AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171830 MtrunA17_Chr8g0387181 97.611 628 15 0 1 628 1 628 0.0 1279
Msa1171830 MtrunA17_Chr8g0387141 74.686 636 113 6 1 628 1 596 0.0 939
Msa1171830 MtrunA17_Chr1g0186281 68.671 632 135 11 1 622 1 579 0.0 810
Msa1171830 MtrunA17_Chr1g0186261 68.038 632 142 9 1 622 1 582 0.0 808
Msa1171830 MtrunA17_Chr1g0186191 66.839 579 134 8 45 622 68 589 0.0 738
Msa1171830 MtrunA17_Chr8g0387161 85.427 199 29 0 430 628 99 297 1.30e-119 357
Msa1171830 MtrunA17_Chr8g0387161 75.758 99 24 0 249 347 1 99 2.23e-42 154
Msa1171830 MtrunA17_Chr6g0479271 57.429 350 87 6 175 522 7 296 3.32e-110 334
Msa1171830 MtrunA17_Chr6g0479271 78.378 37 8 0 592 628 292 328 4.62e-12 67.8
Msa1171830 MtrunA17_Chr7g0248041 37.076 383 180 9 234 609 243 571 4.95e-68 232
Msa1171830 MtrunA17_Chr7g0248041 57.377 61 26 0 60 120 1 61 3.23e-12 69.7
Msa1171830 MtrunA17_Chr8g0348691 52.000 175 80 3 425 595 76 250 5.71e-53 182
Msa1171830 MtrunA17_Chr6g0453251 69.048 126 32 2 1 119 1 126 7.36e-49 166
Msa1171830 MtrunA17_Chr5g0420461 48.182 220 45 5 309 527 19 170 6.92e-42 150
Msa1171830 MtrunA17_Chr5g0420461 75.610 41 10 0 588 628 157 197 6.85e-14 70.9
Msa1171830 MtrunA17_Chr7g0241681 38.012 171 98 2 424 588 193 361 6.14e-29 118
Msa1171830 MtrunA17_Chr3g0086341 39.891 183 95 6 423 593 147 326 8.52e-26 111
Msa1171830 MtrunA17_Chr7g0241661 30.387 181 118 2 414 588 175 353 4.29e-20 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171830 AT4G11400.2 34.522 617 327 17 26 627 19 573 6.91e-98 311
Msa1171830 AT4G11400.1 34.522 617 327 17 26 627 19 573 6.91e-98 311
Msa1171830 AT2G46040.3 46.199 171 88 3 427 594 362 531 1.41e-39 153
Msa1171830 AT2G46040.3 27.157 313 195 9 35 336 47 337 1.76e-20 95.9
Msa1171830 AT2G46040.1 46.199 171 88 3 427 594 362 531 1.41e-39 153
Msa1171830 AT2G46040.1 27.157 313 195 9 35 336 47 337 1.76e-20 95.9
Msa1171830 AT2G46040.2 46.199 171 88 3 427 594 376 545 1.91e-39 153
Msa1171830 AT2G46040.2 27.157 313 195 9 35 336 61 351 1.68e-20 96.3
Msa1171830 AT5G04110.1 39.130 161 86 4 425 574 361 520 4.75e-27 116
Msa1171830 AT5G04110.3 39.130 161 86 4 425 574 361 520 4.75e-27 116
Msa1171830 AT5G04110.2 39.130 161 86 4 425 574 362 521 4.96e-27 116
Msa1171830 AT2G03470.1 34.896 192 102 6 423 599 121 304 1.72e-21 98.2
Msa1171830 AT2G03470.2 34.896 192 102 6 423 599 120 303 1.92e-21 98.2
Msa1171830 AT1G13880.3 35.359 181 103 4 423 593 127 303 2.14e-21 97.8
Msa1171830 AT1G13880.1 35.359 181 103 4 423 593 126 302 2.24e-21 97.8
Msa1171830 AT1G13880.2 35.359 181 103 4 423 593 136 312 2.69e-21 97.4
Msa1171830 AT1G26580.3 31.429 210 124 5 418 609 62 269 8.72e-21 95.9
Msa1171830 AT1G26580.2 31.429 210 124 5 418 609 128 335 1.34e-20 95.9
Msa1171830 AT1G26580.1 31.429 210 124 5 418 609 128 335 1.34e-20 95.9
Msa1171830 AT5G04110.4 37.241 145 79 4 425 558 361 504 2.65e-19 92.0

Find 163 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTCCCATTTGTTATTT+TGG 0.062612 8_1:-1753144 None:intergenic
TCGGAGCACTTTCAAGTTTA+TGG 0.095722 8_1:+1757622 Msa1171830:three_prime_UTR
CAAGAGTGATGGTTATTTAT+TGG 0.189535 8_1:+1753111 Msa1171830:CDS
TCATTGGGGATTTGATAAAA+TGG 0.191990 8_1:+1756826 Msa1171830:CDS
TATCATCACCGTCAACATTT+TGG 0.205466 8_1:-1753168 None:intergenic
CCTTTAGATTTGAGCATAAA+AGG 0.207974 8_1:-1753021 None:intergenic
TTCTTCCTTGTGAAGGAAAA+AGG 0.229657 8_1:+1752779 Msa1171830:CDS
AGCTATAGGTCTTGATTATC+AGG 0.237722 8_1:+1752312 Msa1171830:five_prime_UTR
GATGATGACGAAGTTGAATT+TGG 0.250331 8_1:+1757067 Msa1171830:CDS
TTATACTCCTTCCACCTTGA+TGG 0.254585 8_1:-1753373 None:intergenic
AATTTGATCACAAATAAATA+AGG 0.271584 8_1:-1752502 None:intergenic
CTTTGCTGCAATTCATGTTC+TGG 0.273535 8_1:+1756338 Msa1171830:CDS
GTATACACAAAATTGATAAA+AGG 0.274115 8_1:-1752367 None:intergenic
TGATGAAGAAAAGAGATTTA+AGG 0.278264 8_1:+1756877 Msa1171830:CDS
TGCCTTGTTTCGAAAGTATC+TGG 0.279788 8_1:-1756954 None:intergenic
CACCTTGATGGTTCTGGTAA+TGG 0.297194 8_1:-1753361 None:intergenic
CGCTAACTGTGCACCCTTCA+AGG 0.311246 8_1:-1757482 None:intergenic
CACTCCAAGCAATCCATATA+TGG 0.312317 8_1:-1757130 None:intergenic
GTGGTTGATGCGTTGGAATT+TGG 0.314259 8_1:+1757355 Msa1171830:three_prime_UTR
ACAAGATCTGTTTCGGTAGT+AGG 0.317915 8_1:-1756686 None:intergenic
TTTCTCTTCTCAGTTGCATC+TGG 0.327601 8_1:-1756473 None:intergenic
GTCTATTGGGTGCTCCTTGA+AGG 0.329665 8_1:+1757468 Msa1171830:three_prime_UTR
CTCTACTACAATTCTCCTTT+AGG 0.334096 8_1:-1752694 None:intergenic
CTTCTCAGTTGCATCTGGTT+TGG 0.334667 8_1:-1756468 None:intergenic
GAGAAAATCTGAGCCATCTA+TGG 0.335639 8_1:+1756526 Msa1171830:CDS
ATAATTCTCGCAAACGTAAA+CGG 0.342533 8_1:+1753269 Msa1171830:CDS
TCCTTCCACCTTGATGGTTC+TGG 0.342765 8_1:-1753367 None:intergenic
TGGAATTTGGAAAGCCACTA+TGG 0.353008 8_1:+1757368 Msa1171830:three_prime_UTR
TTTCTGAGAGTGACTCTAAA+TGG 0.355739 8_1:+1756624 Msa1171830:CDS
TTCAGTGACGACGTCTGGTT+TGG 0.357587 8_1:-1756429 None:intergenic
CGTCTAGACGCTGAATTTCA+TGG 0.359710 8_1:+1752587 Msa1171830:CDS
AGCTATCAAGCATCCATATA+TGG 0.363115 8_1:+1757117 Msa1171830:CDS
CGTAAACGGGAATCGATATC+AGG 0.372781 8_1:+1753283 Msa1171830:CDS
AATGGTTAGGCACACAAGTA+TGG 0.373689 8_1:+1756642 Msa1171830:CDS
GAAGTTGAATTTGGATCTTT+TGG 0.375334 8_1:+1757076 Msa1171830:CDS
CATTGGGGATTTGATAAAAT+GGG 0.380212 8_1:+1756827 Msa1171830:CDS
GACATGATTATGTTGTAAAA+TGG 0.380277 8_1:+1757443 Msa1171830:three_prime_UTR
GGATAAAAGTTGAGGAGGGG+GGG 0.388456 8_1:-1757517 None:intergenic
ATTGCACGGTTCAGTCAATA+TGG 0.388593 8_1:+1756373 Msa1171830:CDS
GGATTCTGTGATAATTGAAA+TGG 0.394907 8_1:+1752835 Msa1171830:CDS
TATGAAGAGTTATGACCATT+TGG 0.396880 8_1:-1752343 None:intergenic
GTTGTAAAATGGCAGTCTAT+TGG 0.401172 8_1:+1757454 Msa1171830:three_prime_UTR
TGATGTTACTTGATTCTAAC+GGG 0.404597 8_1:-1753063 None:intergenic
CGAAAATCATCATCCATAGA+TGG 0.407291 8_1:-1756539 None:intergenic
CTGCAATTCATGTTCTGGTA+AGG 0.408572 8_1:+1756343 Msa1171830:CDS
TAATTCTCGCAAACGTAAAC+GGG 0.414761 8_1:+1753270 Msa1171830:CDS
GGGATAAAAGTTGAGGAGGG+GGG 0.421652 8_1:-1757518 None:intergenic
GCGGTTGTATTGTTGAGTAT+CGG 0.426228 8_1:+1752615 Msa1171830:CDS
TCTCCCAACAAGATCTGTTT+CGG 0.428135 8_1:-1756693 None:intergenic
