Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070810 | XP_013467693.1 | 96.429 | 168 | 6 | 0 | 1 | 168 | 1 | 168 | 4.46e-111 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070810 | sp|Q1ACB3|HSTC_ARATH | 54.118 | 170 | 68 | 3 | 1 | 168 | 1 | 162 | 3.05e-48 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070810 | A0A072VUE3 | 96.429 | 168 | 6 | 0 | 1 | 168 | 1 | 168 | 2.13e-111 | 333 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015370 | Msa0070810 | 0.801751 | 7.766498e-49 | -8.615850e-47 |
| Msa0028050 | Msa0070810 | 0.817042 | 4.049165e-52 | -8.615850e-47 |
| Msa0028900 | Msa0070810 | 0.810451 | 1.145030e-50 | -8.615850e-47 |
| Msa0028950 | Msa0070810 | 0.824328 | 8.566304e-54 | -8.615850e-47 |
| Msa0030400 | Msa0070810 | 0.848357 | 6.453692e-60 | -8.615850e-47 |
| Msa0040410 | Msa0070810 | 0.802240 | 6.162159e-49 | -8.615850e-47 |
| Msa0042390 | Msa0070810 | 0.838860 | 2.237659e-57 | -8.615850e-47 |
| Msa0044320 | Msa0070810 | 0.804652 | 1.949207e-49 | -8.615850e-47 |
| Msa0045660 | Msa0070810 | 0.804847 | 1.774549e-49 | -8.615850e-47 |
| Msa0060350 | Msa0070810 | 0.829333 | 5.459852e-55 | -8.615850e-47 |
| Msa0070740 | Msa0070810 | 0.895993 | 5.648295e-76 | -8.615850e-47 |
| Msa0070810 | Msa0079690 | 0.811866 | 5.649634e-51 | -8.615850e-47 |
| Msa0070810 | Msa0094700 | 0.803276 | 3.766337e-49 | -8.615850e-47 |
| Msa0070810 | Msa0094990 | 0.843534 | 1.320768e-58 | -8.615850e-47 |
| Msa0070810 | Msa0100850 | 0.800891 | 1.165045e-48 | -8.615850e-47 |
| Msa0070810 | Msa0115950 | 0.806443 | 8.205168e-50 | -8.615850e-47 |
| Msa0070810 | Msa0118250 | 0.811547 | 6.629415e-51 | -8.615850e-47 |
| Msa0070810 | Msa0126760 | 0.810114 | 1.354047e-50 | -8.615850e-47 |
| Msa0070810 | Msa0127210 | 0.809965 | 1.457634e-50 | -8.615850e-47 |
| Msa0070810 | Msa0130340 | 0.816766 | 4.668328e-52 | -8.615850e-47 |
| Msa0070810 | Msa0136040 | 0.814433 | 1.544399e-51 | -8.615850e-47 |
| Msa0070810 | Msa0141550 | 0.806073 | 9.821185e-50 | -8.615850e-47 |
| Msa0070810 | Msa0143970 | 0.805943 | 1.045661e-49 | -8.615850e-47 |
| Msa0070810 | Msa0143980 | 0.834951 | 2.226469e-56 | -8.615850e-47 |
| Msa0070810 | Msa0162070 | 0.806651 | 7.417486e-50 | -8.615850e-47 |
| Msa0070810 | Msa0164700 | 0.802700 | 4.952851e-49 | -8.615850e-47 |
| Msa0070810 | Msa0168900 | 0.817430 | 3.311558e-52 | -8.615850e-47 |
| Msa0070810 | Msa0168960 | 0.806906 | 6.551409e-50 | -8.615850e-47 |
| Msa0070810 | Msa0173760 | 0.848752 | 5.017012e-60 | -8.615850e-47 |
| Msa0070810 | Msa0173850 | 0.844125 | 9.177129e-59 | -8.615850e-47 |
| Msa0070810 | Msa0177490 | 0.800863 | 1.180308e-48 | -8.615850e-47 |
| Msa0070810 | Msa0179260 | 0.811123 | 8.195269e-51 | -8.615850e-47 |
| Msa0070810 | Msa0181020 | 0.816992 | 4.153857e-52 | -8.615850e-47 |
| Msa0070810 | Msa0206600 | 0.829381 | 5.313804e-55 | -8.615850e-47 |
| Msa0070810 | Msa0206940 | 0.812986 | 3.216942e-51 | -8.615850e-47 |
| Msa0070810 | Msa0218860 | 0.847104 | 1.428133e-59 | -8.615850e-47 |
| Msa0070810 | Msa0235180 | 0.811603 | 6.447276e-51 | -8.615850e-47 |
| Msa0070810 | Msa0236330 | 0.816097 | 6.590347e-52 | -8.615850e-47 |
| Msa0070810 | Msa0251140 | 0.838766 | 2.366266e-57 | -8.615850e-47 |
| Msa0070810 | Msa0258380 | 0.806428 | 8.265611e-50 | -8.615850e-47 |
| Msa0070810 | Msa0265440 | 0.807700 | 4.447208e-50 | -8.615850e-47 |
| Msa0070810 | Msa0269360 | 0.812481 | 4.148370e-51 | -8.615850e-47 |
| Msa0070810 | Msa0272420 | 0.811864 | 5.655355e-51 | -8.615850e-47 |
| Msa0070810 | Msa0278720 | 0.835188 | 1.940024e-56 | -8.615850e-47 |
| Msa0070810 | Msa0281310 | 0.805387 | 1.367997e-49 | -8.615850e-47 |
| Msa0070810 | Msa0282860 | 0.817033 | 4.067734e-52 | -8.615850e-47 |
| Msa0070810 | Msa0287010 | 0.829610 | 4.675711e-55 | -8.615850e-47 |
| Msa0070810 | Msa0304000 | 0.800834 | 1.196885e-48 | -8.615850e-47 |
| Msa0070810 | Msa0304020 | 0.811746 | 5.999535e-51 | -8.615850e-47 |
| Msa0070810 | Msa0315010 | 0.847360 | 1.215160e-59 | -8.615850e-47 |
| Msa0070810 | Msa0327900 | 0.820097 | 8.211521e-53 | -8.615850e-47 |
| Msa0070810 | Msa0361500 | 0.814079 | 1.849284e-51 | -8.615850e-47 |
| Msa0070810 | Msa0363440 | 0.828128 | 1.067988e-54 | -8.615850e-47 |
| Msa0070810 | Msa0370690 | 0.818844 | 1.585734e-52 | -8.615850e-47 |
| Msa0070810 | Msa0380430 | 0.806750 | 7.070149e-50 | -8.615850e-47 |
| Msa0070810 | Msa0398850 | 0.824233 | 9.019590e-54 | -8.615850e-47 |
| Msa0070810 | Msa0399720 | 0.814825 | 1.264787e-51 | -8.615850e-47 |
| Msa0070810 | Msa0412540 | 0.804634 | 1.965794e-49 | -8.615850e-47 |
| Msa0070810 | Msa0414070 | 0.816609 | 5.064337e-52 | -8.615850e-47 |
| Msa0070810 | Msa0438440 | 0.846219 | 2.492351e-59 | -8.615850e-47 |
| Msa0070810 | Msa0439700 | 0.815367 | 9.587690e-52 | -8.615850e-47 |
| Msa0070810 | Msa0440110 | 0.800803 | 1.214302e-48 | -8.615850e-47 |
| Msa0070810 | Msa0456940 | 0.836285 | 1.023336e-56 | -8.615850e-47 |
| Msa0070810 | Msa0458790 | 0.813369 | 2.650592e-51 | -8.615850e-47 |
| Msa0070810 | Msa0471890 | 0.831863 | 1.311740e-55 | -8.615850e-47 |
| Msa0070810 | Msa0473490 | 0.828833 | 7.215059e-55 | -8.615850e-47 |
| Msa0070810 | Msa0475740 | 0.819553 | 1.093104e-52 | -8.615850e-47 |
| Msa0070810 | Msa0476180 | 0.850297 | 1.860221e-60 | -8.615850e-47 |
| Msa0070810 | Msa0476820 | 0.827480 | 1.528249e-54 | -8.615850e-47 |
| Msa0070810 | Msa0501470 | 0.815819 | 7.603383e-52 | -8.615850e-47 |
