Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490750 | XP_024633779.1 | 94.132 | 801 | 42 | 3 | 34 | 833 | 1 | 797 | 0.0 | 1569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490750 | sp|Q9CA78|NMAT4_ARATH | 56.147 | 789 | 314 | 9 | 51 | 833 | 36 | 798 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490750 | A0A396ILS7 | 94.132 | 801 | 42 | 3 | 34 | 833 | 1 | 797 | 0.0 | 1569 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010020 | Msa0490750 | 0.804447 | 2.151288e-49 | -8.615850e-47 |
| Msa0014570 | Msa0490750 | 0.803175 | 3.951474e-49 | -8.615850e-47 |
| Msa0016670 | Msa0490750 | 0.801971 | 6.999700e-49 | -8.615850e-47 |
| Msa0018620 | Msa0490750 | 0.811142 | 8.116247e-51 | -8.615850e-47 |
| Msa0027390 | Msa0490750 | 0.811167 | 8.015287e-51 | -8.615850e-47 |
| Msa0032840 | Msa0490750 | -0.803332 | 3.666492e-49 | -8.615850e-47 |
| Msa0046100 | Msa0490750 | 0.807924 | 3.985162e-50 | -8.615850e-47 |
| Msa0081360 | Msa0490750 | 0.803365 | 3.609311e-49 | -8.615850e-47 |
| Msa0090590 | Msa0490750 | 0.802900 | 4.504605e-49 | -8.615850e-47 |
| Msa0101880 | Msa0490750 | 0.815575 | 8.615711e-52 | -8.615850e-47 |
| Msa0110970 | Msa0490750 | 0.803815 | 2.910962e-49 | -8.615850e-47 |
| Msa0114540 | Msa0490750 | -0.828562 | 8.390630e-55 | -8.615850e-47 |
| Msa0124340 | Msa0490750 | 0.800782 | 1.226102e-48 | -8.615850e-47 |
| Msa0140960 | Msa0490750 | 0.813223 | 2.854284e-51 | -8.615850e-47 |
| Msa0143380 | Msa0490750 | 0.803759 | 2.991105e-49 | -8.615850e-47 |
| Msa0144360 | Msa0490750 | 0.814065 | 1.862768e-51 | -8.615850e-47 |
| Msa0145070 | Msa0490750 | 0.849124 | 3.954123e-60 | -8.615850e-47 |
| Msa0146260 | Msa0490750 | 0.815183 | 1.053420e-51 | -8.615850e-47 |
| Msa0165300 | Msa0490750 | 0.807064 | 6.065890e-50 | -8.615850e-47 |
| Msa0181230 | Msa0490750 | 0.800988 | 1.113068e-48 | -8.615850e-47 |
| Msa0183830 | Msa0490750 | 0.805433 | 1.338299e-49 | -8.615850e-47 |
| Msa0191250 | Msa0490750 | 0.803652 | 3.147102e-49 | -8.615850e-47 |
| Msa0197660 | Msa0490750 | 0.808418 | 3.128036e-50 | -8.615850e-47 |
| Msa0197890 | Msa0490750 | 0.809284 | 2.041771e-50 | -8.615850e-47 |
| Msa0230550 | Msa0490750 | -0.804026 | 2.631673e-49 | -8.615850e-47 |
| Msa0369850 | Msa0490750 | 0.814182 | 1.754544e-51 | -8.615850e-47 |
| Msa0395790 | Msa0490750 | 0.800637 | 1.312689e-48 | -8.615850e-47 |
| Msa0410500 | Msa0490750 | 0.804932 | 1.703940e-49 | -8.615850e-47 |
| Msa0419820 | Msa0490750 | 0.809160 | 2.170073e-50 | -8.615850e-47 |
| Msa0423900 | Msa0490750 | 0.817877 | 2.624911e-52 | -8.615850e-47 |
| Msa0428050 | Msa0490750 | 0.802433 | 5.624312e-49 | -8.615850e-47 |
| Msa0428240 | Msa0490750 | 0.801039 | 1.086890e-48 | -8.615850e-47 |
| Msa0431770 | Msa0490750 | 0.813342 | 2.687050e-51 | -8.615850e-47 |
| Msa0436280 | Msa0490750 | -0.815863 | 7.434045e-52 | -8.615850e-47 |
| Msa0459700 | Msa0490750 | 0.808921 | 2.441953e-50 | -8.615850e-47 |
| Msa0462990 | Msa0490750 | 0.816194 | 6.269978e-52 | -8.615850e-47 |
| Msa0475790 | Msa0490750 | 0.803041 | 4.212869e-49 | -8.615850e-47 |
| Msa0239800 | Msa0490750 | 0.812823 | 3.491373e-51 | -8.615850e-47 |
| Msa0253290 | Msa0490750 | 0.806773 | 6.990174e-50 | -8.615850e-47 |
| Msa0300690 | Msa0490750 | 0.803683 | 3.101522e-49 | -8.615850e-47 |
| Msa0310410 | Msa0490750 | 0.840315 | 9.361661e-58 | -8.615850e-47 |
| Msa0311860 | Msa0490750 | 0.805463 | 1.318966e-49 | -8.615850e-47 |
| Msa0314210 | Msa0490750 | 0.800351 | 1.501131e-48 | -8.615850e-47 |
| Msa0317510 | Msa0490750 | 0.816286 | 5.981276e-52 | -8.615850e-47 |
| Msa0317730 | Msa0490750 | 0.808773 | 2.627304e-50 | -8.615850e-47 |
| Msa0320100 | Msa0490750 | 0.807309 | 5.384292e-50 | -8.615850e-47 |
| Msa0355270 | Msa0490750 | 0.803516 | 3.358919e-49 | -8.615850e-47 |
| Msa0362780 | Msa0490750 | 0.803083 | 4.129199e-49 | -8.615850e-47 |
| Msa0485990 | Msa0490750 | 0.802065 | 6.696371e-49 | -8.615850e-47 |
| Msa0490750 | Msa0511310 | 0.809123 | 2.210942e-50 | -8.615850e-47 |
| Msa0490750 | Msa0515640 | 0.820507 | 6.614471e-53 | -8.615850e-47 |
| Msa0490750 | Msa0519130 | 0.802756 | 4.824701e-49 | -8.615850e-47 |
| Msa0490750 | Msa0663250 | 0.803646 | 3.156063e-49 | -8.615850e-47 |
| Msa0490750 | Msa0664960 | 0.818544 | 1.854797e-52 | -8.615850e-47 |
| Msa0490750 | Msa0690520 | 0.818017 | 2.441151e-52 | -8.615850e-47 |
| Msa0490750 | Msa0691050 | 0.801692 | 7.985687e-49 | -8.615850e-47 |
| Msa0490750 | Msa0701280 | 0.844159 | 8.982169e-59 | -8.615850e-47 |
| Msa0490750 | Msa0702340 | 0.816762 | 4.678609e-52 | -8.615850e-47 |
| Msa0490750 | Msa0702590 | 0.806615 | 7.549509e-50 | -8.615850e-47 |
| Msa0490750 | Msa0702660 | 0.815607 | 8.476975e-52 | -8.615850e-47 |
| Msa0490750 | Msa0737570 | 0.801493 | 8.771663e-49 | -8.615850e-47 |
| Msa0490750 | Msa0743680 | 0.817176 | 3.777241e-52 | -8.615850e-47 |
| Msa0490750 | Msa0743800 | 0.806549 | 7.792925e-50 | -8.615850e-47 |
| Msa0490750 | Msa0744040 | 0.823788 | 1.147182e-53 | -8.615850e-47 |
| Msa0490750 | Msa0784380 | 0.807067 | 6.056950e-50 | -8.615850e-47 |
| Msa0490750 | Msa0784620 | 0.800470 | 1.419454e-48 | -8.615850e-47 |
| Msa0490750 | Msa0824640 | 0.801673 | 8.057621e-49 | -8.615850e-47 |
| Msa0490750 | Msa0824660 | 0.802123 | 6.513429e-49 | -8.615850e-47 |
| Msa0490750 | Msa0829620 | 0.807701 | 4.445354e-50 | -8.615850e-47 |
| Msa0490750 | Msa0850960 | 0.851754 | 7.224691e-61 | -8.615850e-47 |
| Msa0490750 | Msa0856920 | 0.807681 | 4.488798e-50 | -8.615850e-47 |
| Msa0490750 | Msa0863930 | 0.809953 | 1.466062e-50 | -8.615850e-47 |
| Msa0490750 | Msa0864010 | 0.804825 | 1.793570e-49 | -8.615850e-47 |
| Msa0490750 | Msa0867890 | 0.802640 | 5.096256e-49 | -8.615850e-47 |
| Msa0490750 | Msa0876200 | 0.810364 | 1.196074e-50 | -8.615850e-47 |
| Msa0490750 | Msa0897900 | 0.801973 | 6.992844e-49 | -8.615850e-47 |
| Msa0490750 | Msa0906690 | 0.802333 | 5.896559e-49 | -8.615850e-47 |
| Msa0490750 | Msa0930780 | 0.815922 | 7.210186e-52 | -8.615850e-47 |
| Msa0490750 | Msa0970420 | 0.802796 | 4.733609e-49 | -8.615850e-47 |
| Msa0490750 | Msa0980940 | 0.810088 | 1.371285e-50 | -8.615850e-47 |
| Msa0490750 | Msa1004420 | 0.825894 | 3.653672e-54 | -8.615850e-47 |
| Msa0490750 | Msa1050910 | 0.804103 | 2.536092e-49 | -8.615850e-47 |
| Msa0490750 | Msa1051600 | 0.804430 | 2.168354e-49 | -8.615850e-47 |
| Msa0490750 | Msa1082700 | 0.813149 | 2.962221e-51 | -8.615850e-47 |
| Msa0490750 | Msa1127830 | 0.807121 | 5.899720e-50 | -8.615850e-47 |
| Msa0490750 | Msa1127890 | 0.802377 | 5.774851e-49 | -8.615850e-47 |
| Msa0490750 | Msa1139810 | 0.805079 | 1.587189e-49 | -8.615850e-47 |
| Msa0490750 | Msa1179940 | 0.805371 | 1.378733e-49 | -8.615850e-47 |
| Msa0490750 | Msa1179970 | 0.808494 | 3.013156e-50 | -8.615850e-47 |
| Msa0490750 | Msa1203250 | 0.805912 | 1.061641e-49 | -8.615850e-47 |
| Msa0490750 | Msa1208160 | 0.813072 | 3.080343e-51 | -8.615850e-47 |
| Msa0490750 | Msa1224830 | 0.818814 | 1.610948e-52 | -8.615850e-47 |
| Msa0490750 | Msa1224840 | 0.813996 | 1.928608e-51 | -8.615850e-47 |
| Msa0490750 | Msa1231550 | 0.810866 | 9.315687e-51 | -8.615850e-47 |
| Msa0490750 | Msa1264020 | 0.802805 | 4.711636e-49 | -8.615850e-47 |
| Msa0490750 | Msa1269580 | -0.820598 | 6.303201e-53 | -8.615850e-47 |
| Msa0490750 | Msa1276660 | 0.804783 | 1.829839e-49 | -8.615850e-47 |
| Msa0490750 | Msa1298370 | 0.806045 | 9.951730e-50 | -8.615850e-47 |
| Msa0490750 | Msa1331590 | 0.806810 | 6.865528e-50 | -8.615850e-47 |
| Msa0490750 | Msa1345360 | 0.803179 | 3.944342e-49 | -8.615850e-47 |
| Msa0490750 | Msa1346370 | 0.808870 | 2.504372e-50 | -8.615850e-47 |
| Msa0490750 | Msa1369150 | 0.810989 | 8.762275e-51 | -8.615850e-47 |
| Msa0490750 | Msa1372310 | 0.833621 | 4.799911e-56 | -8.615850e-47 |
| Msa0490750 | Msa1373330 | 0.806501 | 7.979391e-50 | -8.615850e-47 |
| Msa0490750 | Msa1374040 | 0.811032 | 8.576089e-51 | -8.615850e-47 |
| Msa0490750 | Msa1427060 | 0.803797 | 2.936730e-49 | -8.615850e-47 |
| Msa0490750 | Msa1429360 | -0.812806 | 3.522443e-51 | -8.615850e-47 |
| Msa0490750 | Msa1459180 | 0.805617 | 1.224251e-49 | -8.615850e-47 |
| Msa0490750 | Msa1460020 | 0.802379 | 5.770445e-49 | -8.615850e-47 |