TCTGGTAATGGTGGAGCTAC+AGG 0.429826 8_1:-1753349 None:intergenic
GTACCATCAACATATACAAA+AGG 0.430239 8_1:+1752457 Msa1171830:five_prime_UTR
CTAATTACCAAAATAACAAA+TGG 0.432389 8_1:+1753137 Msa1171830:CDS
GATTTCATATTGCTGAGAAC+AGG 0.435888 8_1:+1756768 Msa1171830:CDS
TTGTTCAGTTGCTGAGGGCA+AGG 0.439451 8_1:+1753413 Msa1171830:CDS
CCGGAACTTCCGCTTGGAAA+AGG 0.440137 8_1:-1756586 None:intergenic
GAAACTACACCAGTCCATTC+CGG 0.442162 8_1:-1756605 None:intergenic
TGGGAAGATGATCCACCATT+TGG 0.442630 8_1:-1753466 None:intergenic
CATATACAAAAGGGCTAGCT+AGG 0.447091 8_1:+1752467 Msa1171830:five_prime_UTR
TCAAGGTGGAAGGAGTATAA+AGG 0.452997 8_1:+1753376 Msa1171830:CDS
TTGTAAAATGGCAGTCTATT+GGG 0.453539 8_1:+1757455 Msa1171830:three_prime_UTR
TATACACAAAATTGATAAAA+GGG 0.460354 8_1:-1752366 None:intergenic
CTACCGAAACAGATCTTGTT+GGG 0.462379 8_1:+1756690 Msa1171830:CDS
CGGTTGTATTGTTGAGTATC+GGG 0.464313 8_1:+1752616 Msa1171830:CDS
CGATATCAGGAATGGTGAAC+TGG 0.466029 8_1:+1753296 Msa1171830:CDS
GACGCTGAATTTCATGGAAA+CGG 0.467095 8_1:+1752593 Msa1171830:CDS
AGTCAGACGTTCATGGCAAA+CGG 0.467323 8_1:+1752551 Msa1171830:exon
CAGCACTAATGAAAACCAAA+AGG 0.467703 8_1:-1757539 None:intergenic
GCATCCATATATGGATTGCT+TGG 0.469079 8_1:+1757126 Msa1171830:CDS
CGGTATCGAGAAAAGGGTTG+TGG 0.472038 8_1:+1752813 Msa1171830:CDS
CAGCACAAATGCTGTCCAAA+AGG 0.476215 8_1:-1757583 None:intergenic
CGTGAAAAGCTTGTTTCTGT+AGG 0.477267 8_1:+1756560 Msa1171830:CDS
TCATCGCTGTCAACAGTCTT+CGG 0.477687 8_1:-1757049 None:intergenic
TCTCCGAGCATCACCGGCAT+TGG 0.482085 8_1:-1752728 None:intergenic
TATGATGCGGTATCGAGAAA+AGG 0.483215 8_1:+1752806 Msa1171830:CDS
GATTCTGTGATAATTGAAAT+GGG 0.484845 8_1:+1752836 Msa1171830:CDS
GTCAGACGTTCATGGCAAAC+GGG 0.485222 8_1:+1752552 Msa1171830:exon
AGGGATAAAAGTTGAGGAGG+GGG 0.488374 8_1:-1757519 None:intergenic
CGGTGACAACAATGAAATGA+AGG 0.489011 8_1:-1752263 None:intergenic
GAGAGTGACTCTAAATGGTT+AGG 0.492462 8_1:+1756629 Msa1171830:CDS
CAGCGAGATTTAACAGAGAC+AGG 0.494477 8_1:-1756314 None:intergenic
AAGTGTAGCTGCAACGTTCA+AGG 0.494639 8_1:+1756728 Msa1171830:CDS
TGTTCAGTTGCTGAGGGCAA+GGG 0.496056 8_1:+1753414 Msa1171830:CDS
GGAGTCAGAAATATGTCCTC+TGG 0.498373 8_1:+1756394 Msa1171830:CDS
ACTACCGAAACAGATCTTGT+TGG 0.499677 8_1:+1756689 Msa1171830:CDS
AACAGAGAGTCAGACGTTCA+TGG 0.503202 8_1:+1752544 Msa1171830:exon
AAGAGGAGTGGTTGATGCGT+TGG 0.510564 8_1:+1757348 Msa1171830:three_prime_UTR
TCCATTCCGGAACTTCCGCT+TGG 0.513689 8_1:-1756592 None:intergenic
GTGAGGAAGTTTCACTTCGA+TGG 0.516591 8_1:+1756849 Msa1171830:CDS
TACCATCAACATATACAAAA+GGG 0.517904 8_1:+1752458 Msa1171830:five_prime_UTR
ATGCCGGTGATGCTCGGAGA+TGG 0.521994 8_1:+1752731 Msa1171830:CDS
GATTTAGAACATGTCCATAG+TGG 0.528201 8_1:-1757382 None:intergenic
TAATTACCAAAATAACAAAT+GGG 0.533109 8_1:+1753138 Msa1171830:CDS
ATGATGTTACTTGATTCTAA+CGG 0.535061 8_1:-1753064 None:intergenic
TATCAGGTAAATCTGCCAAA+TGG 0.535518 8_1:+1752328 Msa1171830:five_prime_UTR
TCTATTGGGTGCTCCTTGAA+GGG 0.537436 8_1:+1757469 Msa1171830:three_prime_UTR
TTGTTTCGAAAGTATCTGGA+TGG 0.538515 8_1:-1756950 None:intergenic
GGTGGAGCTACAGGATCAAA+CGG 0.540327 8_1:-1753340 None:intergenic
ATCTCAATTTCACTGTACCT+TGG 0.540348 8_1:-1756277 None:intergenic
CTCAAAGATTTCCACACAAG+AGG 0.541018 8_1:-1753239 None:intergenic
TTGTGTGGAAATCTTTGAGA+AGG 0.542263 8_1:+1753243 Msa1171830:CDS
GCGGAAGTTCCGGAATGGAC+TGG 0.543878 8_1:+1756596 Msa1171830:CDS
AGGCCAATGCCGGTGATGCT+CGG 0.544289 8_1:+1752725 Msa1171830:CDS
TCAACTGTTCTTCCTTGTGA+AGG 0.544693 8_1:+1752772 Msa1171830:CDS
GGGATTTGATAAAATGGGTG+AGG 0.544818 8_1:+1756832 Msa1171830:CDS
TCACGGATGCCAAAACATGA+AGG 0.545005 8_1:-1752865 None:intergenic
TGCAATTCATGTTCTGGTAA+GGG 0.545401 8_1:+1756344 Msa1171830:CDS
GGACCATCTCCGAGCATCAC+CGG 0.547780 8_1:-1752734 None:intergenic
AAAATTCGGCAATGGTGTTG+AGG 0.550666 8_1:+1753204 Msa1171830:CDS
ATGATGCGGTATCGAGAAAA+GGG 0.552445 8_1:+1752807 Msa1171830:CDS
ATAAATAACCATCACTCTTG+TGG 0.553747 8_1:-1753108 None:intergenic
TCAACCACTCCTCTTCTAGC+TGG 0.556029 8_1:-1757340 None:intergenic
GAAGGAGTATAAAGGAGGCC+AGG 0.557635 8_1:+1753384 Msa1171830:CDS
AGTTCTAAGAAATAGAATGA+AGG 0.557779 8_1:+1751994 Msa1171830:five_prime_UTR
AAGAAAGAACCAGCTAGAAG+AGG 0.560607 8_1:+1757331 Msa1171830:three_prime_UTR
CACCATTACCAGAACCATCA+AGG 0.561316 8_1:+1753359 Msa1171830:CDS
GGTATCGAGAAAAGGGTTGT+GGG 0.561504 8_1:+1752814 Msa1171830:CDS
TGTTCTGTCTGTGAGAAAGC+AGG 0.562735 8_1:+1753438 Msa1171830:CDS
AGCACTAATGAAAACCAAAA+GGG 0.565460 8_1:-1757538 None:intergenic
TCCAAGCGGAAGTTCCGGAA+TGG 0.566498 8_1:+1756591 Msa1171830:CDS
AGGCATTGTGAGGCCAATGC+CGG 0.566829 8_1:+1752715 Msa1171830:CDS
GATGCATCCTGCCATGTATG+AGG 0.570606 8_1:+1756235 Msa1171830:CDS
TACCAAAATAACAAATGGGA+GGG 0.570891 8_1:+1753142 Msa1171830:CDS
ATTCAGCGTCTAGACGATCA+AGG 0.572295 8_1:-1752580 None:intergenic
CAGGAATGGTGAACTGGACA+CGG 0.572522 8_1:+1753302 Msa1171830:CDS
CTTGATGGTTCTGGTAATGG+TGG 0.573107 8_1:-1753358 None:intergenic
GTGACGGTGTTGGTACTAGC+TGG 0.575249 8_1:-1752178 None:intergenic
TTTGTTAACCACAAGAGTGA+TGG 0.575780 8_1:+1753100 Msa1171830:CDS
TGAAATTGAGATATAGTGAA+AGG 0.576187 8_1:+1756288 Msa1171830:CDS
ACATGATCCTCATACATGGC+AGG 0.576377 8_1:-1756242 None:intergenic
CTGTAAAACTATCGTTCAGT+CGG 0.581173 8_1:+1757603 Msa1171830:three_prime_UTR
AAAGGGATAAAAGTTGAGGA+GGG 0.585688 8_1:-1757521 None:intergenic
GGTAAGGGAAATAAATTGCA+CGG 0.586625 8_1:+1756359 Msa1171830:CDS
AAATGGTGGATCATCTTCCC+AGG 0.587670 8_1:+1753468 Msa1171830:CDS
ACCAAAAGGGATAAAAGTTG+AGG 0.589425 8_1:-1757525 None:intergenic
ATCCAGATACTTTCGAAACA+AGG 0.591847 8_1:+1756952 Msa1171830:CDS
AAGGGATAAAAGTTGAGGAG+GGG 0.595746 8_1:-1757520 None:intergenic
TTATCTAGCTGCCTCTTGTG+TGG 0.597731 8_1:+1753228 Msa1171830:CDS
ACGGGAATCGATATCAGGAA+TGG 0.603553 8_1:+1753288 Msa1171830:CDS
CTAAAGGAGAATTGTAGTAG+AGG 0.604171 8_1:+1752695 Msa1171830:CDS
AGCAACATGATCCTCATACA+TGG 0.604798 8_1:-1756246 None:intergenic
AAATGCTGTCCAAAAGGTGA+AGG 0.605978 8_1:-1757577 None:intergenic
ACCAGAACCATCAAGGTGGA+AGG 0.609801 8_1:+1753366 Msa1171830:CDS
TTACCAAAATAACAAATGGG+AGG 0.613410 8_1:+1753141 Msa1171830:CDS
GAGGGTGTCCAAAATGTTGA+CGG 0.617850 8_1:+1753160 Msa1171830:CDS