| Msa0070810 | Msa0505390 | 0.806009 | 1.012787e-49 | -8.615850e-47 |
| Msa0070810 | Msa0510410 | 0.815957 | 7.082415e-52 | -8.615850e-47 |
| Msa0070810 | Msa0512430 | 0.824088 | 9.755070e-54 | -8.615850e-47 |
| Msa0070810 | Msa0524050 | 0.814008 | 1.917239e-51 | -8.615850e-47 |
| Msa0070810 | Msa0528740 | 0.820770 | 5.755596e-53 | -8.615850e-47 |
| Msa0070810 | Msa0530930 | 0.820398 | 7.005970e-53 | -8.615850e-47 |
| Msa0070810 | Msa0534380 | 0.810432 | 1.155998e-50 | -8.615850e-47 |
| Msa0070810 | Msa0535050 | 0.802797 | 4.729725e-49 | -8.615850e-47 |
| Msa0070810 | Msa0539320 | 0.824140 | 9.484583e-54 | -8.615850e-47 |
| Msa0070810 | Msa0539400 | 0.837163 | 6.112468e-57 | -8.615850e-47 |
| Msa0070810 | Msa0547780 | 0.800194 | 1.615593e-48 | -8.615850e-47 |
| Msa0070810 | Msa0555980 | 0.843598 | 1.269551e-58 | -8.615850e-47 |
| Msa0070810 | Msa0557770 | 0.822299 | 2.550888e-53 | -8.615850e-47 |
| Msa0070810 | Msa0565530 | 0.861961 | 7.098058e-64 | -8.615850e-47 |
| Msa0070810 | Msa0568120 | 0.851437 | 8.881837e-61 | -8.615850e-47 |
| Msa0070810 | Msa0570490 | 0.837403 | 5.306449e-57 | -8.615850e-47 |
| Msa0070810 | Msa0570770 | 0.800758 | 1.240440e-48 | -8.615850e-47 |
| Msa0070810 | Msa0573970 | 0.806882 | 6.630225e-50 | -8.615850e-47 |
| Msa0070810 | Msa0575460 | 0.815079 | 1.110862e-51 | -8.615850e-47 |
| Msa0070810 | Msa0579610 | 0.826206 | 3.080298e-54 | -8.615850e-47 |
| Msa0070810 | Msa0583930 | 0.820200 | 7.775985e-53 | -8.615850e-47 |
| Msa0070810 | Msa0587900 | 0.811669 | 6.237794e-51 | -8.615850e-47 |
| Msa0070810 | Msa0589600 | 0.803549 | 3.306809e-49 | -8.615850e-47 |
| Msa0070810 | Msa0591780 | 0.835511 | 1.607988e-56 | -8.615850e-47 |
| Msa0070810 | Msa0617370 | 0.823150 | 1.617417e-53 | -8.615850e-47 |
| Msa0070810 | Msa0619590 | -0.810175 | 1.313611e-50 | -8.615850e-47 |
| Msa0070810 | Msa0622690 | 0.801179 | 1.017244e-48 | -8.615850e-47 |
| Msa0070810 | Msa0625310 | 0.821492 | 3.923131e-53 | -8.615850e-47 |
| Msa0070810 | Msa0635130 | 0.827659 | 1.384915e-54 | -8.615850e-47 |
| Msa0070810 | Msa0637850 | 0.806959 | 6.384783e-50 | -8.615850e-47 |
| Msa0070810 | Msa0645780 | 0.814328 | 1.629442e-51 | -8.615850e-47 |
| Msa0070810 | Msa0650360 | 0.825054 | 5.778568e-54 | -8.615850e-47 |
| Msa0070810 | Msa0653090 | 0.801929 | 7.139081e-49 | -8.615850e-47 |
| Msa0070810 | Msa0672350 | 0.803959 | 2.718256e-49 | -8.615850e-47 |
| Msa0070810 | Msa0675790 | 0.803986 | 2.683027e-49 | -8.615850e-47 |
| Msa0070810 | Msa0677840 | 0.827666 | 1.379585e-54 | -8.615850e-47 |
| Msa0070810 | Msa0688550 | 0.837847 | 4.081669e-57 | -8.615850e-47 |
| Msa0070810 | Msa0692910 | 0.863345 | 2.659513e-64 | -8.615850e-47 |
| Msa0070810 | Msa0705710 | 0.819144 | 1.354973e-52 | -8.615850e-47 |
| Msa0070810 | Msa0716430 | 0.801558 | 8.507238e-49 | -8.615850e-47 |
| Msa0070810 | Msa0716740 | -0.801299 | 9.611859e-49 | -8.615850e-47 |
| Msa0070810 | Msa0716780 | 0.808015 | 3.811069e-50 | -8.615850e-47 |
| Msa0070810 | Msa0725640 | 0.808764 | 2.638346e-50 | -8.615850e-47 |
| Msa0070810 | Msa0727300 | 0.827444 | 1.559395e-54 | -8.615850e-47 |
| Msa0070810 | Msa0749900 | 0.831528 | 1.586579e-55 | -8.615850e-47 |
| Msa0070810 | Msa0750380 | 0.804717 | 1.888797e-49 | -8.615850e-47 |
| Msa0070810 | Msa0756410 | 0.807870 | 4.091055e-50 | -8.615850e-47 |
| Msa0070810 | Msa0756480 | 0.826097 | 3.269648e-54 | -8.615850e-47 |
| Msa0070810 | Msa0760950 | 0.828263 | 9.906780e-55 | -8.615850e-47 |
| Msa0070810 | Msa0774560 | 0.840694 | 7.452962e-58 | -8.615850e-47 |
| Msa0070810 | Msa0792170 | 0.822345 | 2.489873e-53 | -8.615850e-47 |
| Msa0070810 | Msa0794460 | 0.822938 | 1.811996e-53 | -8.615850e-47 |
| Msa0070810 | Msa0797220 | 0.817581 | 3.061963e-52 | -8.615850e-47 |
| Msa0070810 | Msa0798950 | 0.831846 | 1.324328e-55 | -8.615850e-47 |
| Msa0070810 | Msa0801480 | 0.801409 | 9.126392e-49 | -8.615850e-47 |
| Msa0070810 | Msa0803930 | 0.818893 | 1.545032e-52 | -8.615850e-47 |
| Msa0070810 | Msa0807850 | 0.816035 | 6.805372e-52 | -8.615850e-47 |
| Msa0070810 | Msa0807950 | 0.827529 | 1.488036e-54 | -8.615850e-47 |
| Msa0070810 | Msa0829110 | 0.850398 | 1.742975e-60 | -8.615850e-47 |
| Msa0070810 | Msa0829430 | 0.864371 | 1.275606e-64 | -8.615850e-47 |
| Msa0070810 | Msa0830120 | 0.832006 | 1.209321e-55 | -8.615850e-47 |
| Msa0070810 | Msa0830450 | 0.832232 | 1.062872e-55 | -8.615850e-47 |
| Msa0070810 | Msa0834690 | 0.838597 | 2.616900e-57 | -8.615850e-47 |
| Msa0070810 | Msa0835510 | 0.831837 | 1.331168e-55 | -8.615850e-47 |
| Msa0070810 | Msa0840630 | 0.854474 | 1.201659e-61 | -8.615850e-47 |
| Msa0070810 | Msa0845730 | 0.801733 | 7.833063e-49 | -8.615850e-47 |
| Msa0070810 | Msa0848380 | 0.820088 | 8.252346e-53 | -8.615850e-47 |
| Msa0070810 | Msa0881050 | 0.852981 | 3.230301e-61 | -8.615850e-47 |
| Msa0070810 | Msa0929400 | 0.864402 | 1.247931e-64 | -8.615850e-47 |
| Msa0070810 | Msa0935730 | 0.801947 | 7.078360e-49 | -8.615850e-47 |
| Msa0070810 | Msa0968450 | 0.812506 | 4.097123e-51 | -8.615850e-47 |
| Msa0070810 | Msa0975080 | 0.808383 | 3.181514e-50 | -8.615850e-47 |
| Msa0070810 | Msa1000470 | 0.819894 | 9.137164e-53 | -8.615850e-47 |
| Msa0070810 | Msa1026610 | 0.813841 | 2.086703e-51 | -8.615850e-47 |
| Msa0070810 | Msa1029320 | 0.800745 | 1.247485e-48 | -8.615850e-47 |
| Msa0070810 | Msa1029430 | 0.841655 | 4.165811e-58 | -8.615850e-47 |
