AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322660 MtrunA17_Chr8g0355281 96.049 329 6 3 1 329 5 326 0.0 644
Msa1322660 MtrunA17_Chr6g0485711 45.528 246 114 4 74 304 180 420 6.68e-62 205
Msa1322660 MtrunA17_Chr4g0028911 29.744 195 131 4 77 269 16 206 1.87e-16 78.2
Msa1322660 MtrunA17_Chr4g0028921 29.744 195 131 4 77 269 16 206 6.62e-16 76.6
Msa1322660 MtrunA17_Chr3g0122901 29.310 232 140 9 77 297 80 298 3.17e-15 75.5
Msa1322660 MtrunA17_Chr4g0044131 28.634 227 150 5 78 304 14 228 3.53e-15 74.7
Msa1322660 MtrunA17_Chr7g0239451 29.082 196 129 5 78 272 22 208 4.00e-15 74.3
Msa1322660 MtrunA17_Chr3g0112171 28.261 184 125 5 72 254 15 192 4.83e-15 73.9
Msa1322660 MtrunA17_Chr7g0267011 28.272 191 128 3 78 268 14 195 1.12e-14 71.6
Msa1322660 MtrunA17_Chr7g0239511 29.064 203 128 7 72 270 16 206 2.02e-14 72.4
Msa1322660 MtrunA17_Chr7g0239501 29.268 205 133 6 72 274 16 210 5.77e-14 70.9
Msa1322660 MtrunA17_Chr4g0076931 31.658 199 124 8 77 272 11 200 2.72e-13 68.6
Msa1322660 MtrunA17_Chr3g0112151 28.261 230 144 9 72 295 86 300 4.98e-13 68.9
Msa1322660 MtrunA17_Chr6g0459261 26.667 210 145 4 61 269 14 215 6.24e-13 68.2
Msa1322660 MtrunA17_Chr4g0075531 27.461 193 127 6 78 269 13 193 1.22e-12 67.0
Msa1322660 MtrunA17_Chr4g0025971 28.824 170 115 2 78 247 20 183 2.09e-12 66.6
Msa1322660 MtrunA17_Chr3g0112141 27.723 202 130 6 72 269 17 206 2.35e-12 66.2
Msa1322660 MtrunA17_Chr7g0239491 29.902 204 117 9 78 272 21 207 5.21e-12 65.1
Msa1322660 MtrunA17_Chr1g0171831 26.500 200 136 5 77 269 19 214 6.53e-12 65.1
Msa1322660 MtrunA17_Chr6g0459281 26.222 225 155 5 61 282 2 218 1.22e-11 64.3
Msa1322660 MtrunA17_Chr6g0466681 31.624 117 77 1 46 162 41 154 1.34e-11 64.7
Msa1322660 MtrunA17_Chr7g0244061 31.313 198 120 7 78 271 35 220 1.36e-11 64.3
Msa1322660 MtrunA17_Chr7g0268591 26.804 194 132 4 78 271 39 222 3.23e-11 63.2
Msa1322660 MtrunA17_Chr3g0123251 25.943 212 138 9 78 283 57 255 3.24e-11 63.5
Msa1322660 MtrunA17_Chr3g0123201 32.919 161 100 7 78 233 49 206 3.49e-11 62.0
Msa1322660 MtrunA17_Chr4g0040371 26.020 196 130 4 78 271 25 207 3.87e-11 62.8
Msa1322660 MtrunA17_Chr7g0239481 27.094 203 136 7 72 272 15 207 4.91e-11 62.4
Msa1322660 MtrunA17_Chr4g0032141 24.335 263 173 8 45 292 23 274 8.14e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322660 AT5G04900.1 77.397 292 60 2 43 329 43 333 1.56e-169 475
Msa1322660 AT4G13250.1 45.122 246 115 4 74 304 161 401 1.87e-60 201
Msa1322660 AT4G13250.2 44.309 246 115 5 74 304 161 399 2.47e-57 193
Msa1322660 AT1G10310.1 32.524 206 125 6 69 272 12 205 4.47e-18 82.4
Msa1322660 AT5G65205.1 31.837 245 140 8 77 313 11 236 8.18e-17 79.7
Msa1322660 AT1G24360.1 31.818 198 117 7 77 269 79 263 2.15e-16 79.0
Msa1322660 AT5G10050.1 32.524 206 120 7 77 281 10 197 1.45e-15 76.3
Msa1322660 AT4G05530.1 28.421 190 125 5 78 267 15 193 8.27e-12 65.1
Msa1322660 AT5G50590.2 28.421 190 125 6 77 265 50 229 1.02e-11 64.7
Msa1322660 AT5G50690.2 28.421 190 125 6 77 265 50 229 1.02e-11 64.7
Msa1322660 AT5G50590.1 27.059 255 160 10 77 323 50 286 1.38e-11 64.7
Msa1322660 AT5G50690.1 27.059 255 160 10 77 323 50 286 1.38e-11 64.7
Msa1322660 AT3G47360.1 29.381 194 126 7 77 269 50 233 1.42e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACTTAACTGAAAATATT+TGG 0.084717 8_4:+29798037 None:intergenic
ACACTAATAAATACTATTAT+TGG 0.192675 8_4:-29797708 Msa1322660:three_prime_UTR
AAGAGCTTGAGAGAAGAATT+TGG 0.202687 8_4:-29803063 Msa1322660:CDS
AACTGAAATACATTGATATA+TGG 0.208099 8_4:-29802855 Msa1322660:CDS
ATCCGTAAATAGAAGAAAAT+TGG 0.226755 8_4:-29805005 None:intergenic
GGTTTCATTGATCTGTTGTT+AGG 0.239754 8_4:+29798099 None:intergenic
TTTCTTAGGTTTGCTGCATA+TGG 0.270591 8_4:-29801487 Msa1322660:intron
AACAATGTTGTGTTGAATTT+AGG 0.273358 8_4:+29804870 None:intergenic
AGCGGTAAGGCAACGGGTTT+TGG 0.279638 8_4:+29797755 None:intergenic
AGAGCTTGAGAGAAGAATTT+GGG 0.296966 8_4:-29803062 Msa1322660:CDS
TTACTTAACTGAAAATATTT+GGG 0.311967 8_4:+29798038 None:intergenic
CGGTTGTTATTGTTGGTGGT+GGG 0.320050 8_4:+29804834 None:intergenic
AACTGAAAATATTTGGGAAT+AGG 0.347590 8_4:+29798044 None:intergenic
GAAATTGCTAGATTATGTTT+TGG 0.357920 8_4:+29797639 None:intergenic
AAGATCTGTTGTAACCATTC+CGG 0.358289 8_4:+29798556 None:intergenic
TCATTTGACAAAGTCATTAC+AGG 0.364217 8_4:-29801443 Msa1322660:intron
TTAGGGATAGATCTAATGTT+TGG 0.372199 8_4:+29798117 None:intergenic
AGAGAAGCGGTTGTTATTGT+TGG 0.373814 8_4:+29804827 None:intergenic
AGATCTGTTGTAACCATTCC+GGG 0.381265 8_4:+29798557 None:intergenic
GCGGTTGTTATTGTTGGTGG+TGG 0.404524 8_4:+29804833 None:intergenic
TGTCATGGTTCACAATCTTT+CGG 0.414123 8_4:-29800571 Msa1322660:intron
CTTTCAAACCCGTGAGGAAC+CGG 0.418163 8_4:+29798067 None:intergenic
TTCGCAGGTTGCAGAATACT+TGG 0.425684 8_4:-29798142 Msa1322660:intron
ACTGAAATACATTGATATAT+GGG 0.428120 8_4:-29802854 Msa1322660:intron
AATTTAGGCAGACGAGAGAA+AGG 0.433236 8_4:+29804885 None:intergenic
CAATCAAACCTCCGAATAAC+GGG 0.434402 8_4:-29797779 Msa1322660:three_prime_UTR
TACCTTATGATTTAGGGATA+GGG 0.435637 8_4:-29803824 Msa1322660:intron
GTTGTTATTGTTGGTGGTGG+GGG 0.437412 8_4:+29804836 None:intergenic
ATCATACAGAGATTTGCATT+TGG 0.440755 8_4:-29797581 Msa1322660:three_prime_UTR
CCAGTAATCAAAACGTTGTA+AGG 0.443126 8_4:+29804720 None:intergenic
GTTTCATTGATCTGTTGTTA+GGG 0.444901 8_4:+29798100 None:intergenic
TTAGCAATCTTCATCATCAA+TGG 0.445740 8_4:-29804958 Msa1322660:exon
ATGAGAAAGGATGAAGAAGT+TGG 0.455217 8_4:+29804789 None:intergenic
GGTTGTTATTGTTGGTGGTG+GGG 0.457485 8_4:+29804835 None:intergenic
TTTAGGGATAGGGTATGCTT+TGG 0.462514 8_4:-29803814 Msa1322660:intron
TATCATGAATAGATATGATC+TGG 0.462591 8_4:-29797814 Msa1322660:three_prime_UTR
TGGCCAAGCGGTAAGGCAAC+GGG 0.465258 8_4:+29797749 None:intergenic
GAAGCGGTTGTTATTGTTGG+TGG 0.467786 8_4:+29804830 None:intergenic
GCGAAGGAATTTCTAAAAGC+AGG 0.468485 8_4:-29803792 Msa1322660:CDS
GTCTGGCGCCAATACAAAAC+AGG 0.469357 8_4:-29798528 Msa1322660:intron
ACAACAGATCTTCTCATGTC+TGG 0.474724 8_4:-29798545 Msa1322660:CDS
AAACCCGTTGCCTTACCGCT+TGG 0.477533 8_4:-29797752 Msa1322660:three_prime_UTR
TATTTAGGCAATAAAGATGA+TGG 0.480267 8_4:-29802007 Msa1322660:intron
GGTATTCATTTATAGATGAA+AGG 0.481392 8_4:-29803101 Msa1322660:intron
TATTTGTATTCAAATAGTAT+AGG 0.484356 8_4:-29797841 Msa1322660:three_prime_UTR
TCAATCAAACCTCCGAATAA+CGG 0.493089 8_4:-29797780 Msa1322660:three_prime_UTR