ATAATTGATTGTGACGGTGT+TGG 0.621424 8_1:-1752188 None:intergenic
TCAGCAAAACATTCGAAGAG+AGG 0.626443 8_1:+1752930 Msa1171830:CDS
AGAAAGCAGGCTGAACCAAA+TGG 0.632421 8_1:+1753451 Msa1171830:CDS
GAAACAGATCTTGTTGGGAG+AGG 0.634208 8_1:+1756695 Msa1171830:CDS
AAAAGGGATAAAAGTTGAGG+AGG 0.636087 8_1:-1757522 None:intergenic
CTTGTTGGGAGAGGAAGACG+AGG 0.636192 8_1:+1756704 Msa1171830:CDS
GGTGACAACAATGAAATGAA+GGG 0.649168 8_1:-1752262 None:intergenic
AGAACCAGCTAGAAGAGGAG+TGG 0.649931 8_1:+1757336 Msa1171830:three_prime_UTR
AGTTGATATAAATCAAGCAA+CGG 0.651746 8_1:-1752755 None:intergenic
AAGCAGGCTGAACCAAATGG+TGG 0.656382 8_1:+1753454 Msa1171830:CDS
AGAGATTTAAGGATGCAATG+AGG 0.659010 8_1:+1756888 Msa1171830:CDS
AAACAAGGCAAGAAAAGACA+TGG 0.666046 8_1:+1756967 Msa1171830:CDS
CATGTTGCTCTTAGTCACCA+AGG 0.670434 8_1:+1756260 Msa1171830:CDS
AAATCCCCAATGATAAAACA+CGG 0.674548 8_1:-1756816 None:intergenic
AGGTGGAAGGAGTATAAAGG+AGG 0.679711 8_1:+1753379 Msa1171830:CDS
ATTGTAGTAGAGGCATTGTG+AGG 0.687619 8_1:+1752705 Msa1171830:CDS
GCTGAATTTCATGGAAACGG+CGG 0.703390 8_1:+1752596 Msa1171830:CDS
TTATTGATAATTGATTGTGA+CGG 0.709411 8_1:-1752194 None:intergenic
CATTACCAGAACCATCAAGG+TGG 0.750119 8_1:+1753362 Msa1171830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTACAAATTTTATTTG+TGG + chr8_1:1757668-1757687 Msa1171830:three_prime_UTR 10.0%
!!! ATCAATTATCAATAATTTTC+AGG + chr8_1:1752202-1752221 Msa1171830:five_prime_UTR 15.0%
!! AACTAATACAATTACAAAAA+TGG - chr8_1:1752289-1752308 None:intergenic 15.0%
!! TATACACAAAATTGATAAAA+GGG - chr8_1:1752369-1752388 None:intergenic 15.0%
!! AATTTGATCACAAATAAATA+AGG - chr8_1:1752505-1752524 None:intergenic 15.0%
!!! TTTGTTTTGTCAAATTTTTT+CGG + chr8_1:1752667-1752686 Msa1171830:CDS 15.0%
!!! TTTTTCATAAACTAATTTCA+CGG - chr8_1:1752885-1752904 None:intergenic 15.0%
!! TAATTACCAAAATAACAAAT+GGG + chr8_1:1753138-1753157 Msa1171830:CDS 15.0%
!! AATCCTGTATAAAATAATTA+TGG - chr8_1:1753507-1753526 None:intergenic 15.0%
!!! AAAAATACCATATTTTTGTT+TGG + chr8_1:1754533-1754552 Msa1171830:intron 15.0%
!!! TTATTGATAATTGATTGTGA+CGG - chr8_1:1752197-1752216 None:intergenic 20.0%
!! TAATACAATTACAAAAATGG+CGG - chr8_1:1752286-1752305 None:intergenic 20.0%
!! GTATACACAAAATTGATAAA+AGG - chr8_1:1752370-1752389 None:intergenic 20.0%
!!! AATTCTTTTTCTAGATCTAT+CGG - chr8_1:1752995-1753014 None:intergenic 20.0%
!! CTAATTACCAAAATAACAAA+TGG + chr8_1:1753137-1753156 Msa1171830:CDS 20.0%
!!! ATGCCATAATTATTTTATAC+AGG + chr8_1:1753501-1753520 Msa1171830:intron 20.0%
!!! TAAGAAAAGATTCCTTTTTT+AGG + chr8_1:1753738-1753757 Msa1171830:intron 20.0%
!! TATGTAACCAAACAAAAATA+TGG - chr8_1:1754543-1754562 None:intergenic 20.0%
!! CTTGATTCTAAGTTATTTAT+AGG - chr8_1:1754867-1754886 None:intergenic 20.0%
!! ATAATAAATTAGTAATGTCC+AGG + chr8_1:1754957-1754976 Msa1171830:intron 20.0%
!! CATTAGACATTATTAATGAT+AGG - chr8_1:1755411-1755430 None:intergenic 20.0%
!! CATTAATAATGTCTAATGAT+AGG + chr8_1:1755413-1755432 Msa1171830:intron 20.0%
!! TTTATTTATCAAGTGTTATG+TGG + chr8_1:1756164-1756183 Msa1171830:intron 20.0%
!!! AAATTTTGGTGTAATATAGA+TGG + chr8_1:1757302-1757321 Msa1171830:intron 20.0%
!! TCATAAAAATTTTTGTTGGG+AGG + chr8_1:1751971-1751990 Msa1171830:five_prime_UTR 25.0%
!!! AGTTCTAAGAAATAGAATGA+AGG + chr8_1:1751994-1752013 Msa1171830:five_prime_UTR 25.0%
!!! TTGTATTAGTTTTCAGCTAT+AGG + chr8_1:1752298-1752317 Msa1171830:five_prime_UTR 25.0%
! TACCATCAACATATACAAAA+GGG + chr8_1:1752458-1752477 Msa1171830:five_prime_UTR 25.0%
!!! AATTTTTTCGGTTTACCTAA+AGG + chr8_1:1752679-1752698 Msa1171830:CDS 25.0%
!! AGTTGATATAAATCAAGCAA+CGG - chr8_1:1752758-1752777 None:intergenic 25.0%
! GATTCTGTGATAATTGAAAT+GGG + chr8_1:1752836-1752855 Msa1171830:CDS 25.0%
!! AAATATCTGAGTGATTTTGA+AGG + chr8_1:1752902-1752921 Msa1171830:CDS 25.0%
!! ATGATGTTACTTGATTCTAA+CGG - chr8_1:1753067-1753086 None:intergenic 25.0%
!!! ATTGATGATGACGAAAAATT+CGG + chr8_1:1753190-1753209 Msa1171830:CDS 25.0%
!! TTATACAGGATTTTACACAT+TGG + chr8_1:1753515-1753534 Msa1171830:intron 25.0%
! ATAATATAACATACTCCATC+CGG + chr8_1:1753706-1753725 Msa1171830:intron 25.0%
!! TCTTTTCTTATATATGAGAC+CGG - chr8_1:1753728-1753747 None:intergenic 25.0%
! TTAATCGATGAACCTAAAAA+AGG - chr8_1:1753753-1753772 None:intergenic 25.0%
! CATTGAATAATTAACGTATC+TGG - chr8_1:1753802-1753821 None:intergenic 25.0%
!! ACTTTTCTTATATATGAGAC+CGG + chr8_1:1753837-1753856 Msa1171830:intron 25.0%
! TCAACAAAAGAAAGATATCA+TGG + chr8_1:1753939-1753958 Msa1171830:intron 25.0%
!!! CACATTAATTGGTATTGATT+GGG - chr8_1:1754118-1754137 None:intergenic 25.0%
! AATATGAATCTCGATTCATT+GGG + chr8_1:1754163-1754182 Msa1171830:intron 25.0%
! TGAATCTGATTATGAATCAT+CGG - chr8_1:1754567-1754586 None:intergenic 25.0%
! CAAGATTTAAACTGTGAATT+CGG - chr8_1:1754615-1754634 None:intergenic 25.0%
!! AAGTTAAGTTCTAATGCAAA+AGG - chr8_1:1754809-1754828 None:intergenic 25.0%
!! AATTTAGGGTTACAAAAGTT+AGG - chr8_1:1754988-1755007 None:intergenic 25.0%
! GAACATGTTAACAAATAAAC+AGG - chr8_1:1755024-1755043 None:intergenic 25.0%
! TTAACATGTTCAACTTGAAT+TGG + chr8_1:1755033-1755052 Msa1171830:intron 25.0%
! TAACATGTTCAACTTGAATT+GGG + chr8_1:1755034-1755053 Msa1171830:intron 25.0%
! AACTTAAAGACAAGTTCAAA+AGG - chr8_1:1755220-1755239 None:intergenic 25.0%
!!! TATGTTACTTTCTAAACTTC+TGG + chr8_1:1755261-1755280 Msa1171830:intron 25.0%
! TGTAGTCAATCATATCATAA+GGG - chr8_1:1755367-1755386 None:intergenic 25.0%
! ATGTAGTCAATCATATCATA+AGG - chr8_1:1755368-1755387 None:intergenic 25.0%
! TTATGATATGATTGACTACA+TGG + chr8_1:1755367-1755386 Msa1171830:intron 25.0%
! TCAAATCCTTCTGATAATTT+AGG + chr8_1:1755446-1755465 Msa1171830:intron 25.0%
! CTATAACCTAAATTATCAGA+AGG - chr8_1:1755455-1755474 None:intergenic 25.0%
!!! ATTTAGGTTATAGTTTTCCA+TGG + chr8_1:1755462-1755481 Msa1171830:intron 25.0%
! ATTGAATAGTTAGAGGTAAA+GGG - chr8_1:1755491-1755510 None:intergenic 25.0%
! AATTGAATAGTTAGAGGTAA+AGG - chr8_1:1755492-1755511 None:intergenic 25.0%
! TATTCAATTACCGTCTATAT+GGG + chr8_1:1755503-1755522 Msa1171830:intron 25.0%
!!! AATTCCATTAGTCACTTTTA+TGG + chr8_1:1755959-1755978 Msa1171830:intron 25.0%
! AAATCCATAAAAGTGACTAA+TGG - chr8_1:1755966-1755985 None:intergenic 25.0%