| Msa0070810 | Msa1035790 | 0.813871 | 2.054985e-51 | -8.615850e-47 |
| Msa0070810 | Msa1064210 | 0.804688 | 1.915865e-49 | -8.615850e-47 |
| Msa0070810 | Msa1068290 | 0.811004 | 8.694380e-51 | -8.615850e-47 |
| Msa0070810 | Msa1081700 | 0.857199 | 1.919894e-62 | -8.615850e-47 |
| Msa0070810 | Msa1081850 | 0.805144 | 1.538163e-49 | -8.615850e-47 |
| Msa0070810 | Msa1092430 | 0.816483 | 5.403496e-52 | -8.615850e-47 |
| Msa0070810 | Msa1098350 | 0.804815 | 1.801866e-49 | -8.615850e-47 |
| Msa0070810 | Msa1114240 | 0.805453 | 1.325567e-49 | -8.615850e-47 |
| Msa0070810 | Msa1117280 | 0.839394 | 1.627243e-57 | -8.615850e-47 |
| Msa0070810 | Msa1145370 | 0.809845 | 1.546688e-50 | -8.615850e-47 |
| Msa0070810 | Msa1146150 | 0.802947 | 4.404913e-49 | -8.615850e-47 |
| Msa0070810 | Msa1151960 | 0.801846 | 7.424552e-49 | -8.615850e-47 |
| Msa0070810 | Msa1157310 | 0.802264 | 6.093492e-49 | -8.615850e-47 |
| Msa0070810 | Msa1161760 | 0.804504 | 2.092828e-49 | -8.615850e-47 |
| Msa0070810 | Msa1184640 | 0.817275 | 3.588143e-52 | -8.615850e-47 |
| Msa0070810 | Msa1185030 | 0.812450 | 4.213362e-51 | -8.615850e-47 |
| Msa0070810 | Msa1188210 | 0.809517 | 1.819408e-50 | -8.615850e-47 |
| Msa0070810 | Msa1204430 | 0.866228 | 3.323165e-65 | -8.615850e-47 |
| Msa0070810 | Msa1205520 | 0.830989 | 2.152585e-55 | -8.615850e-47 |
| Msa0070810 | Msa1206440 | 0.803249 | 3.814131e-49 | -8.615850e-47 |
| Msa0070810 | Msa1208250 | 0.826308 | 2.912850e-54 | -8.615850e-47 |
| Msa0070810 | Msa1212740 | 0.836096 | 1.142968e-56 | -8.615850e-47 |
| Msa0070810 | Msa1212960 | 0.845451 | 4.027192e-59 | -8.615850e-47 |
| Msa0070810 | Msa1213550 | 0.841274 | 5.247468e-58 | -8.615850e-47 |
| Msa0070810 | Msa1214210 | 0.854775 | 9.834833e-62 | -8.615850e-47 |
| Msa0070810 | Msa1214900 | 0.818093 | 2.346879e-52 | -8.615850e-47 |
| Msa0070810 | Msa1222390 | 0.818282 | 2.126409e-52 | -8.615850e-47 |
| Msa0070810 | Msa1222580 | 0.859308 | 4.524159e-63 | -8.615850e-47 |
| Msa0070810 | Msa1228880 | 0.850950 | 1.218841e-60 | -8.615850e-47 |
| Msa0070810 | Msa1233770 | 0.801708 | 7.926480e-49 | -8.615850e-47 |
| Msa0070810 | Msa1238700 | 0.819186 | 1.325334e-52 | -8.615850e-47 |
| Msa0070810 | Msa1238710 | 0.804486 | 2.111233e-49 | -8.615850e-47 |
| Msa0070810 | Msa1239000 | 0.822205 | 2.683348e-53 | -8.615850e-47 |
| Msa0070810 | Msa1239870 | -0.819781 | 9.698942e-53 | -8.615850e-47 |
| Msa0070810 | Msa1247720 | 0.823038 | 1.717741e-53 | -8.615850e-47 |
| Msa0070810 | Msa1254990 | 0.805102 | 1.569951e-49 | -8.615850e-47 |
| Msa0070810 | Msa1280020 | 0.817202 | 3.725779e-52 | -8.615850e-47 |
| Msa0070810 | Msa1291140 | 0.858022 | 1.095216e-62 | -8.615850e-47 |
| Msa0070810 | Msa1296650 | 0.852287 | 5.098251e-61 | -8.615850e-47 |
| Msa0070810 | Msa1297720 | 0.846440 | 2.168681e-59 | -8.615850e-47 |
| Msa0070810 | Msa1299940 | 0.805072 | 1.592730e-49 | -8.615850e-47 |
| Msa0070810 | Msa1302750 | 0.803882 | 2.820029e-49 | -8.615850e-47 |
| Msa0070810 | Msa1309100 | 0.804787 | 1.827131e-49 | -8.615850e-47 |
| Msa0070810 | Msa1322660 | 0.815728 | 7.967389e-52 | -8.615850e-47 |
| Msa0070810 | Msa1326000 | 0.817832 | 2.687306e-52 | -8.615850e-47 |
| Msa0070810 | Msa1330280 | 0.809941 | 1.475180e-50 | -8.615850e-47 |
| Msa0070810 | Msa1331400 | 0.838673 | 2.500728e-57 | -8.615850e-47 |
| Msa0070810 | Msa1331610 | 0.823200 | 1.574564e-53 | -8.615850e-47 |
| Msa0070810 | Msa1341790 | 0.828217 | 1.016256e-54 | -8.615850e-47 |
| Msa0070810 | Msa1345120 | 0.813192 | 2.898045e-51 | -8.615850e-47 |
| Msa0070810 | Msa1349490 | 0.807208 | 5.655704e-50 | -8.615850e-47 |
| Msa0070810 | Msa1350280 | 0.803770 | 2.974317e-49 | -8.615850e-47 |
| Msa0070810 | Msa1356680 | 0.830606 | 2.671281e-55 | -8.615850e-47 |
| Msa0070810 | Msa1357380 | 0.829133 | 6.103784e-55 | -8.615850e-47 |
| Msa0070810 | Msa1365120 | 0.864916 | 8.612824e-65 | -8.615850e-47 |
| Msa0070810 | Msa1366700 | 0.827848 | 1.247062e-54 | -8.615850e-47 |
| Msa0070810 | Msa1369900 | 0.816784 | 4.625650e-52 | -8.615850e-47 |
| Msa0070810 | Msa1371840 | 0.806780 | 6.965628e-50 | -8.615850e-47 |
| Msa0070810 | Msa1386020 | 0.814872 | 1.235097e-51 | -8.615850e-47 |
| Msa0070810 | Msa1391600 | 0.803698 | 3.079392e-49 | -8.615850e-47 |
| Msa0070810 | Msa1397110 | 0.820995 | 5.109300e-53 | -8.615850e-47 |
| Msa0070810 | Msa1406550 | 0.837794 | 4.212980e-57 | -8.615850e-47 |
| Msa0070810 | Msa1425510 | 0.802551 | 5.317397e-49 | -8.615850e-47 |
| Msa0070810 | Msa1430760 | 0.852329 | 4.959601e-61 | -8.615850e-47 |
| Msa0070810 | Msa1435990 | 0.836539 | 8.822030e-57 | -8.615850e-47 |
| Msa0070810 | Msa1437650 | 0.831606 | 1.517601e-55 | -8.615850e-47 |
| Msa0070810 | Msa1463210 | 0.828273 | 9.851450e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070810 | MtrunA17_Chr1g0176251 | 96.429 | 168 | 6 | 0 | 1 | 168 | 1 | 168 | 4.10e-115 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0070810 | AT3G11945.1 | 54.118 | 170 | 68 | 3 | 1 | 168 | 1 | 162 | 3.10e-49 | 165 |
| Msa0070810 | AT3G11945.2 | 49.711 | 173 | 78 | 4 | 1 | 168 | 1 | 169 | 4.17e-43 | 149 |
Find 41 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAACCGTTTGGAAGATTT+TGG | 0.150033 | 1_2:+41689692 | None:intergenic |
| GGAATTCCATGTGGGAATTA+TGG | 0.238319 | 1_2:+41689763 | None:intergenic |
| TCCAAACGGTTTGGTTCAAT+TGG | 0.282213 | 1_2:-41689683 | Msa0070810:CDS |
