813976 | 1.948406e-51 | -8.615850e-47 |
| Msa0941120 | Msa1341030 | 0.824759 | 6.781836e-54 | -8.615850e-47 |
| Msa0960090 | Msa1341030 | 0.827423 | 1.577809e-54 | -8.615850e-47 |
| Msa0967820 | Msa1341030 | 0.819895 | 9.133397e-53 | -8.615850e-47 |
| Msa0976400 | Msa1341030 | 0.811822 | 5.777568e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341030 | MtrunA17_Chr1g0200491 | 98.512 | 336 | 5 | 0 | 1 | 336 | 1 | 336 | 0.0 | 688 |
| Msa1341030 | MtrunA17_Chr7g0218131 | 65.282 | 337 | 113 | 3 | 1 | 336 | 1 | 334 | 5.19e-162 | 457 |
| Msa1341030 | MtrunA17_Chr7g0218261 | 63.526 | 329 | 117 | 2 | 8 | 336 | 7 | 332 | 4.73e-153 | 434 |
| Msa1341030 | MtrunA17_Chr7g0218211 | 61.702 | 329 | 122 | 3 | 8 | 335 | 7 | 332 | 3.39e-149 | 424 |
| Msa1341030 | MtrunA17_Chr7g0218181 | 61.934 | 331 | 117 | 3 | 8 | 336 | 8 | 331 | 5.12e-149 | 424 |
| Msa1341030 | MtrunA17_Chr2g0307521 | 60.883 | 317 | 119 | 3 | 21 | 336 | 15 | 327 | 4.50e-142 | 406 |
| Msa1341030 | MtrunA17_Chr7g0218301 | 58.235 | 340 | 137 | 3 | 1 | 336 | 1 | 339 | 5.12e-142 | 406 |
| Msa1341030 | MtrunA17_Chr7g0218271 | 56.471 | 340 | 143 | 3 | 1 | 336 | 1 | 339 | 4.09e-138 | 396 |
| Msa1341030 | MtrunA17_Chr3g0085201 | 56.656 | 323 | 136 | 3 | 13 | 334 | 1 | 320 | 1.56e-125 | 363 |
| Msa1341030 | MtrunA17_Chr3g0085211 | 55.556 | 315 | 136 | 3 | 21 | 334 | 22 | 333 | 6.32e-122 | 355 |
| Msa1341030 | MtrunA17_Chr1g0163601 | 51.952 | 333 | 153 | 5 | 7 | 336 | 5 | 333 | 3.21e-118 | 345 |
| Msa1341030 | MtrunA17_Chr1g0163611 | 50.755 | 331 | 157 | 4 | 9 | 336 | 6 | 333 | 4.39e-117 | 343 |
| Msa1341030 | MtrunA17_Chr1g0163621 | 51.190 | 336 | 150 | 5 | 12 | 336 | 15 | 347 | 1.92e-113 | 334 |
| Msa1341030 | MtrunA17_Chr3g0128011 | 48.910 | 321 | 159 | 4 | 10 | 330 | 60 | 375 | 8.01e-104 | 311 |
| Msa1341030 | MtrunA17_Chr5g0448091 | 42.767 | 318 | 178 | 4 | 20 | 336 | 14 | 328 | 1.12e-85 | 262 |
| Msa1341030 | MtrunA17_Chr7g0276401 | 42.547 | 322 | 180 | 4 | 8 | 329 | 16 | 332 | 7.99e-80 | 248 |
| Msa1341030 | MtrunA17_Chr8g0367441 | 40.854 | 328 | 182 | 7 | 15 | 336 | 21 | 342 | 9.68e-78 | 243 |
| Msa1341030 | MtrunA17_Chr8g0367451 | 39.877 | 326 | 188 | 6 | 15 | 336 | 20 | 341 | 7.79e-75 | 235 |
| Msa1341030 | MtrunA17_Chr7g0276411 | 38.973 | 331 | 188 | 7 | 13 | 336 | 4 | 327 | 1.94e-74 | 233 |
| Msa1341030 | MtrunA17_Chr8g0367491 | 39.490 | 314 | 183 | 5 | 26 | 336 | 32 | 341 | 3.35e-72 | 228 |
| Msa1341030 | MtrunA17_Chr8g0367381 | 39.185 | 319 | 168 | 6 | 15 | 330 | 21 | 316 | 1.98e-70 | 222 |
| Msa1341030 | MtrunA17_Chr8g0367501 | 39.634 | 328 | 191 | 5 | 11 | 335 | 3 | 326 | 6.31e-70 | 224 |
| Msa1341030 | MtrunA17_Chr8g0345851 | 45.205 | 219 | 119 | 1 | 111 | 329 | 30 | 247 | 6.35e-60 | 194 |
| Msa1341030 | MtrunA17_Chr2g0314271 | 34.951 | 309 | 192 | 3 | 13 | 320 | 1 | 301 | 1.21e-57 | 190 |
| Msa1341030 | MtrunA17_Chr3g0130011 | 37.346 | 324 | 183 | 8 | 9 | 326 | 2 | 311 | 1.44e-56 | 187 |
| Msa1341030 | MtrunA17_Chr3g0130061 | 35.714 | 322 | 191 | 7 | 9 | 326 | 2 | 311 | 1.95e-53 | 179 |
| Msa1341030 | MtrunA17_Chr4g0021981 | 36.786 | 280 | 159 | 8 | 41 | 314 | 44 | 311 | 6.17e-45 | 157 |
| Msa1341030 | MtrunA17_Chr4g0022021 | 36.268 | 284 | 160 | 10 | 41 | 315 | 44 | 315 | 6.50e-45 | 157 |
| Msa1341030 | MtrunA17_Chr3g0121301 | 30.743 | 296 | 190 | 6 | 39 | 332 | 38 | 320 | 1.84e-42 | 150 |
| Msa1341030 | MtrunA17_Chr4g0014561 | 29.940 | 334 | 216 | 8 | 13 | 335 | 1 | 327 | 1.30e-39 | 143 |
| Msa1341030 | MtrunA17_Chr4g0014681 | 29.940 | 334 | 216 | 8 | 13 | 335 | 1 | 327 | 1.89e-39 | 142 |
| Msa1341030 | MtrunA17_Chr5g0432301 | 30.000 | 310 | 199 | 7 | 34 | 336 | 27 | 325 | 6.90e-39 | 141 |
| Msa1341030 | MtrunA17_Chr5g0432251 | 27.097 | 310 | 208 | 7 | 34 | 336 | 26 | 324 | 1.01e-38 | 140 |
| Msa1341030 | MtrunA17_Chr6g0482291 | 48.120 | 133 | 61 | 1 | 197 | 329 | 9 | 133 | 1.81e-38 | 134 |
| Msa1341030 | MtrunA17_Chr7g0219141 | 29.766 | 299 | 198 | 5 | 41 | 336 | 33 | 322 | 1.69e-37 | 137 |
| Msa1341030 | MtrunA17_Chr7g0219161 | 30.739 | 257 | 172 | 4 | 83 | 336 | 69 | 322 | 2.58e-37 | 137 |
| Msa1341030 | MtrunA17_Chr4g0014641 | 29.003 | 331 | 217 | 8 | 16 | 335 | 4 | 327 | 3.24e-37 | 137 |