! TATGGATTTGTATAAAACAC+AGG + chr8_1:1755977-1755996 Msa1171830:intron 25.0%
! ATTTGTATAAAACACAGGAA+AGG + chr8_1:1755982-1756001 Msa1171830:intron 25.0%
! TGATATCAAAACATTGAGAA+AGG + chr8_1:1756107-1756126 Msa1171830:intron 25.0%
! TGAAATTGAGATATAGTGAA+AGG + chr8_1:1756288-1756307 Msa1171830:CDS 25.0%
!! TTCTCTTTTCAGTAATATCT+GGG - chr8_1:1756511-1756530 None:intergenic 25.0%
!! TTTCTCTTTTCAGTAATATC+TGG - chr8_1:1756512-1756531 None:intergenic 25.0%
! TGATGAAGAAAAGAGATTTA+AGG + chr8_1:1756877-1756896 Msa1171830:CDS 25.0%
! ACCAAAATTTCTTAGTGAAA+GGG - chr8_1:1757292-1757311 None:intergenic 25.0%
! GACATGATTATGTTGTAAAA+TGG + chr8_1:1757443-1757462 Msa1171830:three_prime_UTR 25.0%
!!! TTCAAGTTTATGGTTTTAGT+TGG + chr8_1:1757632-1757651 Msa1171830:three_prime_UTR 25.0%
!!! TTACAAATTTTATTTGTGGC+AGG + chr8_1:1757672-1757691 Msa1171830:three_prime_UTR 25.0%
ATAAAATCCCTATCTTCTCT+CGG - chr8_1:1752033-1752052 None:intergenic 30.0%
CGCGAAAATAAATGACTAAA+AGG - chr8_1:1752073-1752092 None:intergenic 30.0%
TATGAAGAGTTATGACCATT+TGG - chr8_1:1752346-1752365 None:intergenic 30.0%
GTACCATCAACATATACAAA+AGG + chr8_1:1752457-1752476 Msa1171830:five_prime_UTR 30.0%
GGATTCTGTGATAATTGAAA+TGG + chr8_1:1752835-1752854 Msa1171830:CDS 30.0%
AAGAGAGGAGTTTGAAAAAT+GGG + chr8_1:1752945-1752964 Msa1171830:CDS 30.0%
AGTTTGAAAAATGGGAATCA+TGG + chr8_1:1752953-1752972 Msa1171830:CDS 30.0%
GTTTGAAAAATGGGAATCAT+GGG + chr8_1:1752954-1752973 Msa1171830:CDS 30.0%
CCTTTAGATTTGAGCATAAA+AGG - chr8_1:1753024-1753043 None:intergenic 30.0%
! CCTTTTATGCTCAAATCTAA+AGG + chr8_1:1753021-1753040 Msa1171830:CDS 30.0%
! TGATGTTACTTGATTCTAAC+GGG - chr8_1:1753066-1753085 None:intergenic 30.0%
ATAAATAACCATCACTCTTG+TGG - chr8_1:1753111-1753130 None:intergenic 30.0%
CAAGAGTGATGGTTATTTAT+TGG + chr8_1:1753111-1753130 Msa1171830:CDS 30.0%
TTACCAAAATAACAAATGGG+AGG + chr8_1:1753141-1753160 Msa1171830:CDS 30.0%
TACCAAAATAACAAATGGGA+GGG + chr8_1:1753142-1753161 Msa1171830:CDS 30.0%
ATAATTCTCGCAAACGTAAA+CGG + chr8_1:1753269-1753288 Msa1171830:CDS 30.0%
AAAAAGATAACTAGCCATTC+AGG - chr8_1:1753568-1753587 None:intergenic 30.0%
CAGAATTAAGTGCATTGTAA+TGG - chr8_1:1753607-1753626 None:intergenic 30.0%
!! AGATTTTGGAAAGAAACCAA+TGG - chr8_1:1753657-1753676 None:intergenic 30.0%
! TTCTCACTTGTTGATAAAGA+TGG - chr8_1:1753984-1754003 None:intergenic 30.0%
!! GCACATTAATTGGTATTGAT+TGG - chr8_1:1754119-1754138 None:intergenic 30.0%
ACATAGATAGGCACATTAAT+TGG - chr8_1:1754129-1754148 None:intergenic 30.0%
ATTAATGTGCCTATCTATGT+TGG + chr8_1:1754129-1754148 Msa1171830:intron 30.0%
CAATATGAATCTCGATTCAT+TGG + chr8_1:1754162-1754181 Msa1171830:intron 30.0%
AATGTGAATCGTGTGATTTA+GGG - chr8_1:1754302-1754321 None:intergenic 30.0%
TAATGTGAATCGTGTGATTT+AGG - chr8_1:1754303-1754322 None:intergenic 30.0%
TGATTCAAACCTGGATTATT+TGG - chr8_1:1754429-1754448 None:intergenic 30.0%
CCAAGAAGAAGAAAAAAATG+GGG - chr8_1:1754491-1754510 None:intergenic 30.0%
GCCAAGAAGAAGAAAAAAAT+GGG - chr8_1:1754492-1754511 None:intergenic 30.0%
AGCCAAGAAGAAGAAAAAAA+TGG - chr8_1:1754493-1754512 None:intergenic 30.0%
ATCAGATTCAATTCACAATC+TGG + chr8_1:1754577-1754596 Msa1171830:intron 30.0%
TCAGATTCAATTCACAATCT+GGG + chr8_1:1754578-1754597 Msa1171830:intron 30.0%
TTGGAGTAAACTCAATAACA+TGG - chr8_1:1754647-1754666 None:intergenic 30.0%
TTAGAACTTAACTTAGAGTC+AGG + chr8_1:1754815-1754834 Msa1171830:intron 30.0%
TAGAACTTAACTTAGAGTCA+GGG + chr8_1:1754816-1754835 Msa1171830:intron 30.0%
AGAATCAAGTATGTATCACA+AGG + chr8_1:1754878-1754897 Msa1171830:intron 30.0%
AAAAGTTTATCTCTCTCTGA+GGG - chr8_1:1755104-1755123 None:intergenic 30.0%
TAAAAGTTTATCTCTCTCTG+AGG - chr8_1:1755105-1755124 None:intergenic 30.0%
ATTGACTACATGGAAAACAA+TGG + chr8_1:1755377-1755396 Msa1171830:intron 30.0%
CTATTCAATTACCGTCTATA+TGG + chr8_1:1755502-1755521 Msa1171830:intron 30.0%
!! CAGTAAAAGCATTAGTAAGA+AGG - chr8_1:1755534-1755553 None:intergenic 30.0%
! CTTCTTACTAATGCTTTTAC+TGG + chr8_1:1755532-1755551 Msa1171830:intron 30.0%
AATTGGTACAATCTTTCCTT+AGG - chr8_1:1755582-1755601 None:intergenic 30.0%
AACATCTATCATGCAGAAAT+TGG - chr8_1:1755599-1755618 None:intergenic 30.0%
! AAAGCATTAGGGAGAAAATT+GGG - chr8_1:1755625-1755644 None:intergenic 30.0%
!! CCTTAGAAATGAAAGCATTA+GGG - chr8_1:1755636-1755655 None:intergenic 30.0%
CCTAATGCTTTCATTTCTAA+GGG + chr8_1:1755634-1755653 Msa1171830:intron 30.0%
!! ATCAATTTTGCTATGCTTTG+TGG + chr8_1:1755668-1755687 Msa1171830:intron 30.0%
!! TGAAATCTGTTGTTTCAAAG+TGG + chr8_1:1755730-1755749 Msa1171830:intron 30.0%
ATTCAATGAAGAACCTATTG+AGG - chr8_1:1756067-1756086 None:intergenic 30.0%
!!! GGTTTTGAATCATCTTTAAC+AGG - chr8_1:1756668-1756687 None:intergenic 30.0%
AAATCCCCAATGATAAAACA+CGG - chr8_1:1756819-1756838 None:intergenic 30.0%
TCATTGGGGATTTGATAAAA+TGG + chr8_1:1756826-1756845 Msa1171830:CDS 30.0%
CATTGGGGATTTGATAAAAT+GGG + chr8_1:1756827-1756846 Msa1171830:CDS 30.0%
!! GTTCCAAAAAGACTTGTTTT+GGG - chr8_1:1756927-1756946 None:intergenic 30.0%
!! TGTTCCAAAAAGACTTGTTT+TGG - chr8_1:1756928-1756947 None:intergenic 30.0%
! GAAGTTGAATTTGGATCTTT+TGG + chr8_1:1757076-1757095 Msa1171830:CDS 30.0%
! CATTTTCTCAAACCTCAAAA+TGG - chr8_1:1757208-1757227 None:intergenic 30.0%
! TCCCTTTCACTAAGAAATTT+TGG + chr8_1:1757288-1757307 Msa1171830:intron 30.0%
CACCAAAATTTCTTAGTGAA+AGG - chr8_1:1757293-1757312 None:intergenic 30.0%
TTGTAAAATGGCAGTCTATT+GGG + chr8_1:1757455-1757474 Msa1171830:three_prime_UTR 30.0%
AGCACTAATGAAAACCAAAA+GGG - chr8_1:1757541-1757560 None:intergenic 30.0%
TAAAATCCCTATCTTCTCTC+GGG - chr8_1:1752032-1752051 None:intergenic 35.0%
!! ATTTATTTTCGCGCTGTGTT+AGG + chr8_1:1752080-1752099 Msa1171830:intron 35.0%
CTGAATTTCAATGCTGCAAA+TGG - chr8_1:1752156-1752175 None:intergenic 35.0%
ATAATTGATTGTGACGGTGT+TGG - chr8_1:1752191-1752210 None:intergenic 35.0%
GGTGACAACAATGAAATGAA+GGG - chr8_1:1752265-1752284 None:intergenic 35.0%
AGCTATAGGTCTTGATTATC+AGG + chr8_1:1752312-1752331 Msa1171830:five_prime_UTR 35.0%
TATCAGGTAAATCTGCCAAA+TGG + chr8_1:1752328-1752347 Msa1171830:five_prime_UTR 35.0%
! AGCCCTTTTGTATATGTTGA+TGG - chr8_1:1752463-1752482 None:intergenic 35.0%