CTGTATGATAACAGAAAAGA+AGG 0.494093 8_4:+29797595 None:intergenic
GTGGCCAAGCGGTAAGGCAA+CGG 0.497525 8_4:+29797748 None:intergenic
AAAAGAAGAAAGCAATTGAA+AGG 0.512594 8_4:+29804932 None:intergenic
GTATTCATTTATAGATGAAA+GGG 0.523248 8_4:-29803100 Msa1322660:intron
TCATCTGATGCTTCAGCAAG+TGG 0.524655 8_4:+29802240 None:intergenic
ATTGACGGGGCAGGTTCAGA+TGG 0.528992 8_4:-29801952 Msa1322660:CDS
AGAGATTTGCATTTGGCGCA+AGG 0.529215 8_4:-29797574 Msa1322660:three_prime_UTR
TTGATTACTGGCTCAACCAA+AGG 0.533805 8_4:-29804708 Msa1322660:intron
CAATGAAACCGACATACATC+CGG 0.538906 8_4:-29798086 Msa1322660:CDS
TGGGGCGTGGCCAAGCGGTA+AGG 0.545215 8_4:+29797742 None:intergenic
GACATACATCCGGTTCCTCA+CGG 0.547192 8_4:-29798076 Msa1322660:CDS
TAGATATGATCTGGAACGGA+AGG 0.549421 8_4:-29797805 Msa1322660:three_prime_UTR
AAATATGACCTCCGCGAGGT+TGG 0.556067 8_4:+29801980 None:intergenic
AGAAGCTGTTATGATGAGAA+AGG 0.556465 8_4:+29804776 None:intergenic
ATGGTGTAGATCAATAATGC+TGG 0.558885 8_4:-29802285 Msa1322660:intron
CAGATGGAAGACCAACTCCC+AGG 0.564488 8_4:-29801936 Msa1322660:intron
TTTGGTGTTACAGCCCGGAA+TGG 0.571021 8_4:-29798570 Msa1322660:intron
ACATACATCCGGTTCCTCAC+GGG 0.571767 8_4:-29798075 Msa1322660:CDS
AAAACTTCGGACATATGCAC+AGG 0.586145 8_4:+29797683 None:intergenic
TAGTGAGAGAAAGAGAGAAG+CGG 0.586249 8_4:+29804814 None:intergenic
GTGGTTACAACAAACACACT+TGG 0.597765 8_4:-29802124 Msa1322660:CDS
CTTGGCTGAACCAGCCGAAG+TGG 0.599008 8_4:-29798416 Msa1322660:intron
AATTTGGGGAGCAGCATGTG+TGG 0.600569 8_4:-29803047 Msa1322660:CDS
TGAATAGATATGATCTGGAA+CGG 0.603870 8_4:-29797809 Msa1322660:three_prime_UTR
AACGTTGTAAGGAGGAAGCA+TGG 0.614243 8_4:+29804731 None:intergenic
GTAATCAAAACGTTGTAAGG+AGG 0.617451 8_4:+29804723 None:intergenic
GAGCTTGAGAGAAGAATTTG+GGG 0.620456 8_4:-29803061 Msa1322660:CDS
TTAGGCAATAAAGATGATGG+TGG 0.629231 8_4:-29802004 Msa1322660:intron
ATTTGGGGAGCAGCATGTGT+GGG 0.636962 8_4:-29803046 Msa1322660:intron
TAGGCAATAAAGATGATGGT+GGG 0.647346 8_4:-29802003 Msa1322660:CDS
GATAGGGTATGCTTTGGCGA+AGG 0.648888 8_4:-29803808 Msa1322660:CDS
ACTTGCTGAAGCATCAGATG+AGG 0.650746 8_4:-29802238 Msa1322660:CDS
GTGAGGAACCGGATGTATGT+CGG 0.655366 8_4:+29798078 None:intergenic
TGGAGCAACAAAGAGAAGTG+TGG 0.673454 8_4:-29801467 Msa1322660:CDS
CGCATGATATAAGAAAACTT+CGG 0.677836 8_4:+29797670 None:intergenic
ATTCTGTGGATGCAGTGAGG+TGG 0.684617 8_4:-29802143 Msa1322660:intron
ATGATGGTGGGCCAACCTCG+CGG 0.691592 8_4:-29801991 Msa1322660:CDS
GATTTGCATTTGGCGCAAGG+AGG 0.693001 8_4:-29797571 None:intergenic
ATGGTGGGCCAACCTCGCGG+AGG 0.726382 8_4:-29801988 Msa1322660:CDS
CTTGATGATATGCTGTCGAG+AGG 0.741135 8_4:-29802101 Msa1322660:intron
AATAGGCTTTCAAACCCGTG+AGG 0.759601 8_4:+29798061 None:intergenic
TTGAAAATATGACCTCCGCG+AGG 0.783707 8_4:+29801976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACCTATTTTTTTATAGTTT+AGG - chr8_4:29799118-29799137 Msa1322660:intron 15.0%
!!! ACCTATTTTTTTATAGTTTA+GGG - chr8_4:29799119-29799138 Msa1322660:intron 15.0%
!!! AATGAAAACAAATATGATTT+TGG - chr8_4:29799210-29799229 Msa1322660:intron 15.0%
!! TGCAAAATAAAAATTTCAAT+GGG + chr8_4:29799757-29799776 None:intergenic 15.0%
!! ATGCAAAATAAAAATTTCAA+TGG + chr8_4:29799758-29799777 None:intergenic 15.0%
!! AATGTAAAAAATGACATTTA+GGG + chr8_4:29800380-29800399 None:intergenic 15.0%
!! AAATGTAAAAAATGACATTT+AGG + chr8_4:29800381-29800400 None:intergenic 15.0%
!! TATTAAAATTCTTAATTCTG+TGG - chr8_4:29800406-29800425 Msa1322660:intron 15.0%
!!! GAAAAAAGATATATTTTTGT+CGG + chr8_4:29801439-29801458 None:intergenic 15.0%
!!! TTTAATTTTTGATTCACATA+TGG - chr8_4:29801864-29801883 Msa1322660:intron 15.0%
!!! CTTTCTTTGTTTTATAAATT+CGG - chr8_4:29802447-29802466 Msa1322660:intron 15.0%
!! TATTTATTAAAGGGAAATAT+TGG - chr8_4:29802483-29802502 Msa1322660:intron 15.0%
!! TGACAAATTAAAGTTAATAA+TGG + chr8_4:29803538-29803557 None:intergenic 15.0%
!!! TTTAAAAAATCAAACTTTTC+TGG + chr8_4:29803763-29803782 None:intergenic 15.0%
!!! ATGGTTTTCTTATTTATTTA+TGG - chr8_4:29803797-29803816 Msa1322660:CDS 15.0%
!! TTACTTAACTGAAAATATTT+GGG + chr8_4:29804528-29804547 None:intergenic 15.0%
!! TTTACTTAACTGAAAATATT+TGG + chr8_4:29804529-29804548 None:intergenic 15.0%
!!! ATTTCTTTAAGAAAAAGAAA+AGG - chr8_4:29804679-29804698 Msa1322660:intron 15.0%
!!! AAGAAAAGGTAATTTTTATT+CGG - chr8_4:29804693-29804712 Msa1322660:intron 15.0%
!! TATTTGTATTCAAATAGTAT+AGG - chr8_4:29804722-29804741 Msa1322660:CDS 15.0%
!! ACACTAATAAATACTATTAT+TGG - chr8_4:29804855-29804874 Msa1322660:CDS 15.0%
!! TTTAATAAGTGTCAAGTTAA+TGG - chr8_4:29797963-29797982 Msa1322660:three_prime_UTR 20.0%
!! GCTTAAATATTTGCATAATT+TGG + chr8_4:29798012-29798031 None:intergenic 20.0%
!!! TCAACTTAAGAATGAATTTT+GGG + chr8_4:29798226-29798245 None:intergenic 20.0%
!!! TTCAACTTAAGAATGAATTT+TGG + chr8_4:29798227-29798246 None:intergenic 20.0%
!! TCATATTTACCTTATGATTT+AGG - chr8_4:29798732-29798751 Msa1322660:intron 20.0%
!! CATATTTACCTTATGATTTA+GGG - chr8_4:29798733-29798752 Msa1322660:intron 20.0%
!! ATGAATTATTTGGATAGTTT+AGG + chr8_4:29799009-29799028 None:intergenic 20.0%
!! TCCAAATAATTCATTTGTTT+AGG - chr8_4:29799015-29799034 Msa1322660:intron 20.0%
!! TCCTAAACAAATGAATTATT+TGG + chr8_4:29799019-29799038 None:intergenic 20.0%
!!! ATTCATTTGTTTAGGATATT+CGG - chr8_4:29799023-29799042 Msa1322660:intron 20.0%
!! AATTTACTTCCTAAAGTATA+TGG + chr8_4:29799073-29799092 None:intergenic 20.0%
!! TCCCTAAACTATAAAAAAAT+AGG + chr8_4:29799123-29799142 None:intergenic 20.0%
!!! TTTTCTTTCTATTGAAGTTA+TGG - chr8_4:29799164-29799183 Msa1322660:intron 20.0%
!! TTTCTTTCTATTGAAGTTAT+GGG - chr8_4:29799165-29799184 Msa1322660:intron 20.0%
!!! TTATGGGTTTTAGAAAAAAA+AGG - chr8_4:29799181-29799200 Msa1322660:intron 20.0%
!!! TATGGGTTTTAGAAAAAAAA+GGG - chr8_4:29799182-29799201 Msa1322660:intron 20.0%
!! ATAATGATTTGATACTAACT+TGG - chr8_4:29799246-29799265 Msa1322660:intron 20.0%
!! GTATTCCTATATATAATGAT+TGG + chr8_4:29799288-29799307 None:intergenic 20.0%
!!! TTTTTTTTCTCTATATACCT+TGG - chr8_4:29799441-29799460 Msa1322660:intron 20.0%
!! GTATTCATTTATAGATGAAA+GGG - chr8_4:29799463-29799482 Msa1322660:intron 20.0%
!! AACTGAAATACATTGATATA+TGG - chr8_4:29799708-29799727 Msa1322660:intron 20.0%
!! ACTGAAATACATTGATATAT+GGG - chr8_4:29799709-29799728 Msa1322660:intron 20.0%
!! ATATCATTGTTGTCAATTAT+TGG - chr8_4:29800001-29800020 Msa1322660:intron 20.0%