| AGTGTTGCTTCAGCTCCTTA+TGG | 0.337423 | 1_2:-41689825 | Msa0070810:exon |
| TGCAGTGAAGTTGGAGCTGC+TGG | 0.338973 | 1_2:-41688217 | Msa0070810:CDS |
| TCCTCTCGTTTACAGTGCTT+TGG | 0.365761 | 1_2:-41688014 | Msa0070810:intron |
| GCACCATACCCTGATGGAAA+TGG | 0.372893 | 1_2:+41689595 | None:intergenic |
| CCAAAATCTTCCAAACGGTT+TGG | 0.382677 | 1_2:-41689692 | Msa0070810:CDS |
| CCCAATTGAACCAAACCGTT+TGG | 0.399938 | 1_2:+41689682 | None:intergenic |
| ACTATCCGTGGTACAGCATT+AGG | 0.405007 | 1_2:-41688124 | Msa0070810:CDS |
| TGTGGGAACGGTTATATAGT+TGG | 0.416597 | 1_2:-41687908 | Msa0070810:CDS |
| TCTAAAACTTTGTCAGCAAA+TGG | 0.421719 | 1_2:+41688184 | None:intergenic |
| GAGCTGAAGCAACACTCAAC+TGG | 0.434312 | 1_2:+41689832 | None:intergenic |
| ATTGGCAAGAAATGTGCAAA+AGG | 0.455107 | 1_2:+41687771 | None:intergenic |
| CACCATACCCTGATGGAAAT+GGG | 0.462468 | 1_2:+41689596 | None:intergenic |
| CCAAACGGTTTGGTTCAATT+GGG | 0.472071 | 1_2:-41689682 | Msa0070810:CDS |
| AGTGTAAACCCATTTCCATC+AGG | 0.473401 | 1_2:-41689604 | Msa0070810:CDS |
| AGAACTCAAATCTGATAAAG+TGG | 0.498811 | 1_2:-41687973 | Msa0070810:CDS |
| TTGGCAAGAAATGTGCAAAA+GGG | 0.510964 | 1_2:+41687772 | None:intergenic |
| AGCAGCTCCAACTTCACTGC+AGG | 0.512238 | 1_2:+41688219 | None:intergenic |
| TGAAGGTGTTCTTGCTGATG+TGG | 0.522835 | 1_2:+41689880 | None:intergenic |
| AAGAAGTAGAGAGCTCCATA+AGG | 0.529817 | 1_2:+41689810 | None:intergenic |
| AAGGGGACGAAAGAAAGAAA+AGG | 0.532096 | 1_2:+41687790 | None:intergenic |
| GAAGGTGTTCTTGCTGATGT+GGG | 0.543264 | 1_2:+41689881 | None:intergenic |
| AGTTGTGGACTTAGCTGAAG+TGG | 0.543496 | 1_2:+41689715 | None:intergenic |
| CAACTCCAAAATCTTCCAAA+CGG | 0.544220 | 1_2:-41689697 | Msa0070810:CDS |
| GACACACAAACGTTTGATGA+AGG | 0.556344 | 1_2:+41689863 | None:intergenic |
| TTTGCTCTGATTTGTGGGAA+CGG | 0.556648 | 1_2:-41687920 | Msa0070810:CDS |
| ATCAATCAAATATATGACAT+TGG | 0.566344 | 1_2:-41687884 | Msa0070810:CDS |
| TTGCAGGCCTGCAGTGAAGT+TGG | 0.583928 | 1_2:-41688226 | Msa0070810:intron |
| ACAAAAGCACCATACCCTGA+TGG | 0.588818 | 1_2:+41689589 | None:intergenic |
| TGGCAAGAAATGTGCAAAAG+GGG | 0.594667 | 1_2:+41687773 | None:intergenic |
| CACATTCCATAATTCCCACA+TGG | 0.597325 | 1_2:-41689769 | Msa0070810:CDS |
| GCTGTACCACGGATAGTATG+TGG | 0.609127 | 1_2:+41688130 | None:intergenic |
| ATAAACTTGTATGATGATGA+TGG | 0.610650 | 1_2:+41689654 | None:intergenic |
| GTTGTGGACTTAGCTGAAGT+GGG | 0.621747 | 1_2:+41689716 | None:intergenic |
| GTGTAAACCCATTTCCATCA+GGG | 0.626735 | 1_2:-41689603 | Msa0070810:intron |
| TTAAGGCCACATACTATCCG+TGG | 0.626803 | 1_2:-41688136 | Msa0070810:CDS |
| AAGGTGTTCTTGCTGATGTG+GGG | 0.629637 | 1_2:+41689882 | None:intergenic |
| GTGGACTTAGCTGAAGTGGG+TGG | 0.649212 | 1_2:+41689719 | None:intergenic |
| AAGAACCTAATGCTGTACCA+CGG | 0.731271 | 1_2:+41688119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGTTTATATTAATTTAC+CGG | - | chr1_2:41688352-41688371 | Msa0070810:intron | 10.0% |
| !! | TATAGTTTATATTAATTTAC+CGG | - | chr1_2:41688352-41688371 | Msa0070810:intron | 10.0% |
| !!! | TGATTTTATTTGGAAAAATT+TGG | - | chr1_2:41688123-41688142 | Msa0070810:CDS | 15.0% |
| !! | ATTGAAACCTATTTATATAA+CGG | - | chr1_2:41688551-41688570 | Msa0070810:intron | 15.0% |
| !! | AGAAGAAAAATATTGAAAAT+TGG | + | chr1_2:41689899-41689918 | None:intergenic | 15.0% |
| !!! | TGATTTTATTTGGAAAAATT+TGG | - | chr1_2:41688123-41688142 | Msa0070810:CDS | 15.0% |
| !! | ATTGAAACCTATTTATATAA+CGG | - | chr1_2:41688551-41688570 | Msa0070810:intron | 15.0% |
| !! | AGAAGAAAAATATTGAAAAT+TGG | + | chr1_2:41689899-41689918 | None:intergenic | 15.0% |
| !!! | TTTTATTTGGAAAAATTTGG+TGG | - | chr1_2:41688126-41688145 | Msa0070810:CDS | 20.0% |
| !! | TTTATTTGGAAAAATTTGGT+GGG | - | chr1_2:41688127-41688146 | Msa0070810:CDS | 20.0% |
| !!! | AGCAATGTATTTTAATTACT+TGG | - | chr1_2:41688228-41688247 | Msa0070810:intron | 20.0% |
| !!! | TAATCACTAAATATTTTCTG+TGG | - | chr1_2:41689196-41689215 | Msa0070810:intron | 20.0% |
| !! | TTTGCTAACTTCAATAAATT+CGG | + | chr1_2:41689346-41689365 | None:intergenic | 20.0% |
| !! | ATCAATCAAATATATGACAT+TGG | - | chr1_2:41689765-41689784 | Msa0070810:CDS | 20.0% |
| !!! | TTTTCAATATTTTTCTTCTG+AGG | - | chr1_2:41689900-41689919 | Msa0070810:five_prime_UTR | 20.0% |
| !!! | TTTTATTTGGAAAAATTTGG+TGG | - | chr1_2:41688126-41688145 | Msa0070810:CDS | 20.0% |
| !! | TTTATTTGGAAAAATTTGGT+GGG | - | chr1_2:41688127-41688146 | Msa0070810:CDS | 20.0% |
| !!! | AGCAATGTATTTTAATTACT+TGG | - | chr1_2:41688228-41688247 | Msa0070810:intron | 20.0% |
| !!! | TAATCACTAAATATTTTCTG+TGG | - | chr1_2:41689196-41689215 | Msa0070810:intron | 20.0% |
| !! | TTTGCTAACTTCAATAAATT+CGG | + | chr1_2:41689346-41689365 | None:intergenic | 20.0% |
| !! | ATCAATCAAATATATGACAT+TGG | - | chr1_2:41689765-41689784 | Msa0070810:CDS | 20.0% |
| !! | TTTGAAAGAGTAGTAGTTTT+TGG | + | chr1_2:41687910-41687929 | None:intergenic | 25.0% |
| !! | ATAAACTTGTATGATGATGA+TGG | + | chr1_2:41687998-41688017 | None:intergenic | 25.0% |
| !!! | TGTTAGCTTGTGATTTTATT+TGG | - | chr1_2:41688113-41688132 | Msa0070810:intron | 25.0% |
| ! | AAAGGTTGAGAATGAATAAT+GGG | - | chr1_2:41688179-41688198 | Msa0070810:CDS | 25.0% |
| ! | TTTAATTACTTGGATCTTTC+AGG | - | chr1_2:41688238-41688257 | Msa0070810:intron | 25.0% |
| ! | AACTGAGTTATTAGAGTAAA+TGG | - | chr1_2:41688485-41688504 | Msa0070810:intron | 25.0% |
| ! | TTTGCTTCCGTTATATAAAT+AGG | + | chr1_2:41688561-41688580 | None:intergenic | 25.0% |