CTCTACTACAATTCTCCTTT+AGG - chr8_1:1752697-1752716 None:intergenic 35.0%
CTAAAGGAGAATTGTAGTAG+AGG + chr8_1:1752695-1752714 Msa1171830:CDS 35.0%
TTCTTCCTTGTGAAGGAAAA+AGG + chr8_1:1752779-1752798 Msa1171830:CDS 35.0%
!! GGGTTTTAACCTTCATGTTT+TGG + chr8_1:1752856-1752875 Msa1171830:CDS 35.0%
!! ATCTGAGTGATTTTGAAGGT+TGG + chr8_1:1752906-1752925 Msa1171830:CDS 35.0%
GAAGAGAGGAGTTTGAAAAA+TGG + chr8_1:1752944-1752963 Msa1171830:CDS 35.0%
TTTGTTAACCACAAGAGTGA+TGG + chr8_1:1753100-1753119 Msa1171830:CDS 35.0%
! TATCATCACCGTCAACATTT+TGG - chr8_1:1753171-1753190 None:intergenic 35.0%
! TTGTGTGGAAATCTTTGAGA+AGG + chr8_1:1753243-1753262 Msa1171830:CDS 35.0%
TAATTCTCGCAAACGTAAAC+GGG + chr8_1:1753270-1753289 Msa1171830:CDS 35.0%
!!! ACTTTTTTGTTCAGTTGCTG+AGG + chr8_1:1753407-1753426 Msa1171830:CDS 35.0%
!!! CTTTTTTGTTCAGTTGCTGA+GGG + chr8_1:1753408-1753427 Msa1171830:CDS 35.0%
AATATGTACTCACAAGCCAT+TGG + chr8_1:1753638-1753657 Msa1171830:intron 35.0%
TTCTTATATATGAGACCGGA+TGG - chr8_1:1753841-1753860 None:intergenic 35.0%
! ACGTATCTGGTTTATAATGC+AGG - chr8_1:1753789-1753808 None:intergenic 35.0%
TTTCTTATATATGAGACCGG+AGG + chr8_1:1753840-1753859 Msa1171830:intron 35.0%
TTCTTATATATGAGACCGGA+GGG + chr8_1:1753841-1753860 Msa1171830:intron 35.0%
TAGAGTTGTAACTATGAGAG+CGG - chr8_1:1753908-1753927 None:intergenic 35.0%
!! TTTCTTTTGTTGAAGTGCCT+AGG - chr8_1:1753932-1753951 None:intergenic 35.0%
CATGTATTCTACTGAAAACC+AGG - chr8_1:1754061-1754080 None:intergenic 35.0%
AATCCCTATCCAACATAGAT+AGG - chr8_1:1754141-1754160 None:intergenic 35.0%
AATCTGAATCATGCAACTTC+GGG - chr8_1:1754212-1754231 None:intergenic 35.0%
GAATCTGAATCATGCAACTT+CGG - chr8_1:1754213-1754232 None:intergenic 35.0%
ATGTGAATCGTGTGATTTAG+GGG - chr8_1:1754301-1754320 None:intergenic 35.0%
TCACGTATTCCAAATAATCC+AGG + chr8_1:1754417-1754436 Msa1171830:intron 35.0%
TCTTCAATGTGATTCAAACC+TGG - chr8_1:1754438-1754457 None:intergenic 35.0%
AGAAGAAAAAAATGGGGAGA+CGG - chr8_1:1754485-1754504 None:intergenic 35.0%
!!! CCCCATTTTTTTCTTCTTCT+TGG + chr8_1:1754488-1754507 Msa1171830:intron 35.0%
CAATTCACAATCTGGGAAAT+AGG + chr8_1:1754585-1754604 Msa1171830:intron 35.0%
AAGTAGCCTTTACACTCATA+AGG + chr8_1:1754737-1754756 Msa1171830:intron 35.0%
GCTTTACCTTATGAGTGTAA+AGG - chr8_1:1754746-1754765 None:intergenic 35.0%
AGAACTTAACTTAGAGTCAG+GGG + chr8_1:1754817-1754836 Msa1171830:intron 35.0%
AAGTATGTATCACAAGGTGT+GGG + chr8_1:1754884-1754903 Msa1171830:intron 35.0%
! GTTTTCACTTGAACTTGTAC+AGG - chr8_1:1754914-1754933 None:intergenic 35.0%
TACAAGTTCAAGTGAAAACG+AGG + chr8_1:1754915-1754934 Msa1171830:intron 35.0%
ACAAGTTCAAGTGAAAACGA+GGG + chr8_1:1754916-1754935 Msa1171830:intron 35.0%
TACAAAAGTTAGGTAGAACC+TGG - chr8_1:1754978-1754997 None:intergenic 35.0%
GTCAACTGCAGTTCAATTTA+GGG - chr8_1:1755002-1755021 None:intergenic 35.0%
TAACATAACCAGAGAAGCAA+AGG - chr8_1:1755248-1755267 None:intergenic 35.0%
TCATATCATAAGGGTGGTAT+TGG - chr8_1:1755358-1755377 None:intergenic 35.0%
AGTCAATCATATCATAAGGG+TGG - chr8_1:1755364-1755383 None:intergenic 35.0%
GACGGTAATTGAATAGTTAG+AGG - chr8_1:1755498-1755517 None:intergenic 35.0%
ACACATGAAAAAACCACCTA+AGG + chr8_1:1755563-1755582 Msa1171830:intron 35.0%
AAGCATTAGGGAGAAAATTG+GGG - chr8_1:1755624-1755643 None:intergenic 35.0%
!! GAAAGCATTAGGGAGAAAAT+TGG - chr8_1:1755626-1755645 None:intergenic 35.0%
CCCTAATGCTTTCATTTCTA+AGG + chr8_1:1755633-1755652 Msa1171830:intron 35.0%
!! CCCTTAGAAATGAAAGCATT+AGG - chr8_1:1755637-1755656 None:intergenic 35.0%
GCTATGCTTTGTGGAAAATA+TGG + chr8_1:1755677-1755696 Msa1171830:intron 35.0%
GCATAGTCAACTTTCAATTC+TGG + chr8_1:1755757-1755776 Msa1171830:intron 35.0%
ATTGGTATAGCAGATGACAA+CGG - chr8_1:1755816-1755835 None:intergenic 35.0%
AGACGTTGCATTTACTAGAT+TGG - chr8_1:1755834-1755853 None:intergenic 35.0%
ATCTAGTAAATGCAACGTCT+AGG + chr8_1:1755834-1755853 Msa1171830:intron 35.0%
TCTAGTAAATGCAACGTCTA+GGG + chr8_1:1755835-1755854 Msa1171830:intron 35.0%
ATTGAGGATAGGGAATTACA+AGG - chr8_1:1756051-1756070 None:intergenic 35.0%
TGTAATTCCCTATCCTCAAT+AGG + chr8_1:1756051-1756070 Msa1171830:intron 35.0%
TGAAGAACCTATTGAGGATA+GGG - chr8_1:1756061-1756080 None:intergenic 35.0%
ATGAAGAACCTATTGAGGAT+AGG - chr8_1:1756062-1756081 None:intergenic 35.0%
ATCTCAATTTCACTGTACCT+TGG - chr8_1:1756280-1756299 None:intergenic 35.0%
TGCAATTCATGTTCTGGTAA+GGG + chr8_1:1756344-1756363 Msa1171830:CDS 35.0%
GGTAAGGGAAATAAATTGCA+CGG + chr8_1:1756359-1756378 Msa1171830:CDS 35.0%
! CTTTTCAGTAATATCTGGGT+TGG - chr8_1:1756507-1756526 None:intergenic 35.0%
CGAAAATCATCATCCATAGA+TGG - chr8_1:1756542-1756561 None:intergenic 35.0%
! TTTCTGAGAGTGACTCTAAA+TGG + chr8_1:1756624-1756643 Msa1171830:CDS 35.0%
GATTTCATATTGCTGAGAAC+AGG + chr8_1:1756768-1756787 Msa1171830:CDS 35.0%
! TGCATTCCGTGTTTTATCAT+TGG + chr8_1:1756810-1756829 Msa1171830:CDS 35.0%
! GCATTCCGTGTTTTATCATT+GGG + chr8_1:1756811-1756830 Msa1171830:CDS 35.0%
! CATTCCGTGTTTTATCATTG+GGG + chr8_1:1756812-1756831 Msa1171830:CDS 35.0%
AGAGATTTAAGGATGCAATG+AGG + chr8_1:1756888-1756907 Msa1171830:CDS 35.0%
!!! AAAAAGACTTGTTTTGGGAG+GGG - chr8_1:1756922-1756941 None:intergenic 35.0%
!!! CAAAAAGACTTGTTTTGGGA+GGG - chr8_1:1756923-1756942 None:intergenic 35.0%
! GATGATGACGAAGTTGAATT+TGG + chr8_1:1757067-1757086 Msa1171830:CDS 35.0%
! GAATTTGGATCTTTTGGTGA+TGG + chr8_1:1757082-1757101 Msa1171830:CDS 35.0%
!!! GATCTTTTGGTGATGGTTTT+GGG + chr8_1:1757089-1757108 Msa1171830:CDS 35.0%
AGCTATCAAGCATCCATATA+TGG + chr8_1:1757117-1757136 Msa1171830:CDS 35.0%
GGTTTGAGAAAATGTCTTCT+TGG + chr8_1:1757214-1757233 Msa1171830:intron 35.0%
TTTCTACTTTCTCCTTATGC+AGG + chr8_1:1757259-1757278 Msa1171830:intron 35.0%
! GATTTAGAACATGTCCATAG+TGG - chr8_1:1757385-1757404 None:intergenic 35.0%
GTTGTAAAATGGCAGTCTAT+TGG + chr8_1:1757454-1757473 Msa1171830:three_prime_UTR 35.0%
AAAGGGATAAAAGTTGAGGA+GGG - chr8_1:1757524-1757543 None:intergenic 35.0%
AAAAGGGATAAAAGTTGAGG+AGG - chr8_1:1757525-1757544 None:intergenic 35.0%
! TCCTCAACTTTTATCCCTTT+TGG + chr8_1:1757524-1757543 Msa1171830:three_prime_UTR 35.0%
ACCAAAAGGGATAAAAGTTG+AGG - chr8_1:1757528-1757547 None:intergenic 35.0%