| Msa0490750 | Msa1461300 | 0.812108 | 5.003389e-51 | -8.615850e-47 |
| Msa0490750 | Msa1461490 | 0.824756 | 6.794802e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490750 | MtrunA17_Chr3g0081661 | 94.132 | 801 | 42 | 3 | 34 | 833 | 1 | 797 | 0.0 | 1569 |
| Msa0490750 | MtrunA17_Chr6g0453291 | 28.101 | 790 | 446 | 20 | 84 | 829 | 23 | 734 | 7.37e-72 | 251 |
| Msa0490750 | MtrunA17_Chr4g0045621 | 27.904 | 792 | 447 | 20 | 84 | 829 | 23 | 736 | 2.20e-71 | 249 |
| Msa0490750 | MtrunA17_MTg0490851 | 32.836 | 134 | 84 | 3 | 221 | 353 | 1 | 129 | 1.73e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0490750 | AT1G74350.1 | 56.701 | 776 | 304 | 9 | 64 | 833 | 4 | 753 | 0.0 | 866 |
| Msa0490750 | AT5G04050.1 | 26.599 | 594 | 350 | 15 | 117 | 678 | 58 | 597 | 6.66e-52 | 192 |
| Msa0490750 | AT5G04050.2 | 27.255 | 499 | 288 | 13 | 117 | 594 | 58 | 502 | 3.13e-43 | 168 |
| Msa0490750 | ATMG00520.1 | 32.192 | 146 | 91 | 4 | 209 | 353 | 7 | 145 | 4.83e-12 | 70.1 |
Find 209 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTTACTGTATTAGGTTTA+TGG | 0.137849 | 3_4:-12407655 | Msa0490750:CDS |
| GCGTTATCTTCGCCGCATTT+TGG | 0.175725 | 3_4:+12408371 | None:intergenic |
| TTGAGTTGCATACGGGTTTC+GGG | 0.217797 | 3_4:+12408548 | None:intergenic |
| ACCTCTTCTTTCTCCTTTCC+AGG | 0.222374 | 3_4:-12408779 | Msa0490750:intron |
| TGCATACGGGTTTCGGGTTT+AGG | 0.241241 | 3_4:+12408554 | None:intergenic |
| TTTGAGTTGCATACGGGTTT+CGG | 0.261240 | 3_4:+12408547 | None:intergenic |
| GTGTTAAAGTTTACTGTATT+AGG | 0.266445 | 3_4:-12407662 | Msa0490750:CDS |
| AGCTCGAGGCTTGGAATTAC+GGG | 0.270404 | 3_4:-12407386 | Msa0490750:CDS |
| TTGTGATCATAAACTTTATC+AGG | 0.274033 | 3_4:-12406310 | Msa0490750:three_prime_UTR |
| ATTGAAGATGAAGGTTCTAT+TGG | 0.277816 | 3_4:-12406245 | Msa0490750:three_prime_UTR |
| TGCTAACGTTAATGATATAA+AGG | 0.281640 | 3_4:-12406821 | Msa0490750:CDS |
| CATTTGAAGGATTTGTATCT+TGG | 0.285352 | 3_4:-12406388 | Msa0490750:CDS |
| CGGTTTGTGTTTGTTGTCTT+TGG | 0.296644 | 3_4:-12406590 | Msa0490750:CDS |
| GGGTTTAGGGTTAGTGGTGG+TGG | 0.308270 | 3_4:+12408568 | None:intergenic |
| ACAACTCTCAGCTTCAAATT+AGG | 0.314092 | 3_4:+12408185 | None:intergenic |
| TATGCAACTCAAACGCTTCC+TGG | 0.320694 | 3_4:-12408537 | Msa0490750:CDS |
| TCTGTTGAACTGTTATTATT+CGG | 0.321627 | 3_4:+12407033 | None:intergenic |
| CTGTTTCATAAACTCATAAA+AGG | 0.323172 | 3_4:+12407104 | None:intergenic |
| AGAACTGTCACCGTTATCTT+TGG | 0.325241 | 3_4:+12408349 | None:intergenic |
| AACCTTCATCTTCAATGAAA+TGG | 0.338729 | 3_4:+12406252 | None:intergenic |
| CGACGGTTTGGATTAAGTTA+TGG | 0.344493 | 3_4:+12408462 | None:intergenic |
| TTTGAAGCTGAGAGTTGTTC+AGG | 0.345179 | 3_4:-12408180 | Msa0490750:CDS |
| ATAAACTTTATCAGGATGTT+TGG | 0.350196 | 3_4:-12406302 | Msa0490750:three_prime_UTR |
| AAGCTCGAGGCTTGGAATTA+CGG | 0.353247 | 3_4:-12407387 | Msa0490750:CDS |
| GCATACGGGTTTCGGGTTTA+GGG | 0.353642 | 3_4:+12408555 | None:intergenic |
| GTCTAAGTTCGTCGGAGAAC+CGG | 0.354417 | 3_4:-12407151 | Msa0490750:CDS |
| GTAAGCGTCTGTGAGGGTTT+GGG | 0.363793 | 3_4:+12408430 | None:intergenic |
| TAGGGGCTGGTAGCGGTATT+CGG | 0.373181 | 3_4:-12407506 | Msa0490750:CDS |
| GAGCGAGGGACTGCATGATA+TGG | 0.377996 | 3_4:-12403284 | Msa0490750:three_prime_UTR |
| CGAGCTCTGCATTGCGCGGT+TGG | 0.387488 | 3_4:-12407725 | Msa0490750:CDS |
| AAGTCTCCAAGCTGGAAAAC+CGG | 0.388521 | 3_4:-12406469 | Msa0490750:CDS |
| CAATGATCGGTTTCCATCCC+AGG | 0.389326 | 3_4:+12407246 | None:intergenic |
| ATTTGTAGTGGTGGTGAGTT+TGG | 0.390685 | 3_4:+12408841 | None:intergenic |
| GGAATTTGATGGTGCATTGA+TGG | 0.390818 | 3_4:-12408003 | Msa0490750:CDS |
| TGTGATATCCTCGAGAAATT+CGG | 0.391460 | 3_4:+12408122 | None:intergenic |
| GGTTTCGGGTTTAGGGTTAG+TGG | 0.392559 | 3_4:+12408562 | None:intergenic |
| CTCCATTTCATTGAAGATGA+AGG | 0.393323 | 3_4:-12406254 | Msa0490750:three_prime_UTR |
| GAGATAGAAAAGCGGTTTGA+TGG | 0.394622 | 3_4:-12406727 | Msa0490750:CDS |
| TGTTTGATAGTGAGTTTCAT+AGG | 0.396676 | 3_4:-12407806 | Msa0490750:CDS |
| ATAAGCATTTGTTGAAGATA+TGG | 0.402673 | 3_4:-12407221 | Msa0490750:CDS |
| ATTCAATACTTACTACTTGC+CGG | 0.405689 | 3_4:-12406197 | Msa0490750:three_prime_UTR |
| GGTTTAGGGTTAGTGGTGGT+GGG | 0.408064 | 3_4:+12408569 | None:intergenic |
| TGTAAGCGTCTGTGAGGGTT+TGG | 0.408408 | 3_4:+12408429 | None:intergenic |
| CGAGGATATCACACGGTTGT+AGG | 0.411461 | 3_4:-12408112 | Msa0490750:CDS |
| AGATAAATATTCATCAAAAT+CGG | 0.413094 | 3_4:+12407834 | None:intergenic |
| TTCATCCAAGCTTAAATAAA+CGG | 0.413342 | 3_4:-12406432 | Msa0490750:CDS |
| TAGAAGTATGTTTGATGCTA+GGG | 0.421475 | 3_4:-12407922 | Msa0490750:CDS |
| CTTGCCGTTGTTGTTGAGTT+GGG | 0.426312 | 3_4:+12408487 | None:intergenic |
| TTGCTTGCCGCTGGCTGAAA+TGG | 0.428587 | 3_4:-12406855 | Msa0490750:CDS |
| CTTTGCAGAAGCTCGAGGCT+TGG | 0.431185 | 3_4:-12407395 | Msa0490750:CDS |
| AACGATGAGGCGTTAATGTA+TGG | 0.433777 | 3_4:-12406625 | Msa0490750:CDS |
| TTAGAAGTATGTTTGATGCT+AGG | 0.437265 | 3_4:-12407923 | Msa0490750:CDS |
| ATACAGGCGAAATTATTGAT+TGG | 0.438635 | 3_4:-12406888 | Msa0490750:CDS |
| CGGCTAGAATAGGGAAGAAA+TGG | 0.442179 | 3_4:-12407362 | Msa0490750:CDS |
| GTACTTTAGCAACAAAGTAT+AGG | 0.443287 | 3_4:-12406762 | Msa0490750:CDS |
| GTTTCCCATTTCCGAAAACC+TGG | 0.445903 | 3_4:-12407264 | Msa0490750:CDS |
| AAAGTATAGGATACACGAAA+TGG | 0.446145 | 3_4:-12406749 | Msa0490750:CDS |
| TGATAGTGAGTTTCATAGGT+TGG | 0.448015 | 3_4:-12407802 | Msa0490750:CDS |
| TAGTAGCTCTCTCCTTAGTA+AGG | 0.448943 | 3_4:-12407286 | Msa0490750:CDS |
| ATAGACAGGAGCAATGATTT+CGG | 0.450989 | 3_4:+12406993 | None:intergenic |
| GGGGATTTGAAACGACGGTT+TGG | 0.451880 | 3_4:+12408450 | None:intergenic |
| AGTCTATACTCTTCATGTAA+TGG | 0.452562 | 3_4:-12406500 | Msa0490750:CDS |
| CATAAACTCATAAAAGGAAT+CGG | 0.453544 | 3_4:+12407110 | None:intergenic |
| AATACAGTAAACTTTAACAC+TGG | 0.454882 | 3_4:+12407665 | None:intergenic |
| TCACTTCAGTCTGTTGACTT+TGG | 0.455223 | 3_4:-12406358 | Msa0490750:CDS |
| TCAAAGTTTGACGGTGTTTG+AGG | 0.455355 | 3_4:-12403247 | Msa0490750:three_prime_UTR |
| TTCGGGTTTAGGGTTAGTGG+TGG | 0.455759 | 3_4:+12408565 | None:intergenic |
| TAAGCGTCTGTGAGGGTTTG+GGG | 0.457864 | 3_4:+12408431 | None:intergenic |
| GCTCACCTTGATGCCATTGT+AGG | 0.458734 | 3_4:+12403303 | None:intergenic |
| ATTACGGGACGGCTAGAATA+GGG | 0.460886 | 3_4:-12407371 | Msa0490750:CDS |
| TTTCGGGGATTGCTTGCCGC+TGG | 0.466701 | 3_4:-12406864 | Msa0490750:CDS |
| TAATAACAGTTCAACAGAAC+AGG | 0.466980 | 3_4:-12407028 | Msa0490750:CDS |
| GGCGATGGAGAGGGTGTTGG+TGG | 0.468500 | 3_4:-12407756 | Msa0490750:CDS |
| AACACAGAATCTATTCCAAC+AGG | 0.470553 | 3_4:-12408873 | Msa0490750:CDS |
| CCATTTCCGAAAACCTGGGA+TGG | 0.472562 | 3_4:-12407259 | Msa0490750:CDS |
| GTTAACTCTTGCGGAAGAGC+CGG | 0.473225 | 3_4:+12407132 | None:intergenic |
| GTTGTGTAAGCAACATTTGA+AGG | 0.476227 | 3_4:-12406401 | Msa0490750:CDS |
| CTTAGCTTGGCCTCCTACAA+TGG | 0.478071 | 3_4:-12403316 | Msa0490750:three_prime_UTR |
| ACAATTACACGGTCTTGCTT+CGG | 0.480014 | 3_4:+12406555 | None:intergenic |
| AGTCGCCGTTTATTTAAGCT+TGG | 0.480607 | 3_4:+12406427 | None:intergenic |
| TGGTGCATTGATGGAGAAGT+TGG | 0.483393 | 3_4:-12407994 | Msa0490750:CDS |
| TATGAAGGTGTGCACGGCGA+TGG | 0.484879 | 3_4:-12407771 | Msa0490750:CDS |
| GGTTTGATGGAGAACTTAGC+AGG | 0.485510 | 3_4:-12406714 | Msa0490750:CDS |
| AGTAAAGTAAACCACCAATC+AGG | 0.486557 | 3_4:+12408035 | None:intergenic |
| AATTACGGGACGGCTAGAAT+AGG | 0.486925 | 3_4:-12407372 | Msa0490750:CDS |
| GCATGATTTCCTAATTTGAT+CGG | 0.488312 | 3_4:+12406789 | None:intergenic |
| ACACCTGATGTAGGATGATA+AGG | 0.490894 | 3_4:+12405661 | None:intergenic |
| ATGAATTGCATTGCAGAGAC+GGG | 0.492189 | 3_4:-12406220 | Msa0490750:three_prime_UTR |
| TTTGAAAGAATCCTTGATGT+TGG | 0.492293 | 3_4:-12407562 | Msa0490750:CDS |
| TTCTCCGTGTCCTGTGTTGG+TGG | 0.492718 | 3_4:+12406688 | None:intergenic |
| GGGAAGAAATGGTTGGGTCA+TGG | 0.493138 | 3_4:-12407351 | Msa0490750:CDS |
| GAAGATAACGCCAAAGATAA+CGG | 0.493425 | 3_4:-12408359 | Msa0490750:CDS |
| ACTTGCCGTTGTTGTTGAGT+TGG | 0.493567 | 3_4:+12408486 | None:intergenic |
| ATCGAATTTGAATTCGAATG+AGG | 0.495256 | 3_4:-12408228 | Msa0490750:CDS |
| CTGGGATGGAAACCGATCAT+TGG | 0.498087 | 3_4:-12407245 | Msa0490750:CDS |