| Msa1341030 | MtrunA17_Chr8g0367401 | 52.727 | 110 | 52 | 0 | 166 | 275 | 2 | 111 | 4.95e-37 | 130 |
| Msa1341030 | MtrunA17_Chr1g0188371 | 28.664 | 307 | 200 | 8 | 38 | 336 | 30 | 325 | 1.46e-36 | 135 |
| Msa1341030 | MtrunA17_Chr5g0432241 | 29.032 | 310 | 202 | 8 | 34 | 336 | 27 | 325 | 1.78e-36 | 134 |
| Msa1341030 | MtrunA17_Chr1g0188391 | 29.042 | 334 | 218 | 9 | 10 | 336 | 5 | 326 | 5.28e-36 | 133 |
| Msa1341030 | MtrunA17_Chr4g0046531 | 29.373 | 303 | 199 | 5 | 38 | 336 | 30 | 321 | 1.54e-34 | 133 |
| Msa1341030 | MtrunA17_Chr4g0046531 | 28.713 | 303 | 201 | 5 | 38 | 336 | 392 | 683 | 2.32e-32 | 127 |
| Msa1341030 | MtrunA17_Chr5g0432211 | 29.032 | 310 | 188 | 9 | 34 | 336 | 26 | 310 | 1.75e-34 | 129 |
| Msa1341030 | MtrunA17_Chr7g0223231 | 29.260 | 311 | 192 | 8 | 34 | 336 | 25 | 315 | 3.23e-34 | 128 |
| Msa1341030 | MtrunA17_Chr7g0223241 | 29.126 | 309 | 191 | 8 | 34 | 334 | 25 | 313 | 7.20e-33 | 125 |
| Msa1341030 | MtrunA17_Chr4g0040621 | 28.228 | 333 | 208 | 12 | 19 | 336 | 18 | 334 | 8.50e-32 | 122 |
| Msa1341030 | MtrunA17_Chr4g0046361 | 30.968 | 310 | 198 | 8 | 34 | 336 | 26 | 326 | 1.05e-31 | 122 |
| Msa1341030 | MtrunA17_Chr4g0014661 | 30.903 | 288 | 180 | 7 | 17 | 297 | 5 | 280 | 4.79e-31 | 120 |
| Msa1341030 | MtrunA17_Chr1g0170941 | 67.105 | 76 | 25 | 0 | 197 | 272 | 1 | 76 | 1.83e-29 | 108 |
| Msa1341030 | MtrunA17_Chr4g0014591 | 30.420 | 286 | 180 | 7 | 17 | 295 | 5 | 278 | 5.41e-29 | 114 |
| Msa1341030 | MtrunA17_Chr1g0170931 | 49.138 | 116 | 55 | 2 | 26 | 139 | 6 | 119 | 7.36e-28 | 105 |
| Msa1341030 | MtrunA17_Chr5g0432261 | 26.837 | 313 | 177 | 9 | 34 | 336 | 22 | 292 | 1.68e-27 | 110 |
| Msa1341030 | MtrunA17_Chr4g0046341 | 30.892 | 314 | 196 | 8 | 34 | 336 | 26 | 329 | 5.11e-26 | 106 |
| Msa1341030 | MtrunA17_Chr8g0367421 | 41.818 | 110 | 47 | 1 | 166 | 275 | 2 | 94 | 4.19e-24 | 95.5 |
| Msa1341030 | MtrunA17_Chr4g0014601 | 30.224 | 268 | 167 | 8 | 17 | 277 | 5 | 259 | 1.23e-23 | 98.2 |
| Msa1341030 | MtrunA17_Chr6g0476581 | 55.682 | 88 | 32 | 3 | 8 | 93 | 8 | 90 | 1.60e-19 | 82.8 |
| Msa1341030 | MtrunA17_Chr8g0367461 | 42.667 | 75 | 43 | 0 | 261 | 335 | 1 | 75 | 3.51e-16 | 73.6 |
| Msa1341030 | MtrunA17_Chr7g0219171 | 36.364 | 88 | 53 | 1 | 242 | 326 | 117 | 204 | 6.66e-16 | 76.3 |
| Msa1341030 | MtrunA17_Chr8g0367471 | 51.471 | 68 | 33 | 0 | 189 | 256 | 1 | 68 | 9.10e-16 | 72.0 |
| Msa1341030 | MtrunA17_Chr1g0170951 | 48.148 | 54 | 28 | 0 | 283 | 336 | 17 | 70 | 9.36e-12 | 60.8 |
| Msa1341030 | MtrunA17_Chr8g0367481 | 34.821 | 112 | 67 | 4 | 18 | 126 | 24 | 132 | 9.75e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341030 | AT5G54160.1 | 48.553 | 311 | 154 | 3 | 20 | 330 | 15 | 319 | 3.63e-101 | 302 |
| Msa1341030 | AT1G51990.2 | 40.244 | 328 | 188 | 5 | 12 | 336 | 5 | 327 | 2.16e-83 | 257 |
| Msa1341030 | AT1G51990.1 | 40.244 | 328 | 188 | 5 | 12 | 336 | 5 | 327 | 1.22e-82 | 255 |
| Msa1341030 | AT1G77520.1 | 39.941 | 338 | 185 | 7 | 6 | 335 | 17 | 344 | 9.43e-78 | 243 |
| Msa1341030 | AT1G33030.1 | 40.972 | 288 | 162 | 5 | 28 | 313 | 10 | 291 | 2.95e-70 | 223 |
| Msa1341030 | AT1G63140.2 | 39.385 | 325 | 184 | 7 | 21 | 336 | 26 | 346 | 8.60e-69 | 220 |
| Msa1341030 | AT1G21130.1 | 41.270 | 315 | 175 | 7 | 26 | 335 | 27 | 336 | 1.30e-68 | 219 |
| Msa1341030 | AT1G63140.4 | 39.385 | 325 | 184 | 7 | 21 | 336 | 46 | 366 | 1.77e-68 | 219 |
| Msa1341030 | AT1G77530.1 | 40.179 | 336 | 187 | 6 | 6 | 335 | 17 | 344 | 3.85e-67 | 216 |
| Msa1341030 | AT1G21120.1 | 40.635 | 315 | 177 | 7 | 26 | 335 | 27 | 336 | 7.23e-67 | 214 |
| Msa1341030 | AT1G21100.1 | 40.952 | 315 | 176 | 7 | 26 | 335 | 27 | 336 | 1.50e-66 | 214 |
| Msa1341030 | AT1G21120.2 | 40.635 | 315 | 177 | 7 | 26 | 335 | 75 | 384 | 2.08e-66 | 215 |
| Msa1341030 | AT1G21110.1 | 40.000 | 315 | 179 | 7 | 26 | 335 | 27 | 336 | 1.10e-65 | 212 |
| Msa1341030 | AT5G53810.1 | 39.474 | 304 | 177 | 4 | 38 | 335 | 39 | 341 | 5.22e-64 | 207 |
| Msa1341030 | AT1G76790.1 | 38.245 | 319 | 181 | 6 | 26 | 335 | 17 | 328 | 1.05e-59 | 196 |
| Msa1341030 | AT3G53140.1 | 36.570 | 309 | 184 | 5 | 17 | 320 | 5 | 306 | 2.61e-58 | 192 |
| Msa1341030 | AT1G33030.3 | 40.079 | 252 | 143 | 5 | 28 | 277 | 10 | 255 | 4.35e-54 | 179 |