CAGCACTAATGAAAACCAAA+AGG - chr8_1:1757542-1757561 None:intergenic 35.0%
!!! TCGTTTTTTCCTTCACCTTT+TGG + chr8_1:1757568-1757587 Msa1171830:three_prime_UTR 35.0%
CTGTAAAACTATCGTTCAGT+CGG + chr8_1:1757603-1757622 Msa1171830:three_prime_UTR 35.0%
CGGTGACAACAATGAAATGA+AGG - chr8_1:1752266-1752285 None:intergenic 40.0%
!! CATATACAAAAGGGCTAGCT+AGG + chr8_1:1752467-1752486 Msa1171830:five_prime_UTR 40.0%
GACGCTGAATTTCATGGAAA+CGG + chr8_1:1752593-1752612 Msa1171830:CDS 40.0%
GCGGTTGTATTGTTGAGTAT+CGG + chr8_1:1752615-1752634 Msa1171830:CDS 40.0%
CGGTTGTATTGTTGAGTATC+GGG + chr8_1:1752616-1752635 Msa1171830:CDS 40.0%
!! ATTGTAGTAGAGGCATTGTG+AGG + chr8_1:1752705-1752724 Msa1171830:CDS 40.0%
TCAACTGTTCTTCCTTGTGA+AGG + chr8_1:1752772-1752791 Msa1171830:CDS 40.0%
TTCCTTGTGAAGGAAAAAGG+TGG + chr8_1:1752782-1752801 Msa1171830:CDS 40.0%
TCCTTGTGAAGGAAAAAGGT+GGG + chr8_1:1752783-1752802 Msa1171830:CDS 40.0%
! TATGATGCGGTATCGAGAAA+AGG + chr8_1:1752806-1752825 Msa1171830:CDS 40.0%
! ATGATGCGGTATCGAGAAAA+GGG + chr8_1:1752807-1752826 Msa1171830:CDS 40.0%
TCAGCAAAACATTCGAAGAG+AGG + chr8_1:1752930-1752949 Msa1171830:CDS 40.0%
!!! CACCCTCCCATTTGTTATTT+TGG - chr8_1:1753147-1753166 None:intergenic 40.0%
GATGACGAAAAATTCGGCAA+TGG + chr8_1:1753196-1753215 Msa1171830:CDS 40.0%
! AAAATTCGGCAATGGTGTTG+AGG + chr8_1:1753204-1753223 Msa1171830:CDS 40.0%
CTCAAAGATTTCCACACAAG+AGG - chr8_1:1753242-1753261 None:intergenic 40.0%
TTATACTCCTTCCACCTTGA+TGG - chr8_1:1753376-1753395 None:intergenic 40.0%
! TCAAGGTGGAAGGAGTATAA+AGG + chr8_1:1753376-1753395 Msa1171830:CDS 40.0%
GCAACTGAACAAAAAAGTCC+TGG - chr8_1:1753405-1753424 None:intergenic 40.0%
TTCCATATCCTGAACCTGAA+TGG + chr8_1:1753551-1753570 Msa1171830:intron 40.0%
! ATAACTAGCCATTCAGGTTC+AGG - chr8_1:1753562-1753581 None:intergenic 40.0%
! CAGTTAGCAAGCTGAGATTT+TGG - chr8_1:1753671-1753690 None:intergenic 40.0%
CATAGTTACAACTCTAGCCT+AGG + chr8_1:1753912-1753931 Msa1171830:intron 40.0%
!! AGTGCAGTTACAGTTCTGAA+TGG - chr8_1:1754032-1754051 None:intergenic 40.0%
TGTGCCTATCTATGTTGGAT+AGG + chr8_1:1754134-1754153 Msa1171830:intron 40.0%
GTGCCTATCTATGTTGGATA+GGG + chr8_1:1754135-1754154 Msa1171830:intron 40.0%
ATCTGAATCATGCAACTTCG+GGG - chr8_1:1754211-1754230 None:intergenic 40.0%
TGTGAATCGTGTGATTTAGG+GGG - chr8_1:1754300-1754319 None:intergenic 40.0%
TTACAAACCAGTTTGCATGC+TGG - chr8_1:1754330-1754349 None:intergenic 40.0%
! ATGTAAAGGCACACTCTCTT+TGG - chr8_1:1754666-1754685 None:intergenic 40.0%
! GAGAGTGTGCCTTTACATAA+TGG + chr8_1:1754668-1754687 Msa1171830:intron 40.0%
GCAAACTCGCCATTATGTAA+AGG - chr8_1:1754680-1754699 None:intergenic 40.0%
ATCCTATCCTAATCCTGCAA+TGG + chr8_1:1754777-1754796 Msa1171830:intron 40.0%
TTAACTTAGAGTCAGGGGAA+TGG + chr8_1:1754822-1754841 Msa1171830:intron 40.0%
CAAGTATGTATCACAAGGTG+TGG + chr8_1:1754883-1754902 Msa1171830:intron 40.0%
GGTCAACTGCAGTTCAATTT+AGG - chr8_1:1755003-1755022 None:intergenic 40.0%
! GTTTTATGCCTTTGCTTCTC+TGG + chr8_1:1755237-1755256 Msa1171830:intron 40.0%
!! ATCATAAGGGTGGTATTGGT+GGG - chr8_1:1755354-1755373 None:intergenic 40.0%
! TATCATAAGGGTGGTATTGG+TGG - chr8_1:1755355-1755374 None:intergenic 40.0%
GAAGGTTAGACCCATATAGA+CGG - chr8_1:1755516-1755535 None:intergenic 40.0%
TGGTACAATCTTTCCTTAGG+TGG - chr8_1:1755579-1755598 None:intergenic 40.0%
CTAGTAAATGCAACGTCTAG+GGG + chr8_1:1755836-1755855 Msa1171830:intron 40.0%
TGACCATTCTGATATGCACT+GGG + chr8_1:1756009-1756028 Msa1171830:intron 40.0%
GCATATGTATGCTTTGCAGA+AGG + chr8_1:1756208-1756227 Msa1171830:intron 40.0%
AGCAACATGATCCTCATACA+TGG - chr8_1:1756249-1756268 None:intergenic 40.0%
CTTTGCTGCAATTCATGTTC+TGG + chr8_1:1756338-1756357 Msa1171830:CDS 40.0%
CTGCAATTCATGTTCTGGTA+AGG + chr8_1:1756343-1756362 Msa1171830:CDS 40.0%
ATTGCACGGTTCAGTCAATA+TGG + chr8_1:1756373-1756392 Msa1171830:CDS 40.0%
TTTCTCTTCTCAGTTGCATC+TGG - chr8_1:1756476-1756495 None:intergenic 40.0%
GAGAAAATCTGAGCCATCTA+TGG + chr8_1:1756526-1756545 Msa1171830:CDS 40.0%
!! CGTGAAAAGCTTGTTTCTGT+AGG + chr8_1:1756560-1756579 Msa1171830:CDS 40.0%
GAGAGTGACTCTAAATGGTT+AGG + chr8_1:1756629-1756648 Msa1171830:CDS 40.0%
AATGGTTAGGCACACAAGTA+TGG + chr8_1:1756642-1756661 Msa1171830:CDS 40.0%
ACAAGATCTGTTTCGGTAGT+AGG - chr8_1:1756689-1756708 None:intergenic 40.0%
ACTACCGAAACAGATCTTGT+TGG + chr8_1:1756689-1756708 Msa1171830:CDS 40.0%
CTACCGAAACAGATCTTGTT+GGG + chr8_1:1756690-1756709 Msa1171830:CDS 40.0%
TCTCCCAACAAGATCTGTTT+CGG - chr8_1:1756696-1756715 None:intergenic 40.0%
GGGATTTGATAAAATGGGTG+AGG + chr8_1:1756832-1756851 Msa1171830:CDS 40.0%
!!! CCAAAAAGACTTGTTTTGGG+AGG - chr8_1:1756924-1756943 None:intergenic 40.0%
! CCTCCCAAAACAAGTCTTTT+TGG + chr8_1:1756921-1756940 Msa1171830:CDS 40.0%
!!! GGATCTTTTGGTGATGGTTT+TGG + chr8_1:1757088-1757107 Msa1171830:CDS 40.0%
!!! TTTTGGTGATGGTTTTGGGA+GGG + chr8_1:1757093-1757112 Msa1171830:CDS 40.0%
! GCATCCATATATGGATTGCT+TGG + chr8_1:1757126-1757145 Msa1171830:CDS 40.0%
CACTCCAAGCAATCCATATA+TGG - chr8_1:1757133-1757152 None:intergenic 40.0%
!! AAGTGCGATAAGCCATTTTG+AGG + chr8_1:1757193-1757212 Msa1171830:three_prime_UTR 40.0%
AAGAAAGAACCAGCTAGAAG+AGG + chr8_1:1757331-1757350 Msa1171830:three_prime_UTR 40.0%
TGGAATTTGGAAAGCCACTA+TGG + chr8_1:1757368-1757387 Msa1171830:three_prime_UTR 40.0%
AAGGGATAAAAGTTGAGGAG+GGG - chr8_1:1757523-1757542 None:intergenic 40.0%
AAATGCTGTCCAAAAGGTGA+AGG - chr8_1:1757580-1757599 None:intergenic 40.0%
!! TCGGAGCACTTTCAAGTTTA+TGG + chr8_1:1757622-1757641 Msa1171830:three_prime_UTR 40.0%
AACAGAGAGTCAGACGTTCA+TGG + chr8_1:1752544-1752563 Msa1171830:exon 45.0%
AGTCAGACGTTCATGGCAAA+CGG + chr8_1:1752551-1752570 Msa1171830:exon 45.0%
ATTCAGCGTCTAGACGATCA+AGG - chr8_1:1752583-1752602 None:intergenic 45.0%
CGTCTAGACGCTGAATTTCA+TGG + chr8_1:1752587-1752606 Msa1171830:CDS 45.0%
GCTGAATTTCATGGAAACGG+CGG + chr8_1:1752596-1752615 Msa1171830:CDS 45.0%
! ACCCACCTTTTTCCTTCACA+AGG - chr8_1:1752787-1752806 None:intergenic 45.0%
GGAAAAAGGTGGGTATGATG+CGG + chr8_1:1752793-1752812 Msa1171830:CDS 45.0%
! GGTATCGAGAAAAGGGTTGT+GGG + chr8_1:1752814-1752833 Msa1171830:CDS 45.0%
TCACGGATGCCAAAACATGA+AGG - chr8_1:1752868-1752887 None:intergenic 45.0%