| ! | TCAATTGAAATGTAACGTAA+CGG | - | chr1_2:41688598-41688617 | Msa0070810:intron | 25.0% |
| ! | TGAAATGATAGGATCAATAT+AGG | - | chr1_2:41688835-41688854 | Msa0070810:intron | 25.0% |
| !! | TTTTATTGAAATGATCCAGT+TGG | - | chr1_2:41689043-41689062 | Msa0070810:intron | 25.0% |
| ! | AACAAAATTGATGTAACTGA+CGG | + | chr1_2:41689319-41689338 | None:intergenic | 25.0% |
| ! | TTGAATCAAAACCAAAAGTA+GGG | + | chr1_2:41689378-41689397 | None:intergenic | 25.0% |
| ! | ATTGAATCAAAACCAAAAGT+AGG | + | chr1_2:41689379-41689398 | None:intergenic | 25.0% |
| !!! | TAGATTTTAAAGATGCATTC+TGG | - | chr1_2:41689484-41689503 | Msa0070810:intron | 25.0% |
| !! | TTTGAAAGAGTAGTAGTTTT+TGG | + | chr1_2:41687910-41687929 | None:intergenic | 25.0% |
| !! | ATAAACTTGTATGATGATGA+TGG | + | chr1_2:41687998-41688017 | None:intergenic | 25.0% |
| !!! | TGTTAGCTTGTGATTTTATT+TGG | - | chr1_2:41688113-41688132 | Msa0070810:intron | 25.0% |
| ! | AAAGGTTGAGAATGAATAAT+GGG | - | chr1_2:41688179-41688198 | Msa0070810:CDS | 25.0% |
| ! | TTTAATTACTTGGATCTTTC+AGG | - | chr1_2:41688238-41688257 | Msa0070810:intron | 25.0% |
| ! | AACTGAGTTATTAGAGTAAA+TGG | - | chr1_2:41688485-41688504 | Msa0070810:intron | 25.0% |
| ! | TTTGCTTCCGTTATATAAAT+AGG | + | chr1_2:41688561-41688580 | None:intergenic | 25.0% |
| ! | TCAATTGAAATGTAACGTAA+CGG | - | chr1_2:41688598-41688617 | Msa0070810:intron | 25.0% |
| ! | TGAAATGATAGGATCAATAT+AGG | - | chr1_2:41688835-41688854 | Msa0070810:intron | 25.0% |
| !! | TTTTATTGAAATGATCCAGT+TGG | - | chr1_2:41689043-41689062 | Msa0070810:intron | 25.0% |
| ! | AACAAAATTGATGTAACTGA+CGG | + | chr1_2:41689319-41689338 | None:intergenic | 25.0% |
| ! | TTGAATCAAAACCAAAAGTA+GGG | + | chr1_2:41689378-41689397 | None:intergenic | 25.0% |
| ! | ATTGAATCAAAACCAAAAGT+AGG | + | chr1_2:41689379-41689398 | None:intergenic | 25.0% |
| !!! | TAGATTTTAAAGATGCATTC+TGG | - | chr1_2:41689484-41689503 | Msa0070810:intron | 25.0% |
| !!! | TAGTTTTTGGAATTCCATGT+GGG | + | chr1_2:41687897-41687916 | None:intergenic | 30.0% |
| AGTTCATGGAAAATTCAGAA+AGG | - | chr1_2:41688161-41688180 | Msa0070810:CDS | 30.0% | |
| GAAAGGTTGAGAATGAATAA+TGG | - | chr1_2:41688178-41688197 | Msa0070810:CDS | 30.0% | |
| AAGGTTGAGAATGAATAATG+GGG | - | chr1_2:41688180-41688199 | Msa0070810:CDS | 30.0% | |
| TAGAATTGAAGTTTGAACTC+TGG | - | chr1_2:41688448-41688467 | Msa0070810:intron | 30.0% | |
| !!! | ACTATCAAGGTTTTAAACTG+TGG | + | chr1_2:41688756-41688775 | None:intergenic | 30.0% |
| ! | ACAGTTTAAAACCTTGATAG+TGG | - | chr1_2:41688755-41688774 | Msa0070810:intron | 30.0% |
| ! | TATCTAGTGGATGAAATGAT+AGG | - | chr1_2:41688824-41688843 | Msa0070810:intron | 30.0% |
| ACTAATAGCAATCATTAGCA+AGG | - | chr1_2:41689067-41689086 | Msa0070810:intron | 30.0% | |
| TTCAATGCTCAAATATCAAG+TGG | + | chr1_2:41689258-41689277 | None:intergenic | 30.0% | |
| ! | AACACATTTAACCCTACTTT+TGG | - | chr1_2:41689364-41689383 | Msa0070810:intron | 30.0% |
| GTTTAAATTGAAATGCTTGC+AGG | - | chr1_2:41689407-41689426 | Msa0070810:intron | 30.0% | |
| ! | TCTAAAACTTTGTCAGCAAA+TGG | + | chr1_2:41689468-41689487 | None:intergenic | 30.0% |
| !! | ATGCATTCTGGAGATTTTTA+AGG | - | chr1_2:41689496-41689515 | Msa0070810:intron | 30.0% |
| AGAACTCAAATCTGATAAAG+TGG | - | chr1_2:41689676-41689695 | Msa0070810:CDS | 30.0% | |
| !!! | TAGTTTTTGGAATTCCATGT+GGG | + | chr1_2:41687897-41687916 | None:intergenic | 30.0% |
| AGTTCATGGAAAATTCAGAA+AGG | - | chr1_2:41688161-41688180 | Msa0070810:CDS | 30.0% | |
| GAAAGGTTGAGAATGAATAA+TGG | - | chr1_2:41688178-41688197 | Msa0070810:CDS | 30.0% | |
| AAGGTTGAGAATGAATAATG+GGG | - | chr1_2:41688180-41688199 | Msa0070810:CDS | 30.0% | |
| TAGAATTGAAGTTTGAACTC+TGG | - | chr1_2:41688448-41688467 | Msa0070810:intron | 30.0% | |
| !!! | ACTATCAAGGTTTTAAACTG+TGG | + | chr1_2:41688756-41688775 | None:intergenic | 30.0% |
| ! | ACAGTTTAAAACCTTGATAG+TGG | - | chr1_2:41688755-41688774 | Msa0070810:intron | 30.0% |
| ! | TATCTAGTGGATGAAATGAT+AGG | - | chr1_2:41688824-41688843 | Msa0070810:intron | 30.0% |
| ACTAATAGCAATCATTAGCA+AGG | - | chr1_2:41689067-41689086 | Msa0070810:intron | 30.0% | |
| TTCAATGCTCAAATATCAAG+TGG | + | chr1_2:41689258-41689277 | None:intergenic | 30.0% | |
| ! | AACACATTTAACCCTACTTT+TGG | - | chr1_2:41689364-41689383 | Msa0070810:intron | 30.0% |
| GTTTAAATTGAAATGCTTGC+AGG | - | chr1_2:41689407-41689426 | Msa0070810:intron | 30.0% | |
| ! | TCTAAAACTTTGTCAGCAAA+TGG | + | chr1_2:41689468-41689487 | None:intergenic | 30.0% |
| !! | ATGCATTCTGGAGATTTTTA+AGG | - | chr1_2:41689496-41689515 | Msa0070810:intron | 30.0% |
| AGAACTCAAATCTGATAAAG+TGG | - | chr1_2:41689676-41689695 | Msa0070810:CDS | 30.0% | |
| !!! | GTAGTTTTTGGAATTCCATG+TGG | + | chr1_2:41687898-41687917 | None:intergenic | 35.0% |
| !!! | TTTGGAAGATTTTGGAGTTG+TGG | + | chr1_2:41687952-41687971 | None:intergenic | 35.0% |
| CAACTCCAAAATCTTCCAAA+CGG | - | chr1_2:41687952-41687971 | Msa0070810:CDS | 35.0% | |
| !! | GGGTTTTGATAAGTAGTTCA+TGG | - | chr1_2:41688147-41688166 | Msa0070810:CDS | 35.0% |
| GTGGAACAAAGAGAGATTAT+AGG | - | chr1_2:41688387-41688406 | Msa0070810:intron | 35.0% | |
| GAAATGTAACGTAACGGTAA+TGG | - | chr1_2:41688604-41688623 | Msa0070810:intron | 35.0% | |
| ! | GTAACGGTAATGGTTTCAAA+CGG | - | chr1_2:41688614-41688633 | Msa0070810:intron | 35.0% |
| GCGAAGAAATGTAACTGATA+CGG | + | chr1_2:41688706-41688725 | None:intergenic | 35.0% | |
