Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049910 | XP_003621414.1 | 95.445 | 461 | 10 | 6 | 1 | 455 | 1 | 456 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049910 | sp|Q5XVC4|MDP60_ARATH | 50.104 | 479 | 179 | 15 | 17 | 454 | 23 | 482 | 6.22e-121 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049910 | G7L582 | 95.445 | 461 | 10 | 6 | 1 | 455 | 1 | 456 | 0.0 | 858 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016530 | Msa1049910 | 0.816930 | 4.289061e-52 | -8.615850e-47 |
| Msa0030070 | Msa1049910 | 0.822514 | 2.273909e-53 | -8.615850e-47 |
| Msa0032980 | Msa1049910 | 0.824577 | 7.485699e-54 | -8.615850e-47 |
| Msa0050150 | Msa1049910 | 0.869465 | 3.034388e-66 | -8.615850e-47 |
| Msa0062340 | Msa1049910 | 0.802654 | 5.062517e-49 | -8.615850e-47 |
| Msa0074360 | Msa1049910 | 0.817078 | 3.974040e-52 | -8.615850e-47 |
| Msa0078130 | Msa1049910 | 0.833254 | 5.926999e-56 | -8.615850e-47 |
| Msa0091350 | Msa1049910 | 0.841438 | 4.751016e-58 | -8.615850e-47 |
| Msa0100600 | Msa1049910 | 0.833955 | 3.960049e-56 | -8.615850e-47 |
| Msa0100890 | Msa1049910 | 0.807506 | 4.888443e-50 | -8.615850e-47 |
| Msa0106630 | Msa1049910 | 0.843681 | 1.206431e-58 | -8.615850e-47 |
| Msa0607800 | Msa1049910 | 0.809104 | 2.231323e-50 | -8.615850e-47 |
| Msa0615630 | Msa1049910 | 0.802060 | 6.710068e-49 | -8.615850e-47 |
| Msa0618990 | Msa1049910 | 0.820806 | 5.647023e-53 | -8.615850e-47 |
| Msa0620500 | Msa1049910 | 0.847674 | 9.960806e-60 | -8.615850e-47 |
| Msa0620510 | Msa1049910 | 0.856217 | 3.735173e-62 | -8.615850e-47 |
| Msa0621320 | Msa1049910 | 0.807613 | 4.640258e-50 | -8.615850e-47 |
| Msa0625620 | Msa1049910 | 0.836318 | 1.004011e-56 | -8.615850e-47 |
| Msa0630440 | Msa1049910 | 0.808786 | 2.609388e-50 | -8.615850e-47 |
| Msa0640800 | Msa1049910 | 0.820653 | 6.123608e-53 | -8.615850e-47 |
| Msa0642550 | Msa1049910 | 0.800940 | 1.138364e-48 | -8.615850e-47 |
| Msa0647440 | Msa1049910 | 0.830951 | 2.198996e-55 | -8.615850e-47 |
| Msa0648040 | Msa1049910 | 0.821322 | 4.294138e-53 | -8.615850e-47 |
| Msa0648760 | Msa1049910 | 0.811432 | 7.020638e-51 | -8.615850e-47 |
| Msa0688380 | Msa1049910 | 0.817141 | 3.846691e-52 | -8.615850e-47 |
| Msa0690320 | Msa1049910 | 0.809381 | 1.945970e-50 | -8.615850e-47 |
| Msa0690740 | Msa1049910 | 0.818328 | 2.075648e-52 | -8.615850e-47 |
| Msa0707260 | Msa1049910 | 0.851218 | 1.023989e-60 | -8.615850e-47 |
| Msa0708980 | Msa1049910 | 0.801432 | 9.030551e-49 | -8.615850e-47 |
| Msa0717900 | Msa1049910 | 0.835195 | 1.932499e-56 | -8.615850e-47 |
| Msa0720280 | Msa1049910 | 0.829935 | 3.895405e-55 | -8.615850e-47 |
| Msa0803140 | Msa1049910 | 0.837665 | 4.544606e-57 | -8.615850e-47 |
| Msa0816080 | Msa1049910 | 0.839004 | 2.052894e-57 | -8.615850e-47 |
| Msa0837680 | Msa1049910 | 0.815589 | 8.556708e-52 | -8.615850e-47 |
| Msa0841500 | Msa1049910 | 0.823840 | 1.115105e-53 | -8.615850e-47 |
| Msa0123320 | Msa1049910 | 0.812238 | 4.688023e-51 | -8.615850e-47 |
| Msa0125590 | Msa1049910 | 0.833837 | 4.239448e-56 | -8.615850e-47 |
| Msa0127340 | Msa1049910 | 0.836216 | 1.065350e-56 | -8.615850e-47 |
| Msa0153210 | Msa1049910 | 0.839873 | 1.221368e-57 | -8.615850e-47 |
| Msa0156090 | Msa1049910 | 0.807351 | 5.274597e-50 | -8.615850e-47 |
| Msa0165830 | Msa1049910 | 0.805302 | 1.425724e-49 | -8.615850e-47 |
| Msa0168050 | Msa1049910 | 0.814445 | 1.535117e-51 | -8.615850e-47 |
| Msa0168380 | Msa1049910 | 0.806436 | 8.235000e-50 | -8.615850e-47 |
| Msa0170070 | Msa1049910 | 0.800332 | 1.514587e-48 | -8.615850e-47 |
| Msa0204970 | Msa1049910 | 0.812773 | 3.580859e-51 | -8.615850e-47 |
| Msa0236820 | Msa1049910 | 0.823564 | 1.293887e-53 | -8.615850e-47 |
| Msa0364680 | Msa1049910 | 0.826409 | 2.755762e-54 | -8.615850e-47 |
| Msa0373170 | Msa1049910 | 0.828339 | 9.496677e-55 | -8.615850e-47 |
| Msa0373500 | Msa1049910 | 0.807403 | 5.142098e-50 | -8.615850e-47 |
| Msa0373590 | Msa1049910 | 0.800131 | 1.664005e-48 | -8.615850e-47 |
| Msa0382230 | Msa1049910 | 0.807277 | 5.467151e-50 | -8.615850e-47 |
| Msa0404770 | Msa1049910 | 0.800870 | 1.176520e-48 | -8.615850e-47 |
| Msa0415820 | Msa1049910 | 0.816816 | 4.549149e-52 | -8.615850e-47 |
| Msa0421130 | Msa1049910 | 0.815758 | 7.843981e-52 | -8.615850e-47 |
| Msa0421750 | Msa1049910 | 0.810967 | 8.855596e-51 | -8.615850e-47 |
| Msa0433630 | Msa1049910 | 0.831645 | 1.484167e-55 | -8.615850e-47 |
| Msa0433760 | Msa1049910 | 0.801661 | 8.102594e-49 | -8.615850e-47 |
| Msa0456670 | Msa1049910 | 0.823069 | 1.689222e-53 | -8.615850e-47 |
| Msa0458100 | Msa1049910 | 0.801748 | 7.778238e-49 | -8.615850e-47 |
| Msa0466880 | Msa1049910 | 0.805972 | 1.031312e-49 | -8.615850e-47 |
| Msa0467690 | Msa1049910 | 0.826467 | 2.669926e-54 | -8.615850e-47 |
| Msa0468620 | Msa1049910 | 0.833095 | 6.491334e-56 | -8.615850e-47 |
| Msa0468700 | Msa1049910 | 0.808532 | 2.957735e-50 | -8.615850e-47 |
| Msa0477630 | Msa1049910 | 0.817913 | 2.576236e-52 | -8.615850e-47 |
| Msa1000780 | Msa1049910 | 0.818361 | 2.040055e-52 | -8.615850e-47 |
| Msa1008260 | Msa1049910 | 0.906560 | 1.302575e-80 | -8.615850e-47 |
| Msa1008670 | Msa1049910 | 0.805136 | 1.544388e-49 | -8.615850e-47 |
| Msa1008680 | Msa1049910 | 0.803250 | 3.813147e-49 | -8.615850e-47 |
| Msa1049910 | Msa1074150 | 0.815668 | 8.216246e-52 | -8.615850e-47 |
| Msa1049910 | Msa1076020 | 0.814440 | 1.538714e-51 | -8.615850e-47 |
| Msa1049910 | Msa1078860 | 0.815132 | 1.081315e-51 | -8.615850e-47 |
| Msa1049910 | Msa1078990 | 0.809798 | 1.583735e-50 | -8.615850e-47 |