!! AAACACGTTCAATAAAATTA+GGG + chr8_4:29800210-29800229 None:intergenic 20.0%
!!! TTACTAATTCTTTTCTTTCT+CGG - chr8_4:29800243-29800262 Msa1322660:intron 20.0%
!! AAAATATATTCTCATGTAAG+AGG - chr8_4:29800486-29800505 Msa1322660:intron 20.0%
!! TACTACATAATTAGTTGATT+GGG - chr8_4:29800671-29800690 Msa1322660:intron 20.0%
!! TTTATCTGTTATTGTCTTAT+AGG - chr8_4:29800729-29800748 Msa1322660:intron 20.0%
!! ACTATATATTGCAACTTTAT+CGG - chr8_4:29801010-29801029 Msa1322660:intron 20.0%
!! AATATATGCAAATTAGGAAA+CGG + chr8_4:29801182-29801201 None:intergenic 20.0%
!! TACATGAATATATGCAAATT+AGG + chr8_4:29801188-29801207 None:intergenic 20.0%
!! GATAAACCTAATCAATAATT+AGG - chr8_4:29801694-29801713 Msa1322660:intron 20.0%
!! GTTTACAAGATACTTAAAAT+TGG + chr8_4:29801911-29801930 None:intergenic 20.0%
!!! ATAGAAGTTTTATTCATCAA+AGG + chr8_4:29802037-29802056 None:intergenic 20.0%
!! TTGTAATTAAAAGTGAAAAC+AGG + chr8_4:29802405-29802424 None:intergenic 20.0%
!!! TGTTTTCACTTTTAATTACA+AGG - chr8_4:29802404-29802423 Msa1322660:intron 20.0%
!! CAAAGAAAGAAATTGAAATA+AGG + chr8_4:29802436-29802455 None:intergenic 20.0%
!!! TTTGTTTTATAAATTCGGAA+GGG - chr8_4:29802452-29802471 Msa1322660:intron 20.0%
!! GGAAGCTATTATTTATTAAA+GGG - chr8_4:29802474-29802493 Msa1322660:intron 20.0%
!!! AAAGATTTGTTTTCATTCAT+GGG + chr8_4:29802590-29802609 None:intergenic 20.0%
!!! ATAAGAGAAGAATCTTTTTT+AGG + chr8_4:29802926-29802945 None:intergenic 20.0%
!! AAGATTCTTCTCTTATATTT+AGG - chr8_4:29802930-29802949 Msa1322660:intron 20.0%
!! TGAGTGATTTAATTCTTAAA+AGG - chr8_4:29803627-29803646 Msa1322660:intron 20.0%
!! TTTAATTCTTAAAAGGAGAA+AGG - chr8_4:29803634-29803653 Msa1322660:intron 20.0%
!!! AAAGTTTTTCATTAATGTCT+TGG - chr8_4:29804129-29804148 Msa1322660:intron 20.0%
! AAAAGAAGAAAGCAATTGAA+AGG + chr8_4:29797634-29797653 None:intergenic 25.0%
! AACAATGTTGTGTTGAATTT+AGG + chr8_4:29797696-29797715 None:intergenic 25.0%
! CAAAAATAAGTCAATCCAAA+CGG - chr8_4:29798165-29798184 Msa1322660:intron 25.0%
! AAAAATAAGTCAATCCAAAC+GGG - chr8_4:29798166-29798185 Msa1322660:intron 25.0%
!!! TTCATTCTTAAGTTGAAGAA+TGG - chr8_4:29798230-29798249 Msa1322660:intron 25.0%
! TAAAGTACAATCAATTCTGA+AGG + chr8_4:29798297-29798316 None:intergenic 25.0%
! AGACTTAGAAAAACTATAAG+AGG - chr8_4:29798549-29798568 Msa1322660:CDS 25.0%
! AAGCACCAATCATTATATAT+AGG - chr8_4:29799280-29799299 Msa1322660:intron 25.0%
!! AAAAGAAAGCATAAATCAGA+GGG + chr8_4:29799350-29799369 None:intergenic 25.0%
! GAGAAAAAAAAACAAAGTCA+TGG + chr8_4:29799432-29799451 None:intergenic 25.0%
! TCATCTATAAATGAATACCA+AGG + chr8_4:29799461-29799480 None:intergenic 25.0%
! GGTATTCATTTATAGATGAA+AGG - chr8_4:29799462-29799481 Msa1322660:intron 25.0%
! GTGTTATATTTATCGTAGAT+GGG + chr8_4:29799575-29799594 None:intergenic 25.0%
!! ACTTTTTGTGTGGATTTAAT+TGG - chr8_4:29799790-29799809 Msa1322660:intron 25.0%
! TGATGATCTTATCAAAATTC+TGG - chr8_4:29799853-29799872 Msa1322660:intron 25.0%
!!! ATAGCTTTGTATTATCAATG+CGG + chr8_4:29800163-29800182 None:intergenic 25.0%
! AGTCGAAACAAATGAAATAT+TGG + chr8_4:29800187-29800206 None:intergenic 25.0%
! CAAACACGTTCAATAAAATT+AGG + chr8_4:29800211-29800230 None:intergenic 25.0%
!! TGGATGTTTAGTTTCTATTT+AGG - chr8_4:29800541-29800560 Msa1322660:intron 25.0%
! TATTTAGGCAATAAAGATGA+TGG - chr8_4:29800556-29800575 Msa1322660:intron 25.0%
!! GGTCATATTTTCAATATTGA+CGG - chr8_4:29800596-29800615 Msa1322660:CDS 25.0%
!! GTCATATTTTCAATATTGAC+GGG - chr8_4:29800597-29800616 Msa1322660:CDS 25.0%
!! TCATATTTTCAATATTGACG+GGG - chr8_4:29800598-29800617 Msa1322660:CDS 25.0%
!!! AATAAAGTCAAAAAGTACCT+GGG + chr8_4:29800647-29800666 None:intergenic 25.0%
! CTACTACATAATTAGTTGAT+TGG - chr8_4:29800670-29800689 Msa1322660:intron 25.0%
! TTAGTATGGCATGTTTAATT+TGG + chr8_4:29800762-29800781 None:intergenic 25.0%
! AAAATGCGAGTTAAATCATT+TGG + chr8_4:29800834-29800853 None:intergenic 25.0%
! GAATAAAGAACTAATGATCT+TGG + chr8_4:29800866-29800885 None:intergenic 25.0%
!! TTGTATTGAAAGGTAGATTT+TGG - chr8_4:29800958-29800977 Msa1322660:intron 25.0%
! GCAATATATAGTGAAATCTA+AGG + chr8_4:29801002-29801021 None:intergenic 25.0%
! TTTGTATATGCAGATTTGAT+TGG + chr8_4:29801218-29801237 None:intergenic 25.0%
!! GAAATCTCAACAAATCTTTT+TGG - chr8_4:29801256-29801275 Msa1322660:intron 25.0%
! TTAGAGAATGACAACAATAA+AGG + chr8_4:29801461-29801480 None:intergenic 25.0%
! CATTCTCTAAATGTAATTCT+AGG - chr8_4:29801471-29801490 Msa1322660:CDS 25.0%
! TCTCCAATGAGAAAATTATA+TGG + chr8_4:29801637-29801656 None:intergenic 25.0%
!! CTCAATCCTAATTATTGATT+AGG + chr8_4:29801703-29801722 None:intergenic 25.0%
! ATACTATTGAAGAAACTGTA+TGG + chr8_4:29801763-29801782 None:intergenic 25.0%
! GATGCAAAGAATTAGTAATT+TGG - chr8_4:29802114-29802133 Msa1322660:CDS 25.0%
! ACATCATTATTTCACCTAAT+TGG + chr8_4:29802337-29802356 None:intergenic 25.0%
! AGAAAGAAATTGAAATAAGG+TGG + chr8_4:29802433-29802452 None:intergenic 25.0%
!!! CTTTGTTTTATAAATTCGGA+AGG - chr8_4:29802451-29802470 Msa1322660:intron 25.0%
!!! TTGTTTTATAAATTCGGAAG+GGG - chr8_4:29802453-29802472 Msa1322660:intron 25.0%
! GGGAAGCTATTATTTATTAA+AGG - chr8_4:29802473-29802492 Msa1322660:intron 25.0%
!!! AAGATTTGTTTTCATTCATG+GGG + chr8_4:29802589-29802608 None:intergenic 25.0%
!!! CAAAGATTTGTTTTCATTCA+TGG + chr8_4:29802591-29802610 None:intergenic 25.0%
! CATGAATGAAAACAAATCTT+TGG - chr8_4:29802589-29802608 Msa1322660:intron 25.0%
! CTAAAAGTTTCTCAACATAA+GGG + chr8_4:29802708-29802727 None:intergenic 25.0%
! ACTAAAAGTTTCTCAACATA+AGG + chr8_4:29802709-29802728 None:intergenic 25.0%
!!! ATCATTGGTTTTTCAATCAA+CGG + chr8_4:29802790-29802809 None:intergenic 25.0%
!! TCTTCTCTTATATTTAAGAC+CGG + chr8_4:29802827-29802846 None:intergenic 25.0%
!!! ATATTTTGGTCAGAAGTATT+AGG + chr8_4:29803102-29803121 None:intergenic 25.0%
! GAAATAGTTGGATTATTTAG+TGG - chr8_4:29803201-29803220 Msa1322660:intron 25.0%
!! CAGTACAAAATTGAAGTATT+AGG + chr8_4:29803239-29803258 None:intergenic 25.0%
!! CTAATACTTCAATTTTGTAC+TGG - chr8_4:29803237-29803256 Msa1322660:intron 25.0%
! ATGATAAAGTACACATGAAT+TGG - chr8_4:29803484-29803503 Msa1322660:intron 25.0%
!!! TAACTTTAATTTGTCATGCA+AGG - chr8_4:29803542-29803561 Msa1322660:intron 25.0%
!! TCTTAAGTCATGTTTTCTTA+AGG + chr8_4:29803865-29803884 None:intergenic 25.0%
! ATGACTTAAGAATAAACATC+AGG - chr8_4:29803874-29803893 Msa1322660:intron 25.0%