| CCAATGTGCTGCCTTGTGTA+GGG | 0.499190 | 3_4:-12407524 | Msa0490750:CDS |
| AAGATATGGATGCAGGATGT+TGG | 0.501063 | 3_4:-12407207 | Msa0490750:CDS |
| GTGCTGCCTTGTGTAGGGGC+TGG | 0.502414 | 3_4:-12407519 | Msa0490750:CDS |
| GCTTAAATAAACGGCGACTA+GGG | 0.502810 | 3_4:-12406423 | Msa0490750:CDS |
| GAGTTGTTCAGGAAGCGTTA+AGG | 0.503875 | 3_4:-12408169 | Msa0490750:CDS |
| ATTTAAGCTTGGATGAATGC+AGG | 0.504713 | 3_4:+12406438 | None:intergenic |
| GTTTGGCCATTGTTGCCTGT+TGG | 0.507056 | 3_4:+12408858 | None:intergenic |
| GTTTACTTTACTTGTGGAGA+AGG | 0.510284 | 3_4:-12408024 | Msa0490750:CDS |
| GGAGTCAATGAATGAAGAAT+CGG | 0.513578 | 3_4:-12406665 | Msa0490750:CDS |
| TCCTTCTCCGTGTCCTGTGT+TGG | 0.513688 | 3_4:+12406685 | None:intergenic |
| GTGCTTGTCATGCATGATAC+AGG | 0.515347 | 3_4:-12406904 | Msa0490750:CDS |
| TGCTGCAACTCTGTTGCGAA+CGG | 0.517987 | 3_4:+12408905 | None:intergenic |
| AGAAGAGGTAAATCTGAGGA+AGG | 0.518272 | 3_4:+12408793 | None:intergenic |
| AGTCTCCAAGCTGGAAAACC+GGG | 0.519192 | 3_4:-12406468 | Msa0490750:CDS |
| GTTGGGTCATGGTTTGAAGA+AGG | 0.519901 | 3_4:-12407340 | Msa0490750:CDS |
| GGAAATGGGAAACCTTACTA+AGG | 0.521861 | 3_4:+12407274 | None:intergenic |
| ACACCTTATCATCCTACATC+AGG | 0.523480 | 3_4:-12405664 | Msa0490750:intron |
| CACGGCGATGGAGAGGGTGT+TGG | 0.525228 | 3_4:-12407759 | Msa0490750:CDS |
| AGAGTATAGACTCTTGGTGC+TGG | 0.526426 | 3_4:+12406511 | None:intergenic |
| AATGAATTGCATTGCAGAGA+CGG | 0.528537 | 3_4:-12406221 | Msa0490750:three_prime_UTR |
| AGCTTAAATAAACGGCGACT+AGG | 0.528737 | 3_4:-12406424 | Msa0490750:CDS |
| TGTGCTCAATGCACTTAGCT+TGG | 0.528832 | 3_4:-12403329 | Msa0490750:three_prime_UTR |
| CAACCGCGCAATGCAGAGCT+CGG | 0.531823 | 3_4:+12407726 | None:intergenic |
| GGAGAGGGGTTGCCGCAAGA+AGG | 0.531888 | 3_4:-12407867 | Msa0490750:CDS |
| GGAGAAGTTGGTTTGTGTGA+TGG | 0.533332 | 3_4:-12407982 | Msa0490750:CDS |
| AGAATAGGGAAGAAATGGTT+GGG | 0.534694 | 3_4:-12407357 | Msa0490750:CDS |
| CTTGTGGAGAAGGAATTTGA+TGG | 0.535812 | 3_4:-12408014 | Msa0490750:CDS |
| ACATGAAGAGTATAGACTCT+TGG | 0.536973 | 3_4:+12406505 | None:intergenic |
| GGAAGCGTTTGAGTTGCATA+CGG | 0.540878 | 3_4:+12408540 | None:intergenic |
| ATCGCCAACATCCAACATCA+AGG | 0.541618 | 3_4:+12407551 | None:intergenic |
| ATGGCAAAATGTCTTAATGA+AGG | 0.541632 | 3_4:-12408311 | Msa0490750:CDS |
| TGTGATGGAGGATAAGATTG+AGG | 0.542574 | 3_4:-12407967 | Msa0490750:CDS |
| AGTCTGTTGACTTTGGTGCA+TGG | 0.546418 | 3_4:-12406351 | Msa0490750:CDS |
| ATCACCTTCATAAAATCTGC+CGG | 0.546759 | 3_4:+12406178 | None:intergenic |
| ATGAATGCAGGTCGAAAACC+CGG | 0.547613 | 3_4:+12406450 | None:intergenic |
| CACCTTGATGCCATTGTAGG+AGG | 0.550829 | 3_4:+12403306 | None:intergenic |
| TTCTTATTTCATCGATGACA+TGG | 0.550913 | 3_4:-12408330 | Msa0490750:CDS |
| GGGACTGCATGATATGGAAA+AGG | 0.551984 | 3_4:-12403278 | Msa0490750:three_prime_UTR |
| CTGAAGATTTCAAATTACGA+TGG | 0.552245 | 3_4:-12405747 | Msa0490750:three_prime_UTR |
| TAGAATAGGGAAGAAATGGT+TGG | 0.555859 | 3_4:-12407358 | Msa0490750:CDS |
| TTTGTTGAAGATATGGATGC+AGG | 0.556126 | 3_4:-12407214 | Msa0490750:CDS |
| GAAGCGTTTGAGTTGCATAC+GGG | 0.557044 | 3_4:+12408541 | None:intergenic |
| GTGTGGTGAGTCCTGATTGG+TGG | 0.557349 | 3_4:-12408046 | Msa0490750:CDS |
| GTTTGCTTTGCAGAAGCTCG+AGG | 0.561989 | 3_4:-12407400 | Msa0490750:CDS |
| GAGAGGGGTTGCCGCAAGAA+GGG | 0.562241 | 3_4:-12407866 | Msa0490750:CDS |
| CTTGATAATTGAATCTGCCT+CGG | 0.564382 | 3_4:+12407062 | None:intergenic |
| ATGAGATATGAAGGTGTGCA+CGG | 0.564981 | 3_4:-12407777 | Msa0490750:CDS |
| GGCCTCCTACAATGGCATCA+AGG | 0.565020 | 3_4:-12403308 | Msa0490750:three_prime_UTR |
| GTGTTTGAGGTTGCAATCTG+AGG | 0.565024 | 3_4:-12403234 | None:intergenic |
| AGGTTGGAGATGAGATATGA+AGG | 0.566822 | 3_4:-12407786 | Msa0490750:CDS |
| AAGGTGTGGTGAGTCCTGAT+TGG | 0.568685 | 3_4:-12408049 | Msa0490750:CDS |
| TGAGCTGAAGCAGAGGCCTA+TGG | 0.570122 | 3_4:-12405697 | Msa0490750:intron |
| TAAGGGCAAGCATGTTACCT+TGG | 0.571372 | 3_4:-12405779 | Msa0490750:intron |
| AAGGAATCGGTTAACTCTTG+CGG | 0.571443 | 3_4:+12407123 | None:intergenic |
| TTGGTGGTTTACTTTACTTG+TGG | 0.573398 | 3_4:-12408030 | Msa0490750:CDS |
| TCATGGTTTGAAGAAGGTAA+AGG | 0.575187 | 3_4:-12407334 | Msa0490750:CDS |
| ATACTCTTCATGTAATGGAA+AGG | 0.575373 | 3_4:-12406495 | Msa0490750:CDS |
| CAAATGCTTATACCAATGAT+CGG | 0.577176 | 3_4:+12407233 | None:intergenic |
| TTTGAAGAAATTTGTAGTGG+TGG | 0.578818 | 3_4:+12408832 | None:intergenic |
| CCTTGTGTAGGGGCTGGTAG+CGG | 0.580350 | 3_4:-12407513 | Msa0490750:CDS |
| AGAAAGAAGAGGTAAATCTG+AGG | 0.580370 | 3_4:+12408789 | None:intergenic |
| CACGGTTGTAGGAGTGGGAG+AGG | 0.581102 | 3_4:-12408101 | Msa0490750:CDS |
| TCTATTCCAACAGGCAACAA+TGG | 0.581853 | 3_4:-12408864 | Msa0490750:CDS |
| TATCACACGGTTGTAGGAGT+GGG | 0.582465 | 3_4:-12408106 | Msa0490750:CDS |
| ATGTATGGAATTACGTATAG+CGG | 0.586059 | 3_4:-12406610 | Msa0490750:CDS |
| AAAGGCAAAAGTCTCCAAGC+TGG | 0.587004 | 3_4:-12406477 | Msa0490750:CDS |
| GGTAAAGTGTGTACCTGGAA+AGG | 0.587351 | 3_4:+12408766 | None:intergenic |
| AATGTGTTGTCTAAGTTCGT+CGG | 0.589860 | 3_4:-12407159 | Msa0490750:CDS |
| GCGTTGAAGTATATATGTAA+AGG | 0.591774 | 3_4:-12408068 | Msa0490750:CDS |
| ATCTTCAGCAAGATCTTCCA+AGG | 0.593241 | 3_4:+12405762 | None:intergenic |
| CAATGGCATCAAGGTGAGCG+AGG | 0.594618 | 3_4:-12403299 | Msa0490750:three_prime_UTR |
| GAATCCTTGATGTTGGATGT+TGG | 0.597262 | 3_4:-12407555 | Msa0490750:CDS |
| ACCAATGTGCTGCCTTGTGT+AGG | 0.601143 | 3_4:-12407525 | Msa0490750:CDS |
| GAAAGCGGTTCATAAGATGA+AGG | 0.605300 | 3_4:-12407436 | Msa0490750:CDS |
| TTTCCCATTTCCGAAAACCT+GGG | 0.608981 | 3_4:-12407263 | Msa0490750:CDS |
| ATATCACACGGTTGTAGGAG+TGG | 0.612755 | 3_4:-12408107 | Msa0490750:CDS |
| TAGCAGGCTTCCACCAACAC+AGG | 0.613207 | 3_4:-12406698 | Msa0490750:CDS |
| GGTGTGCACGGCGATGGAGA+GGG | 0.613547 | 3_4:-12407765 | Msa0490750:CDS |
| TATGGATTGACTACATCAGA+AGG | 0.619122 | 3_4:-12406946 | Msa0490750:CDS |
| CAATGTGCTGCCTTGTGTAG+GGG | 0.619976 | 3_4:-12407523 | Msa0490750:CDS |
| ACCAACACAGGACACGGAGA+AGG | 0.620948 | 3_4:-12406686 | Msa0490750:CDS |
| AAGATGCTCACACCTGATGT+AGG | 0.621423 | 3_4:+12405652 | None:intergenic |
| GAAGTTGGTTTGTGTGATGG+AGG | 0.621686 | 3_4:-12407979 | Msa0490750:CDS |
| GCTTCCACCAACACAGGACA+CGG | 0.622519 | 3_4:-12406692 | Msa0490750:CDS |
| ATTTGTTTGAGCTGAAGCAG+AGG | 0.624604 | 3_4:-12405704 | Msa0490750:intron |
| AAGCCGAGCTCTGCATTGCG+CGG | 0.628824 | 3_4:-12407729 | Msa0490750:CDS |
| AATGGCATCAAGGTGAGCGA+GGG | 0.630258 | 3_4:-12403298 | Msa0490750:three_prime_UTR |
| TAGGAGTGGGAGAGGACGTG+TGG | 0.630882 | 3_4:-12408093 | Msa0490750:CDS |
| ACTGCTGTAGACATTACAGC+AGG | 0.631506 | 3_4:-12408935 | Msa0490750:CDS |
| TCTCATACCATTTCAGCCAG+CGG | 0.634159 | 3_4:+12406848 | None:intergenic |
| CCTATTACAAAACAATTACA+CGG | 0.640886 | 3_4:+12406544 | None:intergenic |
| GAGTGGGAGAGGACGTGTGG+CGG | 0.643410 | 3_4:-12408090 | Msa0490750:CDS |
| TGATTTGAAGAAATTTGTAG+TGG | 0.644967 | 3_4:+12408829 | None:intergenic |
| GGCGACAAAATCCCTTCTTG+CGG | 0.645137 | 3_4:+12407855 | None:intergenic |
| CCGCTACCAGCCCCTACACA+AGG | 0.645346 | 3_4:+12407513 | None:intergenic |
| TGTAGACATTACAGCAGGAG+AGG | 0.645370 | 3_4:-12408930 | Msa0490750:CDS |
| AGAGAGTCATGCTGTGAAAG+CGG | 0.646245 | 3_4:-12407451 | Msa0490750:CDS |
| AGGTGTGCACGGCGATGGAG+AGG | 0.646989 | 3_4:-12407766 | Msa0490750:CDS |
| CCCTACACAAGGCAGCACAT+TGG | 0.659794 | 3_4:+12407524 | None:intergenic |
| ACCTGGAAAGGAGAAAGAAG+AGG | 0.671314 | 3_4:+12408778 | None:intergenic |
| GATGTTGTAAGCGTCTGTGA+GGG | 0.673150 | 3_4:+12408424 | None:intergenic |
| TGATGTTGTAAGCGTCTGTG+AGG | 0.674268 | 3_4:+12408423 | None:intergenic |
| ACATCATTCTCAACACACGC+TGG | 0.677211 | 3_4:-12408633 | Msa0490750:CDS |
| GGTTTGGGGATTTGAAACGA+CGG | 0.677736 | 3_4:+12408445 | None:intergenic |
| GAAGTATATATGTAAAGGTG+TGG | 0.680404 | 3_4:-12408063 | Msa0490750:CDS |
| GAATGAGGAAATGTTGACGT+TGG | 0.693032 | 3_4:-12408213 | Msa0490750:CDS |
| AAATCCCAACTCAACAACAA+CGG | 0.696369 | 3_4:-12408491 | Msa0490750:CDS |
| CTACATCAGAAGGATTTGCG+AGG | 0.697134 | 3_4:-12406936 | Msa0490750:CDS |
| ACGAAATGGAGATAGAAAAG+CGG | 0.704614 | 3_4:-12406735 | Msa0490750:CDS |