| Msa1049910 | Msa1127280 | 0.815773 | 7.784663e-52 | -8.615850e-47 |
| Msa1049910 | Msa1163180 | 0.826187 | 3.113790e-54 | -8.615850e-47 |
| Msa1049910 | Msa1165480 | 0.819929 | 8.971785e-53 | -8.615850e-47 |
| Msa1049910 | Msa1169170 | 0.803364 | 3.611404e-49 | -8.615850e-47 |
| Msa1049910 | Msa1169690 | 0.826204 | 3.083853e-54 | -8.615850e-47 |
| Msa1049910 | Msa1213830 | 0.801348 | 9.394764e-49 | -8.615850e-47 |
| Msa1049910 | Msa1215980 | 0.847450 | 1.147902e-59 | -8.615850e-47 |
| Msa1049910 | Msa1215990 | 0.857418 | 1.654529e-62 | -8.615850e-47 |
| Msa1049910 | Msa1223390 | 0.802176 | 6.351080e-49 | -8.615850e-47 |
| Msa1049910 | Msa1254100 | 0.800210 | 1.603934e-48 | -8.615850e-47 |
| Msa1049910 | Msa1254420 | 0.824693 | 7.030165e-54 | -8.615850e-47 |
| Msa1049910 | Msa1254540 | 0.823351 | 1.451257e-53 | -8.615850e-47 |
| Msa1049910 | Msa1277110 | 0.805600 | 1.234355e-49 | -8.615850e-47 |
| Msa1049910 | Msa1282300 | 0.811748 | 5.993589e-51 | -8.615850e-47 |
| Msa1049910 | Msa1294280 | 0.806848 | 6.738942e-50 | -8.615850e-47 |
| Msa1049910 | Msa1294460 | 0.817866 | 2.640715e-52 | -8.615850e-47 |
| Msa1049910 | Msa1294790 | 0.827682 | 1.367256e-54 | -8.615850e-47 |
| Msa1049910 | Msa1301820 | 0.853143 | 2.902723e-61 | -8.615850e-47 |
| Msa1049910 | Msa1301830 | 0.846122 | 2.648706e-59 | -8.615850e-47 |
| Msa1049910 | Msa1306570 | 0.800088 | 1.698212e-48 | -8.615850e-47 |
| Msa1049910 | Msa1315500 | 0.806428 | 8.266255e-50 | -8.615850e-47 |
| Msa1049910 | Msa1332950 | 0.808340 | 3.249984e-50 | -8.615850e-47 |
| Msa1049910 | Msa1339230 | 0.800769 | 1.234041e-48 | -8.615850e-47 |
| Msa1049910 | Msa1374790 | 0.801621 | 8.257717e-49 | -8.615850e-47 |
| Msa1049910 | Msa1387500 | 0.812287 | 4.574125e-51 | -8.615850e-47 |
| Msa1049910 | Msa1393560 | 0.833867 | 4.165968e-56 | -8.615850e-47 |
| Msa1049910 | Msa1399190 | 0.802690 | 4.977389e-49 | -8.615850e-47 |
| Msa1049910 | Msa1426320 | 0.830829 | 2.355746e-55 | -8.615850e-47 |
| Msa1049910 | Msa1432520 | 0.815726 | 7.976201e-52 | -8.615850e-47 |
| Msa1049910 | Msa1435100 | 0.803838 | 2.878958e-49 | -8.615850e-47 |
| Msa1049910 | Msa1439730 | 0.808849 | 2.530051e-50 | -8.615850e-47 |
| Msa1049910 | Msa1451820 | 0.802976 | 4.343669e-49 | -8.615850e-47 |
| Msa1049910 | Msa1461260 | 0.807567 | 4.745530e-50 | -8.615850e-47 |
| Msa0249870 | Msa1049910 | 0.815199 | 1.044820e-51 | -8.615850e-47 |
| Msa0281540 | Msa1049910 | 0.802976 | 4.345044e-49 | -8.615850e-47 |
| Msa0314870 | Msa1049910 | 0.808973 | 2.379980e-50 | -8.615850e-47 |
| Msa0507920 | Msa1049910 | 0.806702 | 7.236610e-50 | -8.615850e-47 |
| Msa0512530 | Msa1049910 | 0.800109 | 1.681636e-48 | -8.615850e-47 |
| Msa0513640 | Msa1049910 | 0.840857 | 6.754280e-58 | -8.615850e-47 |
| Msa0514020 | Msa1049910 | 0.824625 | 7.292693e-54 | -8.615850e-47 |
| Msa0514500 | Msa1049910 | 0.833265 | 5.889277e-56 | -8.615850e-47 |
| Msa0520680 | Msa1049910 | 0.803545 | 3.313063e-49 | -8.615850e-47 |
| Msa0520870 | Msa1049910 | 0.803471 | 3.432311e-49 | -8.615850e-47 |
| Msa0521510 | Msa1049910 | 0.832653 | 8.361879e-56 | -8.615850e-47 |
| Msa0521530 | Msa1049910 | 0.813125 | 2.998762e-51 | -8.615850e-47 |
| Msa0527850 | Msa1049910 | 0.822123 | 2.803709e-53 | -8.615850e-47 |
| Msa0544410 | Msa1049910 | 0.815940 | 7.143830e-52 | -8.615850e-47 |
| Msa0544430 | Msa1049910 | 0.801710 | 7.920075e-49 | -8.615850e-47 |
| Msa0554300 | Msa1049910 | 0.824137 | 9.499100e-54 | -8.615850e-47 |
| Msa0559100 | Msa1049910 | 0.806973 | 6.342883e-50 | -8.615850e-47 |
| Msa0561560 | Msa1049910 | 0.810651 | 1.036980e-50 | -8.615850e-47 |
| Msa0572830 | Msa1049910 | 0.832182 | 1.093704e-55 | -8.615850e-47 |
| Msa0582460 | Msa1049910 | 0.816392 | 5.663617e-52 | -8.615850e-47 |
| Msa0584530 | Msa1049910 | 0.803215 | 3.876816e-49 | -8.615850e-47 |
| Msa0586200 | Msa1049910 | 0.814817 | 1.269973e-51 | -8.615850e-47 |
| Msa0861440 | Msa1049910 | 0.847074 | 1.455177e-59 | -8.615850e-47 |
| Msa0866530 | Msa1049910 | 0.801016 | 1.098650e-48 | -8.615850e-47 |
| Msa0879920 | Msa1049910 | 0.817963 | 2.510044e-52 | -8.615850e-47 |
| Msa0900090 | Msa1049910 | 0.807858 | 4.115378e-50 | -8.615850e-47 |
| Msa0945900 | Msa1049910 | 0.801761 | 7.731677e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049910 | MtrunA17_Chr7g0218721 | 95.445 | 461 | 10 | 6 | 1 | 455 | 1 | 456 | 0.0 | 858 |
| Msa1049910 | MtrunA17_Chr6g0454541 | 48.606 | 502 | 164 | 15 | 23 | 455 | 8 | 484 | 4.51e-124 | 369 |
| Msa1049910 | MtrunA17_Chr3g0109961 | 44.828 | 116 | 61 | 2 | 335 | 449 | 49 | 162 | 6.05e-23 | 95.5 |
| Msa1049910 | MtrunA17_Chr4g0051971 | 43.103 | 116 | 63 | 2 | 335 | 449 | 9 | 122 | 7.60e-21 | 88.2 |
| Msa1049910 | MtrunA17_Chr4g0040361 | 28.696 | 230 | 102 | 5 | 279 | 447 | 518 | 746 | 3.65e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1049910 | AT5G15510.1 | 52.000 | 475 | 174 | 14 | 6 | 435 | 11 | 476 | 1.70e-140 | 412 |
| Msa1049910 | AT5G15510.4 | 51.991 | 452 | 167 | 13 | 6 | 416 | 11 | 453 | 3.34e-133 | 392 |
| Msa1049910 | AT5G15510.3 | 51.991 | 452 | 167 | 13 | 6 | 416 | 11 | 453 | 3.34e-133 | 392 |
| Msa1049910 | AT5G15510.2 | 51.991 | 452 | 167 | 13 | 6 | 416 | 11 | 453 | 3.10e-132 | 392 |
| Msa1049910 | AT3G01015.1 | 50.104 | 479 | 179 | 15 | 17 | 454 | 23 | 482 | 6.32e-122 | 364 |
| Msa1049910 | AT5G37478.4 | 48.454 | 97 | 50 | 0 | 333 | 429 | 36 | 132 | 2.37e-22 | 93.6 |
| Msa1049910 | AT5G37478.1 | 48.454 | 97 | 50 | 0 | 333 | 429 | 56 | 152 | 3.30e-22 | 94.0 |
| Msa1049910 | AT5G37478.2 | 43.363 | 113 | 57 | 1 | 333 | 445 | 23 | 128 | 1.01e-21 | 91.7 |