| AACACTCATCACTATTTCGA+TGG | + | chr1_2:41688900-41688919 | None:intergenic | 35.0% | |
| ATCGAAATAGTGATGAGTGT+TGG | - | chr1_2:41688899-41688918 | Msa0070810:intron | 35.0% | |
| !! | TATTCTTGTCACTTTGCCAA+TGG | - | chr1_2:41688977-41688996 | Msa0070810:intron | 35.0% |
| ! | TGATTGCTATTAGTACCAAC+TGG | + | chr1_2:41689061-41689080 | None:intergenic | 35.0% |
| ACAAATCAGAGCAAAAAGAC+CGG | + | chr1_2:41689724-41689743 | None:intergenic | 35.0% | |
| !! | GTCTTTTTGCTCTGATTTGT+GGG | - | chr1_2:41689724-41689743 | Msa0070810:CDS | 35.0% |
| TTGGCAAGAAATGTGCAAAA+GGG | + | chr1_2:41689880-41689899 | None:intergenic | 35.0% | |
| ATTGGCAAGAAATGTGCAAA+AGG | + | chr1_2:41689881-41689900 | None:intergenic | 35.0% | |
| !!! | GTAGTTTTTGGAATTCCATG+TGG | + | chr1_2:41687898-41687917 | None:intergenic | 35.0% |
| !!! | TTTGGAAGATTTTGGAGTTG+TGG | + | chr1_2:41687952-41687971 | None:intergenic | 35.0% |
| CAACTCCAAAATCTTCCAAA+CGG | - | chr1_2:41687952-41687971 | Msa0070810:CDS | 35.0% | |
| !! | GGGTTTTGATAAGTAGTTCA+TGG | - | chr1_2:41688147-41688166 | Msa0070810:CDS | 35.0% |
| GTGGAACAAAGAGAGATTAT+AGG | - | chr1_2:41688387-41688406 | Msa0070810:intron | 35.0% | |
| GAAATGTAACGTAACGGTAA+TGG | - | chr1_2:41688604-41688623 | Msa0070810:intron | 35.0% | |
| ! | GTAACGGTAATGGTTTCAAA+CGG | - | chr1_2:41688614-41688633 | Msa0070810:intron | 35.0% |
| GCGAAGAAATGTAACTGATA+CGG | + | chr1_2:41688706-41688725 | None:intergenic | 35.0% | |
| AACACTCATCACTATTTCGA+TGG | + | chr1_2:41688900-41688919 | None:intergenic | 35.0% | |
| ATCGAAATAGTGATGAGTGT+TGG | - | chr1_2:41688899-41688918 | Msa0070810:intron | 35.0% | |
| !! | TATTCTTGTCACTTTGCCAA+TGG | - | chr1_2:41688977-41688996 | Msa0070810:intron | 35.0% |
| ! | TGATTGCTATTAGTACCAAC+TGG | + | chr1_2:41689061-41689080 | None:intergenic | 35.0% |
| ACAAATCAGAGCAAAAAGAC+CGG | + | chr1_2:41689724-41689743 | None:intergenic | 35.0% | |
| !! | GTCTTTTTGCTCTGATTTGT+GGG | - | chr1_2:41689724-41689743 | Msa0070810:CDS | 35.0% |
| TTGGCAAGAAATGTGCAAAA+GGG | + | chr1_2:41689880-41689899 | None:intergenic | 35.0% | |
| ATTGGCAAGAAATGTGCAAA+AGG | + | chr1_2:41689881-41689900 | None:intergenic | 35.0% | |
| GACACACAAACGTTTGATGA+AGG | + | chr1_2:41687789-41687808 | None:intergenic | 40.0% | |
| AAGAAGTAGAGAGCTCCATA+AGG | + | chr1_2:41687842-41687861 | None:intergenic | 40.0% | |
| CACATTCCATAATTCCCACA+TGG | - | chr1_2:41687880-41687899 | Msa0070810:CDS | 40.0% | |
| GGAATTCCATGTGGGAATTA+TGG | + | chr1_2:41687889-41687908 | None:intergenic | 40.0% | |
| ! | CCAAACCGTTTGGAAGATTT+TGG | + | chr1_2:41687960-41687979 | None:intergenic | 40.0% |
| CCAAAATCTTCCAAACGGTT+TGG | - | chr1_2:41687957-41687976 | Msa0070810:CDS | 40.0% | |
| !! | TCCAAACGGTTTGGTTCAAT+TGG | - | chr1_2:41687966-41687985 | Msa0070810:CDS | 40.0% |
| !! | CCAAACGGTTTGGTTCAATT+GGG | - | chr1_2:41687967-41687986 | Msa0070810:CDS | 40.0% |
| AGTGTAAACCCATTTCCATC+AGG | - | chr1_2:41688045-41688064 | Msa0070810:intron | 40.0% | |
| GTGTAAACCCATTTCCATCA+GGG | - | chr1_2:41688046-41688065 | Msa0070810:intron | 40.0% | |
| ACGGAAGCAAAACGTTATGA+CGG | - | chr1_2:41688570-41688589 | Msa0070810:intron | 40.0% | |
| GGACTTTGCAAATGCAATTG+TGG | - | chr1_2:41688680-41688699 | Msa0070810:intron | 40.0% | |
| CTCTCTAACTACCACTATCA+AGG | + | chr1_2:41688769-41688788 | None:intergenic | 40.0% | |
| !! | CTTGATAGTGGTAGTTAGAG+AGG | - | chr1_2:41688767-41688786 | Msa0070810:intron | 40.0% |
| AGTCACGAAGGTAATGTTGA+TGG | - | chr1_2:41688793-41688812 | Msa0070810:intron | 40.0% | |
| !! | AAGGTAATGTTGATGGTGAG+AGG | - | chr1_2:41688800-41688819 | Msa0070810:intron | 40.0% |
| !! | TTGCCAATGGTACTGATACA+AGG | - | chr1_2:41688990-41689009 | Msa0070810:intron | 40.0% |
| !! | TGCCAATGGTACTGATACAA+GGG | - | chr1_2:41688991-41689010 | Msa0070810:intron | 40.0% |
| GGCATAAATAACTGCTGCAA+TGG | - | chr1_2:41689014-41689033 | Msa0070810:intron | 40.0% | |
| GTAACTGACGGAATAATCAG+TGG | + | chr1_2:41689307-41689326 | None:intergenic | 40.0% | |
| AAGAACCTAATGCTGTACCA+CGG | + | chr1_2:41689533-41689552 | None:intergenic | 40.0% | |
| AGCTGCAAGAAACACATTGA+TGG | + | chr1_2:41689576-41689595 | None:intergenic | 40.0% | |
| !!! | CTTTTGTTGAAAGCACTCTC+CGG | - | chr1_2:41689702-41689721 | Msa0070810:CDS | 40.0% |
| !! | GGTCTTTTTGCTCTGATTTG+TGG | - | chr1_2:41689723-41689742 | Msa0070810:CDS | 40.0% |
| ! | TTTGCTCTGATTTGTGGGAA+CGG | - | chr1_2:41689729-41689748 | Msa0070810:CDS | 40.0% |
| TGTGGGAACGGTTATATAGT+TGG | - | chr1_2:41689741-41689760 | Msa0070810:CDS | 40.0% | |
| AAGGGGACGAAAGAAAGAAA+AGG | + | chr1_2:41689862-41689881 | None:intergenic | 40.0% | |
| TGGCAAGAAATGTGCAAAAG+GGG | + | chr1_2:41689879-41689898 | None:intergenic | 40.0% | |
| GACACACAAACGTTTGATGA+AGG | + | chr1_2:41687789-41687808 | None:intergenic | 40.0% | |
| AAGAAGTAGAGAGCTCCATA+AGG | + | chr1_2:41687842-41687861 | None:intergenic | 40.0% | |
| CACATTCCATAATTCCCACA+TGG | - | chr1_2:41687880-41687899 | Msa0070810:CDS | 40.0% | |
| GGAATTCCATGTGGGAATTA+TGG | + | chr1_2:41687889-41687908 | None:intergenic | 40.0% | |
| ! | CCAAACCGTTTGGAAGATTT+TGG | + | chr1_2:41687960-41687979 | None:intergenic | 40.0% |
| CCAAAATCTTCCAAACGGTT+TGG | - | chr1_2:41687957-41687976 | Msa0070810:CDS | 40.0% | |
| !! | TCCAAACGGTTTGGTTCAAT+TGG | - | chr1_2:41687966-41687985 | Msa0070810:CDS | 40.0% |