| Msa1341030 | AT1G33030.2 | 40.161 | 249 | 141 | 5 | 28 | 274 | 10 | 252 | 4.76e-53 | 176 |
| Msa1341030 | AT5G37170.1 | 38.163 | 283 | 134 | 7 | 56 | 330 | 43 | 292 | 4.98e-53 | 177 |
| Msa1341030 | AT1G63140.1 | 38.697 | 261 | 149 | 5 | 21 | 274 | 46 | 302 | 7.03e-50 | 169 |
| Msa1341030 | AT1G21130.2 | 43.083 | 253 | 135 | 6 | 26 | 274 | 27 | 274 | 1.06e-49 | 168 |
| Msa1341030 | AT1G62900.1 | 46.108 | 167 | 88 | 2 | 172 | 336 | 4 | 170 | 1.86e-45 | 154 |
| Msa1341030 | AT5G37170.2 | 47.097 | 155 | 80 | 2 | 178 | 330 | 38 | 192 | 1.05e-43 | 150 |
| Msa1341030 | AT5G37170.3 | 47.917 | 144 | 73 | 2 | 189 | 330 | 1 | 144 | 7.73e-41 | 141 |
| Msa1341030 | AT1G63140.3 | 37.288 | 236 | 137 | 5 | 21 | 249 | 46 | 277 | 1.93e-38 | 138 |
| Msa1341030 | AT1G77530.2 | 37.549 | 253 | 145 | 5 | 6 | 253 | 17 | 261 | 4.80e-38 | 137 |
| Msa1341030 | AT4G35150.1 | 41.875 | 160 | 83 | 3 | 162 | 315 | 105 | 260 | 1.12e-37 | 137 |
| Msa1341030 | AT4G35160.1 | 31.761 | 318 | 190 | 9 | 9 | 315 | 16 | 317 | 1.83e-37 | 138 |
Find 67 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTTATTAATGGATATT+TGG | 0.122440 | tig0004681:-31417 | Msa1341030:intergenic |
| AAGTTAATTCCCTTTATTAA+TGG | 0.172707 | tig0004681:-31425 | Msa1341030:intergenic |
| TCACTTGTGTTTGGTTCTTC+TGG | 0.194077 | tig0004681:-31940 | Msa1341030:intergenic |
| TGATGAAAGTAGAGGTTATT+TGG | 0.221768 | tig0004681:+30852 | Msa1341030:CDS |
| GAAAATGCACCACCACTTTC+AGG | 0.245970 | tig0004681:+31467 | Msa1341030:CDS |
| ATCCAAATATCCATTAATAA+AGG | 0.266045 | tig0004681:+31415 | Msa1341030:CDS |
| ATCCTGCATTATTACAAGTT+TGG | 0.305992 | tig0004681:+30899 | Msa1341030:CDS |
| TTAGATTCTTCACTTGTGTT+TGG | 0.326373 | tig0004681:-31949 | Msa1341030:intergenic |
| GACTTGTTCAAGAACGTTCA+TGG | 0.340035 | tig0004681:+31212 | Msa1341030:CDS |
| TGTAGGCTGTATGCCATAAT+TGG | 0.348746 | tig0004681:+31812 | Msa1341030:intron |
| GTTCTGAGGTAGCACTAATT+TGG | 0.352301 | tig0004681:-30510 | Msa1341030:intergenic |
| GGTGGTGCCGAGAGAGTTTA+CGG | 0.386591 | tig0004681:+30799 | Msa1341030:CDS |
| AGCACTCGGACTTGCCTAAT+AGG | 0.390804 | tig0004681:+30707 | Msa1341030:CDS |
| AGTGACAAAGTATGAATTCA+TGG | 0.400109 | tig0004681:+31235 | Msa1341030:CDS |
| GTTATCCTCCTTGGTAATGT+AGG | 0.401834 | tig0004681:-30488 | Msa1341030:intergenic |
| ACTAATTTGGTTATCCTCCT+TGG | 0.402910 | tig0004681:-30497 | Msa1341030:intergenic |
| TCCAAATATCCATTAATAAA+GGG | 0.404369 | tig0004681:+31416 | Msa1341030:CDS |
| TATACTTACCTTCAGTATCA+TGG | 0.410761 | tig0004681:-31666 | Msa1341030:intergenic |
| AGCATGCGGTCAAGCCTATT+AGG | 0.413248 | tig0004681:-30721 | Msa1341030:intergenic |
| TGAAATATACACTGGATTTG+AGG | 0.429712 | tig0004681:+31334 | Msa1341030:CDS |
| CACAAAGCTTTATCACCAAA+TGG | 0.430052 | tig0004681:+31871 | Msa1341030:CDS |
| AAATAACCTCTACTTTCATC+AGG | 0.441916 | tig0004681:-30850 | Msa1341030:intergenic |
| GAAATATACACTGGATTTGA+GGG | 0.446533 | tig0004681:+31335 | Msa1341030:CDS |
| GTTGATGTTGGAGGTGGAAG+TGG | 0.451719 | tig0004681:+31371 | Msa1341030:CDS |
| ATAGCAGCATTTAACACTGC+TGG | 0.468445 | tig0004681:-30589 | Msa1341030:intergenic |
| CTCATGTTTATCACAGTTGG+TGG | 0.480360 | tig0004681:+31976 | Msa1341030:CDS |
| TATGTTTGCAAGTGTTCCAC+AGG | 0.500462 | tig0004681:+31637 | Msa1341030:CDS |
| ATATCAACATTAGTTGATGT+TGG | 0.501358 | tig0004681:+31359 | Msa1341030:CDS |
| ACATTAGTTGATGTTGGAGG+TGG | 0.504612 | tig0004681:+31365 | Msa1341030:CDS |
| GAGAGTTTACGGACTCTCAA+TGG | 0.504711 | tig0004681:+30810 | Msa1341030:CDS |
| TAAGGGATTGAGCATGTTGG+AGG | 0.505746 | tig0004681:+31611 | Msa1341030:intron |
| AATCTCATGTTTATCACAGT+TGG | 0.506086 | tig0004681:+31973 | Msa1341030:CDS |
| CTCGGCACCACCATCCTCAA+TGG | 0.508530 | tig0004681:-30788 | Msa1341030:intergenic |
| TGCTGGATAAACAAGATTAG+TGG | 0.509486 | tig0004681:-30572 | Msa1341030:intergenic |
| TTTATTTGAGATCATAGCTA+AGG | 0.511778 | tig0004681:+30621 | Msa1341030:CDS |
| ATCCTCAATGGTTCGAGTAG+TGG | 0.527799 | tig0004681:-30776 | Msa1341030:intergenic |
| TCCGAGTGCTGCGTTGATGC+TGG | 0.530284 | tig0004681:-30694 | Msa1341030:intergenic |
| TACCAAACTTGTAATAATGC+AGG | 0.531997 | tig0004681:-30901 | Msa1341030:intergenic |