| Msa1049910 | AT1G03780.2 | 29.327 | 208 | 88 | 3 | 281 | 429 | 522 | 729 | 2.03e-17 | 85.5 |
| Msa1049910 | AT1G03780.3 | 29.327 | 208 | 88 | 3 | 281 | 429 | 522 | 729 | 2.28e-17 | 85.5 |
Find 131 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTCTGTTTCTTCTTCT+TGG | 0.155336 | 7_2:+13538506 | Msa1049910:CDS |
| GAATTTCCTTCGCCGGATTT+TGG | 0.169369 | 7_2:-13537972 | None:intergenic |
| AGAGAGAATGATGATGTTTC+TGG | 0.200384 | 7_2:+13538424 | Msa1049910:CDS |
| GAACAAGAAGGAGGAGTATT+AGG | 0.207178 | 7_2:-13537899 | None:intergenic |
| TTTGGGTGTTTGCTGAATTC+TGG | 0.208225 | 7_2:-13537858 | None:intergenic |
| ACAACTACATTATCAATTTC+AGG | 0.212730 | 7_2:-13538208 | None:intergenic |
| TCCTCACCTCCTTGGGATAA+AGG | 0.244906 | 7_2:-13542480 | None:intergenic |
| CTTCATAGAGCAATATAAAT+TGG | 0.265056 | 7_2:+13542264 | Msa1049910:CDS |
| TATGGCATAGGTTGTGCTTT+TGG | 0.268988 | 7_2:-13542446 | None:intergenic |
| AGAGAGAGTGTAACACAAAT+TGG | 0.273412 | 7_2:+13538307 | Msa1049910:CDS |
| TGATGGTGGTGATGGTGATT+CGG | 0.275134 | 7_2:+13538042 | Msa1049910:CDS |
| TGCTTCTGTTTCTTCTTCTT+GGG | 0.275677 | 7_2:+13538507 | Msa1049910:CDS |
| GTTTACATTCTCAGTGTGTT+TGG | 0.293505 | 7_2:-13537876 | None:intergenic |
| CAAAGCCTGTGCAACTAAAT+TGG | 0.295518 | 7_2:-13542791 | None:intergenic |
| GAAAGAGGGTGATGTGGGTT+TGG | 0.306741 | 7_2:+13538240 | Msa1049910:CDS |
| ATAAAGGGTCGGTCGAAATA+TGG | 0.329539 | 7_2:-13542464 | None:intergenic |
| GTTTGAGGGGAATTAGGGTT+AGG | 0.333059 | 7_2:-13537950 | None:intergenic |
| GATGGTGGTGATGGTGATTC+GGG | 0.339483 | 7_2:+13538043 | Msa1049910:CDS |
| AAAGAGGGTGATGTGGGTTT+GGG | 0.339781 | 7_2:+13538241 | Msa1049910:CDS |
| CAATTTAGTTGCACAGGCTT+TGG | 0.340388 | 7_2:+13542792 | Msa1049910:three_prime_UTR |
| ATTAATATCAAAATGTATCT+TGG | 0.342690 | 7_2:-13542703 | None:intergenic |
| GTTCGAAGCTTGAAAGGTTC+TGG | 0.353153 | 7_2:-13541259 | None:intergenic |
| GTCAGGGAAGGTTCAGAGTT+TGG | 0.356185 | 7_2:+13538330 | Msa1049910:CDS |
| CTTGACCTTCTTATGAAACT+TGG | 0.358432 | 7_2:-13542609 | None:intergenic |
| TTTACATTCTCAGTGTGTTT+GGG | 0.361884 | 7_2:-13537875 | None:intergenic |
| CAAGGAAGACCTTGTGCAAC+AGG | 0.373355 | 7_2:-13541495 | None:intergenic |
| AGCACGCGGTGTGGTTGTTC+CGG | 0.379453 | 7_2:-13537825 | None:intergenic |
| AATGTGTTTGTGTAGCTTAT+CGG | 0.392519 | 7_2:+13538107 | Msa1049910:CDS |
| CCTCACCTCCTTGGGATAAA+GGG | 0.396315 | 7_2:-13542479 | None:intergenic |
| CTGTTGCACAAGGTCTTCCT+TGG | 0.397605 | 7_2:+13541496 | Msa1049910:CDS |
| TCTGTTTCTTCTTCTTGGGA+TGG | 0.399475 | 7_2:+13538511 | Msa1049910:CDS |
| GCACATCAGTATGAAGCTTC+AGG | 0.399654 | 7_2:-13541722 | None:intergenic |
| AGAGAAGTAGAGAGAGATTG+AGG | 0.402924 | 7_2:+13538275 | Msa1049910:CDS |
| AACAAGAAGGAGGAGTATTA+GGG | 0.402952 | 7_2:-13537898 | None:intergenic |
| GAATCAACAACCACCACTCT+TGG | 0.407987 | 7_2:+13541193 | Msa1049910:CDS |
| AGAAGAGGTATTTGAACAAA+AGG | 0.423982 | 7_2:+13541434 | Msa1049910:CDS |
| GTATGAAGCTTCAGGTCAAC+AGG | 0.431022 | 7_2:-13541714 | None:intergenic |
| TTTGAGGGGAATTAGGGTTA+GGG | 0.431508 | 7_2:-13537949 | None:intergenic |
| GAAGGTTCAGAGTTTGGTTA+AGG | 0.432189 | 7_2:+13538336 | Msa1049910:CDS |
| GTAATTGTAAAGAGAAGAAT+AGG | 0.432522 | 7_2:+13538083 | Msa1049910:CDS |
| TCATACTGATGTGCGGGCGC+TGG | 0.436040 | 7_2:+13541731 | Msa1049910:CDS |
| AATCAACAACCACCACTCTT+GGG | 0.438310 | 7_2:+13541194 | Msa1049910:CDS |
| TTAATATCAAAATGTATCTT+GGG | 0.442447 | 7_2:-13542702 | None:intergenic |
| TTGACCTTCTTATGAAACTT+GGG | 0.444865 | 7_2:-13542608 | None:intergenic |
| TTGATAAGTCTAATGAATTG+AGG | 0.446080 | 7_2:-13542858 | None:intergenic |
| TAGATCAATCCTCACCTCCT+TGG | 0.457853 | 7_2:-13542488 | None:intergenic |
| AGATCAATCCTCACCTCCTT+GGG | 0.458607 | 7_2:-13542487 | None:intergenic |
| GTTGAAAGAATCGGCGATGA+TGG | 0.459557 | 7_2:-13537682 | None:intergenic |
| AATTCAACACTATTCAGAAA+AGG | 0.462770 | 7_2:-13542754 | None:intergenic |
| TCAATCGCCACCACTTTCTC+CGG | 0.464737 | 7_2:+13537781 | Msa1049910:five_prime_UTR |
| AGTGTAACACAAATTGGGTC+AGG | 0.465959 | 7_2:+13538313 | Msa1049910:CDS |
| AGCAACCAATTTAGTTGCAC+AGG | 0.475995 | 7_2:+13542786 | Msa1049910:three_prime_UTR |
| AGTTGAGGCAGGAGGAGTAT+TGG | 0.478722 | 7_2:-13542673 | None:intergenic |
| TAGAGAGAGATTGAGGGAGG+AGG | 0.478864 | 7_2:+13538282 | Msa1049910:CDS |
| CGAAGGAAATTCGTGGTTGT+GGG | 0.478980 | 7_2:+13537983 | Msa1049910:CDS |
| ATTCAACACTATTCAGAAAA+GGG | 0.479901 | 7_2:-13542753 | None:intergenic |
| GGTATTGTAATTTCTTTGAC+CGG | 0.481455 | 7_2:-13541693 | None:intergenic |
| AATTGCAGCTTGACATCTAA+AGG | 0.482384 | 7_2:+13541051 | Msa1049910:intron |
| ATAAAATGTTGTGTTACTGC+TGG | 0.482639 | 7_2:+13542880 | Msa1049910:three_prime_UTR |
| GAGAAGTAGAGAGAGATTGA+GGG | 0.487312 | 7_2:+13538276 | Msa1049910:CDS |
| GCGAAGGAAATTCGTGGTTG+TGG | 0.487371 | 7_2:+13537982 | Msa1049910:CDS |
| CAGAAGGAAGATGTGAAGGA+AGG | 0.491151 | 7_2:+13538016 | Msa1049910:CDS |
| ACAGTGTTTGGCAAAACCTC+CGG | 0.491803 | 7_2:+13541674 | Msa1049910:intron |
| GACGTCTCAGAATCTTGGGT+TGG | 0.495055 | 7_2:+13538477 | Msa1049910:CDS |
| AGAAGGAAGATGTGAAGGAA+GGG | 0.496623 | 7_2:+13538017 | Msa1049910:CDS |
| GACATGTTCGCCGGAGAAAG+TGG | 0.502746 | 7_2:-13537791 | None:intergenic |
| TTGGGAAGCTTAGTTGAGGC+AGG | 0.504468 | 7_2:-13542684 | None:intergenic |
| CAACCACGAATTTCCTTCGC+CGG | 0.505033 | 7_2:-13537979 | None:intergenic |
| TGATGATGAAGATGGAAAAG+AGG | 0.506207 | 7_2:+13538390 | Msa1049910:CDS |
| AGAGCAATATAAATTGGAAA+AGG | 0.507125 | 7_2:+13542270 | Msa1049910:CDS |