| !! | CCAAACGGTTTGGTTCAATT+GGG | - | chr1_2:41687967-41687986 | Msa0070810:CDS | 40.0% |
| AGTGTAAACCCATTTCCATC+AGG | - | chr1_2:41688045-41688064 | Msa0070810:intron | 40.0% | |
| GTGTAAACCCATTTCCATCA+GGG | - | chr1_2:41688046-41688065 | Msa0070810:intron | 40.0% | |
| ACGGAAGCAAAACGTTATGA+CGG | - | chr1_2:41688570-41688589 | Msa0070810:intron | 40.0% | |
| GGACTTTGCAAATGCAATTG+TGG | - | chr1_2:41688680-41688699 | Msa0070810:intron | 40.0% | |
| CTCTCTAACTACCACTATCA+AGG | + | chr1_2:41688769-41688788 | None:intergenic | 40.0% | |
| !! | CTTGATAGTGGTAGTTAGAG+AGG | - | chr1_2:41688767-41688786 | Msa0070810:intron | 40.0% |
| AGTCACGAAGGTAATGTTGA+TGG | - | chr1_2:41688793-41688812 | Msa0070810:intron | 40.0% | |
| !! | AAGGTAATGTTGATGGTGAG+AGG | - | chr1_2:41688800-41688819 | Msa0070810:intron | 40.0% |
| !! | TTGCCAATGGTACTGATACA+AGG | - | chr1_2:41688990-41689009 | Msa0070810:intron | 40.0% |
| !! | TGCCAATGGTACTGATACAA+GGG | - | chr1_2:41688991-41689010 | Msa0070810:intron | 40.0% |
| GGCATAAATAACTGCTGCAA+TGG | - | chr1_2:41689014-41689033 | Msa0070810:intron | 40.0% | |
| GTAACTGACGGAATAATCAG+TGG | + | chr1_2:41689307-41689326 | None:intergenic | 40.0% | |
| AAGAACCTAATGCTGTACCA+CGG | + | chr1_2:41689533-41689552 | None:intergenic | 40.0% | |
| AGCTGCAAGAAACACATTGA+TGG | + | chr1_2:41689576-41689595 | None:intergenic | 40.0% | |
| !!! | CTTTTGTTGAAAGCACTCTC+CGG | - | chr1_2:41689702-41689721 | Msa0070810:CDS | 40.0% |
| !! | GGTCTTTTTGCTCTGATTTG+TGG | - | chr1_2:41689723-41689742 | Msa0070810:CDS | 40.0% |
| ! | TTTGCTCTGATTTGTGGGAA+CGG | - | chr1_2:41689729-41689748 | Msa0070810:CDS | 40.0% |
| TGTGGGAACGGTTATATAGT+TGG | - | chr1_2:41689741-41689760 | Msa0070810:CDS | 40.0% | |
| AAGGGGACGAAAGAAAGAAA+AGG | + | chr1_2:41689862-41689881 | None:intergenic | 40.0% | |
| TGGCAAGAAATGTGCAAAAG+GGG | + | chr1_2:41689879-41689898 | None:intergenic | 40.0% | |
| ! | AAGGTGTTCTTGCTGATGTG+GGG | + | chr1_2:41687770-41687789 | None:intergenic | 45.0% |
| !! | GAAGGTGTTCTTGCTGATGT+GGG | + | chr1_2:41687771-41687790 | None:intergenic | 45.0% |
| !! | TGAAGGTGTTCTTGCTGATG+TGG | + | chr1_2:41687772-41687791 | None:intergenic | 45.0% |
| !! | AGTGTTGCTTCAGCTCCTTA+TGG | - | chr1_2:41687824-41687843 | Msa0070810:CDS | 45.0% |
| GTTGTGGACTTAGCTGAAGT+GGG | + | chr1_2:41687936-41687955 | None:intergenic | 45.0% | |
| AGTTGTGGACTTAGCTGAAG+TGG | + | chr1_2:41687937-41687956 | None:intergenic | 45.0% | |
| CCCAATTGAACCAAACCGTT+TGG | + | chr1_2:41687970-41687989 | None:intergenic | 45.0% | |
| AACCCATTTCCATCAGGGTA+TGG | - | chr1_2:41688051-41688070 | Msa0070810:intron | 45.0% | |
| CACCATACCCTGATGGAAAT+GGG | + | chr1_2:41688056-41688075 | None:intergenic | 45.0% | |
| !! | ACAAAAGCACCATACCCTGA+TGG | + | chr1_2:41688063-41688082 | None:intergenic | 45.0% |
| ! | ACGGTAATGGTTTCAAACGG+CGG | - | chr1_2:41688617-41688636 | Msa0070810:intron | 45.0% |
| CAATTACAGCCGCAATGTCA+AGG | - | chr1_2:41688650-41688669 | Msa0070810:intron | 45.0% | |
| ! | AGCCGCAATGTCAAGGTTTT+CGG | - | chr1_2:41688657-41688676 | Msa0070810:intron | 45.0% |
| !! | GATGAGTGTTGGTGTAATGC+AGG | - | chr1_2:41688910-41688929 | Msa0070810:intron | 45.0% |
| TGTTGGTGTAATGCAGGACA+TGG | - | chr1_2:41688916-41688935 | Msa0070810:intron | 45.0% | |
| !! | TTCGGGTTGTGTTTAGGTGA+GGG | - | chr1_2:41688946-41688965 | Msa0070810:intron | 45.0% |
| !! | GCCAATGGTACTGATACAAG+GGG | - | chr1_2:41688992-41689011 | Msa0070810:intron | 45.0% |
| !! | CCAATGGTACTGATACAAGG+GGG | - | chr1_2:41688993-41689012 | Msa0070810:intron | 45.0% |
| TTAAGGCCACATACTATCCG+TGG | - | chr1_2:41689513-41689532 | Msa0070810:intron | 45.0% | |
| ACTATCCGTGGTACAGCATT+AGG | - | chr1_2:41689525-41689544 | Msa0070810:intron | 45.0% | |
| TCCTCTCGTTTACAGTGCTT+TGG | - | chr1_2:41689635-41689654 | Msa0070810:CDS | 45.0% | |
| !! | ACCAAAGCACTGTAAACGAG+AGG | + | chr1_2:41689639-41689658 | None:intergenic | 45.0% |
| ! | AAGGTGTTCTTGCTGATGTG+GGG | + | chr1_2:41687770-41687789 | None:intergenic | 45.0% |
| !! | GAAGGTGTTCTTGCTGATGT+GGG | + | chr1_2:41687771-41687790 | None:intergenic | 45.0% |
| !! | TGAAGGTGTTCTTGCTGATG+TGG | + | chr1_2:41687772-41687791 | None:intergenic | 45.0% |
| !! | AGTGTTGCTTCAGCTCCTTA+TGG | - | chr1_2:41687824-41687843 | Msa0070810:CDS | 45.0% |
| GTTGTGGACTTAGCTGAAGT+GGG | + | chr1_2:41687936-41687955 | None:intergenic | 45.0% | |
| AGTTGTGGACTTAGCTGAAG+TGG | + | chr1_2:41687937-41687956 | None:intergenic | 45.0% | |
| CCCAATTGAACCAAACCGTT+TGG | + | chr1_2:41687970-41687989 | None:intergenic | 45.0% | |
| AACCCATTTCCATCAGGGTA+TGG | - | chr1_2:41688051-41688070 | Msa0070810:intron | 45.0% | |
| CACCATACCCTGATGGAAAT+GGG | + | chr1_2:41688056-41688075 | None:intergenic | 45.0% | |
| !! | ACAAAAGCACCATACCCTGA+TGG | + | chr1_2:41688063-41688082 | None:intergenic | 45.0% |
| ! | ACGGTAATGGTTTCAAACGG+CGG | - | chr1_2:41688617-41688636 | Msa0070810:intron | 45.0% |
| CAATTACAGCCGCAATGTCA+AGG | - | chr1_2:41688650-41688669 | Msa0070810:intron | 45.0% | |
| ! | AGCCGCAATGTCAAGGTTTT+CGG | - | chr1_2:41688657-41688676 | Msa0070810:intron | 45.0% |
| !! | GATGAGTGTTGGTGTAATGC+AGG | - | chr1_2:41688910-41688929 | Msa0070810:intron | 45.0% |
| TGTTGGTGTAATGCAGGACA+TGG | - | chr1_2:41688916-41688935 | Msa0070810:intron | 45.0% | |
| !! | TTCGGGTTGTGTTTAGGTGA+GGG | - | chr1_2:41688946-41688965 | Msa0070810:intron | 45.0% |
| !! | GCCAATGGTACTGATACAAG+GGG | - | chr1_2:41688992-41689011 | Msa0070810:intron | 45.0% |