| AAAGTATGAATTCATGGGAA+AGG | 0.556043 | tig0004681:+31241 | Msa1341030:CDS |
| ACCAGCATCAACGCAGCACT+CGG | 0.557596 | tig0004681:+30693 | Msa1341030:CDS |
| TTCCACTACTCGAACCATTG+AGG | 0.558053 | tig0004681:+30774 | Msa1341030:CDS |
| TATCATGTTATACCTGAAAG+TGG | 0.563244 | tig0004681:-31479 | Msa1341030:intergenic |
| GTGACAAAGTATGAATTCAT+GGG | 0.563593 | tig0004681:+31236 | Msa1341030:CDS |
| ATAGCTAAGGCAACACCACC+TGG | 0.567142 | tig0004681:+30634 | Msa1341030:CDS |
| TCAACATTAGTTGATGTTGG+AGG | 0.568137 | tig0004681:+31362 | Msa1341030:CDS |
| AATTTAGAAGCAATTTCAGA+TGG | 0.568884 | tig0004681:-30670 | Msa1341030:intergenic |
| TGAGAGTCCGTAAACTCTCT+CGG | 0.571590 | tig0004681:-30806 | Msa1341030:intergenic |
| AGAATGCTTGAAATATACAC+TGG | 0.575900 | tig0004681:+31326 | Msa1341030:CDS |
| TGTTAAGGGATTGAGCATGT+TGG | 0.581677 | tig0004681:+31608 | Msa1341030:intron |
| CTCTACTTTCATCAGGGACA+AGG | 0.594593 | tig0004681:-30843 | Msa1341030:intergenic |
| ACTGTCTTCAGTTTGTTCTG+AGG | 0.597743 | tig0004681:-30524 | Msa1341030:intergenic |
| CAGTGCATGTCTTTCAGCAA+TGG | 0.602261 | tig0004681:+30543 | Msa1341030:CDS |
| CTTGTCCCTGATGAAAGTAG+AGG | 0.618925 | tig0004681:+30844 | Msa1341030:CDS |
| AAATGGAAAAGTGATTATTG+TGG | 0.620942 | tig0004681:+31888 | Msa1341030:CDS |
| GATGGTGACATGAAAGCACC+AGG | 0.624085 | tig0004681:-30652 | Msa1341030:intergenic |
| GTTTACGGACTCTCAATGGT+CGG | 0.636343 | tig0004681:+30814 | Msa1341030:CDS |
| ACTACTCGAACCATTGAGGA+TGG | 0.639748 | tig0004681:+30778 | Msa1341030:CDS |
| TAGCAAGCAAACGCAGCATG+CGG | 0.640854 | tig0004681:-30735 | Msa1341030:intergenic |
| GGGAAATTCCTACATTACCA+AGG | 0.642464 | tig0004681:+30480 | Msa1341030:CDS |
| AATAACCTCTACTTTCATCA+GGG | 0.648899 | tig0004681:-30849 | Msa1341030:intergenic |
| GGGTGATGCCATGATACTGA+AGG | 0.650842 | tig0004681:+31658 | Msa1341030:CDS |
| ACTCGAACCATTGAGGATGG+TGG | 0.675966 | tig0004681:+30781 | Msa1341030:CDS |
| ATGTTTGCAAGTGTTCCACA+GGG | 0.705139 | tig0004681:+31638 | Msa1341030:CDS |
| AGTATCATGGCATCACCCTG+TGG | 0.705622 | tig0004681:-31653 | Msa1341030:intergenic |
| AAATTCCTACATTACCAAGG+AGG | 0.730361 | tig0004681:+30483 | Msa1341030:CDS |
| CATGTTATACCTGAAAGTGG+TGG | 0.738842 | tig0004681:-31476 | None:intergenic |
| GGTGACATGAAAGCACCAGG+TGG | 0.810388 | tig0004681:-30649 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATACATATATAAAATCAA+GGG | + | tig0004681:30944-30963 | Msa1341030:intron | 15.0% |
| !! | TCATACATATATAAAATCAA+GGG | + | tig0004681:30944-30963 | Msa1341030:intron | 15.0% |
| !! | CTCATACATATATAAAATCA+AGG | + | tig0004681:30943-30962 | Msa1341030:intron | 20.0% |
| !! | ATATTCACCTATTAAACATA+TGG | + | tig0004681:30996-31015 | Msa1341030:intron | 20.0% |
| !!! | CCATTGATTTGTTAAAAATT+TGG | - | tig0004681:31280-31299 | Msa1341030:intergenic | 20.0% |
| !!! | CCAAATTTTTAACAAATCAA+TGG | + | tig0004681:31277-31296 | Msa1341030:CDS | 20.0% |
| !! | ATCCAAATATCCATTAATAA+AGG | + | tig0004681:31415-31434 | Msa1341030:CDS | 20.0% |
| !! | TCCAAATATCCATTAATAAA+GGG | + | tig0004681:31416-31435 | Msa1341030:CDS | 20.0% |
| !! | AAGTTAATTCCCTTTATTAA+TGG | - | tig0004681:31428-31447 | Msa1341030:intergenic | 20.0% |
| !! | AGTAAAACTTTAGTATAAGA+TGG | - | tig0004681:31543-31562 | Msa1341030:intergenic | 20.0% |
| !! | CTCATACATATATAAAATCA+AGG | + | tig0004681:30943-30962 | Msa1341030:intron | 20.0% |
| !! | ATATTCACCTATTAAACATA+TGG | + | tig0004681:30996-31015 | Msa1341030:intron | 20.0% |
| !!! | CCATTGATTTGTTAAAAATT+TGG | - | tig0004681:31280-31299 | Msa1341030:intergenic | 20.0% |
| !!! | CCAAATTTTTAACAAATCAA+TGG | + | tig0004681:31277-31296 | Msa1341030:CDS | 20.0% |
| !! | ATCCAAATATCCATTAATAA+AGG | + | tig0004681:31415-31434 | Msa1341030:CDS | 20.0% |
| !! | TCCAAATATCCATTAATAAA+GGG | + | tig0004681:31416-31435 | Msa1341030:CDS | 20.0% |
| !! | AAGTTAATTCCCTTTATTAA+TGG | - | tig0004681:31428-31447 | Msa1341030:intergenic | 20.0% |
| !! | AGTAAAACTTTAGTATAAGA+TGG | - | tig0004681:31543-31562 | Msa1341030:intergenic | 20.0% |
| !! | TTTATTTGAGATCATAGCTA+AGG | + | tig0004681:30621-30640 | Msa1341030:CDS | 25.0% |
| ! | AATTTAGAAGCAATTTCAGA+TGG | - | tig0004681:30673-30692 | Msa1341030:intergenic | 25.0% |