| CTTGGGATGGATCTCGTGGA+AGG | 0.508275 | 7_2:+13538524 | Msa1049910:CDS |
| AGTGTTATAGTTGAAAGAAT+CGG | 0.509202 | 7_2:-13537691 | None:intergenic |
| GAAGCTTGAAAGGTTCTGGC+CGG | 0.510027 | 7_2:-13541255 | None:intergenic |
| GCAGCAGCAGCTCATCGTCA+TGG | 0.511172 | 7_2:+13542639 | Msa1049910:CDS |
| GAGAGAGTGTAACACAAATT+GGG | 0.511240 | 7_2:+13538308 | Msa1049910:CDS |
| GAAACAGAAGGAAGATGTGA+AGG | 0.511692 | 7_2:+13538012 | Msa1049910:CDS |
| ATTCCCCTCAAACCAAAATC+CGG | 0.514254 | 7_2:+13537960 | Msa1049910:CDS |
| TGATGGTGATTCGGGTTCAA+AGG | 0.515310 | 7_2:+13538051 | Msa1049910:CDS |
| TCTAATGAATTGAGGAATCT+CGG | 0.517374 | 7_2:-13542850 | None:intergenic |
| GAAGGAAGATGTGAAGGAAG+GGG | 0.517993 | 7_2:+13538018 | Msa1049910:CDS |
| CTAAAGGAGGTAGAAGTAGC+AGG | 0.518096 | 7_2:+13541067 | Msa1049910:CDS |
| CCGTGCTGAGTTTGATGAGC+AGG | 0.519569 | 7_2:+13541755 | Msa1049910:CDS |
| AAGGAAGATGTGAAGGAAGG+GGG | 0.526247 | 7_2:+13538019 | Msa1049910:CDS |
| AAACAGAAAGAGGGTGATGT+GGG | 0.528180 | 7_2:+13538235 | Msa1049910:CDS |
| TGAAGATGGAAAAGAGGAGA+AGG | 0.529607 | 7_2:+13538396 | Msa1049910:CDS |
| AAGAGGAAAGGTTAAAGAAG+AGG | 0.529614 | 7_2:+13541419 | Msa1049910:CDS |
| GAAAGTGGTGGCGATTGAAT+CGG | 0.531695 | 7_2:-13537776 | None:intergenic |
| GAAGCTTCATACTGATGTGC+GGG | 0.536394 | 7_2:+13541725 | Msa1049910:CDS |
| AAGCTTGAAAGGTTCTGGCC+GGG | 0.543128 | 7_2:-13541254 | None:intergenic |
| TGACCTTCTTATGAAACTTG+GGG | 0.556484 | 7_2:-13542607 | None:intergenic |
| AAGTAGAGAGAGATTGAGGG+AGG | 0.568191 | 7_2:+13538279 | Msa1049910:CDS |
| ACATCAGTTCGAAGCTTGAA+AGG | 0.569115 | 7_2:-13541265 | None:intergenic |
| TCTTCTTGGGATGGATCTCG+TGG | 0.569991 | 7_2:+13538520 | Msa1049910:CDS |
| ATGAATTGAGGAATCTCGGC+GGG | 0.573164 | 7_2:-13542846 | None:intergenic |
| ATCAACAACCACCACTCTTG+GGG | 0.574386 | 7_2:+13541195 | Msa1049910:CDS |
| TCGACCGACCCTTTATCCCA+AGG | 0.575180 | 7_2:+13542471 | Msa1049910:CDS |
| ACCTCCTTGGGATAAAGGGT+CGG | 0.579945 | 7_2:-13542475 | None:intergenic |
| CTCAAACCAAAATCCGGCGA+AGG | 0.589037 | 7_2:+13537966 | Msa1049910:CDS |
| CAAAGGATTCCTGTTGCACA+AGG | 0.590082 | 7_2:+13541486 | Msa1049910:CDS |
| GGAAGCTTAGTTGAGGCAGG+AGG | 0.596438 | 7_2:-13542681 | None:intergenic |
| AAGAAGAAATCAAAAGATTG+CGG | 0.597999 | 7_2:+13542411 | Msa1049910:CDS |
| TCAGGTTCATCTGTTGTCCA+AGG | 0.603985 | 7_2:-13541513 | None:intergenic |
| AGACAGAAGAAGAGAAACAA+AGG | 0.605535 | 7_2:+13541469 | Msa1049910:CDS |
| AATCCGGCGAAGGAAATTCG+TGG | 0.605642 | 7_2:+13537976 | Msa1049910:CDS |
| ATTAATGTAGCAAAGAGGAA+AGG | 0.607260 | 7_2:+13541407 | Msa1049910:intron |
| AGAAATCAAAAGATTGCGGA+AGG | 0.608144 | 7_2:+13542415 | Msa1049910:CDS |
| AAAACAGAAAGAGGGTGATG+TGG | 0.611411 | 7_2:+13538234 | Msa1049910:CDS |
| TGTGGGGAAGAAGAAACAGA+AGG | 0.611776 | 7_2:+13538000 | Msa1049910:CDS |
| AACATGTCTTCGATCATCGC+CGG | 0.613411 | 7_2:+13537806 | Msa1049910:exon |
| GACCTTCTTATGAAACTTGG+GGG | 0.615822 | 7_2:-13542606 | None:intergenic |
| ATGATCGAAGACATGTTCGC+CGG | 0.623495 | 7_2:-13537800 | None:intergenic |
| GGAATATTAATGTAGCAAAG+AGG | 0.625078 | 7_2:+13541402 | Msa1049910:intron |
| ATTGTAATTTCTTTGACCGG+AGG | 0.630255 | 7_2:-13541690 | None:intergenic |
| TGAAGCTTCATACTGATGTG+CGG | 0.633745 | 7_2:+13541724 | Msa1049910:CDS |
| AACACAAATTGGGTCAGGGA+AGG | 0.634137 | 7_2:+13538318 | Msa1049910:CDS |
| GGTCGGTCGAAATATGGCAT+AGG | 0.636236 | 7_2:-13542458 | None:intergenic |
| GAAGGAAATTCGTGGTTGTG+GGG | 0.636910 | 7_2:+13537984 | Msa1049910:CDS |
| GTGTAACACAAATTGGGTCA+GGG | 0.638761 | 7_2:+13538314 | Msa1049910:CDS |
| AGTGGTGGCGATTGAATCGG+CGG | 0.640000 | 7_2:-13537773 | None:intergenic |
| ATGTTCGCCGGAGAAAGTGG+TGG | 0.647831 | 7_2:-13537788 | None:intergenic |
| GGAAAAGGAGAGACAACAGA+AGG | 0.651571 | 7_2:+13542285 | Msa1049910:CDS |
| CCTGCTCATCAAACTCAGCA+CGG | 0.657070 | 7_2:-13541755 | None:intergenic |
| TATCTTGGGAAGCTTAGTTG+AGG | 0.660509 | 7_2:-13542688 | None:intergenic |
| TGCAGCTTGACATCTAAAGG+AGG | 0.677317 | 7_2:+13541054 | Msa1049910:intron |
| TCAACAACCACCACTCTTGG+GGG | 0.683589 | 7_2:+13541196 | Msa1049910:CDS |
| GAAGAAGAAACAGAAGCACG+CGG | 0.692861 | 7_2:-13538502 | None:intergenic |
| CTGGATGATCTACAAGCACG+CGG | 0.696436 | 7_2:-13537839 | None:intergenic |
| TTGGACAACAGATGAACCTG+AGG | 0.708277 | 7_2:+13541515 | Msa1049910:CDS |
| TGATCTACAAGCACGCGGTG+TGG | 0.720854 | 7_2:-13537834 | None:intergenic |
| ACCGACCCTTTATCCCAAGG+AGG | 0.724453 | 7_2:+13542474 | Msa1049910:CDS |
| AATGAATTGAGGAATCTCGG+CGG | 0.761527 | 7_2:-13542847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGCAATATAAATAAATA+CGG | + | chr7_2:13538628-13538647 | Msa1049910:intron | 10.0% |
| !! | AACAACAATAATAATAATAA+CGG | - | chr7_2:13541333-13541352 | None:intergenic | 10.0% |
| !!! | AAAATCATTTTGTTTTCAAA+CGG | + | chr7_2:13538598-13538617 | Msa1049910:intron | 15.0% |
| !! | AAAACTAAGAAAAACATAAT+GGG | - | chr7_2:13539695-13539714 | None:intergenic | 15.0% |
| !! | AAAACTAATTCAAATTGAAT+TGG | - | chr7_2:13539960-13539979 | None:intergenic | 15.0% |
| !! | AAAACTAATTCAAATTGAAT+TGG | - | chr7_2:13539960-13539979 | None:intergenic | 15.0% |
| !!! | GATTATGACATTTTTTTTTA+TGG | + | chr7_2:13541381-13541400 | Msa1049910:intron | 15.0% |
| !! | ATTCATACAAAAATCTAATA+AGG | - | chr7_2:13542554-13542573 | None:intergenic | 15.0% |
| !!! | ATTAGATTTTTGTATGAATA+AGG | + | chr7_2:13542555-13542574 | Msa1049910:intron | 15.0% |
| !! | TTAATATCAAAATGTATCTT+GGG | - | chr7_2:13542705-13542724 | None:intergenic | 15.0% |
| !! | ATTAATATCAAAATGTATCT+TGG | - | chr7_2:13542706-13542725 | None:intergenic | 15.0% |