| AGAAAAGTATATATCTACCG+AGG | 0.710259 | 3_4:-12407079 | Msa0490750:CDS |
| ATAACCGTTTCCCCAAAATG+CGG | 0.715660 | 3_4:-12408383 | Msa0490750:CDS |
| CGAGGCTTGGAATTACGGGA+CGG | 0.722205 | 3_4:-12407382 | Msa0490750:CDS |
| AATTTCTCGAGGATATCACA+CGG | 0.755573 | 3_4:-12408119 | Msa0490750:CDS |
| ATACATATTCGATCTCAACG+AGG | 0.801717 | 3_4:-12408268 | Msa0490750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAATATTCATCAAAAT+CGG | + | chr3_4:12404350-12404369 | None:intergenic | 15.0% |
| !!! | TTTTGTTGAATAATTTGTAT+TGG | - | chr3_4:12406057-12406076 | Msa0490750:intron | 15.0% |
| !! | GATTAGGTTATAATTAAATT+GGG | + | chr3_4:12406374-12406393 | None:intergenic | 15.0% |
| !! | AGATTAGGTTATAATTAAAT+TGG | + | chr3_4:12406375-12406394 | None:intergenic | 15.0% |
| !! | TTTAAATGACTATCTATTAT+TGG | + | chr3_4:12406973-12406992 | None:intergenic | 15.0% |
| !! | ATTACATAGTAATAAAGAAA+GGG | + | chr3_4:12407207-12407226 | None:intergenic | 15.0% |
| !! | TATTACATAGTAATAAAGAA+AGG | + | chr3_4:12407208-12407227 | None:intergenic | 15.0% |
| !!! | ATTATCATCTTCTTTTTTTC+AGG | - | chr3_4:12403522-12403541 | Msa0490750:intron | 20.0% |
| !! | ATAAGATGATTCTCTTAAAA+AGG | + | chr3_4:12406915-12406934 | None:intergenic | 20.0% |
| !! | TTGAATTTATGTAATAGCTT+AGG | + | chr3_4:12407008-12407027 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTTATTCTTACA+AGG | + | chr3_4:12407405-12407424 | None:intergenic | 20.0% |
| !! | TGTAAGAATAAGAAAAACAA+AGG | - | chr3_4:12407405-12407424 | Msa0490750:CDS | 20.0% |
| !! | TTCTCAATTAAACAATGTAT+GGG | - | chr3_4:12408019-12408038 | Msa0490750:CDS | 20.0% |
| !!! | ATACACAATACAATCATTTT+AGG | + | chr3_4:12408366-12408385 | None:intergenic | 20.0% |
| !! | TGTATCACATATCATTAAAT+TGG | - | chr3_4:12408542-12408561 | Msa0490750:CDS | 20.0% |
| ! | TGATTTGAAGAAATTTGTAG+TGG | + | chr3_4:12403355-12403374 | None:intergenic | 25.0% |
| ! | TTAGTGTTGTGATTTATAAG+GGG | + | chr3_4:12403461-12403480 | None:intergenic | 25.0% |
| ! | GTTAGTGTTGTGATTTATAA+GGG | + | chr3_4:12403462-12403481 | None:intergenic | 25.0% |
| ! | TGTTAGTGTTGTGATTTATA+AGG | + | chr3_4:12403463-12403482 | None:intergenic | 25.0% |
| !!! | ATAATTGAGTGTTTTTGTTG+TGG | + | chr3_4:12403507-12403526 | None:intergenic | 25.0% |
| !!! | GGATGATTTTTTGTTTGATT+TGG | - | chr3_4:12404235-12404254 | Msa0490750:intron | 25.0% |
| ! | AATACAGTAAACTTTAACAC+TGG | + | chr3_4:12404519-12404538 | None:intergenic | 25.0% |
| ! | GTGTTAAAGTTTACTGTATT+AGG | - | chr3_4:12404519-12404538 | Msa0490750:intron | 25.0% |
| ! | AGTTTACTGTATTAGGTTTA+TGG | - | chr3_4:12404526-12404545 | Msa0490750:intron | 25.0% |
| !!! | TATGGATGAGATTTTTTTTG+CGG | - | chr3_4:12404544-12404563 | Msa0490750:intron | 25.0% |
| !! | ATAAGCATTTGTTGAAGATA+TGG | - | chr3_4:12404960-12404979 | Msa0490750:intron | 25.0% |
| ! | CATAAACTCATAAAAGGAAT+CGG | + | chr3_4:12405074-12405093 | None:intergenic | 25.0% |
| ! | CTGTTTCATAAACTCATAAA+AGG | + | chr3_4:12405080-12405099 | None:intergenic | 25.0% |
| ! | TCTGTTGAACTGTTATTATT+CGG | + | chr3_4:12405151-12405170 | None:intergenic | 25.0% |
| !!! | CGAAATTATTGATTGGTTTT+CGG | - | chr3_4:12405300-12405319 | Msa0490750:intron | 25.0% |
| !!! | GAAATTATTGATTGGTTTTC+GGG | - | chr3_4:12405301-12405320 | Msa0490750:intron | 25.0% |
| !!! | AAATTATTGATTGGTTTTCG+GGG | - | chr3_4:12405302-12405321 | Msa0490750:intron | 25.0% |
| ! | TGCTAACGTTAATGATATAA+AGG | - | chr3_4:12405360-12405379 | Msa0490750:intron | 25.0% |
| !! | TTTTGATATCCGATCAAATT+AGG | - | chr3_4:12405383-12405402 | Msa0490750:intron | 25.0% |
| ! | CCTATTACAAAACAATTACA+CGG | + | chr3_4:12405640-12405659 | None:intergenic | 25.0% |
| ! | TTCATCCAAGCTTAAATAAA+CGG | - | chr3_4:12405749-12405768 | Msa0490750:three_prime_UTR | 25.0% |
| ! | TTGTGATCATAAACTTTATC+AGG | - | chr3_4:12405871-12405890 | Msa0490750:intron | 25.0% |
| ! | ATAAACTTTATCAGGATGTT+TGG | - | chr3_4:12405879-12405898 | Msa0490750:intron | 25.0% |
| ! | ACTTAAAAACTCATAGTTGA+AGG | + | chr3_4:12406038-12406057 | None:intergenic | 25.0% |
| !!! | ATAGTTGTTTTCATTCTTTG+AGG | + | chr3_4:12406310-12406329 | None:intergenic | 25.0% |
| !! | TCTTTTCACCATTTTACTAT+AGG | - | chr3_4:12406548-12406567 | Msa0490750:CDS | 25.0% |
| ! | CAGTAAAACCTATAGTAAAA+TGG | + | chr3_4:12406559-12406578 | None:intergenic | 25.0% |
| !! | TTTTACTATAGGTTTTACTG+TGG | - | chr3_4:12406559-12406578 | Msa0490750:CDS | 25.0% |
| ! | ACATTTGAACAGATAATTGA+GGG | + | chr3_4:12406601-12406620 | None:intergenic | 25.0% |
| ! | TACATTTGAACAGATAATTG+AGG | + | chr3_4:12406602-12406621 | None:intergenic | 25.0% |
| ! | GTATTCTTAAATATCCTTCA+TGG | + | chr3_4:12406691-12406710 | None:intergenic | 25.0% |
| ! | CAAATTCCTAATAAGTTTGA+AGG | - | chr3_4:12406853-12406872 | Msa0490750:CDS | 25.0% |
| ! | TAACTACCTTCAAACTTATT+AGG | + | chr3_4:12406862-12406881 | None:intergenic | 25.0% |
| ! | GAATCATCTTATAGTTATTC+AGG | - | chr3_4:12406923-12406942 | Msa0490750:CDS | 25.0% |
| ! | GAGCTAACAATTATTTATGT+TGG | + | chr3_4:12407106-12407125 | None:intergenic | 25.0% |
| ! | TAATTGGAAAGATAATAGAG+TGG | + | chr3_4:12407171-12407190 | None:intergenic | 25.0% |
| ! | TATGGCAAATGAAGAAATTT+GGG | + | chr3_4:12407367-12407386 | None:intergenic | 25.0% |
| ! | ATATGGCAAATGAAGAAATT+TGG | + | chr3_4:12407368-12407387 | None:intergenic | 25.0% |
| ! | CATTTGCCATATAATAAGAT+AGG | - | chr3_4:12407376-12407395 | Msa0490750:CDS | 25.0% |
| ! | AGGTAACCTATCTTATTATA+TGG | + | chr3_4:12407385-12407404 | None:intergenic | 25.0% |
| !! | TTATTGTTTCACTTGATTTG+GGG | + | chr3_4:12407517-12407536 | None:intergenic | 25.0% |
| ! | GTTATTGTTTCACTTGATTT+GGG | + | chr3_4:12407518-12407537 | None:intergenic | 25.0% |
| ! | TGTTATTGTTTCACTTGATT+TGG | + | chr3_4:12407519-12407538 | None:intergenic | 25.0% |
| !! | TTTGGGTATTTTCGTAATTT+TGG | + | chr3_4:12407827-12407846 | None:intergenic | 25.0% |
| ! | GAACAACATCTCAAAAATTT+GGG | + | chr3_4:12407844-12407863 | None:intergenic | 25.0% |
| ! | AGAACAACATCTCAAAAATT+TGG | + | chr3_4:12407845-12407864 | None:intergenic | 25.0% |
| !!! | AAATTTTTGAGATGTTGTTC+TGG | - | chr3_4:12407844-12407863 | Msa0490750:CDS | 25.0% |
| ! | GATGATTACTATCATTTGAA+CGG | + | chr3_4:12407977-12407996 | None:intergenic | 25.0% |
| ! | GTTCTCAATTAAACAATGTA+TGG | - | chr3_4:12408018-12408037 | Msa0490750:CDS | 25.0% |
| ! | TCTCAATTAAACAATGTATG+GGG | - | chr3_4:12408020-12408039 | Msa0490750:CDS | 25.0% |
| ! | GATATGTGATACAGATTAAA+TGG | + | chr3_4:12408535-12408554 | None:intergenic | 25.0% |
| !! | AATATACATTTTGCATGAAG+TGG | - | chr3_4:12408617-12408636 | Msa0490750:CDS | 25.0% |
| ! | CAAACATCAAATGAAAGTAA+AGG | + | chr3_4:12408685-12408704 | None:intergenic | 25.0% |
| ! | ACAAGGAAATTGAATAGTAA+AGG | + | chr3_4:12408804-12408823 | None:intergenic | 25.0% |
| !!! | AATTTCCTTGTTATTGTAGT+AGG | - | chr3_4:12408813-12408832 | Msa0490750:CDS | 25.0% |
| TTTGAAGAAATTTGTAGTGG+TGG | + | chr3_4:12403352-12403371 | None:intergenic | 30.0% | |
| TGTGATTTATAAGGGGAAAT+TGG | + | chr3_4:12403454-12403473 | None:intergenic | 30.0% | |
| !!! | ATTTGACCCGTTTTTTGATT+CGG | + | chr3_4:12403674-12403693 | None:intergenic | 30.0% |
| ! | TTCTTATTTCATCGATGACA+TGG | - | chr3_4:12403851-12403870 | Msa0490750:intron | 30.0% |
| ATGGCAAAATGTCTTAATGA+AGG | - | chr3_4:12403870-12403889 | Msa0490750:intron | 30.0% | |
| ATCGAATTTGAATTCGAATG+AGG | - | chr3_4:12403953-12403972 | Msa0490750:intron | 30.0% | |
| GCGTTGAAGTATATATGTAA+AGG | - | chr3_4:12404113-12404132 | Msa0490750:intron | 30.0% | |
| GAAGTATATATGTAAAGGTG+TGG | - | chr3_4:12404118-12404137 | Msa0490750:intron | 30.0% | |
| ! | TTAGAAGTATGTTTGATGCT+AGG | - | chr3_4:12404258-12404277 | Msa0490750:intron | 30.0% |
| ! | TAGAAGTATGTTTGATGCTA+GGG | - | chr3_4:12404259-12404278 | Msa0490750:intron | 30.0% |
| !! | TGTTTGATAGTGAGTTTCAT+AGG | - | chr3_4:12404375-12404394 | Msa0490750:intron | 30.0% |
| TTTGAAAGAATCCTTGATGT+TGG | - | chr3_4:12404619-12404638 | Msa0490750:intron | 30.0% | |
| CAAATGCTTATACCAATGAT+CGG | + | chr3_4:12404951-12404970 | None:intergenic | 30.0% | |
| ! | CAACACATTTTCTTCACTTT+TGG | + | chr3_4:12405011-12405030 | None:intergenic | 30.0% |
| ! | AGAAAAGTATATATCTACCG+AGG | - | chr3_4:12405102-12405121 | Msa0490750:intron | 30.0% |