| ! | ATATCCTCCATATGTTTAAT+AGG | - | tig0004681:31006-31025 | Msa1341030:intergenic | 25.0% |
| ! | GGAGGATATATAAGTTATAA+AGG | + | tig0004681:31017-31036 | Msa1341030:intron | 25.0% |
| ! | TTAAGCTAATTGTAGCAATT+AGG | + | tig0004681:31099-31118 | Msa1341030:intron | 25.0% |
| !!! | TCTTACTTTTGTTCCAATTA+TGG | + | tig0004681:31129-31148 | Msa1341030:intron | 25.0% |
| !! | ATATCAACATTAGTTGATGT+TGG | + | tig0004681:31359-31378 | Msa1341030:CDS | 25.0% |
| !! | TCCCTTTATTAATGGATATT+TGG | - | tig0004681:31420-31439 | Msa1341030:intergenic | 25.0% |
| !! | ATTTTTCATCTGACCAATTA+TGG | - | tig0004681:31828-31847 | Msa1341030:intergenic | 25.0% |
| !!! | ACAATAATCACTTTTCCATT+TGG | - | tig0004681:31889-31908 | Msa1341030:intergenic | 25.0% |
| ! | AAATGGAAAAGTGATTATTG+TGG | + | tig0004681:31888-31907 | Msa1341030:CDS | 25.0% |
| !! | TTTATTTGAGATCATAGCTA+AGG | + | tig0004681:30621-30640 | Msa1341030:CDS | 25.0% |
| ! | AATTTAGAAGCAATTTCAGA+TGG | - | tig0004681:30673-30692 | Msa1341030:intergenic | 25.0% |
| ! | ATATCCTCCATATGTTTAAT+AGG | - | tig0004681:31006-31025 | Msa1341030:intergenic | 25.0% |
| ! | GGAGGATATATAAGTTATAA+AGG | + | tig0004681:31017-31036 | Msa1341030:intron | 25.0% |
| ! | TTAAGCTAATTGTAGCAATT+AGG | + | tig0004681:31099-31118 | Msa1341030:intron | 25.0% |
| !!! | TCTTACTTTTGTTCCAATTA+TGG | + | tig0004681:31129-31148 | Msa1341030:intron | 25.0% |
| !! | ATATCAACATTAGTTGATGT+TGG | + | tig0004681:31359-31378 | Msa1341030:CDS | 25.0% |
| !! | TCCCTTTATTAATGGATATT+TGG | - | tig0004681:31420-31439 | Msa1341030:intergenic | 25.0% |
| !! | ATTTTTCATCTGACCAATTA+TGG | - | tig0004681:31828-31847 | Msa1341030:intergenic | 25.0% |
| !!! | ACAATAATCACTTTTCCATT+TGG | - | tig0004681:31889-31908 | Msa1341030:intergenic | 25.0% |
| ! | AAATGGAAAAGTGATTATTG+TGG | + | tig0004681:31888-31907 | Msa1341030:CDS | 25.0% |
| AATAACCTCTACTTTCATCA+GGG | - | tig0004681:30852-30871 | Msa1341030:intergenic | 30.0% | |
| AAATAACCTCTACTTTCATC+AGG | - | tig0004681:30853-30872 | Msa1341030:intergenic | 30.0% | |
| TGATGAAAGTAGAGGTTATT+TGG | + | tig0004681:30852-30871 | Msa1341030:CDS | 30.0% | |
| ATCCTGCATTATTACAAGTT+TGG | + | tig0004681:30899-30918 | Msa1341030:CDS | 30.0% | |
| TACCAAACTTGTAATAATGC+AGG | - | tig0004681:30904-30923 | Msa1341030:intergenic | 30.0% | |
| AAAATCAAGGGATAGTTACT+TGG | + | tig0004681:30956-30975 | Msa1341030:intron | 30.0% | |
| TTCACCTATTAAACATATGG+AGG | + | tig0004681:30999-31018 | Msa1341030:intron | 30.0% | |
| ACTAAAGCTTAGACCATAAT+TGG | - | tig0004681:31145-31164 | Msa1341030:intergenic | 30.0% | |
| ! | TCTATCCAGGATGAATTTTA+AGG | + | tig0004681:31166-31185 | Msa1341030:intron | 30.0% |
| AGTGACAAAGTATGAATTCA+TGG | + | tig0004681:31235-31254 | Msa1341030:CDS | 30.0% | |
| GTGACAAAGTATGAATTCAT+GGG | + | tig0004681:31236-31255 | Msa1341030:CDS | 30.0% | |
| AAAGTATGAATTCATGGGAA+AGG | + | tig0004681:31241-31260 | Msa1341030:CDS | 30.0% | |
| AGAATGCTTGAAATATACAC+TGG | + | tig0004681:31326-31345 | Msa1341030:CDS | 30.0% | |
| TGAAATATACACTGGATTTG+AGG | + | tig0004681:31334-31353 | Msa1341030:CDS | 30.0% | |
| GAAATATACACTGGATTTGA+GGG | + | tig0004681:31335-31354 | Msa1341030:CDS | 30.0% | |
| ! | TGGTGCATTTTCAATAACTT+GGG | - | tig0004681:31459-31478 | Msa1341030:intergenic | 30.0% |
| TATCATGTTATACCTGAAAG+TGG | - | tig0004681:31482-31501 | Msa1341030:intergenic | 30.0% | |
| ! | TATTCCACCAACTTTTGTTA+AGG | + | tig0004681:31593-31612 | Msa1341030:intron | 30.0% |
| ! | ATTCCACCAACTTTTGTTAA+GGG | + | tig0004681:31594-31613 | Msa1341030:intron | 30.0% |
| TATACTTACCTTCAGTATCA+TGG | - | tig0004681:31669-31688 | Msa1341030:intergenic | 30.0% | |
| ! | GACTTTGTTTGCATAATTGT+AGG | + | tig0004681:31795-31814 | Msa1341030:intron | 30.0% |
| TTAGATTCTTCACTTGTGTT+TGG | - | tig0004681:31934-31953 | Msa1341030:intergenic | 30.0% | |
| AATCTCATGTTTATCACAGT+TGG | + | tig0004681:31973-31992 | Msa1341030:CDS | 30.0% | |
| AATAACCTCTACTTTCATCA+GGG | - | tig0004681:30852-30871 | Msa1341030:intergenic | 30.0% | |
| AAATAACCTCTACTTTCATC+AGG | - | tig0004681:30853-30872 | Msa1341030:intergenic | 30.0% | |
| TGATGAAAGTAGAGGTTATT+TGG | + | tig0004681:30852-30871 | Msa1341030:CDS | 30.0% | |