| !!! | AAGAAGAGTTTTTTAAGAAT+CGG | + | chr7_2:13538146-13538165 | Msa1049910:CDS | 20.0% |
| !! | TATGAATAAAAATGGAATCA+GGG | + | chr7_2:13539160-13539179 | Msa1049910:intron | 20.0% |
| !! | TTAGCTTAATTGGTATTTAT+TGG | - | chr7_2:13539449-13539468 | None:intergenic | 20.0% |
| !!! | AAAGTAAAAGTTAGCTTAAT+TGG | - | chr7_2:13539459-13539478 | None:intergenic | 20.0% |
| !! | CAAAACTAAGAAAAACATAA+TGG | - | chr7_2:13539696-13539715 | None:intergenic | 20.0% |
| !! | TATTATATTTGTACAAGTTG+CGG | + | chr7_2:13539872-13539891 | Msa1049910:intron | 20.0% |
| !!! | TCAATTTGAATTAGTTTTGA+TGG | + | chr7_2:13539962-13539981 | Msa1049910:intron | 20.0% |
| !!! | GAAAATCAACTTTTTTTCAA+GGG | + | chr7_2:13539984-13540003 | Msa1049910:intron | 20.0% |
| !!! | TGAAAATCAACTTTTTTCTA+AGG | + | chr7_2:13540055-13540074 | Msa1049910:intron | 20.0% |
| !!! | GAAAATCAACTTTTTTCTAA+GGG | + | chr7_2:13540056-13540075 | Msa1049910:intron | 20.0% |
| !!! | TCAATTTGAATTAGTTTTGA+TGG | + | chr7_2:13539962-13539981 | Msa1049910:intron | 20.0% |
| !!! | GAAAATCAACTTTTTTTCAA+GGG | + | chr7_2:13539984-13540003 | Msa1049910:intron | 20.0% |
| !! | ACATAACTTATAACATTCAT+AGG | - | chr7_2:13540959-13540978 | None:intergenic | 20.0% |
| !! | AAAAGTTCACTATAATTAAG+TGG | + | chr7_2:13541586-13541605 | Msa1049910:intron | 20.0% |
| !! | CAAATCAAGAAAAAAAAAAC+AGG | - | chr7_2:13542073-13542092 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTTTTCTTGATT+TGG | + | chr7_2:13542071-13542090 | Msa1049910:intron | 20.0% |
| !! | TGTACAGTGTTTAAAAATAT+CGG | + | chr7_2:13542823-13542842 | Msa1049910:three_prime_UTR | 20.0% |
| ! | AGTGTTATAGTTGAAAGAAT+CGG | - | chr7_2:13537694-13537713 | None:intergenic | 25.0% |
| ! | GTAATTGTAAAGAGAAGAAT+AGG | + | chr7_2:13538083-13538102 | Msa1049910:CDS | 25.0% |
| !!! | AGAAGAGTTTTTTAAGAATC+GGG | + | chr7_2:13538147-13538166 | Msa1049910:CDS | 25.0% |
| ! | ACAACTACATTATCAATTTC+AGG | - | chr7_2:13538211-13538230 | None:intergenic | 25.0% |
| ! | GTTACAAACATCAAACTTAA+AGG | - | chr7_2:13538732-13538751 | None:intergenic | 25.0% |
| ! | GTTTGATGTTTGTAACATAT+AGG | + | chr7_2:13538736-13538755 | Msa1049910:intron | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | - | chr7_2:13539314-13539333 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | + | chr7_2:13538765-13538784 | Msa1049910:intron | 25.0% |
| ! | CTGATTCTTCAAAAAAAACT+GGG | - | chr7_2:13538896-13538915 | None:intergenic | 25.0% |
| ! | GAGTTGAGTATATTTATCAT+CGG | - | chr7_2:13539041-13539060 | None:intergenic | 25.0% |
| !! | AGCTTTGGTATGAATAAAAA+TGG | + | chr7_2:13539152-13539171 | Msa1049910:intron | 25.0% |
| ! | GTATGAATAAAAATGGAATC+AGG | + | chr7_2:13539159-13539178 | Msa1049910:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | - | chr7_2:13538765-13538784 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | + | chr7_2:13539314-13539333 | Msa1049910:intron | 25.0% |
| !!! | AAGTTTGTTTTGTAACAGAT+AGG | - | chr7_2:13538765-13538784 | None:intergenic | 25.0% |
| ! | CTGTTACAAAACAAACTTAA+AGG | + | chr7_2:13539314-13539333 | Msa1049910:intron | 25.0% |
| ! | TTGTGTTTAATCCAAGTATT+TGG | + | chr7_2:13539602-13539621 | Msa1049910:intron | 25.0% |
| ! | TCAAATCAATACCAAATACT+TGG | - | chr7_2:13539616-13539635 | None:intergenic | 25.0% |
| !!! | GTATTTGGTATTGATTTGAT+TGG | + | chr7_2:13539617-13539636 | Msa1049910:intron | 25.0% |
| ! | AAGAGCTATTTGATTGAAAT+TGG | + | chr7_2:13539737-13539756 | Msa1049910:intron | 25.0% |
| ! | TGTGTATCAATTGTCATAAA+TGG | + | chr7_2:13539804-13539823 | Msa1049910:intron | 25.0% |
| !!! | GGAAAATCAACTTTTTTTCA+AGG | + | chr7_2:13539983-13540002 | Msa1049910:intron | 25.0% |
| !! | ACAGAATATCAACTCTTTTA+AGG | + | chr7_2:13540114-13540133 | Msa1049910:intron | 25.0% |
| !! | CAGAATATCAACTCTTTTAA+GGG | + | chr7_2:13540115-13540134 | Msa1049910:intron | 25.0% |
| !!! | GGAAAATCAACTTTTTTTCA+AGG | + | chr7_2:13539983-13540002 | Msa1049910:intron | 25.0% |
| !!! | TGAAAATCAACTTTTTTCCA+AGG | + | chr7_2:13540319-13540338 | Msa1049910:intron | 25.0% |
| !!! | GAAAATCAACTTTTTTCCAA+GGG | + | chr7_2:13540320-13540339 | Msa1049910:intron | 25.0% |
| !! | ACAGAATATCAACTCTTTTA+AGG | + | chr7_2:13540114-13540133 | Msa1049910:intron | 25.0% |
| !! | CAGAATATCAACTCTTTTAA+GGG | + | chr7_2:13540115-13540134 | Msa1049910:intron | 25.0% |
| ! | AATGAAAACTTCAAAACTCT+TGG | - | chr7_2:13541154-13541173 | None:intergenic | 25.0% |
| !!! | TATAGTGAACTTTTGAGTTT+TGG | - | chr7_2:13541580-13541599 | None:intergenic | 25.0% |
| ! | ATAATTAAGTGGCATCTATA+TGG | + | chr7_2:13541597-13541616 | Msa1049910:intron | 25.0% |
| ! | TCTATTGCTATAATGATATG+AGG | + | chr7_2:13541623-13541642 | Msa1049910:intron | 25.0% |
| !! | TAGTTACTGAATTCTAGTTA+CGG | + | chr7_2:13541926-13541945 | Msa1049910:intron | 25.0% |
| !! | AGTATTGAAAAAGTACAACA+AGG | - | chr7_2:13541961-13541980 | None:intergenic | 25.0% |
| ! | CATGAACTTAAAAATGCAAA+TGG | - | chr7_2:13542022-13542041 | None:intergenic | 25.0% |
| ! | TAGGAACTTAAAAATGCAAA+TGG | - | chr7_2:13542102-13542121 | None:intergenic | 25.0% |
| !!! | ATTTGCATTTTTAAGTTCCT+AGG | + | chr7_2:13542101-13542120 | Msa1049910:intron | 25.0% |
| !!! | TTTGCATTTTTAAGTTCCTA+GGG | + | chr7_2:13542102-13542121 | Msa1049910:intron | 25.0% |
| ! | TTATGAAATATGTGAGTTGT+AGG | + | chr7_2:13542186-13542205 | Msa1049910:intron | 25.0% |
| ! | CTTCATAGAGCAATATAAAT+TGG | + | chr7_2:13542264-13542283 | Msa1049910:CDS | 25.0% |
| ! | AGAGCAATATAAATTGGAAA+AGG | + | chr7_2:13542270-13542289 | Msa1049910:CDS | 25.0% |