!! CATATTTACCTGTTTTGTAT+TGG + chr8_4:29804046-29804065 None:intergenic 25.0%
! TTCATGAAAATAAACTCAAG+TGG - chr8_4:29804261-29804280 Msa1322660:intron 25.0%
! AATAAACTCAAGTGGAAAAA+TGG - chr8_4:29804269-29804288 Msa1322660:intron 25.0%
!! ACCTCACTTCAAATATTTTA+CGG + chr8_4:29804309-29804328 None:intergenic 25.0%
! AACTGAAAATATTTGGGAAT+AGG + chr8_4:29804522-29804541 None:intergenic 25.0%
! TATCATGAATAGATATGATC+TGG - chr8_4:29804749-29804768 Msa1322660:CDS 25.0%
! ATTAGTGTCAAGTCAAAAAT+GGG + chr8_4:29804843-29804862 None:intergenic 25.0%
! TATTAGTGTCAAGTCAAAAA+TGG + chr8_4:29804844-29804863 None:intergenic 25.0%
!! GAAATTGCTAGATTATGTTT+TGG + chr8_4:29804927-29804946 None:intergenic 25.0%
TTAGCAATCTTCATCATCAA+TGG - chr8_4:29797605-29797624 Msa1322660:three_prime_UTR 30.0%
TTCAACAAAGAAAAGACCTT+TGG + chr8_4:29797874-29797893 None:intergenic 30.0%
! TCATGAAGATACAATTTTCG+TGG - chr8_4:29798081-29798100 Msa1322660:CDS 30.0%
! CATGAAGATACAATTTTCGT+GGG - chr8_4:29798082-29798101 Msa1322660:CDS 30.0%
! AGAATGGATTTAGACATGAT+TGG - chr8_4:29798246-29798265 Msa1322660:intron 30.0%
AAGGTAAAATGCTTTGTGTT+TGG + chr8_4:29798399-29798418 None:intergenic 30.0%
TTACCTTATGATTTAGGGAT+AGG - chr8_4:29798738-29798757 Msa1322660:intron 30.0%
TACCTTATGATTTAGGGATA+GGG - chr8_4:29798739-29798758 Msa1322660:intron 30.0%
! CAAATTGATGGTTTATCCAA+AGG + chr8_4:29798983-29799002 None:intergenic 30.0%
CTTTGGATAAACCATCAATT+TGG - chr8_4:29798981-29799000 Msa1322660:intron 30.0%
TAGTTTAGGAACCAAATTGA+TGG + chr8_4:29798995-29799014 None:intergenic 30.0%
TTCCTAAAGTATATGGAAAC+GGG + chr8_4:29799066-29799085 None:intergenic 30.0%
CTTCCTAAAGTATATGGAAA+CGG + chr8_4:29799067-29799086 None:intergenic 30.0%
TGAGACAAACAATAACACAA+AGG + chr8_4:29799324-29799343 None:intergenic 30.0%
! AAAGAAAGCATAAATCAGAG+GGG + chr8_4:29799349-29799368 None:intergenic 30.0%
! GAAAAGAAAGCATAAATCAG+AGG + chr8_4:29799351-29799370 None:intergenic 30.0%
TACTAAGATAGAAGTTCAAG+AGG + chr8_4:29799548-29799567 None:intergenic 30.0%
CGTGTTATATTTATCGTAGA+TGG + chr8_4:29799576-29799595 None:intergenic 30.0%
!! TTCACATTTTGTTTCTTGCA+GGG - chr8_4:29799623-29799642 Msa1322660:intron 30.0%
ACTACATGTGATGTGAAAAA+TGG - chr8_4:29799647-29799666 Msa1322660:intron 30.0%
! ATACGTAGAAACTTTTTGTG+TGG - chr8_4:29799780-29799799 Msa1322660:intron 30.0%
TAAACAGTCGAAGAATTGAA+GGG + chr8_4:29799958-29799977 None:intergenic 30.0%
ATAAACAGTCGAAGAATTGA+AGG + chr8_4:29799959-29799978 None:intergenic 30.0%
! CGCTTAGAATGATGAATTTT+TGG - chr8_4:29800116-29800135 Msa1322660:intron 30.0%
!! CAATAAAGTCAAAAAGTACC+TGG + chr8_4:29800648-29800667 None:intergenic 30.0%
! AACAATCAAAAAGCATAACC+AGG + chr8_4:29800705-29800724 None:intergenic 30.0%
CAACAAAAGACGATTTAGTA+TGG + chr8_4:29800776-29800795 None:intergenic 30.0%
! ATCGTCTTTTGTTGATCATT+TGG - chr8_4:29800782-29800801 Msa1322660:intron 30.0%
!!! CCTATGAGTTGGTATTTTAT+GGG - chr8_4:29800927-29800946 Msa1322660:intron 30.0%
! TTGATTTCTACCCTTTTCTT+AGG - chr8_4:29801062-29801081 Msa1322660:intron 30.0%
TCATTTGACAAAGTCATTAC+AGG - chr8_4:29801120-29801139 Msa1322660:intron 30.0%
CTGCATATACAAATATGAGA+AGG - chr8_4:29801225-29801244 Msa1322660:intron 30.0%
CAAATATGAGAAGGAAGTTA+CGG - chr8_4:29801234-29801253 Msa1322660:intron 30.0%
TCTCAATTATATCACAGGTA+GGG + chr8_4:29801340-29801359 None:intergenic 30.0%
TGATGTCTCAATTATATCAC+AGG + chr8_4:29801345-29801364 None:intergenic 30.0%
! GAGGTTTTTGAACTAGTATA+TGG - chr8_4:29801392-29801411 Msa1322660:intron 30.0%
AAATGTAATTCTAGGTGTTC+TGG - chr8_4:29801479-29801498 Msa1322660:CDS 30.0%
AATGTAATTCTAGGTGTTCT+GGG - chr8_4:29801480-29801499 Msa1322660:CDS 30.0%
! TCTAGTTACATTGACTATTC+AGG + chr8_4:29801531-29801550 None:intergenic 30.0%
! TGGCCATATAATTTTCTCAT+TGG - chr8_4:29801631-29801650 Msa1322660:intron 30.0%
!! AGGAATTACTTTTCCTTTTG+TGG + chr8_4:29801798-29801817 None:intergenic 30.0%
GCAAGATGTTAAAAATGTCA+TGG - chr8_4:29801977-29801996 Msa1322660:CDS 30.0%
ATTCCAGTCCTTATTAAGTA+CGG - chr8_4:29802160-29802179 Msa1322660:intron 30.0%
ATCTAACACCGTACTTAATA+AGG + chr8_4:29802171-29802190 None:intergenic 30.0%
GAATATGTTCGTTACAAGTT+TGG + chr8_4:29802240-29802259 None:intergenic 30.0%
TTCTGAATGAACTTTAGTGA+AGG - chr8_4:29802257-29802276 Msa1322660:CDS 30.0%
ATCATCATGCTTATCCAATT+AGG - chr8_4:29802320-29802339 Msa1322660:intron 30.0%
TCCTGTTTGGTATCATAATA+TGG - chr8_4:29802365-29802384 Msa1322660:intron 30.0%
ACCATATTATGATACCAAAC+AGG + chr8_4:29802369-29802388 None:intergenic 30.0%
GTTGATCTATATTAAAGCGT+TGG - chr8_4:29802743-29802762 Msa1322660:intron 30.0%
! TCTTCTCTTATATTTAGGAC+CGG - chr8_4:29802935-29802954 Msa1322660:intron 30.0%
ACCAAAATATACTGATCTAG+TGG - chr8_4:29803112-29803131 Msa1322660:intron 30.0%
! TCCACTAGATCAGTATATTT+TGG + chr8_4:29803116-29803135 None:intergenic 30.0%
!! TTTTGAATTGATTCACCATG+TGG - chr8_4:29803271-29803290 Msa1322660:intron 30.0%
AAAACCACTTTATCGTTCAA+GGG + chr8_4:29803396-29803415 None:intergenic 30.0%
AAAGGCTTGAAGAAAAACTT+GGG - chr8_4:29803652-29803671 Msa1322660:intron 30.0%
!! AAATCAAACTTTTCTGGCAA+TGG + chr8_4:29803757-29803776 None:intergenic 30.0%
! TTAAACCCATGTTACTTACA+TGG - chr8_4:29803778-29803797 Msa1322660:CDS 30.0%
GAAAACCATGTAAGTAACAT+GGG + chr8_4:29803786-29803805 None:intergenic 30.0%
AGAAAACCATGTAAGTAACA+TGG + chr8_4:29803787-29803806 None:intergenic 30.0%
AAATTCCTGTGAATCTTTGA+TGG - chr8_4:29803900-29803919 Msa1322660:intron 30.0%
ATTAACCATCAAAGATTCAC+AGG + chr8_4:29803908-29803927 None:intergenic 30.0%
! CTTTTTACCCTCTTCATTTT+TGG - chr8_4:29803975-29803994 Msa1322660:intron 30.0%
TGTAACACCAAAAATGAAGA+GGG + chr8_4:29803985-29804004 None:intergenic 30.0%
!!! ATTTCTTCCACTTAGTTTTG+TGG - chr8_4:29804076-29804095 Msa1322660:intron 30.0%
! TCCGTAAAATATTTGAAGTG+AGG - chr8_4:29804305-29804324 Msa1322660:intron 30.0%
! ATTTGAAGTGAGGTTCTTTA+CGG - chr8_4:29804315-29804334 Msa1322660:intron 30.0%
TTAGGGATAGATCTAATGTT+TGG + chr8_4:29804449-29804468 None:intergenic 30.0%
GTTTCATTGATCTGTTGTTA+GGG + chr8_4:29804466-29804485 None:intergenic 30.0%
TGAATAGATATGATCTGGAA+CGG - chr8_4:29804754-29804773 Msa1322660:CDS 30.0%
TTAGTGTCAAGTCAAAAATG+GGG + chr8_4:29804842-29804861 None:intergenic 30.0%
CGCATGATATAAGAAAACTT+CGG + chr8_4:29804896-29804915 None:intergenic 30.0%
! CGAAGTTTTCTTATATCATG+CGG - chr8_4:29804894-29804913 Msa1322660:CDS 30.0%