| ATCCTGCATTATTACAAGTT+TGG | + | tig0004681:30899-30918 | Msa1341030:CDS | 30.0% | |
| TACCAAACTTGTAATAATGC+AGG | - | tig0004681:30904-30923 | Msa1341030:intergenic | 30.0% | |
| AAAATCAAGGGATAGTTACT+TGG | + | tig0004681:30956-30975 | Msa1341030:intron | 30.0% | |
| TTCACCTATTAAACATATGG+AGG | + | tig0004681:30999-31018 | Msa1341030:intron | 30.0% | |
| ACTAAAGCTTAGACCATAAT+TGG | - | tig0004681:31145-31164 | Msa1341030:intergenic | 30.0% | |
| ! | TCTATCCAGGATGAATTTTA+AGG | + | tig0004681:31166-31185 | Msa1341030:intron | 30.0% |
| AGTGACAAAGTATGAATTCA+TGG | + | tig0004681:31235-31254 | Msa1341030:CDS | 30.0% | |
| GTGACAAAGTATGAATTCAT+GGG | + | tig0004681:31236-31255 | Msa1341030:CDS | 30.0% | |
| AAAGTATGAATTCATGGGAA+AGG | + | tig0004681:31241-31260 | Msa1341030:CDS | 30.0% | |
| AGAATGCTTGAAATATACAC+TGG | + | tig0004681:31326-31345 | Msa1341030:CDS | 30.0% | |
| TGAAATATACACTGGATTTG+AGG | + | tig0004681:31334-31353 | Msa1341030:CDS | 30.0% | |
| GAAATATACACTGGATTTGA+GGG | + | tig0004681:31335-31354 | Msa1341030:CDS | 30.0% | |
| ! | TGGTGCATTTTCAATAACTT+GGG | - | tig0004681:31459-31478 | Msa1341030:intergenic | 30.0% |
| TATCATGTTATACCTGAAAG+TGG | - | tig0004681:31482-31501 | Msa1341030:intergenic | 30.0% | |
| ! | TATTCCACCAACTTTTGTTA+AGG | + | tig0004681:31593-31612 | Msa1341030:intron | 30.0% |
| ! | ATTCCACCAACTTTTGTTAA+GGG | + | tig0004681:31594-31613 | Msa1341030:intron | 30.0% |
| TATACTTACCTTCAGTATCA+TGG | - | tig0004681:31669-31688 | Msa1341030:intergenic | 30.0% | |
| ! | GACTTTGTTTGCATAATTGT+AGG | + | tig0004681:31795-31814 | Msa1341030:intron | 30.0% |
| TTAGATTCTTCACTTGTGTT+TGG | - | tig0004681:31934-31953 | Msa1341030:intergenic | 30.0% | |
| AATCTCATGTTTATCACAGT+TGG | + | tig0004681:31973-31992 | Msa1341030:CDS | 30.0% | |
| AAATTCCTACATTACCAAGG+AGG | + | tig0004681:30483-30502 | Msa1341030:CDS | 35.0% | |
| ACTAATTTGGTTATCCTCCT+TGG | - | tig0004681:30500-30519 | Msa1341030:intergenic | 35.0% | |
| TGCTGGATAAACAAGATTAG+TGG | - | tig0004681:30575-30594 | Msa1341030:intergenic | 35.0% | |
| ! | CTAAGCTTTAGTTTCTATCC+AGG | + | tig0004681:31153-31172 | Msa1341030:intron | 35.0% |
| !! | CAGGATGAATTTTAAGGAAG+CGG | + | tig0004681:31172-31191 | Msa1341030:intron | 35.0% |
| ! | TCAACATTAGTTGATGTTGG+AGG | + | tig0004681:31362-31381 | Msa1341030:CDS | 35.0% |
| ! | GGTGCATTTTCAATAACTTG+GGG | - | tig0004681:31458-31477 | Msa1341030:intergenic | 35.0% |
| ! | GTGGTGCATTTTCAATAACT+TGG | - | tig0004681:31460-31479 | Msa1341030:intergenic | 35.0% |
| AATCCCTTAACAAAAGTTGG+TGG | - | tig0004681:31600-31619 | Msa1341030:intergenic | 35.0% | |
| CTCAATCCCTTAACAAAAGT+TGG | - | tig0004681:31603-31622 | Msa1341030:intergenic | 35.0% | |
| ! | CACAAAGCTTTATCACCAAA+TGG | + | tig0004681:31871-31890 | Msa1341030:CDS | 35.0% |
| AAATTCCTACATTACCAAGG+AGG | + | tig0004681:30483-30502 | Msa1341030:CDS | 35.0% | |
| ACTAATTTGGTTATCCTCCT+TGG | - | tig0004681:30500-30519 | Msa1341030:intergenic | 35.0% | |
| TGCTGGATAAACAAGATTAG+TGG | - | tig0004681:30575-30594 | Msa1341030:intergenic | 35.0% | |
| ! | CTAAGCTTTAGTTTCTATCC+AGG | + | tig0004681:31153-31172 | Msa1341030:intron | 35.0% |
| !! | CAGGATGAATTTTAAGGAAG+CGG | + | tig0004681:31172-31191 | Msa1341030:intron | 35.0% |
| ! | TCAACATTAGTTGATGTTGG+AGG | + | tig0004681:31362-31381 | Msa1341030:CDS | 35.0% |
| ! | GGTGCATTTTCAATAACTTG+GGG | - | tig0004681:31458-31477 | Msa1341030:intergenic | 35.0% |
| ! | GTGGTGCATTTTCAATAACT+TGG | - | tig0004681:31460-31479 | Msa1341030:intergenic | 35.0% |
| AATCCCTTAACAAAAGTTGG+TGG | - | tig0004681:31600-31619 | Msa1341030:intergenic | 35.0% | |
| CTCAATCCCTTAACAAAAGT+TGG | - | tig0004681:31603-31622 | Msa1341030:intergenic | 35.0% | |
| ! | CACAAAGCTTTATCACCAAA+TGG | + | tig0004681:31871-31890 | Msa1341030:CDS | 35.0% |
| GGGAAATTCCTACATTACCA+AGG | + | tig0004681:30480-30499 | Msa1341030:CDS | 40.0% | |
| !! | GTTATCCTCCTTGGTAATGT+AGG | - | tig0004681:30491-30510 | Msa1341030:intergenic | 40.0% |
| !! | GTTCTGAGGTAGCACTAATT+TGG | - | tig0004681:30513-30532 | Msa1341030:intergenic | 40.0% |
| ! | ACTGTCTTCAGTTTGTTCTG+AGG | - | tig0004681:30527-30546 | Msa1341030:intergenic | 40.0% |