| ! | ATTCATCAGCATTTAATGAA+AGG | - | chr7_2:13542364-13542383 | None:intergenic | 25.0% |
| ! | AAGAAGAAATCAAAAGATTG+CGG | + | chr7_2:13542411-13542430 | Msa1049910:CDS | 25.0% |
| ! | ATTCAACACTATTCAGAAAA+GGG | - | chr7_2:13542756-13542775 | None:intergenic | 25.0% |
| ! | AATTCAACACTATTCAGAAA+AGG | - | chr7_2:13542757-13542776 | None:intergenic | 25.0% |
| ! | TTGATAAGTCTAATGAATTG+AGG | - | chr7_2:13542861-13542880 | None:intergenic | 25.0% |
| TTTACATTCTCAGTGTGTTT+GGG | - | chr7_2:13537878-13537897 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGACTGAACAAGA+AGG | - | chr7_2:13537914-13537933 | None:intergenic | 30.0% |
| AATGTGTTTGTGTAGCTTAT+CGG | + | chr7_2:13538107-13538126 | Msa1049910:CDS | 30.0% | |
| AGTTGTTGAAAAACAGAAAG+AGG | + | chr7_2:13538225-13538244 | Msa1049910:CDS | 30.0% | |
| GTTGTTGAAAAACAGAAAGA+GGG | + | chr7_2:13538226-13538245 | Msa1049910:CDS | 30.0% | |
| !! | CCATCTTCATCATCATTTTT+AGG | - | chr7_2:13538385-13538404 | None:intergenic | 30.0% |
| ! | CCTAAAAATGATGATGAAGA+TGG | + | chr7_2:13538382-13538401 | Msa1049910:CDS | 30.0% |
| !!! | TCTGGTTTTGATTAGTTTTG+TGG | + | chr7_2:13538572-13538591 | Msa1049910:intron | 30.0% |
| GTTACAAACGTCAAACTTAA+AGG | - | chr7_2:13539345-13539364 | None:intergenic | 30.0% | |
| GTTTGACGTTTGTAACATAT+AGG | + | chr7_2:13538676-13538695 | Msa1049910:intron | 30.0% | |
| CTGTTACAAAACGAACTTAA+AGG | - | chr7_2:13538703-13538722 | None:intergenic | 30.0% | |
| AAAAAAACTGGGTGTAGTAA+AGG | - | chr7_2:13538885-13538904 | None:intergenic | 30.0% | |
| CCTGATTCTTCAAAAAAAAC+TGG | - | chr7_2:13538897-13538916 | None:intergenic | 30.0% | |
| !!! | CCAGTTTTTTTTGAAGAATC+AGG | + | chr7_2:13538894-13538913 | Msa1049910:intron | 30.0% |
| AATAATGCTGGTATTACACT+TGG | + | chr7_2:13539106-13539125 | Msa1049910:intron | 30.0% | |
| !!! | CACGTCAGTGTTTTTTTTTA+CGG | + | chr7_2:13539239-13539258 | Msa1049910:intron | 30.0% |
| GTTACAAACGTCAAACTTAA+AGG | + | chr7_2:13539345-13539364 | Msa1049910:intron | 30.0% | |
| GTTTGACGTTTGTAACATAT+AGG | - | chr7_2:13538676-13538695 | None:intergenic | 30.0% | |
| GTTACAAACGTCAAACTTAA+AGG | + | chr7_2:13539345-13539364 | Msa1049910:intron | 30.0% | |
| ATGAATATTGAATGAGTGCT+AGG | + | chr7_2:13539525-13539544 | Msa1049910:intron | 30.0% | |
| ACACAATATGAAACCTTCTA+TGG | - | chr7_2:13539588-13539607 | None:intergenic | 30.0% | |
| ! | GAGAAAATCAACTGTTTTCA+AGG | + | chr7_2:13539646-13539665 | Msa1049910:intron | 30.0% |
| !!! | TCAAGTGCTTAGTTTTGATA+AGG | + | chr7_2:13539911-13539930 | Msa1049910:intron | 30.0% |
| !!! | ACTTTTTTTCAAGGGCTATT+TGG | + | chr7_2:13539992-13540011 | Msa1049910:intron | 30.0% |
| !!! | ACTTTTTTCTAAGGGCTATT+TGG | + | chr7_2:13540064-13540083 | Msa1049910:intron | 30.0% |
| !!! | TCAAGTGCTTAGTTTTGATA+AGG | + | chr7_2:13539911-13539930 | Msa1049910:intron | 30.0% |
| !!! | ACTTTTTTTCAAGGGCTATT+TGG | + | chr7_2:13539992-13540011 | Msa1049910:intron | 30.0% |
| TAGTAAGTGAGTGCTAATTT+CGG | + | chr7_2:13540484-13540503 | Msa1049910:intron | 30.0% | |
| CTAAACGCTTGATTAAGAAA+AGG | - | chr7_2:13540559-13540578 | None:intergenic | 30.0% | |
| !!! | TCAAGCGTTTAGTTTTGATT+AGG | + | chr7_2:13540567-13540586 | Msa1049910:intron | 30.0% |
| !!! | CAAGCGTTTAGTTTTGATTA+GGG | + | chr7_2:13540568-13540587 | Msa1049910:intron | 30.0% |
| ACTCACTTATTCATGACAAT+TGG | - | chr7_2:13540666-13540685 | None:intergenic | 30.0% | |
| !!! | TCAAGTGTTTAGTTTTGATG+AGG | + | chr7_2:13540757-13540776 | Msa1049910:intron | 30.0% |
| !!! | CAAGTGTTTAGTTTTGATGA+GGG | + | chr7_2:13540758-13540777 | Msa1049910:intron | 30.0% |
| ! | TGACAAATCAACTCTTTTCA+AGG | + | chr7_2:13540822-13540841 | Msa1049910:intron | 30.0% |
| ! | GACAAATCAACTCTTTTCAA+GGG | + | chr7_2:13540823-13540842 | Msa1049910:intron | 30.0% |
| GGAATATTAATGTAGCAAAG+AGG | + | chr7_2:13541402-13541421 | Msa1049910:intron | 30.0% | |
| ATTAATGTAGCAAAGAGGAA+AGG | + | chr7_2:13541407-13541426 | Msa1049910:intron | 30.0% | |
| !! | AGAAGAGGTATTTGAACAAA+AGG | + | chr7_2:13541434-13541453 | Msa1049910:CDS | 30.0% |
| ! | CTTTTCATTACGTAGCAAAA+CGG | - | chr7_2:13541546-13541565 | None:intergenic | 30.0% |
| !! | TGAGGTATTTGACATTCTTT+TGG | + | chr7_2:13541641-13541660 | Msa1049910:intron | 30.0% |
| GGTATTGTAATTTCTTTGAC+CGG | - | chr7_2:13541696-13541715 | None:intergenic | 30.0% | |
| GGAGAAAATGAAGATAAAAG+AGG | - | chr7_2:13541783-13541802 | None:intergenic | 30.0% | |
| ! | GTTGAAAAAGTACAAGAAGA+AGG | - | chr7_2:13541804-13541823 | None:intergenic | 30.0% |
| ! | GCACTACTATTTGCATTTTA+AGG | + | chr7_2:13541856-13541875 | Msa1049910:intron | 30.0% |
| !!! | TATTTGCATTTTAAGGTCCT+AGG | + | chr7_2:13541863-13541882 | Msa1049910:intron | 30.0% |
| !!! | ATTTGCATTTTAAGGTCCTA+GGG | + | chr7_2:13541864-13541883 | Msa1049910:intron | 30.0% |
| GTAGCTAAAATTATATCCCT+AGG | - | chr7_2:13541883-13541902 | None:intergenic | 30.0% | |
| ! | ATTGAAAAAGTACAACAAGG+AGG | - | chr7_2:13541958-13541977 | None:intergenic | 30.0% |
| !!! | GCCTTTGTTTTTTCTTGATT+TGG | + | chr7_2:13541991-13542010 | Msa1049910:intron | 30.0% |
| GCCAAATCAAGAAAAAACAA+AGG | - | chr7_2:13541995-13542014 | None:intergenic | 30.0% | |
| GTAGCTAAAATTATATCCCT+AGG | - | chr7_2:13541883-13541902 | None:intergenic | 30.0% | |
| CTTCATAGACTAATGAATAG+TGG | + | chr7_2:13542144-13542163 | Msa1049910:intron | 30.0% | |
| ATTCTTGTATCCACTAAAGT+TGG | + | chr7_2:13542382-13542401 | Msa1049910:intron | 30.0% | |
| TTGACCTTCTTATGAAACTT+GGG | - | chr7_2:13542611-13542630 | None:intergenic | 30.0% | |
| TCTAATGAATTGAGGAATCT+CGG | - | chr7_2:13542853-13542872 | None:intergenic | 30.0% | |