!! GAGGGTGTCCAAAATGTTGA+CGG + chr8_1:1753160-1753179 Msa1171830:CDS 45.0%
TTATCTAGCTGCCTCTTGTG+TGG + chr8_1:1753228-1753247 Msa1171830:CDS 45.0%
CGTAAACGGGAATCGATATC+AGG + chr8_1:1753283-1753302 Msa1171830:CDS 45.0%
ACGGGAATCGATATCAGGAA+TGG + chr8_1:1753288-1753307 Msa1171830:CDS 45.0%
CGATATCAGGAATGGTGAAC+TGG + chr8_1:1753296-1753315 Msa1171830:CDS 45.0%
!! CTTGATGGTTCTGGTAATGG+TGG - chr8_1:1753361-1753380 None:intergenic 45.0%
CACCATTACCAGAACCATCA+AGG + chr8_1:1753359-1753378 Msa1171830:CDS 45.0%
!! CACCTTGATGGTTCTGGTAA+TGG - chr8_1:1753364-1753383 None:intergenic 45.0%
CATTACCAGAACCATCAAGG+TGG + chr8_1:1753362-1753381 Msa1171830:CDS 45.0%
! AGGTGGAAGGAGTATAAAGG+AGG + chr8_1:1753379-1753398 Msa1171830:CDS 45.0%
TGTTCTGTCTGTGAGAAAGC+AGG + chr8_1:1753438-1753457 Msa1171830:CDS 45.0%
AGAAAGCAGGCTGAACCAAA+TGG + chr8_1:1753451-1753470 Msa1171830:CDS 45.0%
TGGGAAGATGATCCACCATT+TGG - chr8_1:1753469-1753488 None:intergenic 45.0%
!! AAATGGTGGATCATCTTCCC+AGG + chr8_1:1753468-1753487 Msa1171830:CDS 45.0%
! ATGGCATCGAGAGTATACCT+GGG - chr8_1:1753488-1753507 None:intergenic 45.0%
! TATGGCATCGAGAGTATACC+TGG - chr8_1:1753489-1753508 None:intergenic 45.0%
! AGCCATTCAGGTTCAGGATA+TGG - chr8_1:1753556-1753575 None:intergenic 45.0%
!! CTCAGCTTGCTAACTGCTAA+AGG + chr8_1:1753675-1753694 Msa1171830:intron 45.0%
CTACAGGAATGGGATAGCTT+TGG + chr8_1:1753865-1753884 Msa1171830:intron 45.0%
!! GAGCGGTCATTTTGTAGACT+GGG - chr8_1:1753891-1753910 None:intergenic 45.0%
!! AGAGCGGTCATTTTGTAGAC+TGG - chr8_1:1753892-1753911 None:intergenic 45.0%
TGTAACTGCACTATTGAGCC+TGG + chr8_1:1754040-1754059 Msa1171830:intron 45.0%
GCATGATTCAGATTCTGCTG+CGG + chr8_1:1754218-1754237 Msa1171830:intron 45.0%
CATGATTCAGATTCTGCTGC+GGG + chr8_1:1754219-1754238 Msa1171830:intron 45.0%
GTGAATCGTGTGATTTAGGG+GGG - chr8_1:1754299-1754318 None:intergenic 45.0%
TTATGCTCCAGCATGCAAAC+TGG + chr8_1:1754320-1754339 Msa1171830:intron 45.0%
TTTGCTCCCTTGTTAACTCG+TGG + chr8_1:1754695-1754714 Msa1171830:intron 45.0%
CACCATTGCAGGATTAGGAT+AGG - chr8_1:1754782-1754801 None:intergenic 45.0%
GTTCACACCATTGCAGGATT+AGG - chr8_1:1754787-1754806 None:intergenic 45.0%
CAAAAGGTTCACACCATTGC+AGG - chr8_1:1754793-1754812 None:intergenic 45.0%
TTAGAGTCAGGGGAATGGAA+GGG + chr8_1:1754827-1754846 Msa1171830:intron 45.0%
AGTGAAAACGAGGGCTGATT+TGG + chr8_1:1754925-1754944 Msa1171830:intron 45.0%
TTAGAGGTAAAGGGAGACCA+TGG - chr8_1:1755482-1755501 None:intergenic 45.0%
GACAACGGCATTATCATCAC+AGG - chr8_1:1755801-1755820 None:intergenic 45.0%
TCAAGCAACTTGACTCTGTG+AGG - chr8_1:1755892-1755911 None:intergenic 45.0%
GTGACCATTCTGATATGCAC+TGG + chr8_1:1756008-1756027 Msa1171830:intron 45.0%
TGACCCAGTGCATATCAGAA+TGG - chr8_1:1756015-1756034 None:intergenic 45.0%
ACATGATCCTCATACATGGC+AGG - chr8_1:1756245-1756264 None:intergenic 45.0%
CATGTTGCTCTTAGTCACCA+AGG + chr8_1:1756260-1756279 Msa1171830:CDS 45.0%
CAGCGAGATTTAACAGAGAC+AGG - chr8_1:1756317-1756336 None:intergenic 45.0%
GGAGTCAGAAATATGTCCTC+TGG + chr8_1:1756394-1756413 Msa1171830:CDS 45.0%
!!! TTGGCTGTTGTTTTCTCCAG+AGG - chr8_1:1756413-1756432 None:intergenic 45.0%
! TTCTTTTCAGTGACGACGTC+TGG - chr8_1:1756437-1756456 None:intergenic 45.0%
CTTCTCAGTTGCATCTGGTT+TGG - chr8_1:1756471-1756490 None:intergenic 45.0%
! TGTAGGTCACCTTTTCCAAG+CGG + chr8_1:1756577-1756596 Msa1171830:CDS 45.0%
GAAACTACACCAGTCCATTC+CGG - chr8_1:1756608-1756627 None:intergenic 45.0%
GAAACAGATCTTGTTGGGAG+AGG + chr8_1:1756695-1756714 Msa1171830:CDS 45.0%
AAGTGTAGCTGCAACGTTCA+AGG + chr8_1:1756728-1756747 Msa1171830:CDS 45.0%
GTGAGGAAGTTTCACTTCGA+TGG + chr8_1:1756849-1756868 Msa1171830:CDS 45.0%
TCATCGCTGTCAACAGTCTT+CGG - chr8_1:1757052-1757071 None:intergenic 45.0%
!!! CTTTTGGTGATGGTTTTGGG+AGG + chr8_1:1757092-1757111 Msa1171830:CDS 45.0%
AAGGGATGCATTCCTGCATA+AGG - chr8_1:1757274-1757293 None:intergenic 45.0%
! GTGGTTGATGCGTTGGAATT+TGG + chr8_1:1757355-1757374 Msa1171830:three_prime_UTR 45.0%
TCTATTGGGTGCTCCTTGAA+GGG + chr8_1:1757469-1757488 Msa1171830:three_prime_UTR 45.0%
AGGGATAAAAGTTGAGGAGG+GGG - chr8_1:1757522-1757541 None:intergenic 45.0%
CAGCACAAATGCTGTCCAAA+AGG - chr8_1:1757586-1757605 None:intergenic 45.0%
AAGCAGCCCGAGAGAAGATA+GGG + chr8_1:1752023-1752042 Msa1171830:intron 50.0%
GTCAGACGTTCATGGCAAAC+GGG + chr8_1:1752552-1752571 Msa1171830:exon 50.0%
! CGGTATCGAGAAAAGGGTTG+TGG + chr8_1:1752813-1752832 Msa1171830:CDS 50.0%
CAGGAATGGTGAACTGGACA+CGG + chr8_1:1753302-1753321 Msa1171830:CDS 50.0%
GGTGGAGCTACAGGATCAAA+CGG - chr8_1:1753343-1753362 None:intergenic 50.0%
!! TCTGGTAATGGTGGAGCTAC+AGG - chr8_1:1753352-1753371 None:intergenic 50.0%
ACCAGAACCATCAAGGTGGA+AGG + chr8_1:1753366-1753385 Msa1171830:CDS 50.0%
! TCCTTCCACCTTGATGGTTC+TGG - chr8_1:1753370-1753389 None:intergenic 50.0%
! GAAGGAGTATAAAGGAGGCC+AGG + chr8_1:1753384-1753403 Msa1171830:CDS 50.0%
TTGTTCAGTTGCTGAGGGCA+AGG + chr8_1:1753413-1753432 Msa1171830:CDS 50.0%
TGTTCAGTTGCTGAGGGCAA+GGG + chr8_1:1753414-1753433 Msa1171830:CDS 50.0%
AAGCAGGCTGAACCAAATGG+TGG + chr8_1:1753454-1753473 Msa1171830:CDS 50.0%
GCGCAACCTTGAAATGGACA+GGG + chr8_1:1754241-1754260 Msa1171830:intron 50.0%
ACAGGGTCGCCCAACTAAAA+CGG + chr8_1:1754258-1754277 Msa1171830:intron 50.0%
!!! CCCTGACAGCCGTTTTAGTT+GGG - chr8_1:1754270-1754289 None:intergenic 50.0%
CCCAACTAAAACGGCTGTCA+GGG + chr8_1:1754267-1754286 Msa1171830:intron 50.0%
!! ACCCTGACAGCCGTTTTAGT+TGG - chr8_1:1754271-1754290 None:intergenic 50.0%
CCGTGACCACGAGTTAACAA+GGG - chr8_1:1754704-1754723 None:intergenic 50.0%
CCCTTGTTAACTCGTGGTCA+CGG + chr8_1:1754701-1754720 Msa1171830:intron 50.0%
CCTTGTTAACTCGTGGTCAC+GGG + chr8_1:1754702-1754721 Msa1171830:intron 50.0%
CTTAGAGTCAGGGGAATGGA+AGG + chr8_1:1754826-1754845 Msa1171830:intron 50.0%
!! GTGGTATTGGTGGGTACACA+TGG - chr8_1:1755345-1755364 None:intergenic 50.0%
GATGCATCCTGCCATGTATG+AGG + chr8_1:1756235-1756254 Msa1171830:CDS 50.0%
TTCAGTGACGACGTCTGGTT+TGG - chr8_1:1756432-1756451 None:intergenic 50.0%
! CCTTTTCCAAGCGGAAGTTC+CGG + chr8_1:1756586-1756605 Msa1171830:CDS 50.0%
AGAACCAGCTAGAAGAGGAG+TGG + chr8_1:1757336-1757355 Msa1171830:three_prime_UTR 50.0%