| ATAGCAGCATTTAACACTGC+TGG | - | tig0004681:30592-30611 | Msa1341030:intergenic | 40.0% | |
| CGCTTCCTTAAAATTCATCC+TGG | - | tig0004681:31174-31193 | Msa1341030:intergenic | 40.0% | |
| !! | GATGAATTTTAAGGAAGCGG+TGG | + | tig0004681:31175-31194 | Msa1341030:CDS | 40.0% |
| ! | GACTTGTTCAAGAACGTTCA+TGG | + | tig0004681:31212-31231 | Msa1341030:CDS | 40.0% |
| ! | ACATTAGTTGATGTTGGAGG+TGG | + | tig0004681:31365-31384 | Msa1341030:CDS | 40.0% |
| CATGTTATACCTGAAAGTGG+TGG | - | tig0004681:31479-31498 | Msa1341030:intergenic | 40.0% | |
| TGTTAAGGGATTGAGCATGT+TGG | + | tig0004681:31608-31627 | Msa1341030:intron | 40.0% | |
| TATGTTTGCAAGTGTTCCAC+AGG | + | tig0004681:31637-31656 | Msa1341030:CDS | 40.0% | |
| ATGTTTGCAAGTGTTCCACA+GGG | + | tig0004681:31638-31657 | Msa1341030:CDS | 40.0% | |
| TGTAGGCTGTATGCCATAAT+TGG | + | tig0004681:31812-31831 | Msa1341030:intron | 40.0% | |
| !! | TCACTTGTGTTTGGTTCTTC+TGG | - | tig0004681:31925-31944 | Msa1341030:intergenic | 40.0% |
| CTCATGTTTATCACAGTTGG+TGG | + | tig0004681:31976-31995 | Msa1341030:CDS | 40.0% | |
| !! | TGTTTATCACAGTTGGTGGA+AGG | + | tig0004681:31980-31999 | Msa1341030:CDS | 40.0% |
| GGGAAATTCCTACATTACCA+AGG | + | tig0004681:30480-30499 | Msa1341030:CDS | 40.0% | |
| !! | GTTATCCTCCTTGGTAATGT+AGG | - | tig0004681:30491-30510 | Msa1341030:intergenic | 40.0% |
| !! | GTTCTGAGGTAGCACTAATT+TGG | - | tig0004681:30513-30532 | Msa1341030:intergenic | 40.0% |
| ! | ACTGTCTTCAGTTTGTTCTG+AGG | - | tig0004681:30527-30546 | Msa1341030:intergenic | 40.0% |
| ATAGCAGCATTTAACACTGC+TGG | - | tig0004681:30592-30611 | Msa1341030:intergenic | 40.0% | |
| CGCTTCCTTAAAATTCATCC+TGG | - | tig0004681:31174-31193 | Msa1341030:intergenic | 40.0% | |
| !! | GATGAATTTTAAGGAAGCGG+TGG | + | tig0004681:31175-31194 | Msa1341030:CDS | 40.0% |
| ! | GACTTGTTCAAGAACGTTCA+TGG | + | tig0004681:31212-31231 | Msa1341030:CDS | 40.0% |
| ! | ACATTAGTTGATGTTGGAGG+TGG | + | tig0004681:31365-31384 | Msa1341030:CDS | 40.0% |
| CATGTTATACCTGAAAGTGG+TGG | - | tig0004681:31479-31498 | Msa1341030:intergenic | 40.0% | |
| TGTTAAGGGATTGAGCATGT+TGG | + | tig0004681:31608-31627 | Msa1341030:intron | 40.0% | |
| TATGTTTGCAAGTGTTCCAC+AGG | + | tig0004681:31637-31656 | Msa1341030:CDS | 40.0% | |
| ATGTTTGCAAGTGTTCCACA+GGG | + | tig0004681:31638-31657 | Msa1341030:CDS | 40.0% | |
| TGTAGGCTGTATGCCATAAT+TGG | + | tig0004681:31812-31831 | Msa1341030:intron | 40.0% | |
| !! | TCACTTGTGTTTGGTTCTTC+TGG | - | tig0004681:31925-31944 | Msa1341030:intergenic | 40.0% |
| CTCATGTTTATCACAGTTGG+TGG | + | tig0004681:31976-31995 | Msa1341030:CDS | 40.0% | |
| CAGTGCATGTCTTTCAGCAA+TGG | + | tig0004681:30543-30562 | Msa1341030:CDS | 45.0% | |
| TTCCACTACTCGAACCATTG+AGG | + | tig0004681:30774-30793 | Msa1341030:CDS | 45.0% | |
| ATCCTCAATGGTTCGAGTAG+TGG | - | tig0004681:30779-30798 | Msa1341030:intergenic | 45.0% | |
| ACTACTCGAACCATTGAGGA+TGG | + | tig0004681:30778-30797 | Msa1341030:CDS | 45.0% | |
| TGAGAGTCCGTAAACTCTCT+CGG | - | tig0004681:30809-30828 | Msa1341030:intergenic | 45.0% | |
| GAGAGTTTACGGACTCTCAA+TGG | + | tig0004681:30810-30829 | Msa1341030:CDS | 45.0% | |
| GTTTACGGACTCTCAATGGT+CGG | + | tig0004681:30814-30833 | Msa1341030:CDS | 45.0% | |
| CTCTACTTTCATCAGGGACA+AGG | - | tig0004681:30846-30865 | Msa1341030:intergenic | 45.0% | |
| CTTGTCCCTGATGAAAGTAG+AGG | + | tig0004681:30844-30863 | Msa1341030:CDS | 45.0% | |
| !! | GAATTTTAAGGAAGCGGTGG+TGG | + | tig0004681:31178-31197 | Msa1341030:CDS | 45.0% |
| GAAAATGCACCACCACTTTC+AGG | + | tig0004681:31467-31486 | Msa1341030:CDS | 45.0% | |
| TAAGGGATTGAGCATGTTGG+AGG | + | tig0004681:31611-31630 | Msa1341030:intron | 45.0% | |
| CAGTGCATGTCTTTCAGCAA+TGG | + | tig0004681:30543-30562 | Msa1341030:CDS | 45.0% | |
| TTCCACTACTCGAACCATTG+AGG | + | tig0004681:30774-30793 | Msa1341030:CDS | 45.0% | |
| ATCCTCAATGGTTCGAGTAG+TGG | - | tig0004681:30779-30798 | Msa1341030:intergenic | 45.0% | |
| ACTACTCGAACCATTGAGGA+TGG | + | tig0004681:30778-30797 | Msa1341030:CDS | 45.0% | |
| TGAGAGTCCGTAAACTCTCT+CGG | - | tig0004681:30809-30828 | Msa1341030:intergenic | 45.0% | |
| GAGAGTTTACGGACTCTCAA+TGG | + | tig0004681:30810-30829 | Msa1341030:CDS | 45.0% | |