| ! | ATAAAATGTTGTGTTACTGC+TGG | + | chr7_2:13542880-13542899 | Msa1049910:three_prime_UTR | 30.0% |
| GTTTACATTCTCAGTGTGTT+TGG | - | chr7_2:13537879-13537898 | None:intergenic | 35.0% | |
| !! | AACAAGAAGGAGGAGTATTA+GGG | - | chr7_2:13537901-13537920 | None:intergenic | 35.0% |
| !! | TTTTTGACTGAACAAGAAGG+AGG | - | chr7_2:13537911-13537930 | None:intergenic | 35.0% |
| ! | GAATTAGGGTTAGGGTTTTT+AGG | - | chr7_2:13537944-13537963 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGAGGGGAATTA+GGG | - | chr7_2:13537958-13537977 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTTGAGGGGAATT+AGG | - | chr7_2:13537959-13537978 | None:intergenic | 35.0% |
| ! | AGAGAGAGTGTAACACAAAT+TGG | + | chr7_2:13538307-13538326 | Msa1049910:CDS | 35.0% |
| ! | GAGAGAGTGTAACACAAATT+GGG | + | chr7_2:13538308-13538327 | Msa1049910:CDS | 35.0% |
| ! | TGATGATGAAGATGGAAAAG+AGG | + | chr7_2:13538390-13538409 | Msa1049910:CDS | 35.0% |
| ! | AGAGAGAATGATGATGTTTC+TGG | + | chr7_2:13538424-13538443 | Msa1049910:CDS | 35.0% |
| !! | ATTTTGACGTCTCAGAATCT+TGG | + | chr7_2:13538472-13538491 | Msa1049910:CDS | 35.0% |
| ! | TTTTGACGTCTCAGAATCTT+GGG | + | chr7_2:13538473-13538492 | Msa1049910:CDS | 35.0% |
| ! | TGCTTCTGTTTCTTCTTCTT+GGG | + | chr7_2:13538507-13538526 | Msa1049910:CDS | 35.0% |
| ! | TTTTACGGTGAGTTAACAGA+AGG | - | chr7_2:13539254-13539273 | None:intergenic | 35.0% |
| !!! | TCACGTCAGCGTTTTTTTTA+CGG | - | chr7_2:13538838-13538857 | None:intergenic | 35.0% |
| AACTGTTGTCTTCTTTCCTT+CGG | - | chr7_2:13538929-13538948 | None:intergenic | 35.0% | |
| ACCACACGAAATCTAATTGT+TGG | + | chr7_2:13538951-13538970 | Msa1049910:intron | 35.0% | |
| TCCAACAATTAGATTTCGTG+TGG | - | chr7_2:13538955-13538974 | None:intergenic | 35.0% | |
| ! | TGCAATGTACTTGGTAATCT+TGG | - | chr7_2:13538994-13539013 | None:intergenic | 35.0% |
| GATTACCAAGTACATTGCAA+AGG | + | chr7_2:13538995-13539014 | Msa1049910:intron | 35.0% | |
| TATTGCCTTTGCAATGTACT+TGG | - | chr7_2:13539003-13539022 | None:intergenic | 35.0% | |
| TAATACCAGCATTATTGCAG+GGG | - | chr7_2:13539102-13539121 | None:intergenic | 35.0% | |
| GTAATACCAGCATTATTGCA+GGG | - | chr7_2:13539103-13539122 | None:intergenic | 35.0% | |
| TGTAATACCAGCATTATTGC+AGG | - | chr7_2:13539104-13539123 | None:intergenic | 35.0% | |
| GCTTGAATTCGTCAAATCAA+TGG | - | chr7_2:13539135-13539154 | None:intergenic | 35.0% | |
| GATTTGACGAATTCAAGCTT+TGG | + | chr7_2:13539137-13539156 | Msa1049910:intron | 35.0% | |
| TTGAGAATTGGGGAAATGTA+AGG | + | chr7_2:13539184-13539203 | Msa1049910:intron | 35.0% | |
| TGAGAATTGGGGAAATGTAA+GGG | + | chr7_2:13539185-13539204 | Msa1049910:intron | 35.0% | |
| CGTAAAAAAAAACACTGACG+TGG | - | chr7_2:13539241-13539260 | None:intergenic | 35.0% | |
| GCACACTGTTACAAAGTTAA+AGG | + | chr7_2:13539285-13539304 | Msa1049910:intron | 35.0% | |
| GTTTGACGTTTGTAACATAC+AGG | - | chr7_2:13539341-13539360 | None:intergenic | 35.0% | |
| !! | TATTGGCTTAATTACACCAC+AGG | - | chr7_2:13539432-13539451 | None:intergenic | 35.0% |
| ATGACTCAGTCTCTTCTTAT+AGG | + | chr7_2:13539554-13539573 | Msa1049910:intron | 35.0% | |
| TGACTCAGTCTCTTCTTATA+GGG | + | chr7_2:13539555-13539574 | Msa1049910:intron | 35.0% | |
| !! | CAACTCTTTTAAGGGCTATT+TGG | + | chr7_2:13540123-13540142 | Msa1049910:intron | 35.0% |
| !!! | ACTTTTTTCCAAGGGCTATT+TGG | + | chr7_2:13540328-13540347 | Msa1049910:intron | 35.0% |
| AATTGCAGCTTGACATCTAA+AGG | + | chr7_2:13541051-13541070 | Msa1049910:intron | 35.0% | |
| GTTTATCCAAAGACTTCGTT+TGG | + | chr7_2:13541359-13541378 | Msa1049910:intron | 35.0% | |
| CATAATCCAAACGAAGTCTT+TGG | - | chr7_2:13541368-13541387 | None:intergenic | 35.0% | |
| AAGAGGAAAGGTTAAAGAAG+AGG | + | chr7_2:13541419-13541438 | Msa1049910:CDS | 35.0% | |
| AGACAGAAGAAGAGAAACAA+AGG | + | chr7_2:13541469-13541488 | Msa1049910:CDS | 35.0% | |
| ATTGTAATTTCTTTGACCGG+AGG | - | chr7_2:13541693-13541712 | None:intergenic | 35.0% | |
| !!! | GCCTATGTTTTTTCTTGATC+TGG | + | chr7_2:13541834-13541853 | Msa1049910:intron | 35.0% |
| GCCAGATCAAGAAAAAACAT+AGG | - | chr7_2:13541838-13541857 | None:intergenic | 35.0% | |
| TGAATGTTGAATTGTGCAGA+TGG | + | chr7_2:13542228-13542247 | Msa1049910:intron | 35.0% | |
| AGAAATCAAAAGATTGCGGA+AGG | + | chr7_2:13542415-13542434 | Msa1049910:CDS | 35.0% | |
| ! | TTATGAAACTTGGGGGTTTT+GGG | - | chr7_2:13542602-13542621 | None:intergenic | 35.0% |
| TGACCTTCTTATGAAACTTG+GGG | - | chr7_2:13542610-13542629 | None:intergenic | 35.0% | |
| CTTGACCTTCTTATGAAACT+TGG | - | chr7_2:13542612-13542631 | None:intergenic | 35.0% | |
| ! | TTTGGGTGTTTGCTGAATTC+TGG | - | chr7_2:13537861-13537880 | None:intergenic | 40.0% |
| !! | GAACAAGAAGGAGGAGTATT+AGG | - | chr7_2:13537902-13537921 | None:intergenic | 40.0% |
| TTTGAGGGGAATTAGGGTTA+GGG | - | chr7_2:13537952-13537971 | None:intergenic | 40.0% | |
| ATTCCCCTCAAACCAAAATC+CGG | + | chr7_2:13537960-13537979 | Msa1049910:CDS | 40.0% | |
| GAAACAGAAGGAAGATGTGA+AGG | + | chr7_2:13538012-13538031 | Msa1049910:CDS | 40.0% | |
| AGAAGGAAGATGTGAAGGAA+GGG | + | chr7_2:13538017-13538036 | Msa1049910:CDS | 40.0% | |
| AAAACAGAAAGAGGGTGATG+TGG | + | chr7_2:13538234-13538253 | Msa1049910:CDS | 40.0% | |
| AAACAGAAAGAGGGTGATGT+GGG | + | chr7_2:13538235-13538254 | Msa1049910:CDS | 40.0% | |
| AGAGAAGTAGAGAGAGATTG+AGG | + | chr7_2:13538275-13538294 | Msa1049910:CDS | 40.0% | |
| GAGAAGTAGAGAGAGATTGA+GGG | + | chr7_2:13538276-13538295 | Msa1049910:CDS | 40.0% | |
| AGTGTAACACAAATTGGGTC+AGG | + | chr7_2:13538313-13538332 | Msa1049910:CDS | 40.0% | |