CTGTATGATAACAGAAAAGA+AGG + chr8_4:29804971-29804990 None:intergenic 30.0%
ATCATACAGAGATTTGCATT+TGG - chr8_4:29804982-29805001 Msa1322660:five_prime_UTR 30.0%
ATGAGAAAGGATGAAGAAGT+TGG + chr8_4:29797777-29797796 None:intergenic 35.0%
AGAAGCTGTTATGATGAGAA+AGG + chr8_4:29797790-29797809 None:intergenic 35.0%
GTAATCAAAACGTTGTAAGG+AGG + chr8_4:29797843-29797862 None:intergenic 35.0%
CCAGTAATCAAAACGTTGTA+AGG + chr8_4:29797846-29797865 None:intergenic 35.0%
!!! CCTTACAACGTTTTGATTAC+TGG - chr8_4:29797843-29797862 Msa1322660:three_prime_UTR 35.0%
! AATTTTGGGCTCTATAGAAG+TGG + chr8_4:29798212-29798231 None:intergenic 35.0%
! TCTGACTAAAAGTGAGTTGA+AGG + chr8_4:29798418-29798437 None:intergenic 35.0%
TCTTCTGTCTAATGCATGTT+TGG + chr8_4:29798463-29798482 None:intergenic 35.0%
!! GACCTGTAGATTTTGTTGTA+AGG - chr8_4:29798481-29798500 Msa1322660:intron 35.0%
CTCCTTACAACAAAATCTAC+AGG + chr8_4:29798486-29798505 None:intergenic 35.0%
AAGGAGAGTAGATTAGATGA+AGG - chr8_4:29798500-29798519 Msa1322660:intron 35.0%
AGGAGAGTAGATTAGATGAA+GGG - chr8_4:29798501-29798520 Msa1322660:intron 35.0%
TACCCTATCCCTAAATCATA+AGG + chr8_4:29798744-29798763 None:intergenic 35.0%
!!! GTTTTAGTTTGCTCAAGATC+AGG - chr8_4:29798801-29798820 Msa1322660:intron 35.0%
ATCAGGTGTGGATAAATTCT+TGG - chr8_4:29798818-29798837 Msa1322660:intron 35.0%
AATCTTTCCCTTAGTTCCTT+TGG - chr8_4:29798964-29798983 Msa1322660:intron 35.0%
GGTTTATCCAAAGGAACTAA+GGG + chr8_4:29798974-29798993 None:intergenic 35.0%
TGGTTTATCCAAAGGAACTA+AGG + chr8_4:29798975-29798994 None:intergenic 35.0%
!! GATATTCGGTGCTAAATTGA+CGG - chr8_4:29799037-29799056 Msa1322660:intron 35.0%
!! ATATTCGGTGCTAAATTGAC+GGG - chr8_4:29799038-29799057 Msa1322660:intron 35.0%
TTCCCGTTTCCATATACTTT+AGG - chr8_4:29799061-29799080 Msa1322660:intron 35.0%
TGAATTATGACTGAGTGGTT+GGG - chr8_4:29799382-29799401 Msa1322660:intron 35.0%
AAGAGCTTGAGAGAAGAATT+TGG - chr8_4:29799500-29799519 Msa1322660:intron 35.0%
AGAGCTTGAGAGAAGAATTT+GGG - chr8_4:29799501-29799520 Msa1322660:intron 35.0%
TAAGATAGAAGTTCAAGAGG+AGG + chr8_4:29799545-29799564 None:intergenic 35.0%
!! GTTCACATTTTGTTTCTTGC+AGG - chr8_4:29799622-29799641 Msa1322660:intron 35.0%
ATGTGATGTGAAAAATGGAG+AGG - chr8_4:29799652-29799671 Msa1322660:intron 35.0%
GGTTCTCATTGATAAACTCA+TGG - chr8_4:29799811-29799830 Msa1322660:intron 35.0%
TTGTTGTCAATTATTGGCCA+TGG - chr8_4:29800007-29800026 Msa1322660:intron 35.0%
AATCGGTAACAAATTAGCCA+TGG + chr8_4:29800064-29800083 None:intergenic 35.0%
ATATGCATCATAAAACGCCA+TGG + chr8_4:29800093-29800112 None:intergenic 35.0%
! ATGGCGTTTTATGATGCATA+TGG - chr8_4:29800092-29800111 Msa1322660:intron 35.0%
CTTTGTATTATCAATGCGGA+TGG + chr8_4:29800159-29800178 None:intergenic 35.0%
ATGGTGTAGATCAATAATGC+TGG - chr8_4:29800278-29800297 Msa1322660:intron 35.0%
! AAAATGACATTTAGGGTGCA+AGG + chr8_4:29800373-29800392 None:intergenic 35.0%
!! AGAGGCACTGTAAATAAAGT+AGG - chr8_4:29800504-29800523 Msa1322660:intron 35.0%
! TTAGGCAATAAAGATGATGG+TGG - chr8_4:29800559-29800578 Msa1322660:intron 35.0%
! TAGGCAATAAAGATGATGGT+GGG - chr8_4:29800560-29800579 Msa1322660:intron 35.0%
!!! GCCTATGAGTTGGTATTTTA+TGG - chr8_4:29800926-29800945 Msa1322660:intron 35.0%
CCCATAAAATACCAACTCAT+AGG + chr8_4:29800930-29800949 None:intergenic 35.0%
!! AGTTGGTATTTTATGGGTGA+TGG - chr8_4:29800933-29800952 Msa1322660:intron 35.0%
!! GGTGATGGATTTGTATTGAA+AGG - chr8_4:29800948-29800967 Msa1322660:intron 35.0%
!! GGTAGTCTTATACATGTCAT+GGG - chr8_4:29801031-29801050 Msa1322660:intron 35.0%
!! GTAGTCTTATACATGTCATG+GGG - chr8_4:29801032-29801051 Msa1322660:intron 35.0%
ATGCAGCAAACCTAAGAAAA+GGG + chr8_4:29801075-29801094 None:intergenic 35.0%
TATGCAGCAAACCTAAGAAA+AGG + chr8_4:29801076-29801095 None:intergenic 35.0%
!! TTTCTTAGGTTTGCTGCATA+TGG - chr8_4:29801076-29801095 Msa1322660:intron 35.0%
CTCAATTATATCACAGGTAG+GGG + chr8_4:29801339-29801358 None:intergenic 35.0%
GTCTCAATTATATCACAGGT+AGG + chr8_4:29801341-29801360 None:intergenic 35.0%
GACTCGTAAATACGTACTAT+TGG + chr8_4:29801563-29801582 None:intergenic 35.0%
GATAGAAGAAATACGTCGTT+GGG - chr8_4:29801588-29801607 Msa1322660:intron 35.0%
TTATATGGCCACCTTTAGTT+TGG + chr8_4:29801622-29801641 None:intergenic 35.0%
! AGATTAGTCATTAGCAAAGC+TGG - chr8_4:29801654-29801673 Msa1322660:intron 35.0%
! ATTAGGATTGAGTTGTGTGT+TGG - chr8_4:29801711-29801730 Msa1322660:intron 35.0%
! TTAGGATTGAGTTGTGTGTT+GGG - chr8_4:29801712-29801731 Msa1322660:intron 35.0%
TAGTCACATTGTTCCACAAA+AGG - chr8_4:29801782-29801801 Msa1322660:intron 35.0%
GGAAAAGTAATTCCTGCTTA+CGG - chr8_4:29801803-29801822 Msa1322660:intron 35.0%
GAAAAGTAATTCCTGCTTAC+GGG - chr8_4:29801804-29801823 Msa1322660:intron 35.0%
TGATTCACATATGGCATGTT+TGG - chr8_4:29801873-29801892 Msa1322660:intron 35.0%
CAGTCTTCTTGAAATTTCAC+AGG - chr8_4:29801941-29801960 Msa1322660:CDS 35.0%
TGTCATGGTTCACAATCTTT+CGG - chr8_4:29801992-29802011 Msa1322660:CDS 35.0%
!! TTGGCATAGTCTTTGTTGTT+CGG - chr8_4:29802133-29802152 Msa1322660:intron 35.0%
AATGTGGCTGTAAATGTGAA+GGG + chr8_4:29802203-29802222 None:intergenic 35.0%
AAATGTGGCTGTAAATGTGA+AGG + chr8_4:29802204-29802223 None:intergenic 35.0%
CCTAGGGGACAATTATAAAA+TGG + chr8_4:29802509-29802528 None:intergenic 35.0%
! CCATTTTATAATTGTCCCCT+AGG - chr8_4:29802506-29802525 Msa1322660:intron 35.0%
GAGGGAGTAATATCAATCAT+TGG + chr8_4:29802805-29802824 None:intergenic 35.0%
ATGATTGATATTACTCCCTC+CGG - chr8_4:29802805-29802824 Msa1322660:intron 35.0%
! CTCTTATATTTAAGACCGGA+GGG + chr8_4:29802823-29802842 None:intergenic 35.0%
! TCTCTTATATTTAAGACCGG+AGG + chr8_4:29802824-29802843 None:intergenic 35.0%
AATGAGGTACGTACTTTAGA+GGG + chr8_4:29803051-29803070 None:intergenic 35.0%
AAATGAGGTACGTACTTTAG+AGG + chr8_4:29803052-29803071 None:intergenic 35.0%
! CTAAAGTACGTACCTCATTT+TGG - chr8_4:29803052-29803071 Msa1322660:CDS 35.0%
AAACAGTGATGTTATTCGAC+TGG - chr8_4:29803135-29803154 Msa1322660:intron 35.0%
TGGATCCCTAATCAATAGAA+AGG - chr8_4:29803155-29803174 Msa1322660:intron 35.0%
ACAGACCATCACGATATAAA+GGG + chr8_4:29803348-29803367 None:intergenic 35.0%
CAAAACCACTTTATCGTTCA+AGG + chr8_4:29803397-29803416 None:intergenic 35.0%
!!! GAACGATAAAGTGGTTTTGA+AGG - chr8_4:29803398-29803417 Msa1322660:intron 35.0%
CTATACAGTGTGTTAATCTC+AGG + chr8_4:29803455-29803474 None:intergenic 35.0%
CTGAGATTAACACACTGTAT+AGG - chr8_4:29803453-29803472 Msa1322660:intron 35.0%