| TAATAACAGTTCAACAGAAC+AGG | - | chr3_4:12405153-12405172 | Msa0490750:intron | 30.0% | |
| ATACAGGCGAAATTATTGAT+TGG | - | chr3_4:12405293-12405312 | Msa0490750:intron | 30.0% | |
| GCATGATTTCCTAATTTGAT+CGG | + | chr3_4:12405395-12405414 | None:intergenic | 30.0% | |
| GTACTTTAGCAACAAAGTAT+AGG | - | chr3_4:12405419-12405438 | Msa0490750:intron | 30.0% | |
| AAAGTATAGGATACACGAAA+TGG | - | chr3_4:12405432-12405451 | Msa0490750:intron | 30.0% | |
| ATGTATGGAATTACGTATAG+CGG | - | chr3_4:12405571-12405590 | Msa0490750:intron | 30.0% | |
| !! | CCGTGTAATTGTTTTGTAAT+AGG | - | chr3_4:12405637-12405656 | Msa0490750:intron | 30.0% |
| AGTCTATACTCTTCATGTAA+TGG | - | chr3_4:12405681-12405700 | Msa0490750:three_prime_UTR | 30.0% | |
| ! | ATACTCTTCATGTAATGGAA+AGG | - | chr3_4:12405686-12405705 | Msa0490750:three_prime_UTR | 30.0% |
| CATTTGAAGGATTTGTATCT+TGG | - | chr3_4:12405793-12405812 | Msa0490750:intron | 30.0% | |
| AACCTTCATCTTCAATGAAA+TGG | + | chr3_4:12405932-12405951 | None:intergenic | 30.0% | |
| ATTGAAGATGAAGGTTCTAT+TGG | - | chr3_4:12405936-12405955 | Msa0490750:intron | 30.0% | |
| ATTCAATACTTACTACTTGC+CGG | - | chr3_4:12405984-12406003 | Msa0490750:intron | 30.0% | |
| TTTATGAAGGTGATTCTTCT+TGG | - | chr3_4:12406012-12406031 | Msa0490750:intron | 30.0% | |
| TAACCTAATCTTCTTTCGTA+AGG | - | chr3_4:12406384-12406403 | Msa0490750:CDS | 30.0% | |
| AACCTAATCTTCTTTCGTAA+GGG | - | chr3_4:12406385-12406404 | Msa0490750:CDS | 30.0% | |
| CTGAAGATTTCAAATTACGA+TGG | - | chr3_4:12406434-12406453 | Msa0490750:CDS | 30.0% | |
| ! | AGGTGTTAATTTTACACCAT+AGG | + | chr3_4:12406503-12406522 | None:intergenic | 30.0% |
| CATTTGAACAGATAATTGAG+GGG | + | chr3_4:12406600-12406619 | None:intergenic | 30.0% | |
| ACATTTACAAGTTTCCATGA+AGG | - | chr3_4:12406674-12406693 | Msa0490750:CDS | 30.0% | |
| AAATTCAAACAAGTTAGCCA+TGG | - | chr3_4:12407020-12407039 | Msa0490750:CDS | 30.0% | |
| CAATTATTTATGTTGGCACT+TGG | + | chr3_4:12407099-12407118 | None:intergenic | 30.0% | |
| ! | GGGAAGCAATTTTGTATAAT+TGG | + | chr3_4:12407187-12407206 | None:intergenic | 30.0% |
| ATGGCAAATGAAGAAATTTG+GGG | + | chr3_4:12407366-12407385 | None:intergenic | 30.0% | |
| ACACCAACATTTGGTTATAT+AGG | - | chr3_4:12407440-12407459 | Msa0490750:CDS | 30.0% | |
| !!! | TATGATGGTGTGTTTTTTAG+TGG | + | chr3_4:12407620-12407639 | None:intergenic | 30.0% |
| CAAATTGATCACGAATGTAA+CGG | - | chr3_4:12407748-12407767 | Msa0490750:CDS | 30.0% | |
| AAATTGATCACGAATGTAAC+GGG | - | chr3_4:12407749-12407768 | Msa0490750:CDS | 30.0% | |
| TACCACATACACTTAAAAAG+TGG | + | chr3_4:12407781-12407800 | None:intergenic | 30.0% | |
| !! | TAATTTTGGTGATTCACGTT+TGG | + | chr3_4:12407813-12407832 | None:intergenic | 30.0% |
| GATAGTAATCATCCACATAA+AGG | - | chr3_4:12407984-12408003 | Msa0490750:CDS | 30.0% | |
| AAGAAATTTCACATCGAGAA+AGG | - | chr3_4:12408237-12408256 | Msa0490750:CDS | 30.0% | |
| !! | CAATATGAACAGATTTGTTG+TGG | - | chr3_4:12408334-12408353 | Msa0490750:CDS | 30.0% |
| ATTTATCGTGCAAATATGTC+TGG | - | chr3_4:12408386-12408405 | Msa0490750:CDS | 30.0% | |
| TTTATCGTGCAAATATGTCT+GGG | - | chr3_4:12408387-12408406 | Msa0490750:CDS | 30.0% | |
| ! | TTTTGGCGGGAAATTTTATA+TGG | + | chr3_4:12408442-12408461 | None:intergenic | 30.0% |
| GCTATCATTGTATTAGTTGT+AGG | - | chr3_4:12408577-12408596 | Msa0490750:CDS | 30.0% | |
| TGAAAGTAAAGGAACATAGT+AGG | + | chr3_4:12408674-12408693 | None:intergenic | 30.0% | |
| TAACACCTACTACAATAACA+AGG | + | chr3_4:12408821-12408840 | None:intergenic | 30.0% | |
| AACACAGAATCTATTCCAAC+AGG | - | chr3_4:12403308-12403327 | Msa0490750:three_prime_UTR | 35.0% | |
| AGAAAGAAGAGGTAAATCTG+AGG | + | chr3_4:12403395-12403414 | None:intergenic | 35.0% | |
| GAAATTGGAAGAGAAATGTG+AGG | + | chr3_4:12403439-12403458 | None:intergenic | 35.0% | |
| AAATCCCAACTCAACAACAA+CGG | - | chr3_4:12403690-12403709 | Msa0490750:intron | 35.0% | |
| !! | TTTTGGGGAAACGGTTATAT+TGG | + | chr3_4:12403796-12403815 | None:intergenic | 35.0% |
| GAAGATAACGCCAAAGATAA+CGG | - | chr3_4:12403822-12403841 | Msa0490750:intron | 35.0% | |
| ATACATATTCGATCTCAACG+AGG | - | chr3_4:12403913-12403932 | Msa0490750:intron | 35.0% | |
| ACAACTCTCAGCTTCAAATT+AGG | + | chr3_4:12403999-12404018 | None:intergenic | 35.0% | |
| TGTGATATCCTCGAGAAATT+CGG | + | chr3_4:12404062-12404081 | None:intergenic | 35.0% | |
| AATTTCTCGAGGATATCACA+CGG | - | chr3_4:12404062-12404081 | Msa0490750:intron | 35.0% | |
| AGTAAAGTAAACCACCAATC+AGG | + | chr3_4:12404149-12404168 | None:intergenic | 35.0% | |
| ! | TTGGTGGTTTACTTTACTTG+TGG | - | chr3_4:12404151-12404170 | Msa0490750:intron | 35.0% |
| GTTTACTTTACTTGTGGAGA+AGG | - | chr3_4:12404157-12404176 | Msa0490750:intron | 35.0% | |
| !!! | AGGGTTTTGAATCTTGAGTT+TGG | - | chr3_4:12404278-12404297 | Msa0490750:intron | 35.0% |
| !! | GTTTTGAATCTTGAGTTTGG+TGG | - | chr3_4:12404281-12404300 | Msa0490750:intron | 35.0% |
| !! | GAGTTTGGTGGTTTTTGTAA+AGG | - | chr3_4:12404293-12404312 | Msa0490750:intron | 35.0% |
| ! | TGATAGTGAGTTTCATAGGT+TGG | - | chr3_4:12404379-12404398 | Msa0490750:intron | 35.0% |
| !!! | GAGATTTTTTTTGCGGTTTC+TGG | - | chr3_4:12404551-12404570 | Msa0490750:intron | 35.0% |
| TAGAATAGGGAAGAAATGGT+TGG | - | chr3_4:12404823-12404842 | Msa0490750:intron | 35.0% | |
| AGAATAGGGAAGAAATGGTT+GGG | - | chr3_4:12404824-12404843 | Msa0490750:intron | 35.0% | |
| TCATGGTTTGAAGAAGGTAA+AGG | - | chr3_4:12404847-12404866 | Msa0490750:intron | 35.0% | |
| TTTGTTGAAGATATGGATGC+AGG | - | chr3_4:12404967-12404986 | Msa0490750:intron | 35.0% | |
| AATGTGTTGTCTAAGTTCGT+CGG | - | chr3_4:12405022-12405041 | Msa0490750:intron | 35.0% | |
| ! | CTTGATAATTGAATCTGCCT+CGG | + | chr3_4:12405122-12405141 | None:intergenic | 35.0% |
| ATAGACAGGAGCAATGATTT+CGG | + | chr3_4:12405191-12405210 | None:intergenic | 35.0% | |
| !!! | CGCTTTTTTATTGCATAGAC+AGG | + | chr3_4:12405205-12405224 | None:intergenic | 35.0% |
| ! | TATGGATTGACTACATCAGA+AGG | - | chr3_4:12405235-12405254 | Msa0490750:intron | 35.0% |
| ACGAAATGGAGATAGAAAAG+CGG | - | chr3_4:12405446-12405465 | Msa0490750:intron | 35.0% | |
| GGAGTCAATGAATGAAGAAT+CGG | - | chr3_4:12405516-12405535 | Msa0490750:intron | 35.0% | |
| ! | TCAAGTTTTTGACAACGATG+AGG | - | chr3_4:12405543-12405562 | Msa0490750:intron | 35.0% |
| ! | ACATGAAGAGTATAGACTCT+TGG | + | chr3_4:12405679-12405698 | None:intergenic | 35.0% |
| ATTTAAGCTTGGATGAATGC+AGG | + | chr3_4:12405746-12405765 | None:intergenic | 35.0% | |
| GTTGTGTAAGCAACATTTGA+AGG | - | chr3_4:12405780-12405799 | Msa0490750:intron | 35.0% | |
| CTCCATTTCATTGAAGATGA+AGG | - | chr3_4:12405927-12405946 | Msa0490750:intron | 35.0% | |
| AATGAATTGCATTGCAGAGA+CGG | - | chr3_4:12405960-12405979 | Msa0490750:intron | 35.0% | |
| ATCACCTTCATAAAATCTGC+CGG | + | chr3_4:12406006-12406025 | None:intergenic | 35.0% | |
| TCTATTATATCCGTCTCTGA+TGG | - | chr3_4:12406158-12406177 | Msa0490750:intron | 35.0% | |
| CTATTATATCCGTCTCTGAT+GGG | - | chr3_4:12406159-12406178 | Msa0490750:intron | 35.0% | |
| !! | GTGCATTGTTATTTGTTGCT+TGG | - | chr3_4:12406222-12406241 | Msa0490750:three_prime_UTR | 35.0% |
| CACGATCAGTTACGATATAA+AGG | + | chr3_4:12406264-12406283 | None:intergenic | 35.0% | |
| TTTGTTTACCACAAGACTAG+AGG | - | chr3_4:12406884-12406903 | Msa0490750:CDS | 35.0% | |
| AAACAAGTTAGCCATGGAAT+AGG | - | chr3_4:12407026-12407045 | Msa0490750:CDS | 35.0% | |
| GAAAGTAAGTTCCTATTCCA+TGG | + | chr3_4:12407040-12407059 | None:intergenic | 35.0% | |
| TAAACATTCGACATTACCCT+TGG | - | chr3_4:12407073-12407092 | Msa0490750:CDS | 35.0% | |
| AACCAAATGTTGGTGTGTTA+GGG | + | chr3_4:12407436-12407455 | None:intergenic | 35.0% | |
| TAACCAAATGTTGGTGTGTT+AGG | + | chr3_4:12407437-12407456 | None:intergenic | 35.0% | |
| CCACCTATATAACCAAATGT+TGG | + | chr3_4:12407446-12407465 | None:intergenic | 35.0% | |
| CCAACATTTGGTTATATAGG+TGG | - | chr3_4:12407443-12407462 | Msa0490750:CDS | 35.0% | |
| CTGAGACATACAATCACTAT+TGG | + | chr3_4:12407493-12407512 | None:intergenic | 35.0% | |
| !! | TTTTTAGTGGCACTCTTAAC+TGG | + | chr3_4:12407607-12407626 | None:intergenic | 35.0% |
| ! | TCAGTTTCGGTGATAATGTT+TGG | + | chr3_4:12407709-12407728 | None:intergenic | 35.0% |