TCAACCACTCCTCTTCTAGC+TGG - chr8_1:1757343-1757362 None:intergenic 50.0%
! AAGAGGAGTGGTTGATGCGT+TGG + chr8_1:1757348-1757367 Msa1171830:three_prime_UTR 50.0%
GTCTATTGGGTGCTCCTTGA+AGG + chr8_1:1757468-1757487 Msa1171830:three_prime_UTR 50.0%
ATAAAAGTTGAGGAGGGGGG+GGG - chr8_1:1757518-1757537 None:intergenic 50.0%
GATAAAAGTTGAGGAGGGGG+GGG - chr8_1:1757519-1757538 None:intergenic 50.0%
GGATAAAAGTTGAGGAGGGG+GGG - chr8_1:1757520-1757539 None:intergenic 50.0%
GGGATAAAAGTTGAGGAGGG+GGG - chr8_1:1757521-1757540 None:intergenic 50.0%
GAAGCAGCCCGAGAGAAGAT+AGG + chr8_1:1752022-1752041 Msa1171830:intron 55.0%
!! GTGACGGTGTTGGTACTAGC+TGG - chr8_1:1752181-1752200 None:intergenic 55.0%
! AGGCATTGTGAGGCCAATGC+CGG + chr8_1:1752715-1752734 Msa1171830:CDS 55.0%
TATGAGACCGGAGGGACTAC+AGG + chr8_1:1753849-1753868 Msa1171830:intron 55.0%
ACCGGAGGGACTACAGGAAT+GGG + chr8_1:1753855-1753874 Msa1171830:intron 55.0%
TCCCATTCCTGTAGTCCCTC+CGG - chr8_1:1753859-1753878 None:intergenic 55.0%
GGCGCAACCTTGAAATGGAC+AGG + chr8_1:1754240-1754259 Msa1171830:intron 55.0%
GCCCAACTAAAACGGCTGTC+AGG + chr8_1:1754266-1754285 Msa1171830:intron 55.0%
CCCGTGACCACGAGTTAACA+AGG - chr8_1:1754705-1754724 None:intergenic 55.0%
TGCAACGTCTAGGGGAAGAG+TGG + chr8_1:1755844-1755863 Msa1171830:intron 55.0%
CCGGAACTTCCGCTTGGAAA+AGG - chr8_1:1756589-1756608 None:intergenic 55.0%
TCCAAGCGGAAGTTCCGGAA+TGG + chr8_1:1756591-1756610 Msa1171830:CDS 55.0%
TCCATTCCGGAACTTCCGCT+TGG - chr8_1:1756595-1756614 None:intergenic 55.0%
CTTGTTGGGAGAGGAAGACG+AGG + chr8_1:1756704-1756723 Msa1171830:CDS 55.0%
CGCTAACTGTGCACCCTTCA+AGG - chr8_1:1757485-1757504 None:intergenic 55.0%
AGGCCAATGCCGGTGATGCT+CGG + chr8_1:1752725-1752744 Msa1171830:CDS 60.0%
TCTCCGAGCATCACCGGCAT+TGG - chr8_1:1752731-1752750 None:intergenic 60.0%
ATGCCGGTGATGCTCGGAGA+TGG + chr8_1:1752731-1752750 Msa1171830:CDS 60.0%
GGACCATCTCCGAGCATCAC+CGG - chr8_1:1752737-1752756 None:intergenic 60.0%
GACCGGAGGGACTACAGGAA+TGG + chr8_1:1753854-1753873 Msa1171830:intron 60.0%
CTGCGGGCGCAACCTTGAAA+TGG + chr8_1:1754235-1754254 Msa1171830:intron 60.0%
GGGCGACCCTGTCCATTTCA+AGG - chr8_1:1754250-1754269 None:intergenic 60.0%
GCGGAAGTTCCGGAATGGAC+TGG + chr8_1:1756596-1756615 Msa1171830:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 1751969 1757708 1751969 ID=Msa1171830;Name=Msa1171830
chr8_1 mRNA 1751969 1757708 1751969 ID=Msa1171830-mRNA-1;Parent=Msa1171830;Name=Msa1171830-mRNA-1;_AED=0.04;_eAED=0.04;_QI=447|1|1|1|0.33|0.25|4|416|628
chr8_1 exon 1751969 1752015 1751969 ID=Msa1171830-mRNA-1:exon:625;Parent=Msa1171830-mRNA-1
chr8_1 exon 1752163 1753489 1752163 ID=Msa1171830-mRNA-1:exon:626;Parent=Msa1171830-mRNA-1
chr8_1 exon 1756227 1757214 1756227 ID=Msa1171830-mRNA-1:exon:627;Parent=Msa1171830-mRNA-1
chr8_1 exon 1757321 1757708 1757321 ID=Msa1171830-mRNA-1:exon:628;Parent=Msa1171830-mRNA-1
chr8_1 five_prime_UTR 1751969 1752015 1751969 ID=Msa1171830-mRNA-1:five_prime_utr;Parent=Msa1171830-mRNA-1
chr8_1 five_prime_UTR 1752163 1752562 1752163 ID=Msa1171830-mRNA-1:five_prime_utr;Parent=Msa1171830-mRNA-1
chr8_1 CDS 1752563 1753489 1752563 ID=Msa1171830-mRNA-1:cds;Parent=Msa1171830-mRNA-1
chr8_1 CDS 1756227 1757186 1756227 ID=Msa1171830-mRNA-1:cds;Parent=Msa1171830-mRNA-1
chr8_1 three_prime_UTR 1757187 1757214 1757187 ID=Msa1171830-mRNA-1:three_prime_utr;Parent=Msa1171830-mRNA-1
chr8_1 three_prime_UTR 1757321 1757708 1757321 ID=Msa1171830-mRNA-1:three_prime_utr;Parent=Msa1171830-mRNA-1
Gene Sequence

>Msa1171830

ATGGCAAACGGGTCTTTCCTTGATCGTCTAGACGCTGAATTTCATGGAAACGGCGGTTGTATTGTTGAGTATCGGGCTGATCGTGACAAAGCTAAACAGAAATCTTTGTTTTGTCAAATTTTTTCGGTTTACCTAAAGGAGAATTGTAGTAGAGGCATTGTGAGGCCAATGCCGGTGATGCTCGGAGATGGTCCGTTGCTTGATTTATATCAACTGTTCTTCCTTGTGAAGGAAAAAGGTGGGTATGATGCGGTATCGAGAAAAGGGTTGTGGGATTCTGTGATAATTGAAATGGGTTTTAACCTTCATGTTTTGGCATCCGTGAAATTAGTTTATGAAAAATATCTGAGTGATTTTGAAGGTTGGCTCAGCAAAACATTCGAAGAGAGGAGTTTGAAAAATGGGAATCATGGGTATTTGAATTCATTGCCGATAGATCTAGAAAAAGAATTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAACGATGATGATTTTGTCCCGTTAGAATCAAGTAACATCATAAAGCGCATTGAATTTGTTAACCACAAGAGTGATGGTTATTTATTGGACACTAATTACCAAAATAACAAATGGGAGGGTGTCCAAAATGTTGACGGTGATGATATTGATGATGACGAAAAATTCGGCAATGGTGTTGAGGATTATCTAGCTGCCTCTTGTGTGGAAATCTTTGAGAAGGAATATAATTCTCGCAAACGTAAACGGGAATCGATATCAGGAATGGTGAACTGGACACGGCATATTGCAAAACATCCGTTTGATCCTGTAGCTCCACCATTACCAGAACCATCAAGGTGGAAGGAGTATAAAGGAGGCCAGGACTTTTTTGTTCAGTTGCTGAGGGCAAGGGATGTTCTGTCTGTGAGAAAGCAGGCTGAACCAAATGGTGGATCATCTTCCCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCATGTTGCTCTTAGTCACCAAGGTACAGTGAAATTGAGATATAGTGAAAGGCTTCCTGTCTCTGTTAAATCTCGCTGTCTTTGCTGCAATTCATGTTCTGGTAAGGGAAATAAATTGCACGGTTCAGTCAATATGGAGTCAGAAATATGTCCTCTGGAGAAAACAACAGCCAAACCAGACGTCGTCACTGAAAAGAAAAAATCAACTGCCAAACCAGATGCAACTGAGAAGAGAAAATCAACTGCCAACCCAGATATTACTGAAAAGAGAAAATCTGAGCCATCTATGGATGATGATTTTCGTGAAAAGCTTGTTTCTGTAGGTCACCTTTTCCAAGCGGAAGTTCCGGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGATTCAAAACCTACTACCGAAACAGATCTTGTTGGGAGAGGAAGACGAGGAAAGTGTAGCTGCAACGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGAGAACAGGATGAAGCTGAAGCTTGAATTGCATTCCGTGTTTTATCATTGGGGATTTGATAAAATGGGTGAGGAAGTTTCACTTCGATGGACAGCTGATGAAGAAAAGAGATTTAAGGATGCAATGAGGTTAAAATTCCCCTCCCAAAACAAGTCTTTTTGGAACAATCCATCCAGATACTTTCGAAACAAGGCAAGAAAAGACATGGTGAGCTATTACTTCAATGTATATCTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCGAAGACTGTTGACAGCGATGATGACGAAGTTGAATTTGGATCTTTTGGTGATGGTTTTGGGAGGGAAGCTATCAAGCATCCATATATGGATTGCTTGGAGTGTTCAGAGAACAAGCAATGCTTTGACTTTGAGTAG
Protein sequence

>Msa1171830

MANGSFLDRLDAEFHGNGGCIVEYRADRDKAKQKSLFCQIFSVYLKENCSRGIVRPMPVMLGDGPLLDLYQLFFLVKEKGGYDAVSRKGLWDSVIIEMGFNLHVLASVKLVYEKYLSDFEGWLSKTFEERSLKNGNHGYLNSLPIDLEKEFRSLLCSNLKDNDDDFVPLESSNIIKRIEFVNHKSDGYLLDTNYQNNKWEGVQNVDGDDIDDDEKFGNGVEDYLAASCVEIFEKEYNSRKRKRESISGMVNWTRHIAKHPFDPVAPPLPEPSRWKEYKGGQDFFVQLLRARDVLSVRKQAEPNGGSSSQKVKMHPAMYEDHVALSHQGTVKLRYSERLPVSVKSRCLCCNSCSGKGNKLHGSVNMESEICPLEKTTAKPDVVTEKKKSTAKPDATEKRKSTANPDITEKRKSEPSMDDDFREKLVSVGHLFQAEVPEWTGVVSESDSKWLGTQVWPVKDDSKPTTETDLVGRGRRGKCSCNVQGSVDCVRFHIAENRMKLKLELHSVFYHWGFDKMGEEVSLRWTADEEKRFKDAMRLKFPSQNKSFWNNPSRYFRNKARKDMVSYYFNVYLIQLRSYQNRVTPKTVDSDDDEVEFGSFGDGFGREAIKHPYMDCLECSENKQCFDFE*