GAAAGGCTTGAAGAAAAACT+TGG - chr8_4:29803651-29803670 Msa1322660:intron 35.0%
ATCGAAGAGAATTATGGTAG+TGG - chr8_4:29803683-29803702 Msa1322660:intron 35.0%
CAAAACCAAATCCTTCTAAC+TGG - chr8_4:29803728-29803747 Msa1322660:intron 35.0%
GAGGGTAAAAAGAGAAAAAC+AGG + chr8_4:29803967-29803986 None:intergenic 35.0%
CTGTAACACCAAAAATGAAG+AGG + chr8_4:29803986-29804005 None:intergenic 35.0%
AAGATCTGTTGTAACCATTC+CGG + chr8_4:29804010-29804029 None:intergenic 35.0%
TTGACTTCTTTCTTCTTTGC+AGG - chr8_4:29804105-29804124 Msa1322660:intron 35.0%
CTACGAAAAACTTACCACTT+CGG + chr8_4:29804164-29804183 None:intergenic 35.0%
! TCAACAGGTTAACATTTTCG+AGG + chr8_4:29804361-29804380 None:intergenic 35.0%
AATGTTAACCTGTTGAGTGA+AGG - chr8_4:29804365-29804384 Msa1322660:intron 35.0%
ATAATGTTCCTTCACTCAAC+AGG + chr8_4:29804376-29804395 None:intergenic 35.0%
GGTTTCATTGATCTGTTGTT+AGG + chr8_4:29804467-29804486 None:intergenic 35.0%
TCAATCAAACCTCCGAATAA+CGG - chr8_4:29804783-29804802 Msa1322660:CDS 35.0%
AATTTAGGCAGACGAGAGAA+AGG + chr8_4:29797681-29797700 None:intergenic 40.0%
! AGAGAAGCGGTTGTTATTGT+TGG + chr8_4:29797739-29797758 None:intergenic 40.0%
TAGTGAGAGAAAGAGAGAAG+CGG + chr8_4:29797752-29797771 None:intergenic 40.0%
!! TTGATTACTGGCTCAACCAA+AGG - chr8_4:29797855-29797874 Msa1322660:three_prime_UTR 40.0%
TGGTTGCTATCGAGTTAAGT+TGG - chr8_4:29798266-29798285 Msa1322660:intron 40.0%
!! CTAATGCATGTTTGGTTCTG+CGG + chr8_4:29798455-29798474 None:intergenic 40.0%
AAGGGTAGTCAAATCACAAG+AGG - chr8_4:29798519-29798538 Msa1322660:intron 40.0%
TAGTCAAATCACAAGAGGCA+CGG - chr8_4:29798524-29798543 Msa1322660:intron 40.0%
! AAGCCTTATCCCACTAAATG+GGG + chr8_4:29798646-29798665 None:intergenic 40.0%
! GAAGCCTTATCCCACTAAAT+GGG + chr8_4:29798647-29798666 None:intergenic 40.0%
TTTAGGGATAGGGTATGCTT+TGG - chr8_4:29798749-29798768 Msa1322660:intron 40.0%
! GCGAAGGAATTTCTAAAAGC+AGG - chr8_4:29798771-29798790 Msa1322660:intron 40.0%
TTAGGGACTATATTGAACGC+TGG - chr8_4:29799136-29799155 Msa1322660:intron 40.0%
CCACTCAGTCATAATTCACA+AGG + chr8_4:29799380-29799399 None:intergenic 40.0%
CCTTGTGAATTATGACTGAG+TGG - chr8_4:29799377-29799396 Msa1322660:intron 40.0%
GTGAATTATGACTGAGTGGT+TGG - chr8_4:29799381-29799400 Msa1322660:intron 40.0%
GAGCTTGAGAGAAGAATTTG+GGG - chr8_4:29799502-29799521 Msa1322660:intron 40.0%
AGTCGAAGAATTGAAGGGAA+AGG + chr8_4:29799953-29799972 None:intergenic 40.0%
TTGTCAATTATTGGCCATGG+TGG - chr8_4:29800010-29800029 Msa1322660:intron 40.0%
!!! GGTGGAGGGTTTTTTGATAA+AGG - chr8_4:29800038-29800057 Msa1322660:intron 40.0%
!!! GGGTTTTTTGATAAAGGCCA+TGG - chr8_4:29800044-29800063 Msa1322660:intron 40.0%
TGTATTATCAATGCGGATGG+TGG + chr8_4:29800156-29800175 None:intergenic 40.0%
ATCTACACCATTCTCAGCAT+AGG + chr8_4:29800269-29800288 None:intergenic 40.0%
TTAATTCTGTGGATGCAGTG+AGG - chr8_4:29800417-29800436 Msa1322660:intron 40.0%
GTGGTTACAACAAACACACT+TGG - chr8_4:29800439-29800458 Msa1322660:intron 40.0%
! ATTTTCAATATTGACGGGGC+AGG - chr8_4:29800602-29800621 Msa1322660:CDS 40.0%
TCATTTGGTTAACCATGCTG+TGG - chr8_4:29800797-29800816 Msa1322660:intron 40.0%
!! CGGTAGTCTTATACATGTCA+TGG - chr8_4:29801030-29801049 Msa1322660:intron 40.0%
! GTCATTACAGGTTCGTGTTT+TGG - chr8_4:29801132-29801151 Msa1322660:intron 40.0%
TCACAGTTATCAGCTTGATC+TGG - chr8_4:29801365-29801384 Msa1322660:intron 40.0%
ATCAGCTTGATCTGGTTAAG+AGG - chr8_4:29801373-29801392 Msa1322660:intron 40.0%
GTACGTATTTACGAGTCTTG+TGG - chr8_4:29801566-29801585 Msa1322660:intron 40.0%
GGATAGAAGAAATACGTCGT+TGG - chr8_4:29801587-29801606 Msa1322660:intron 40.0%
AAGAAATACGTCGTTGGGAA+GGG - chr8_4:29801593-29801612 Msa1322660:intron 40.0%
TTAGTCATTAGCAAAGCTGG+TGG - chr8_4:29801657-29801676 Msa1322660:intron 40.0%
ACACCGTACTTAATAAGGAC+TGG + chr8_4:29802166-29802185 None:intergenic 40.0%
ATGTGGCTGTAAATGTGAAG+GGG + chr8_4:29802202-29802221 None:intergenic 40.0%
! AGCCACATTTTCTGAGTTAC+AGG - chr8_4:29802214-29802233 Msa1322660:intron 40.0%
ATGGAGTTTGAATCTCCTAG+GGG + chr8_4:29802524-29802543 None:intergenic 40.0%
GATGGAGTTTGAATCTCCTA+GGG + chr8_4:29802525-29802544 None:intergenic 40.0%
TCTCAACATAAGGGTCTGTT+AGG + chr8_4:29802699-29802718 None:intergenic 40.0%
! TCTCTTATATTTAGGACCGG+AGG - chr8_4:29802938-29802957 Msa1322660:intron 40.0%
! CTCTTATATTTAGGACCGGA+GGG - chr8_4:29802939-29802958 Msa1322660:intron 40.0%
GTATTGTATCATACTCCCTC+CGG + chr8_4:29802957-29802976 None:intergenic 40.0%
! AAGTACGTACCTCATTTTGG+AGG - chr8_4:29803055-29803074 Msa1322660:CDS 40.0%
! GTTTTGCTTCCTCCAAAATG+AGG + chr8_4:29803067-29803086 None:intergenic 40.0%
! GGTGGCCTTTCTATTGATTA+GGG + chr8_4:29803163-29803182 None:intergenic 40.0%
ACTATTTCAGTGTTTCGTCC+TGG + chr8_4:29803189-29803208 None:intergenic 40.0%
GGACGAAACACTGAAATAGT+TGG - chr8_4:29803189-29803208 Msa1322660:intron 40.0%
GGTTTCCCTTTATATCGTGA+TGG - chr8_4:29803340-29803359 Msa1322660:intron 40.0%
CACAGACCATCACGATATAA+AGG + chr8_4:29803349-29803368 None:intergenic 40.0%
TATATCGTGATGGTCTGTGA+CGG - chr8_4:29803350-29803369 Msa1322660:intron 40.0%
! AGGGATGAAAGTTTTGCAAC+AGG + chr8_4:29803377-29803396 None:intergenic 40.0%
TCATCCCTTGAACGATAAAG+TGG - chr8_4:29803389-29803408 Msa1322660:intron 40.0%
GGATTCCAGTTAGAAGGATT+TGG + chr8_4:29803736-29803755 None:intergenic 40.0%
!!! TCATTTTTGGTGTTACAGCC+CGG - chr8_4:29803988-29804007 Msa1322660:intron 40.0%
AGATCTGTTGTAACCATTCC+GGG + chr8_4:29804009-29804028 None:intergenic 40.0%
ACAACAGATCTTCTCATGTC+TGG - chr8_4:29804018-29804037 Msa1322660:intron 40.0%
AGTCAGTCCACAAAACTAAG+TGG + chr8_4:29804086-29804105 None:intergenic 40.0%
! AGTGGTAAGTTTTTCGTAGC+AGG - chr8_4:29804165-29804184 Msa1322660:intron 40.0%
! GTGGTAAGTTTTTCGTAGCA+GGG - chr8_4:29804166-29804185 Msa1322660:intron 40.0%
! AAGTTTTTCGTAGCAGGGAA+TGG - chr8_4:29804171-29804190 Msa1322660:intron 40.0%
ACATATCTGTGATGATTCGC+AGG - chr8_4:29804406-29804425 Msa1322660:intron 40.0%
CAATGAAACCGACATACATC+CGG - chr8_4:29804477-29804496 Msa1322660:intron 40.0%
! TAGATATGATCTGGAACGGA+AGG - chr8_4:29804758-29804777 Msa1322660:CDS 40.0%
CAATCAAACCTCCGAATAAC+GGG - chr8_4:29804784-29804803 Msa1322660:CDS 40.0%
AAAACTTCGGACATATGCAC+AGG + chr8_4:29804883-29804902 None:intergenic 40.0%
!! GTTGTTATTGTTGGTGGTGG+GGG + chr8_4:29797730-29797749 None:intergenic 45.0%
!! GGTTGTTATTGTTGGTGGTG+GGG + chr8_4:29797731-29797750 None:intergenic 45.0%