| AAGGTGAAAGTTCTCAGTTT+CGG | + | chr3_4:12407722-12407741 | None:intergenic | 35.0% | |
| CACATACACTTAAAAAGTGG+TGG | + | chr3_4:12407778-12407797 | None:intergenic | 35.0% | |
| !!! | CACCACTTTTTAAGTGTATG+TGG | - | chr3_4:12407776-12407795 | Msa0490750:CDS | 35.0% |
| !!! | TTTTTGAGATGTTGTTCTGG+TGG | - | chr3_4:12407847-12407866 | Msa0490750:CDS | 35.0% |
| !! | AATGGATTGATATGTTTGGC+TGG | + | chr3_4:12407923-12407942 | None:intergenic | 35.0% |
| !! | CTGCAATGGATTGATATGTT+TGG | + | chr3_4:12407927-12407946 | None:intergenic | 35.0% |
| CAAACATATCAATCCATTGC+AGG | - | chr3_4:12407925-12407944 | Msa0490750:CDS | 35.0% | |
| AAAGGATACTCTCGTATAGT+TGG | + | chr3_4:12407953-12407972 | None:intergenic | 35.0% | |
| TACTATCATTTGAACGGCAA+AGG | + | chr3_4:12407971-12407990 | None:intergenic | 35.0% | |
| ATTAAACAATGTATGGGGCA+TGG | - | chr3_4:12408025-12408044 | Msa0490750:CDS | 35.0% | |
| ! | ATAATTCCTGGAGTAGCTTT+TGG | + | chr3_4:12408459-12408478 | None:intergenic | 35.0% |
| TGAGATTGCAACATAATTCC+TGG | + | chr3_4:12408471-12408490 | None:intergenic | 35.0% | |
| ! | AATGGTATTGAGTGTAAGCA+AGG | + | chr3_4:12408517-12408536 | None:intergenic | 35.0% |
| GGAAACTTGGAATATGTGAT+GGG | + | chr3_4:12408653-12408672 | None:intergenic | 35.0% | |
| AGGAAACTTGGAATATGTGA+TGG | + | chr3_4:12408654-12408673 | None:intergenic | 35.0% | |
| AAGGAACATAGTAGGAAACT+TGG | + | chr3_4:12408666-12408685 | None:intergenic | 35.0% | |
| GAAAAACGCTCAAAGTTTGA+CGG | - | chr3_4:12408925-12408944 | Msa0490750:CDS | 35.0% | |
| TCTATTCCAACAGGCAACAA+TGG | - | chr3_4:12403317-12403336 | Msa0490750:three_prime_UTR | 40.0% | |
| ! | ATTTGTAGTGGTGGTGAGTT+TGG | + | chr3_4:12403343-12403362 | None:intergenic | 40.0% |
| AGAAGAGGTAAATCTGAGGA+AGG | + | chr3_4:12403391-12403410 | None:intergenic | 40.0% | |
| !! | TTTGAGTTGCATACGGGTTT+CGG | + | chr3_4:12403637-12403656 | None:intergenic | 40.0% |
| TGGAGCTCCGAATCAAAAAA+CGG | - | chr3_4:12403664-12403683 | Msa0490750:intron | 40.0% | |
| ! | CGACGGTTTGGATTAAGTTA+TGG | + | chr3_4:12403722-12403741 | None:intergenic | 40.0% |
| ATAACCGTTTCCCCAAAATG+CGG | - | chr3_4:12403798-12403817 | Msa0490750:intron | 40.0% | |
| AGAACTGTCACCGTTATCTT+TGG | + | chr3_4:12403835-12403854 | None:intergenic | 40.0% | |
| GAATGAGGAAATGTTGACGT+TGG | - | chr3_4:12403968-12403987 | Msa0490750:intron | 40.0% | |
| ! | TTTGAAGCTGAGAGTTGTTC+AGG | - | chr3_4:12404001-12404020 | Msa0490750:intron | 40.0% |
| !! | TTTTCAAGCCGAATTTCTCG+AGG | - | chr3_4:12404051-12404070 | Msa0490750:intron | 40.0% |
| CTTGTGGAGAAGGAATTTGA+TGG | - | chr3_4:12404167-12404186 | Msa0490750:intron | 40.0% | |
| !! | GGAATTTGATGGTGCATTGA+TGG | - | chr3_4:12404178-12404197 | Msa0490750:intron | 40.0% |
| ! | TGTGATGGAGGATAAGATTG+AGG | - | chr3_4:12404214-12404233 | Msa0490750:intron | 40.0% |
| ! | TGGTGGTTTTTGTAAAGGAG+AGG | - | chr3_4:12404298-12404317 | Msa0490750:intron | 40.0% |
| ! | GGTGGTTTTTGTAAAGGAGA+GGG | - | chr3_4:12404299-12404318 | Msa0490750:intron | 40.0% |
| ! | GTGGTTTTTGTAAAGGAGAG+GGG | - | chr3_4:12404300-12404319 | Msa0490750:intron | 40.0% |
| AGGTTGGAGATGAGATATGA+AGG | - | chr3_4:12404395-12404414 | Msa0490750:intron | 40.0% | |
| ! | ATGAGATATGAAGGTGTGCA+CGG | - | chr3_4:12404404-12404423 | Msa0490750:intron | 40.0% |
| !!! | TTTTGCGGTTTCTGGTTCTA+AGG | - | chr3_4:12404559-12404578 | Msa0490750:intron | 40.0% |
| GAATCCTTGATGTTGGATGT+TGG | - | chr3_4:12404626-12404645 | Msa0490750:intron | 40.0% | |
| !!! | TATTCGGTTTTTGGGTACGT+TGG | - | chr3_4:12404691-12404710 | Msa0490750:intron | 40.0% |
| !! | TTTTGGGTACGTTGGTAAAG+AGG | - | chr3_4:12404699-12404718 | Msa0490750:intron | 40.0% |
| GAAAGCGGTTCATAAGATGA+AGG | - | chr3_4:12404745-12404764 | Msa0490750:intron | 40.0% | |
| TAGTAGCTCTCTCCTTAGTA+AGG | - | chr3_4:12404895-12404914 | Msa0490750:intron | 40.0% | |
| GGAAATGGGAAACCTTACTA+AGG | + | chr3_4:12404910-12404929 | None:intergenic | 40.0% | |
| TTTCCCATTTCCGAAAACCT+GGG | - | chr3_4:12404918-12404937 | Msa0490750:intron | 40.0% | |
| AAGATATGGATGCAGGATGT+TGG | - | chr3_4:12404974-12404993 | Msa0490750:intron | 40.0% | |
| AAGGAATCGGTTAACTCTTG+CGG | + | chr3_4:12405061-12405080 | None:intergenic | 40.0% | |
| !! | AAAAAGCGTCTCGAGAGATA+TGG | - | chr3_4:12405217-12405236 | Msa0490750:intron | 40.0% |
| GAGATAGAAAAGCGGTTTGA+TGG | - | chr3_4:12405454-12405473 | Msa0490750:intron | 40.0% | |
| ! | AACGATGAGGCGTTAATGTA+TGG | - | chr3_4:12405556-12405575 | Msa0490750:intron | 40.0% |
| !! | CGGTTTGTGTTTGTTGTCTT+TGG | - | chr3_4:12405591-12405610 | Msa0490750:intron | 40.0% |
| ACAATTACACGGTCTTGCTT+CGG | + | chr3_4:12405629-12405648 | None:intergenic | 40.0% | |
| AGTCGCCGTTTATTTAAGCT+TGG | + | chr3_4:12405757-12405776 | None:intergenic | 40.0% | |
| AGCTTAAATAAACGGCGACT+AGG | - | chr3_4:12405757-12405776 | Msa0490750:three_prime_UTR | 40.0% | |
| GCTTAAATAAACGGCGACTA+GGG | - | chr3_4:12405758-12405777 | Msa0490750:three_prime_UTR | 40.0% | |
| !! | TCACTTCAGTCTGTTGACTT+TGG | - | chr3_4:12405823-12405842 | Msa0490750:intron | 40.0% |
| ATGAATTGCATTGCAGAGAC+GGG | - | chr3_4:12405961-12405980 | Msa0490750:intron | 40.0% | |
| ! | TCTTTGAGGACTTCTACAAC+AGG | + | chr3_4:12406296-12406315 | None:intergenic | 40.0% |
| TGCCCTTACGAAAGAAGATT+AGG | + | chr3_4:12406390-12406409 | None:intergenic | 40.0% | |
| ATCTTCAGCAAGATCTTCCA+AGG | + | chr3_4:12406422-12406441 | None:intergenic | 40.0% | |
| ATTTGTTTGAGCTGAAGCAG+AGG | - | chr3_4:12406477-12406496 | Msa0490750:CDS | 40.0% | |
| ACACCTTATCATCCTACATC+AGG | - | chr3_4:12406517-12406536 | Msa0490750:CDS | 40.0% | |
| ACACCTGATGTAGGATGATA+AGG | + | chr3_4:12406523-12406542 | None:intergenic | 40.0% | |
| !! | AGGTATTTCCTCTAGTCTTG+TGG | + | chr3_4:12406895-12406914 | None:intergenic | 40.0% |
| ACCTTCCTCATAAAGAAGCA+AGG | - | chr3_4:12407238-12407257 | Msa0490750:CDS | 40.0% | |
| CCTTCCTCATAAAGAAGCAA+GGG | - | chr3_4:12407239-12407258 | Msa0490750:CDS | 40.0% | |
| CATACCCTTGCTTCTTTATG+AGG | + | chr3_4:12407246-12407265 | None:intergenic | 40.0% | |
| TTCCCTAACACACCAACATT+TGG | - | chr3_4:12407431-12407450 | Msa0490750:CDS | 40.0% | |
| GTACAATGGGTATGATGTGA+AGG | + | chr3_4:12407561-12407580 | None:intergenic | 40.0% | |
| TCACATCATACCCATTGTAC+CGG | - | chr3_4:12407561-12407580 | Msa0490750:CDS | 40.0% | |
| ACAATAACACCCGGTACAAT+GGG | + | chr3_4:12407574-12407593 | None:intergenic | 40.0% | |
| TGGCTATTCACAATAACACC+CGG | + | chr3_4:12407583-12407602 | None:intergenic | 40.0% | |
| TCCAAGTGAAGAGGAATTGT+CGG | - | chr3_4:12407665-12407684 | Msa0490750:CDS | 40.0% | |
| CGTGATCAATTTGACAAGCA+AGG | + | chr3_4:12407741-12407760 | None:intergenic | 40.0% | |
| !! | AAGAGTACTGGCTTCGTTTA+TGG | + | chr3_4:12407880-12407899 | None:intergenic | 40.0% |
| ! | CTATGGCAGTGATGATGAAT+GGG | + | chr3_4:12408071-12408090 | None:intergenic | 40.0% |
| CATTCATCATCACTGCCATA+GGG | - | chr3_4:12408070-12408089 | Msa0490750:CDS | 40.0% | |
| ATTCATCATCACTGCCATAG+GGG | - | chr3_4:12408071-12408090 | Msa0490750:CDS | 40.0% | |
| TGTGTGATTAGTGTGAAGAG+CGG | - | chr3_4:12408121-12408140 | Msa0490750:CDS | 40.0% | |
| TCAGGTGTGTGAGTAAATCT+TGG | + | chr3_4:12408210-12408229 | None:intergenic | 40.0% | |
| ! | TGGCGGGAAATTTTATATGG+TGG | + | chr3_4:12408439-12408458 | None:intergenic | 40.0% |
| GTATTGAGTGTAAGCAAGGA+AGG | + | chr3_4:12408513-12408532 | None:intergenic | 40.0% | |
| TCAAAGTTTGACGGTGTTTG+AGG | - | chr3_4:12408934-12408953 | Msa0490750:CDS | 40.0% | |
| ACTGCTGTAGACATTACAGC+AGG | - | chr3_4:12403246-12403265 | Msa0490750:three_prime_UTR | 45.0% | |
| TGTAGACATTACAGCAGGAG+AGG | - | chr3_4:12403251-12403270 | Msa0490750:three_prime_UTR | 45.0% | |
| ACCTCTTCTTTCTCCTTTCC+AGG | - | chr3_4:12403402-12403421 | Msa0490750:intron | 45.0% | |
| ACCTGGAAAGGAGAAAGAAG+AGG | + | chr3_4:12403406-12403425 | None:intergenic | 45.0% | |
| GGTAAAGTGTGTACCTGGAA+AGG | + | chr3_4:12403418-12403437 | None:intergenic | 45.0% | |
| TGTGAGGTAAAGTGTGTACC+TGG | + | chr3_4:12403423-12403442 | None:intergenic | 45.0% | |
| ACATCATTCTCAACACACGC+TGG | - | chr3_4:12403548-12403567 | Msa0490750:intron | 45.0% | |
| ! | TTGAGTTGCATACGGGTTTC+GGG | + | chr3_4:12403636-12403655 | None:intergenic | 45.0% |