| !! | CCAATGGTACTGATACAAGG+GGG | - | chr1_2:41688993-41689012 | Msa0070810:intron | 45.0% |
| TTAAGGCCACATACTATCCG+TGG | - | chr1_2:41689513-41689532 | Msa0070810:intron | 45.0% | |
| ACTATCCGTGGTACAGCATT+AGG | - | chr1_2:41689525-41689544 | Msa0070810:intron | 45.0% | |
| TCCTCTCGTTTACAGTGCTT+TGG | - | chr1_2:41689635-41689654 | Msa0070810:CDS | 45.0% | |
| !! | ACCAAAGCACTGTAAACGAG+AGG | + | chr1_2:41689639-41689658 | None:intergenic | 45.0% |
| GAGCTGAAGCAACACTCAAC+TGG | + | chr1_2:41687820-41687839 | None:intergenic | 50.0% | |
| GCACCATACCCTGATGGAAA+TGG | + | chr1_2:41688057-41688076 | None:intergenic | 50.0% | |
| ! | GCCGCAATGTCAAGGTTTTC+GGG | - | chr1_2:41688658-41688677 | Msa0070810:intron | 50.0% |
| CCCCGAAAACCTTGACATTG+CGG | + | chr1_2:41688662-41688681 | None:intergenic | 50.0% | |
| ! | CCGCAATGTCAAGGTTTTCG+GGG | - | chr1_2:41688659-41688678 | Msa0070810:intron | 50.0% |
| GATGGTGAGAGGCTATCTAG+TGG | - | chr1_2:41688811-41688830 | Msa0070810:intron | 50.0% | |
| !! | TCGCAGTTCGGGTTGTGTTT+AGG | - | chr1_2:41688940-41688959 | Msa0070810:intron | 50.0% |
| !! | GTTCGGGTTGTGTTTAGGTG+AGG | - | chr1_2:41688945-41688964 | Msa0070810:intron | 50.0% |
| ! | TCGGGTTGTGTTTAGGTGAG+GGG | - | chr1_2:41688947-41688966 | Msa0070810:intron | 50.0% |
| GTGTTTAGGTGAGGGGACAA+TGG | - | chr1_2:41688954-41688973 | Msa0070810:intron | 50.0% | |
| CCCCCTTGTATCAGTACCAT+TGG | + | chr1_2:41688996-41689015 | None:intergenic | 50.0% | |
| GCTGTACCACGGATAGTATG+TGG | + | chr1_2:41689522-41689541 | None:intergenic | 50.0% | |
| GAGCTGAAGCAACACTCAAC+TGG | + | chr1_2:41687820-41687839 | None:intergenic | 50.0% | |
| GCACCATACCCTGATGGAAA+TGG | + | chr1_2:41688057-41688076 | None:intergenic | 50.0% | |
| ! | GCCGCAATGTCAAGGTTTTC+GGG | - | chr1_2:41688658-41688677 | Msa0070810:intron | 50.0% |
| CCCCGAAAACCTTGACATTG+CGG | + | chr1_2:41688662-41688681 | None:intergenic | 50.0% | |
| ! | CCGCAATGTCAAGGTTTTCG+GGG | - | chr1_2:41688659-41688678 | Msa0070810:intron | 50.0% |
| GATGGTGAGAGGCTATCTAG+TGG | - | chr1_2:41688811-41688830 | Msa0070810:intron | 50.0% | |
| !! | TCGCAGTTCGGGTTGTGTTT+AGG | - | chr1_2:41688940-41688959 | Msa0070810:intron | 50.0% |
| !! | GTTCGGGTTGTGTTTAGGTG+AGG | - | chr1_2:41688945-41688964 | Msa0070810:intron | 50.0% |
| ! | TCGGGTTGTGTTTAGGTGAG+GGG | - | chr1_2:41688947-41688966 | Msa0070810:intron | 50.0% |
| GTGTTTAGGTGAGGGGACAA+TGG | - | chr1_2:41688954-41688973 | Msa0070810:intron | 50.0% | |
| CCCCCTTGTATCAGTACCAT+TGG | + | chr1_2:41688996-41689015 | None:intergenic | 50.0% | |
| GCTGTACCACGGATAGTATG+TGG | + | chr1_2:41689522-41689541 | None:intergenic | 50.0% | |
| GTGGACTTAGCTGAAGTGGG+TGG | + | chr1_2:41687933-41687952 | None:intergenic | 55.0% | |
| ! | TTAGAGAGGCGCAGTCACGA+AGG | - | chr1_2:41688781-41688800 | Msa0070810:intron | 55.0% |
| GCAGGACATGGTTCGCAGTT+CGG | - | chr1_2:41688928-41688947 | Msa0070810:intron | 55.0% | |
| CAGGACATGGTTCGCAGTTC+GGG | - | chr1_2:41688929-41688948 | Msa0070810:intron | 55.0% | |
| TTGCAGGCCTGCAGTGAAGT+TGG | - | chr1_2:41689423-41689442 | Msa0070810:intron | 55.0% | |
| AGCAGCTCCAACTTCACTGC+AGG | + | chr1_2:41689433-41689452 | None:intergenic | 55.0% | |
| TGCAGTGAAGTTGGAGCTGC+TGG | - | chr1_2:41689432-41689451 | Msa0070810:intron | 55.0% | |
| GTGGACTTAGCTGAAGTGGG+TGG | + | chr1_2:41687933-41687952 | None:intergenic | 55.0% | |
| ! | TTAGAGAGGCGCAGTCACGA+AGG | - | chr1_2:41688781-41688800 | Msa0070810:intron | 55.0% |
| GCAGGACATGGTTCGCAGTT+CGG | - | chr1_2:41688928-41688947 | Msa0070810:intron | 55.0% | |
| CAGGACATGGTTCGCAGTTC+GGG | - | chr1_2:41688929-41688948 | Msa0070810:intron | 55.0% | |
| TTGCAGGCCTGCAGTGAAGT+TGG | - | chr1_2:41689423-41689442 | Msa0070810:intron | 55.0% | |
| AGCAGCTCCAACTTCACTGC+AGG | + | chr1_2:41689433-41689452 | None:intergenic | 55.0% | |
| TGCAGTGAAGTTGGAGCTGC+TGG | - | chr1_2:41689432-41689451 | Msa0070810:intron | 55.0% | |
| TTACCGGACACGTGTGTGCG+TGG | - | chr1_2:41688368-41688387 | Msa0070810:intron | 60.0% | |
| GTTCCACGCACACACGTGTC+CGG | + | chr1_2:41688374-41688393 | None:intergenic | 60.0% | |
| TTACCGGACACGTGTGTGCG+TGG | - | chr1_2:41688368-41688387 | Msa0070810:intron | 60.0% | |
| GTTCCACGCACACACGTGTC+CGG | + | chr1_2:41688374-41688393 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 41687751 | 41689920 | 41687751 | ID=Msa0070810;Name=Msa0070810 |
| chr1_2 | mRNA | 41687751 | 41689920 | 41687751 | ID=Msa0070810-mRNA-1;Parent=Msa0070810;Name=Msa0070810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=92|1|0.66|1|1|1|3|0|206 |
| chr1_2 | exon | 41687751 | 41688021 | 41687751 | ID=Msa0070810-mRNA-1:exon:12804;Parent=Msa0070810-mRNA-1 |
| chr1_2 | exon | 41688118 | 41688242 | 41688118 | ID=Msa0070810-mRNA-1:exon:12803;Parent=Msa0070810-mRNA-1 |
| chr1_2 | exon | 41689604 | 41689920 | 41689604 | ID=Msa0070810-mRNA-1:exon:12802;Parent=Msa0070810-mRNA-1 |
| chr1_2 | five_prime_UTR | 41689829 | 41689920 | 41689829 | ID=Msa0070810-mRNA-1:five_prime_utr;Parent=Msa0070810-mRNA-1 |
| chr1_2 | CDS | 41689604 | 41689828 | 41689604 | ID=Msa0070810-mRNA-1:cds;Parent=Msa0070810-mRNA-1 |
| chr1_2 | CDS | 41688118 | 41688242 | 41688118 | ID=Msa0070810-mRNA-1:cds;Parent=Msa0070810-mRNA-1 |
| chr1_2 | CDS | 41687751 | 41688021 | 41687751 | ID=Msa0070810-mRNA-1:cds;Parent=Msa0070810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