!! CGGTTGTTATTGTTGGTGGT+GGG + chr8_4:29797732-29797751 None:intergenic 45.0%
! GAAGCGGTTGTTATTGTTGG+TGG + chr8_4:29797736-29797755 None:intergenic 45.0%
AACGTTGTAAGGAGGAAGCA+TGG + chr8_4:29797835-29797854 None:intergenic 45.0%
ACATACACTAAGTGCCCGTT+TGG + chr8_4:29798183-29798202 None:intergenic 45.0%
TTGGGCTCTATAGAAGTGGA+AGG + chr8_4:29798208-29798227 None:intergenic 45.0%
! AGTCAAATCACAAGAGGCAC+GGG - chr8_4:29798525-29798544 Msa1322660:intron 45.0%
CTTATCCCACTAAATGGGGT+CGG + chr8_4:29798642-29798661 None:intergenic 45.0%
! CGAAGCCTTATCCCACTAAA+TGG + chr8_4:29798648-29798667 None:intergenic 45.0%
! AGTTTGCTCAAGATCAGGTG+TGG - chr8_4:29798806-29798825 Msa1322660:intron 45.0%
AATTGAAGGGAAAGGCGAGA+AGG + chr8_4:29799945-29799964 None:intergenic 45.0%
!! TTATTGGCCATGGTGGATTG+CGG - chr8_4:29800017-29800036 Msa1322660:intron 45.0%
TCATCTGATGCTTCAGCAAG+TGG + chr8_4:29800326-29800345 None:intergenic 45.0%
! ACTTGCTGAAGCATCAGATG+AGG - chr8_4:29800325-29800344 Msa1322660:intron 45.0%
! CTTGATGATATGCTGTCGAG+AGG - chr8_4:29800462-29800481 Msa1322660:intron 45.0%
AGTAGGTGCTCTGTTATGCA+TGG - chr8_4:29800521-29800540 Msa1322660:intron 45.0%
TTGAAAATATGACCTCCGCG+AGG + chr8_4:29800590-29800609 None:intergenic 45.0%
!! GTCAAAAAGTACCTGGGAGT+TGG + chr8_4:29800641-29800660 None:intergenic 45.0%
GTTGATTGGGCACATATTCC+TGG - chr8_4:29800684-29800703 Msa1322660:intron 45.0%
! AACCATGCTGTGGTCTTTTG+TGG - chr8_4:29800807-29800826 Msa1322660:intron 45.0%
CTCATAGGCTTTGCACGTAT+TGG + chr8_4:29800915-29800934 None:intergenic 45.0%
TACGTGCAAAGCCTATGAGT+TGG - chr8_4:29800916-29800935 Msa1322660:intron 45.0%
TGGAGCAACAAAGAGAAGTG+TGG - chr8_4:29801096-29801115 Msa1322660:intron 45.0%
GAAGAAATACGTCGTTGGGA+AGG - chr8_4:29801592-29801611 Msa1322660:intron 45.0%
AAGAAACTGTATGGCGTTGC+AGG + chr8_4:29801754-29801773 None:intergenic 45.0%
CAATCATCTATCCCGTAAGC+AGG + chr8_4:29801818-29801837 None:intergenic 45.0%
CTGCTTACGGGATAGATGAT+TGG - chr8_4:29801816-29801835 Msa1322660:intron 45.0%
GGCCTGTAACTCAGAAAATG+TGG + chr8_4:29802219-29802238 None:intergenic 45.0%
GATGTTCGTCTCATCCTGTT+TGG - chr8_4:29802352-29802371 Msa1322660:intron 45.0%
GGATGGAGTTTGAATCTCCT+AGG + chr8_4:29802526-29802545 None:intergenic 45.0%
GATTCAAACTCCATCCCTTG+AGG - chr8_4:29802530-29802549 Msa1322660:intron 45.0%
TCCTGACCTTGTAACCTCAA+GGG + chr8_4:29802547-29802566 None:intergenic 45.0%
ATCCTGACCTTGTAACCTCA+AGG + chr8_4:29802548-29802567 None:intergenic 45.0%
! TTCATGGGGTGTTAGCTTAG+TGG + chr8_4:29802575-29802594 None:intergenic 45.0%
ACCGTCGATATGTCATCAAC+AGG - chr8_4:29803008-29803027 Msa1322660:intron 45.0%
!! GCCTGTTGATGACATATCGA+CGG + chr8_4:29803012-29803031 None:intergenic 45.0%
! ACGTACTTTAGAGGGTACAG+TGG + chr8_4:29803043-29803062 None:intergenic 45.0%
! GGGTGGCCTTTCTATTGATT+AGG + chr8_4:29803164-29803183 None:intergenic 45.0%
TTCAGTGTTTCGTCCTGGAT+GGG + chr8_4:29803184-29803203 None:intergenic 45.0%
TTTCAGTGTTTCGTCCTGGA+TGG + chr8_4:29803185-29803204 None:intergenic 45.0%
CAATGGTTGGATCCAGAGAA+GGG + chr8_4:29803301-29803320 None:intergenic 45.0%
ACAATGGTTGGATCCAGAGA+AGG + chr8_4:29803302-29803321 None:intergenic 45.0%
TTCTCTGGATCCAACCATTG+TGG - chr8_4:29803301-29803320 Msa1322660:intron 45.0%
TCTCTGGATCCAACCATTGT+GGG - chr8_4:29803302-29803321 Msa1322660:intron 45.0%
TTGGACATCCTGAAAAGCTG+AGG - chr8_4:29803503-29803522 Msa1322660:intron 45.0%
TGGACATCCTGAAAAGCTGA+GGG - chr8_4:29803504-29803523 Msa1322660:intron 45.0%
CACTCAAGCTAGTGCACAAA+AGG + chr8_4:29803613-29803632 None:intergenic 45.0%
CGCTGCATCGAAGAGAATTA+TGG - chr8_4:29803677-29803696 Msa1322660:intron 45.0%
! GGCAATGGATTCCAGTTAGA+AGG + chr8_4:29803742-29803761 None:intergenic 45.0%
GAAAAACTTACCACTTCGGC+TGG + chr8_4:29804160-29804179 None:intergenic 45.0%
TTCGCAGGTTGCAGAATACT+TGG - chr8_4:29804421-29804440 Msa1322660:intron 45.0%
AATAGGCTTTCAAACCCGTG+AGG + chr8_4:29804505-29804524 None:intergenic 45.0%
AGAGATTTGCATTTGGCGCA+AGG - chr8_4:29804989-29805008 Msa1322660:five_prime_UTR 45.0%
!! TATGATAAATTTAATAAATT+TGG - chr8_4:29802092-29802111 Msa1322660:intron 5.0%
! GCGGTTGTTATTGTTGGTGG+TGG + chr8_4:29797733-29797752 None:intergenic 50.0%
GGTTCTGCGGTGACAAGAAT+TGG + chr8_4:29798442-29798461 None:intergenic 50.0%
ATGTAGCCGACCCCATTTAG+TGG - chr8_4:29798633-29798652 Msa1322660:intron 50.0%
TGTAGCCGACCCCATTTAGT+GGG - chr8_4:29798634-29798653 Msa1322660:intron 50.0%
CGACCCCATTTAGTGGGATA+AGG - chr8_4:29798640-29798659 Msa1322660:intron 50.0%
GATAGGGTATGCTTTGGCGA+AGG - chr8_4:29798755-29798774 Msa1322660:intron 50.0%
AATTTGGGGAGCAGCATGTG+TGG - chr8_4:29799516-29799535 Msa1322660:intron 50.0%
ATTTGGGGAGCAGCATGTGT+GGG - chr8_4:29799517-29799536 Msa1322660:intron 50.0%
! TGTTACCGATTGCTGCACCA+TGG - chr8_4:29800073-29800092 Msa1322660:intron 50.0%
AAACGCCATGGTGCAGCAAT+CGG + chr8_4:29800081-29800100 None:intergenic 50.0%
TTCTCGGCCTATGCTGAGAA+TGG - chr8_4:29800259-29800278 Msa1322660:intron 50.0%
ATTCTGTGGATGCAGTGAGG+TGG - chr8_4:29800420-29800439 Msa1322660:intron 50.0%
AAATATGACCTCCGCGAGGT+TGG + chr8_4:29800586-29800605 None:intergenic 50.0%
GACCACAAAAGACCACAGCA+TGG + chr8_4:29800812-29800831 None:intergenic 50.0%
AAATACGTCGTTGGGAAGGG+AGG - chr8_4:29801596-29801615 Msa1322660:intron 50.0%
AAGGGAGGCCAAACTAAAGG+TGG - chr8_4:29801611-29801630 Msa1322660:intron 50.0%
GCGTTGCAGGTCAACTAAGT+AGG + chr8_4:29801741-29801760 None:intergenic 50.0%
CTCCATCCCTTGAGGTTACA+AGG - chr8_4:29802538-29802557 Msa1322660:intron 50.0%
GACCTTGTAACCTCAAGGGA+TGG + chr8_4:29802543-29802562 None:intergenic 50.0%
TCCCTTGAGGTTACAAGGTC+AGG - chr8_4:29802543-29802562 Msa1322660:intron 50.0%
AATAGAAAGGCCACCCATCC+AGG - chr8_4:29803168-29803187 Msa1322660:intron 50.0%
TGCATAGCTCCCACAATGGT+TGG + chr8_4:29803314-29803333 None:intergenic 50.0%
GTGTTGCATAGCTCCCACAA+TGG + chr8_4:29803318-29803337 None:intergenic 50.0%
TGTGGGAGCTATGCAACACT+AGG - chr8_4:29803319-29803338 Msa1322660:intron 50.0%
GGACATCCTGAAAAGCTGAG+GGG - chr8_4:29803505-29803524 Msa1322660:intron 50.0%
! AGTAAGCCCCTCAGCTTTTC+AGG + chr8_4:29803514-29803533 None:intergenic 50.0%
!! TTTGGTGTTACAGCCCGGAA+TGG - chr8_4:29803993-29804012 Msa1322660:intron 50.0%
GTCTGGCGCCAATACAAAAC+AGG - chr8_4:29804035-29804054 Msa1322660:intron 50.0%
GTGAGGAACCGGATGTATGT+CGG + chr8_4:29804488-29804507 None:intergenic 50.0%