| !! | GAAGCGTTTGAGTTGCATAC+GGG | + | chr3_4:12403643-12403662 | None:intergenic | 45.0% |
| !! | GGAAGCGTTTGAGTTGCATA+CGG | + | chr3_4:12403644-12403663 | None:intergenic | 45.0% |
| TATGCAACTCAAACGCTTCC+TGG | - | chr3_4:12403644-12403663 | Msa0490750:intron | 45.0% | |
| !!! | GTTTTTTGATTCGGAGCTCC+AGG | + | chr3_4:12403665-12403684 | None:intergenic | 45.0% |
| GGAGCTCCGAATCAAAAAAC+GGG | - | chr3_4:12403665-12403684 | Msa0490750:intron | 45.0% | |
| ! | CTTGCCGTTGTTGTTGAGTT+GGG | + | chr3_4:12403697-12403716 | None:intergenic | 45.0% |
| ! | ACTTGCCGTTGTTGTTGAGT+TGG | + | chr3_4:12403698-12403717 | None:intergenic | 45.0% |
| ! | GGTTTGGGGATTTGAAACGA+CGG | + | chr3_4:12403739-12403758 | None:intergenic | 45.0% |
| GATGTTGTAAGCGTCTGTGA+GGG | + | chr3_4:12403760-12403779 | None:intergenic | 45.0% | |
| TGATGTTGTAAGCGTCTGTG+AGG | + | chr3_4:12403761-12403780 | None:intergenic | 45.0% | |
| ! | GTTATCTTCGCCGCATTTTG+GGG | + | chr3_4:12403811-12403830 | None:intergenic | 45.0% |
| ! | CGTTATCTTCGCCGCATTTT+GGG | + | chr3_4:12403812-12403831 | None:intergenic | 45.0% |
| !! | GAGTTGTTCAGGAAGCGTTA+AGG | - | chr3_4:12404012-12404031 | Msa0490750:intron | 45.0% |
| ATATCACACGGTTGTAGGAG+TGG | - | chr3_4:12404074-12404093 | Msa0490750:intron | 45.0% | |
| TATCACACGGTTGTAGGAGT+GGG | - | chr3_4:12404075-12404094 | Msa0490750:intron | 45.0% | |
| ! | TGGTGCATTGATGGAGAAGT+TGG | - | chr3_4:12404187-12404206 | Msa0490750:intron | 45.0% |
| !! | GGAGAAGTTGGTTTGTGTGA+TGG | - | chr3_4:12404199-12404218 | Msa0490750:intron | 45.0% |
| !! | GAAGTTGGTTTGTGTGATGG+AGG | - | chr3_4:12404202-12404221 | Msa0490750:intron | 45.0% |
| ATCGCCAACATCCAACATCA+AGG | + | chr3_4:12404633-12404652 | None:intergenic | 45.0% | |
| !!! | TGGTAGCGGTATTCGGTTTT+TGG | - | chr3_4:12404682-12404701 | Msa0490750:intron | 45.0% |
| !! | GGTAGCGGTATTCGGTTTTT+GGG | - | chr3_4:12404683-12404702 | Msa0490750:intron | 45.0% |
| AGAGAGTCATGCTGTGAAAG+CGG | - | chr3_4:12404730-12404749 | Msa0490750:intron | 45.0% | |
| AAGCTCGAGGCTTGGAATTA+CGG | - | chr3_4:12404794-12404813 | Msa0490750:intron | 45.0% | |
| AATTACGGGACGGCTAGAAT+AGG | - | chr3_4:12404809-12404828 | Msa0490750:intron | 45.0% | |
| ATTACGGGACGGCTAGAATA+GGG | - | chr3_4:12404810-12404829 | Msa0490750:intron | 45.0% | |
| CGGCTAGAATAGGGAAGAAA+TGG | - | chr3_4:12404819-12404838 | Msa0490750:intron | 45.0% | |
| GTTGGGTCATGGTTTGAAGA+AGG | - | chr3_4:12404841-12404860 | Msa0490750:intron | 45.0% | |
| GTTTCCCATTTCCGAAAACC+TGG | - | chr3_4:12404917-12404936 | Msa0490750:intron | 45.0% | |
| ! | CATCCCAGGTTTTCGGAAAT+GGG | + | chr3_4:12404924-12404943 | None:intergenic | 45.0% |
| CTACATCAGAAGGATTTGCG+AGG | - | chr3_4:12405245-12405264 | Msa0490750:intron | 45.0% | |
| GTGCTTGTCATGCATGATAC+AGG | - | chr3_4:12405277-12405296 | Msa0490750:intron | 45.0% | |
| TCTCATACCATTTCAGCCAG+CGG | + | chr3_4:12405336-12405355 | None:intergenic | 45.0% | |
| GGTTTGATGGAGAACTTAGC+AGG | - | chr3_4:12405467-12405486 | Msa0490750:intron | 45.0% | |
| ! | AGAGTATAGACTCTTGGTGC+TGG | + | chr3_4:12405673-12405692 | None:intergenic | 45.0% |
| AAAGGCAAAAGTCTCCAAGC+TGG | - | chr3_4:12405704-12405723 | Msa0490750:intron | 45.0% | |
| AAGTCTCCAAGCTGGAAAAC+CGG | - | chr3_4:12405712-12405731 | Msa0490750:intron | 45.0% | |
| ATGAATGCAGGTCGAAAACC+CGG | + | chr3_4:12405734-12405753 | None:intergenic | 45.0% | |
| !! | AGTCTGTTGACTTTGGTGCA+TGG | - | chr3_4:12405830-12405849 | Msa0490750:intron | 45.0% |
| ! | CTTGCCGGCAGATTTTATGA+AGG | - | chr3_4:12405999-12406018 | Msa0490750:intron | 45.0% |
| TAAGGGCAAGCATGTTACCT+TGG | - | chr3_4:12406402-12406421 | Msa0490750:CDS | 45.0% | |
| AAGATGCTCACACCTGATGT+AGG | + | chr3_4:12406532-12406551 | None:intergenic | 45.0% | |
| TTATGTTGGCACTTGGCCAA+GGG | + | chr3_4:12407092-12407111 | None:intergenic | 45.0% | |
| TTTATGTTGGCACTTGGCCA+AGG | + | chr3_4:12407093-12407112 | None:intergenic | 45.0% | |
| GATAATAGAGTGGTGCGAAC+AGG | + | chr3_4:12407161-12407180 | None:intergenic | 45.0% | |
| CCCTTGCTTCTTTATGAGGA+AGG | + | chr3_4:12407242-12407261 | None:intergenic | 45.0% | |
| ! | AATTTGGGGTCGAAGAGTCT+TGG | + | chr3_4:12407352-12407371 | None:intergenic | 45.0% |
| ! | ACAATCACTATTGGCTGCCT+CGG | + | chr3_4:12407484-12407503 | None:intergenic | 45.0% |
| CACATCATACCCATTGTACC+GGG | - | chr3_4:12407562-12407581 | Msa0490750:CDS | 45.0% | |
| CACAATAACACCCGGTACAA+TGG | + | chr3_4:12407575-12407594 | None:intergenic | 45.0% | |
| TAGTGGCACTCTTAACTGGT+TGG | + | chr3_4:12407603-12407622 | None:intergenic | 45.0% | |
| CTGGGTCATTCTTGGTATGA+TGG | + | chr3_4:12407635-12407654 | None:intergenic | 45.0% | |
| TCCGACAATTCCTCTTCACT+TGG | + | chr3_4:12407669-12407688 | None:intergenic | 45.0% | |
| ! | TCAGTGGGTTTCAAGAGTAC+TGG | + | chr3_4:12407892-12407911 | None:intergenic | 45.0% |
| TGGCTGGTGATTCTTTCAGT+GGG | + | chr3_4:12407907-12407926 | None:intergenic | 45.0% | |
| TTGGCTGGTGATTCTTTCAG+TGG | + | chr3_4:12407908-12407927 | None:intergenic | 45.0% | |
| ! | CGTATAGTTGGTTCCTGCAA+TGG | + | chr3_4:12407941-12407960 | None:intergenic | 45.0% |
| CCTGTTGTTCAGCCTTTATG+TGG | + | chr3_4:12407999-12408018 | None:intergenic | 45.0% | |
| CCACATAAAGGCTGAACAAC+AGG | - | chr3_4:12407996-12408015 | Msa0490750:CDS | 45.0% | |
| ! | CAGTGATGATGAATGGGACT+TGG | + | chr3_4:12408065-12408084 | None:intergenic | 45.0% |
| ! | CCTATGGCAGTGATGATGAA+TGG | + | chr3_4:12408072-12408091 | None:intergenic | 45.0% |
| CCATTCATCATCACTGCCAT+AGG | - | chr3_4:12408069-12408088 | Msa0490750:CDS | 45.0% | |
| TTCATCATCACTGCCATAGG+GGG | - | chr3_4:12408072-12408091 | Msa0490750:CDS | 45.0% | |
| CATCACATCACAGAAATCCC+AGG | + | chr3_4:12408103-12408122 | None:intergenic | 45.0% | |
| ! | TTCGTGATGGTGATCTCTTG+AGG | - | chr3_4:12408146-12408165 | Msa0490750:CDS | 45.0% |
| GAGGTGCAATTTCACGAAAG+CGG | - | chr3_4:12408165-12408184 | Msa0490750:CDS | 45.0% | |
| AGGTGCAATTTCACGAAAGC+GGG | - | chr3_4:12408166-12408185 | Msa0490750:CDS | 45.0% | |
| ! | ATTCCTGGAGTAGCTTTTGG+CGG | + | chr3_4:12408456-12408475 | None:intergenic | 45.0% |
| !! | CAAGGAAGGAAGCATTGTCA+TGG | + | chr3_4:12408499-12408518 | None:intergenic | 45.0% |
| TGTGCTCAATGCACTTAGCT+TGG | - | chr3_4:12408852-12408871 | Msa0490750:CDS | 45.0% | |
| GGGACTGCATGATATGGAAA+AGG | - | chr3_4:12408903-12408922 | Msa0490750:CDS | 45.0% | |
| TGCTGCAACTCTGTTGCGAA+CGG | + | chr3_4:12403279-12403298 | None:intergenic | 50.0% | |
| GTTTGGCCATTGTTGCCTGT+TGG | + | chr3_4:12403326-12403345 | None:intergenic | 50.0% | |
| ! | GGTTTAGGGTTAGTGGTGGT+GGG | + | chr3_4:12403615-12403634 | None:intergenic | 50.0% |
| ! | TTCGGGTTTAGGGTTAGTGG+TGG | + | chr3_4:12403619-12403638 | None:intergenic | 50.0% |
| !! | GGTTTCGGGTTTAGGGTTAG+TGG | + | chr3_4:12403622-12403641 | None:intergenic | 50.0% |
| !! | GCATACGGGTTTCGGGTTTA+GGG | + | chr3_4:12403629-12403648 | None:intergenic | 50.0% |
| !! | TGCATACGGGTTTCGGGTTT+AGG | + | chr3_4:12403630-12403649 | None:intergenic | 50.0% |
| ! | GGGGATTTGAAACGACGGTT+TGG | + | chr3_4:12403734-12403753 | None:intergenic | 50.0% |
| TAAGCGTCTGTGAGGGTTTG+GGG | + | chr3_4:12403753-12403772 | None:intergenic | 50.0% | |
| GTAAGCGTCTGTGAGGGTTT+GGG | + | chr3_4:12403754-12403773 | None:intergenic | 50.0% | |
| TGTAAGCGTCTGTGAGGGTT+TGG | + | chr3_4:12403755-12403774 | None:intergenic | 50.0% | |
| !! | TTCGCCGCATTTTGGGGAAA+CGG | + | chr3_4:12403805-12403824 | None:intergenic | 50.0% |
| ! | GCGTTATCTTCGCCGCATTT+TGG | + | chr3_4:12403813-12403832 | None:intergenic | 50.0% |
| CGAGGATATCACACGGTTGT+AGG | - | chr3_4:12404069-12404088 | Msa0490750:intron | 50.0% | |
| AAGGTGTGGTGAGTCCTGAT+TGG | - | chr3_4:12404132-12404151 | Msa0490750:intron | 50.0% | |
| GGCGACAAAATCCCTTCTTG+CGG | + | chr3_4:12404329-12404348 | None:intergenic | 50.0% | |
| ACCAATGTGCTGCCTTGTGT+AGG | - | chr3_4:12404656-12404675 | Msa0490750:intron | 50.0% | |
| CCAATGTGCTGCCTTGTGTA+GGG | - | chr3_4:12404657-12404676 | Msa0490750:intron | 50.0% | |
| CAATGTGCTGCCTTGTGTAG+GGG | - | chr3_4:12404658-12404677 | Msa0490750:intron | 50.0% | |
| GTTTGCTTTGCAGAAGCTCG+AGG | - | chr3_4:12404781-12404800 | Msa0490750:intron | 50.0% | |
| AGCTCGAGGCTTGGAATTAC+GGG | - | chr3_4:12404795-12404814 | Msa0490750:intron | 50.0% | |