| GTTTACGGACTCTCAATGGT+CGG | + | tig0004681:30814-30833 | Msa1341030:CDS | 45.0% | |
| CTCTACTTTCATCAGGGACA+AGG | - | tig0004681:30846-30865 | Msa1341030:intergenic | 45.0% | |
| CTTGTCCCTGATGAAAGTAG+AGG | + | tig0004681:30844-30863 | Msa1341030:CDS | 45.0% | |
| !! | GAATTTTAAGGAAGCGGTGG+TGG | + | tig0004681:31178-31197 | Msa1341030:CDS | 45.0% |
| GAAAATGCACCACCACTTTC+AGG | + | tig0004681:31467-31486 | Msa1341030:CDS | 45.0% | |
| TAAGGGATTGAGCATGTTGG+AGG | + | tig0004681:31611-31630 | Msa1341030:intron | 45.0% | |
| ATAGCTAAGGCAACACCACC+TGG | + | tig0004681:30634-30653 | Msa1341030:CDS | 50.0% | |
| !! | GATGGTGACATGAAAGCACC+AGG | - | tig0004681:30655-30674 | Msa1341030:intergenic | 50.0% |
| AGCACTCGGACTTGCCTAAT+AGG | + | tig0004681:30707-30726 | Msa1341030:CDS | 50.0% | |
| AGCATGCGGTCAAGCCTATT+AGG | - | tig0004681:30724-30743 | Msa1341030:intergenic | 50.0% | |
| TAGCAAGCAAACGCAGCATG+CGG | - | tig0004681:30738-30757 | Msa1341030:intergenic | 50.0% | |
| ACTCGAACCATTGAGGATGG+TGG | + | tig0004681:30781-30800 | Msa1341030:CDS | 50.0% | |
| GTTGATGTTGGAGGTGGAAG+TGG | + | tig0004681:31371-31390 | Msa1341030:CDS | 50.0% | |
| AGTATCATGGCATCACCCTG+TGG | - | tig0004681:31656-31675 | Msa1341030:intergenic | 50.0% | |
| GGGTGATGCCATGATACTGA+AGG | + | tig0004681:31658-31677 | Msa1341030:CDS | 50.0% | |
| ATAGCTAAGGCAACACCACC+TGG | + | tig0004681:30634-30653 | Msa1341030:CDS | 50.0% | |
| !! | GATGGTGACATGAAAGCACC+AGG | - | tig0004681:30655-30674 | Msa1341030:intergenic | 50.0% |
| AGCACTCGGACTTGCCTAAT+AGG | + | tig0004681:30707-30726 | Msa1341030:CDS | 50.0% | |
| AGCATGCGGTCAAGCCTATT+AGG | - | tig0004681:30724-30743 | Msa1341030:intergenic | 50.0% | |
| TAGCAAGCAAACGCAGCATG+CGG | - | tig0004681:30738-30757 | Msa1341030:intergenic | 50.0% | |
| ACTCGAACCATTGAGGATGG+TGG | + | tig0004681:30781-30800 | Msa1341030:CDS | 50.0% | |
| GTTGATGTTGGAGGTGGAAG+TGG | + | tig0004681:31371-31390 | Msa1341030:CDS | 50.0% | |
| AGTATCATGGCATCACCCTG+TGG | - | tig0004681:31656-31675 | Msa1341030:intergenic | 50.0% | |
| GGGTGATGCCATGATACTGA+AGG | + | tig0004681:31658-31677 | Msa1341030:CDS | 50.0% | |
| !! | GGTGACATGAAAGCACCAGG+TGG | - | tig0004681:30652-30671 | Msa1341030:intergenic | 55.0% |
| ACCAGCATCAACGCAGCACT+CGG | + | tig0004681:30693-30712 | Msa1341030:CDS | 55.0% | |
| ! | GGTGGTGCCGAGAGAGTTTA+CGG | + | tig0004681:30799-30818 | Msa1341030:CDS | 55.0% |
| !! | GGTGACATGAAAGCACCAGG+TGG | - | tig0004681:30652-30671 | Msa1341030:intergenic | 55.0% |
| ACCAGCATCAACGCAGCACT+CGG | + | tig0004681:30693-30712 | Msa1341030:CDS | 55.0% | |
| ! | GGTGGTGCCGAGAGAGTTTA+CGG | + | tig0004681:30799-30818 | Msa1341030:CDS | 55.0% |
| ! | TCCGAGTGCTGCGTTGATGC+TGG | - | tig0004681:30697-30716 | Msa1341030:intergenic | 60.0% |
| CTCGGCACCACCATCCTCAA+TGG | - | tig0004681:30791-30810 | Msa1341030:intergenic | 60.0% | |
| ! | TCCGAGTGCTGCGTTGATGC+TGG | - | tig0004681:30697-30716 | Msa1341030:intergenic | 60.0% |
| CTCGGCACCACCATCCTCAA+TGG | - | tig0004681:30791-30810 | Msa1341030:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004681 | gene | 30478 | 32002 | 30478 | ID=Msa1341030;Name=Msa1341030 |
| tig0004681 | mRNA | 30478 | 32002 | 30478 | ID=Msa1341030-mRNA-1;Parent=Msa1341030;Name=Msa1341030-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|4|0|336 |
| tig0004681 | exon | 30478 | 30920 | 30478 | ID=Msa1341030-mRNA-1:exon:2952;Parent=Msa1341030-mRNA-1 |
| tig0004681 | exon | 31175 | 31488 | 31175 | ID=Msa1341030-mRNA-1:exon:2953;Parent=Msa1341030-mRNA-1 |
| tig0004681 | exon | 31615 | 31679 | 31615 | ID=Msa1341030-mRNA-1:exon:2954;Parent=Msa1341030-mRNA-1 |
| tig0004681 | exon | 31817 | 32002 | 31817 | ID=Msa1341030-mRNA-1:exon:2955;Parent=Msa1341030-mRNA-1 |
| tig0004681 | CDS | 30478 | 30920 | 30478 | ID=Msa1341030-mRNA-1:cds;Parent=Msa1341030-mRNA-1 |
| tig0004681 | CDS | 31175 | 31488 | 31175 | ID=Msa1341030-mRNA-1:cds;Parent=Msa1341030-mRNA-1 |
| tig0004681 | CDS | 31615 | 31679 | 31615 | ID=Msa1341030-mRNA-1:cds;Parent=Msa1341030-mRNA-1 |
| tig0004681 | CDS | 31817 | 32002 | 31817 | ID=Msa1341030-mRNA-1:cds;Parent=Msa1341030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