GACATACATCCGGTTCCTCA+CGG - chr8_4:29804487-29804506 Msa1322660:intron 50.0%
ACATACATCCGGTTCCTCAC+GGG - chr8_4:29804488-29804507 Msa1322660:intron 50.0%
CTTTCAAACCCGTGAGGAAC+CGG + chr8_4:29804499-29804518 None:intergenic 50.0%
!! GTTTTGGTCCCGTTATTCGG+AGG + chr8_4:29804795-29804814 None:intergenic 50.0%
!! CGGGTTTTGGTCCCGTTATT+CGG + chr8_4:29804798-29804817 None:intergenic 50.0%
GTCAAGTCAAAAATGGGGCG+TGG + chr8_4:29804837-29804856 None:intergenic 50.0%
GAAGGGAAAGGCGAGAAGGA+AGG + chr8_4:29799941-29799960 None:intergenic 55.0%
!! TCAATGCGGATGGTGGACAG+TGG + chr8_4:29800149-29800168 None:intergenic 55.0%
ATTGACGGGGCAGGTTCAGA+TGG - chr8_4:29800611-29800630 Msa1322660:intron 55.0%
CAGATGGAAGACCAACTCCC+AGG - chr8_4:29800627-29800646 Msa1322660:intron 55.0%
GGGAAGGGAGGCCAAACTAA+AGG - chr8_4:29801608-29801627 Msa1322660:intron 55.0%
AGTGTTTCGTCCTGGATGGG+TGG + chr8_4:29803181-29803200 None:intergenic 55.0%
GGTTGGATCCAGAGAAGGGT+TGG + chr8_4:29803297-29803316 None:intergenic 55.0%
!! AGCGGTAAGGCAACGGGTTT+TGG + chr8_4:29804811-29804830 None:intergenic 55.0%
AAACCCGTTGCCTTACCGCT+TGG - chr8_4:29804811-29804830 Msa1322660:CDS 55.0%
AAAAATGGGGCGTGGCCAAG+CGG + chr8_4:29804829-29804848 None:intergenic 55.0%
!! ATTGTTGGTGGTGGGGGTGC+AGG + chr8_4:29797724-29797743 None:intergenic 60.0%
!! TTGGCCATGGTGGATTGCGG+TGG - chr8_4:29800020-29800039 Msa1322660:intron 60.0%
!! CCATGGTGGATTGCGGTGGA+GGG - chr8_4:29800024-29800043 Msa1322660:intron 60.0%
!! ATGCGGATGGTGGACAGTGG+TGG + chr8_4:29800146-29800165 None:intergenic 60.0%
!! ATGATGGTGGGCCAACCTCG+CGG - chr8_4:29800572-29800591 Msa1322660:CDS 60.0%
!! CCAGAGAAGGGTTGGCCACA+TGG + chr8_4:29803289-29803308 None:intergenic 60.0%
CCATGTGGCCAACCCTTCTC+TGG - chr8_4:29803286-29803305 Msa1322660:intron 60.0%
CTTGGCTGAACCAGCCGAAG+TGG - chr8_4:29804147-29804166 Msa1322660:intron 60.0%
TGGCCAAGCGGTAAGGCAAC+GGG + chr8_4:29804817-29804836 None:intergenic 60.0%
GTGGCCAAGCGGTAAGGCAA+CGG + chr8_4:29804818-29804837 None:intergenic 60.0%
!! GCCATGGTGGATTGCGGTGG+AGG - chr8_4:29800023-29800042 Msa1322660:intron 65.0%
CCCTCCACCGCAATCCACCA+TGG + chr8_4:29800027-29800046 None:intergenic 65.0%
!! ATGGTGGGCCAACCTCGCGG+AGG - chr8_4:29800575-29800594 Msa1322660:CDS 70.0%
TGGGGCGTGGCCAAGCGGTA+AGG + chr8_4:29804824-29804843 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 29797572 29805013 29797572 ID=Msa1322660;Name=Msa1322660
chr8_4 mRNA 29797572 29805013 29797572 ID=Msa1322660-mRNA-1;Parent=Msa1322660;Name=Msa1322660-mRNA-1;_AED=0.21;_eAED=0.21;_QI=52|1|1|1|1|1|12|466|331
chr8_4 exon 29797572 29798157 29797572 ID=Msa1322660-mRNA-1:exon:10019;Parent=Msa1322660-mRNA-1
chr8_4 exon 29798417 29798458 29798417 ID=Msa1322660-mRNA-1:exon:10018;Parent=Msa1322660-mRNA-1
chr8_4 exon 29798529 29798579 29798529 ID=Msa1322660-mRNA-1:exon:10017;Parent=Msa1322660-mRNA-1
chr8_4 exon 29800572 29800622 29800572 ID=Msa1322660-mRNA-1:exon:10016;Parent=Msa1322660-mRNA-1
chr8_4 exon 29801444 29801501 29801444 ID=Msa1322660-mRNA-1:exon:10015;Parent=Msa1322660-mRNA-1
chr8_4 exon 29801937 29802022 29801937 ID=Msa1322660-mRNA-1:exon:10014;Parent=Msa1322660-mRNA-1
chr8_4 exon 29802102 29802150 29802102 ID=Msa1322660-mRNA-1:exon:10013;Parent=Msa1322660-mRNA-1
chr8_4 exon 29802231 29802298 29802231 ID=Msa1322660-mRNA-1:exon:10012;Parent=Msa1322660-mRNA-1
chr8_4 exon 29802855 29802941 29802855 ID=Msa1322660-mRNA-1:exon:10011;Parent=Msa1322660-mRNA-1
chr8_4 exon 29803047 29803108 29803047 ID=Msa1322660-mRNA-1:exon:10010;Parent=Msa1322660-mRNA-1
chr8_4 exon 29803763 29803831 29803763 ID=Msa1322660-mRNA-1:exon:10009;Parent=Msa1322660-mRNA-1
chr8_4 exon 29804709 29805013 29804709 ID=Msa1322660-mRNA-1:exon:10008;Parent=Msa1322660-mRNA-1
chr8_4 five_prime_UTR 29804962 29805013 29804962 ID=Msa1322660-mRNA-1:five_prime_utr;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29804709 29804961 29804709 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29803763 29803831 29803763 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29803047 29803108 29803047 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29802855 29802941 29802855 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29802231 29802298 29802231 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29802102 29802150 29802102 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29801937 29802022 29801937 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29801444 29801501 29801444 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29800572 29800622 29800572 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29798529 29798579 29798529 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29798417 29798458 29798417 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 CDS 29798038 29798157 29798038 ID=Msa1322660-mRNA-1:cds;Parent=Msa1322660-mRNA-1
chr8_4 three_prime_UTR 29797572 29798037 29797572 ID=Msa1322660-mRNA-1:three_prime_utr;Parent=Msa1322660-mRNA-1
Gene Sequence

>Msa1322660

ATGGCTTCCTTTCAATTGCTTTCTTCTTTTCATTCTCATCATCTTTGCATCTCTCCTTTCTCTCGTCTGCCTAAATTCAACACAACATTGTTTACTTCCTGCACCCCCACCACCAACAATAACAACCGCTTCTCTCTTTCTCTCACTAAACCAACTTCTTCATCCTTTCTCATCATAACAGCTTCTTCTGATTCTAACAACAATAATACCATGCTTCCTCCTTACAACGTTTTGATTACTGGCTCAACCAAAGGGATAGGGTATGCTTTGGCGAAGGAATTTCTAAAAGCAGGAGATAACGTTTTAGTTTGCTCAAGATCAGATGAAAGGGTAGAGAATGCAGTCAAGAGCTTGAGAGAAGAATTTGGGGAGCAGCATGTGTGGGGCACTACATGTGATGTGAAAAATGGAGAGGATGTGAAGAAATTAGTTTCGTTTGCTAAAGAAAAACTGAAATACATTGATATATGGATCAATAATGCTGGATCAAATGCGTATAGCTACAAGCCACTTGCTGAAGCATCAGATGAGGATCTTATTGAGGTGGTTACAACAAACACACTTGGCTTGATGATATGCTGTCGAGAGGCAATAAAGATGATGGTGGGCCAACCTCGCGGAGGTCATATTTTCAATATTGACGGGGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTTCATTTGACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTCATGGTTCACAATCTTTCGCCCGGAATGGTTACAACAGATCTTCTCATGTCTGGCGCCAATACAAAACAGGCAAAGTTTTTCATTAATGTCTTGGCTGAACCAGCCGAAGTGGTTGCAGAATACTTGGTTCCAAACATTAGATCTATCCCTAACAACAGATCAATGAAACCGACATACATCCGGTTCCTCACGGGTTTGAAAGCCTATTCCCAAATATTTTCAGTTAAGTAA

Protein sequence

>Msa1322660

MASFQLLSSFHSHHLCISPFSRLPKFNTTLFTSCTPTTNNNNRFSLSLTKPTSSSFLIITASSDSNNNNTMLPPYNVLITGSTKGIGYALAKEFLKAGDNVLVCSRSDERVENAVKSLREEFGEQHVWGTTCDVKNGEDVKKLVSFAKEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMVGQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVAEYLVPNIRSIPNNRSMKPTYIRFLTGLKAYSQIFSVK*