| GGGAAGAAATGGTTGGGTCA+TGG | - | chr3_4:12404830-12404849 | Msa0490750:intron | 50.0% | |
| ! | CCATCCCAGGTTTTCGGAAA+TGG | + | chr3_4:12404925-12404944 | None:intergenic | 50.0% |
| CCATTTCCGAAAACCTGGGA+TGG | - | chr3_4:12404922-12404941 | Msa0490750:intron | 50.0% | |
| ! | CGGTTTCCATCCCAGGTTTT+CGG | + | chr3_4:12404931-12404950 | None:intergenic | 50.0% |
| ! | CAATGATCGGTTTCCATCCC+AGG | + | chr3_4:12404938-12404957 | None:intergenic | 50.0% |
| CTGGGATGGAAACCGATCAT+TGG | - | chr3_4:12404936-12404955 | Msa0490750:intron | 50.0% | |
| GTCTAAGTTCGTCGGAGAAC+CGG | - | chr3_4:12405030-12405049 | Msa0490750:intron | 50.0% | |
| GTTAACTCTTGCGGAAGAGC+CGG | + | chr3_4:12405052-12405071 | None:intergenic | 50.0% | |
| AGTCTCCAAGCTGGAAAACC+GGG | - | chr3_4:12405713-12405732 | Msa0490750:intron | 50.0% | |
| ! | GAAAACCCGGTTTTCCAGCT+TGG | + | chr3_4:12405721-12405740 | None:intergenic | 50.0% |
| ! | AATCACTATTGGCTGCCTCG+GGG | + | chr3_4:12407482-12407501 | None:intergenic | 50.0% |
| ! | CAATCACTATTGGCTGCCTC+GGG | + | chr3_4:12407483-12407502 | None:intergenic | 50.0% |
| !! | ATCGTGGACTGGGTCATTCT+TGG | + | chr3_4:12407643-12407662 | None:intergenic | 50.0% |
| CACTTGGACTATCGTGGACT+GGG | + | chr3_4:12407653-12407672 | None:intergenic | 50.0% | |
| TCACTTGGACTATCGTGGAC+TGG | + | chr3_4:12407654-12407673 | None:intergenic | 50.0% | |
| CCTCTTCACTTGGACTATCG+TGG | + | chr3_4:12407659-12407678 | None:intergenic | 50.0% | |
| CCACGATAGTCCAAGTGAAG+AGG | - | chr3_4:12407656-12407675 | Msa0490750:CDS | 50.0% | |
| TGAGATGTTGTTCTGGTGGC+TGG | - | chr3_4:12407851-12407870 | Msa0490750:CDS | 50.0% | |
| GAGATGTTGTTCTGGTGGCT+GGG | - | chr3_4:12407852-12407871 | Msa0490750:CDS | 50.0% | |
| ! | GTGAAGAGCGGATTTCGTGA+TGG | - | chr3_4:12408133-12408152 | Msa0490750:CDS | 50.0% |
| ACCTCGCTGATGAGATCGTT+TGG | - | chr3_4:12408265-12408284 | Msa0490750:CDS | 50.0% | |
| CCTCGCTGATGAGATCGTTT+GGG | - | chr3_4:12408266-12408285 | Msa0490750:CDS | 50.0% | |
| TTTGGGAGAACCAACAGCGA+CGG | - | chr3_4:12408283-12408302 | Msa0490750:CDS | 50.0% | |
| ATCTATGACTCCGTCGCTGT+TGG | + | chr3_4:12408296-12408315 | None:intergenic | 50.0% | |
| ! | TTCCTGGAGTAGCTTTTGGC+GGG | + | chr3_4:12408455-12408474 | None:intergenic | 50.0% |
| ! | CTTAGCTTGGCCTCCTACAA+TGG | - | chr3_4:12408865-12408884 | Msa0490750:CDS | 50.0% |
| CACCTTGATGCCATTGTAGG+AGG | + | chr3_4:12408878-12408897 | None:intergenic | 50.0% | |
| GCTCACCTTGATGCCATTGT+AGG | + | chr3_4:12408881-12408900 | None:intergenic | 50.0% | |
| AATGGCATCAAGGTGAGCGA+GGG | - | chr3_4:12408883-12408902 | Msa0490750:CDS | 50.0% | |
| ! | GGGTTTAGGGTTAGTGGTGG+TGG | + | chr3_4:12403616-12403635 | None:intergenic | 55.0% |
| GTGTGGTGAGTCCTGATTGG+TGG | - | chr3_4:12404135-12404154 | Msa0490750:intron | 55.0% | |
| ! | TATGAAGGTGTGCACGGCGA+TGG | - | chr3_4:12404410-12404429 | Msa0490750:intron | 55.0% |
| CCCTACACAAGGCAGCACAT+TGG | + | chr3_4:12404660-12404679 | None:intergenic | 55.0% | |
| !! | TAGGGGCTGGTAGCGGTATT+CGG | - | chr3_4:12404675-12404694 | Msa0490750:intron | 55.0% |
| CTTTGCAGAAGCTCGAGGCT+TGG | - | chr3_4:12404786-12404805 | Msa0490750:intron | 55.0% | |
| CGAGGCTTGGAATTACGGGA+CGG | - | chr3_4:12404799-12404818 | Msa0490750:intron | 55.0% | |
| ! | TTGCTTGCCGCTGGCTGAAA+TGG | - | chr3_4:12405326-12405345 | Msa0490750:intron | 55.0% |
| TAGCAGGCTTCCACCAACAC+AGG | - | chr3_4:12405483-12405502 | Msa0490750:intron | 55.0% | |
| GCTTCCACCAACACAGGACA+CGG | - | chr3_4:12405489-12405508 | Msa0490750:intron | 55.0% | |
| TTCTCCGTGTCCTGTGTTGG+TGG | + | chr3_4:12405496-12405515 | None:intergenic | 55.0% | |
| ACCAACACAGGACACGGAGA+AGG | - | chr3_4:12405495-12405514 | Msa0490750:intron | 55.0% | |
| TCCTTCTCCGTGTCCTGTGT+TGG | + | chr3_4:12405499-12405518 | None:intergenic | 55.0% | |
| CACGCACATCCCATCAGAGA+CGG | + | chr3_4:12406171-12406190 | None:intergenic | 55.0% | |
| CTGATGGGATGTGCGTGCTT+TGG | - | chr3_4:12406174-12406193 | Msa0490750:intron | 55.0% | |
| TGAGCTGAAGCAGAGGCCTA+TGG | - | chr3_4:12406484-12406503 | Msa0490750:CDS | 55.0% | |
| AGTGGTGCGAACAGGAGTTG+CGG | + | chr3_4:12407153-12407172 | None:intergenic | 55.0% | |
| CCCAAACGATCTCATCAGCG+AGG | + | chr3_4:12408269-12408288 | None:intergenic | 55.0% | |
| CAGCGACGGAGTCATAGATG+TGG | - | chr3_4:12408297-12408316 | Msa0490750:CDS | 55.0% | |
| TTCCCGCCAAAAGCTACTCC+AGG | - | chr3_4:12408450-12408469 | Msa0490750:CDS | 55.0% | |
| GGCCTCCTACAATGGCATCA+AGG | - | chr3_4:12408873-12408892 | Msa0490750:CDS | 55.0% | |
| CAATGGCATCAAGGTGAGCG+AGG | - | chr3_4:12408882-12408901 | Msa0490750:CDS | 55.0% | |
| GAGCGAGGGACTGCATGATA+TGG | - | chr3_4:12408897-12408916 | Msa0490750:CDS | 55.0% | |
| CACGGTTGTAGGAGTGGGAG+AGG | - | chr3_4:12404080-12404099 | Msa0490750:intron | 60.0% | |
| TAGGAGTGGGAGAGGACGTG+TGG | - | chr3_4:12404088-12404107 | Msa0490750:intron | 60.0% | |
| GAGAGGGGTTGCCGCAAGAA+GGG | - | chr3_4:12404315-12404334 | Msa0490750:intron | 60.0% | |
| AAGCCGAGCTCTGCATTGCG+CGG | - | chr3_4:12404452-12404471 | Msa0490750:intron | 60.0% | |
| CAACCGCGCAATGCAGAGCT+CGG | + | chr3_4:12404458-12404477 | None:intergenic | 60.0% | |
| ! | CCTTGTGTAGGGGCTGGTAG+CGG | - | chr3_4:12404668-12404687 | Msa0490750:intron | 60.0% |
| TTTCGGGGATTGCTTGCCGC+TGG | - | chr3_4:12405317-12405336 | Msa0490750:intron | 60.0% | |
| !! | TGCCATAGGGGGACTAGCCT+GGG | - | chr3_4:12408083-12408102 | Msa0490750:CDS | 60.0% |
| ! | ATCCCAGGCTAGTCCCCCTA+TGG | + | chr3_4:12408088-12408107 | None:intergenic | 60.0% |
| GAGTGGGAGAGGACGTGTGG+CGG | - | chr3_4:12404091-12404110 | Msa0490750:intron | 65.0% | |
| GGAGAGGGGTTGCCGCAAGA+AGG | - | chr3_4:12404314-12404333 | Msa0490750:intron | 65.0% | |
| AGGTGTGCACGGCGATGGAG+AGG | - | chr3_4:12404415-12404434 | Msa0490750:intron | 65.0% | |
| GGTGTGCACGGCGATGGAGA+GGG | - | chr3_4:12404416-12404435 | Msa0490750:intron | 65.0% | |
| ! | CACGGCGATGGAGAGGGTGT+TGG | - | chr3_4:12404422-12404441 | Msa0490750:intron | 65.0% |
| !! | GGCGATGGAGAGGGTGTTGG+TGG | - | chr3_4:12404425-12404444 | Msa0490750:intron | 65.0% |
| CGAGCTCTGCATTGCGCGGT+TGG | - | chr3_4:12404456-12404475 | Msa0490750:intron | 65.0% | |
| GTGCTGCCTTGTGTAGGGGC+TGG | - | chr3_4:12404662-12404681 | Msa0490750:intron | 65.0% | |
| CCGCTACCAGCCCCTACACA+AGG | + | chr3_4:12404671-12404690 | None:intergenic | 65.0% | |
| GGCACCTCAGCAAATCCCCG+AGG | - | chr3_4:12407464-12407483 | Msa0490750:CDS | 65.0% | |
| !! | GCTGCCTCGGGGATTTGCTG+AGG | + | chr3_4:12407471-12407490 | None:intergenic | 65.0% |
| !! | CTGCCATAGGGGGACTAGCC+TGG | - | chr3_4:12408082-12408101 | Msa0490750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 12403237 | 12408966 | 12403237 | ID=Msa0490750;Name=Msa0490750 |
| chr3_4 | mRNA | 12403237 | 12408966 | 12403237 | ID=Msa0490750-mRNA-1;Parent=Msa0490750;Name=Msa0490750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.8|1|0.25|0.2|5|409|833 |
| chr3_4 | exon | 12403237 | 12403371 | 12403237 | ID=Msa0490750-mRNA-1:exon:3858;Parent=Msa0490750-mRNA-1 |
| chr3_4 | exon | 12405665 | 12405715 | 12405665 | ID=Msa0490750-mRNA-1:exon:3857;Parent=Msa0490750-mRNA-1 |
| chr3_4 | exon | 12405737 | 12405797 | 12405737 | ID=Msa0490750-mRNA-1:exon:3856;Parent=Msa0490750-mRNA-1 |
| chr3_4 | exon | 12406183 | 12408659 | 12406183 | ID=Msa0490750-mRNA-1:exon:3855;Parent=Msa0490750-mRNA-1 |
| chr3_4 | exon | 12408780 | 12408966 | 12408780 | ID=Msa0490750-mRNA-1:exon:3854;Parent=Msa0490750-mRNA-1 |
| chr3_4 | CDS | 12408780 | 12408966 | 12408780 | ID=Msa0490750-mRNA-1:cds;Parent=Msa0490750-mRNA-1 |
| chr3_4 | CDS | 12406345 | 12408659 | 12406345 | ID=Msa0490750-mRNA-1:cds;Parent=Msa0490750-mRNA-1 |
| chr3_4 | three_prime_UTR | 12406183 | 12406344 | 12406183 | ID=Msa0490750-mRNA-1:three_prime_utr;Parent=Msa0490750-mRNA-1 |
| chr3_4 | three_prime_UTR | 12405737 | 12405797 | 12405737 | ID=Msa0490750-mRNA-1:three_prime_utr;Parent=Msa0490750-mRNA-1 |
| chr3_4 | three_prime_UTR | 12405665 | 12405715 | 12405665 | ID=Msa0490750-mRNA-1:three_prime_utr;Parent=Msa0490750-mRNA-1 |
| chr3_4 | three_prime_UTR | 12403237 | 12403371 | 12403237 | ID=Msa0490750-mRNA-1:three_prime_utr;Parent=Msa0490750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