| GTGTAACACAAATTGGGTCA+GGG | + | chr7_2:13538314-13538333 | Msa1049910:CDS | 40.0% | |
| GAAGGTTCAGAGTTTGGTTA+AGG | + | chr7_2:13538336-13538355 | Msa1049910:CDS | 40.0% | |
| TGAAGATGGAAAAGAGGAGA+AGG | + | chr7_2:13538396-13538415 | Msa1049910:CDS | 40.0% | |
| ! | GTGCTTCTGTTTCTTCTTCT+TGG | + | chr7_2:13538506-13538525 | Msa1049910:CDS | 40.0% |
| ! | TCTGTTTCTTCTTCTTGGGA+TGG | + | chr7_2:13538511-13538530 | Msa1049910:CDS | 40.0% |
| CCAGAACACTAGAGATTAAC+CGG | - | chr7_2:13538557-13538576 | None:intergenic | 40.0% | |
| ATACGGCTTAATTACACCAC+AGG | + | chr7_2:13538645-13538664 | Msa1049910:intron | 40.0% | |
| GCACACTGTTACAGAGTTAA+AGG | - | chr7_2:13538792-13538811 | None:intergenic | 40.0% | |
| AATCAGGAGAAGATAACCGA+AGG | + | chr7_2:13538910-13538929 | Msa1049910:intron | 40.0% | |
| TGGAATCAGGGTTTGAGAAT+TGG | + | chr7_2:13539172-13539191 | Msa1049910:intron | 40.0% | |
| GGAATCAGGGTTTGAGAATT+GGG | + | chr7_2:13539173-13539192 | Msa1049910:intron | 40.0% | |
| GAATCAGGGTTTGAGAATTG+GGG | + | chr7_2:13539174-13539193 | Msa1049910:intron | 40.0% | |
| TTGGGGAAATGTAAGGGTAA+AGG | + | chr7_2:13539191-13539210 | Msa1049910:intron | 40.0% | |
| TAAGAAGAGACTGAGTCATG+TGG | - | chr7_2:13539553-13539572 | None:intergenic | 40.0% | |
| ATAGGGATAGCAACCATAGA+AGG | + | chr7_2:13539572-13539591 | Msa1049910:intron | 40.0% | |
| !!! | AGTGAGTGCTATTTTCAGTG+TGG | + | chr7_2:13539829-13539848 | Msa1049910:intron | 40.0% |
| AATTGCAACCAAATAGCCCT+TGG | - | chr7_2:13540075-13540094 | None:intergenic | 40.0% | |
| !! | CTAGTGAGTGAGTGCTATTT+CGG | + | chr7_2:13540995-13541014 | Msa1049910:intron | 40.0% |
| AATCAACAACCACCACTCTT+GGG | + | chr7_2:13541194-13541213 | Msa1049910:CDS | 40.0% | |
| ACATCAGTTCGAAGCTTGAA+AGG | - | chr7_2:13541268-13541287 | None:intergenic | 40.0% | |
| TGAAGCTTCATACTGATGTG+CGG | + | chr7_2:13541724-13541743 | Msa1049910:CDS | 40.0% | |
| TCACTAATTCGCCATGTTTC+TGG | + | chr7_2:13542334-13542353 | Msa1049910:intron | 40.0% | |
| CACTAATTCGCCATGTTTCT+GGG | + | chr7_2:13542335-13542354 | Msa1049910:intron | 40.0% | |
| TGAAAGGAAACCCAGAAACA+TGG | - | chr7_2:13542348-13542367 | None:intergenic | 40.0% | |
| TCTTCTTCAGCCAACTTTAG+TGG | - | chr7_2:13542395-13542414 | None:intergenic | 40.0% | |
| ! | TATGGCATAGGTTGTGCTTT+TGG | - | chr7_2:13542449-13542468 | None:intergenic | 40.0% |
| ATAAAGGGTCGGTCGAAATA+TGG | - | chr7_2:13542467-13542486 | None:intergenic | 40.0% | |
| ! | CTTATGAAACTTGGGGGTTT+TGG | - | chr7_2:13542603-13542622 | None:intergenic | 40.0% |
| AACCCCCAAGTTTCATAAGA+AGG | + | chr7_2:13542604-13542623 | Msa1049910:CDS | 40.0% | |
| GACCTTCTTATGAAACTTGG+GGG | - | chr7_2:13542609-13542628 | None:intergenic | 40.0% | |
| TATCTTGGGAAGCTTAGTTG+AGG | - | chr7_2:13542691-13542710 | None:intergenic | 40.0% | |
| AGCAACCAATTTAGTTGCAC+AGG | + | chr7_2:13542786-13542805 | Msa1049910:three_prime_UTR | 40.0% | |
| CAAAGCCTGTGCAACTAAAT+TGG | - | chr7_2:13542794-13542813 | None:intergenic | 40.0% | |
| CAATTTAGTTGCACAGGCTT+TGG | + | chr7_2:13542792-13542811 | Msa1049910:three_prime_UTR | 40.0% | |
| AATGAATTGAGGAATCTCGG+CGG | - | chr7_2:13542850-13542869 | None:intergenic | 40.0% | |
| GTTGAAAGAATCGGCGATGA+TGG | - | chr7_2:13537685-13537704 | None:intergenic | 45.0% | |
| ! | GAAAGTGGTGGCGATTGAAT+CGG | - | chr7_2:13537779-13537798 | None:intergenic | 45.0% |
| ATGATCGAAGACATGTTCGC+CGG | - | chr7_2:13537803-13537822 | None:intergenic | 45.0% | |
| AACATGTCTTCGATCATCGC+CGG | + | chr7_2:13537806-13537825 | Msa1049910:exon | 45.0% | |
| GTTTGAGGGGAATTAGGGTT+AGG | - | chr7_2:13537953-13537972 | None:intergenic | 45.0% | |
| !!! | TTCGCCGGATTTTGGTTTGA+GGG | - | chr7_2:13537967-13537986 | None:intergenic | 45.0% |
| ! | GAATTTCCTTCGCCGGATTT+TGG | - | chr7_2:13537975-13537994 | None:intergenic | 45.0% |
| CGAAGGAAATTCGTGGTTGT+GGG | + | chr7_2:13537983-13538002 | Msa1049910:CDS | 45.0% | |
| GAAGGAAATTCGTGGTTGTG+GGG | + | chr7_2:13537984-13538003 | Msa1049910:CDS | 45.0% | |
| TGTGGGGAAGAAGAAACAGA+AGG | + | chr7_2:13538000-13538019 | Msa1049910:CDS | 45.0% | |
| CAGAAGGAAGATGTGAAGGA+AGG | + | chr7_2:13538016-13538035 | Msa1049910:CDS | 45.0% | |
| GAAGGAAGATGTGAAGGAAG+GGG | + | chr7_2:13538018-13538037 | Msa1049910:CDS | 45.0% | |
| AAGGAAGATGTGAAGGAAGG+GGG | + | chr7_2:13538019-13538038 | Msa1049910:CDS | 45.0% | |
| !! | TGATGGTGGTGATGGTGATT+CGG | + | chr7_2:13538042-13538061 | Msa1049910:CDS | 45.0% |
| ! | TGATGGTGATTCGGGTTCAA+AGG | + | chr7_2:13538051-13538070 | Msa1049910:CDS | 45.0% |
| AAAGAGGGTGATGTGGGTTT+GGG | + | chr7_2:13538241-13538260 | Msa1049910:CDS | 45.0% | |
| AAGTAGAGAGAGATTGAGGG+AGG | + | chr7_2:13538279-13538298 | Msa1049910:CDS | 45.0% | |
| AACACAAATTGGGTCAGGGA+AGG | + | chr7_2:13538318-13538337 | Msa1049910:CDS | 45.0% | |
| !! | TGGTTCGTCGTTTTGTGCTT+CGG | + | chr7_2:13538444-13538463 | Msa1049910:CDS | 45.0% |
| ! | GAAGAAGAAACAGAAGCACG+CGG | - | chr7_2:13538505-13538524 | None:intergenic | 45.0% |
| TCTCGTGGAAGGTTTGATTC+CGG | + | chr7_2:13538535-13538554 | Msa1049910:intron | 45.0% | |
| CCGGTTAATCTCTAGTGTTC+TGG | + | chr7_2:13538554-13538573 | Msa1049910:intron | 45.0% | |
| CGTCAAACTTAAAGGACCTG+TGG | - | chr7_2:13539413-13539432 | None:intergenic | 45.0% | |
| TTCTTCCCCTGCAATAATGC+TGG | + | chr7_2:13539094-13539113 | Msa1049910:intron | 45.0% | |
| CGTCAAACTTAAAGGACCTG+TGG | + | chr7_2:13539413-13539432 | Msa1049910:intron | 45.0% | |
| GGCTATTTGGTTGCAAGTTG+CGG | + | chr7_2:13540136-13540155 | Msa1049910:intron | 45.0% | |
| ! | GTCAAACTGCTACTTGTACG+AGG | - | chr7_2:13540727-13540746 | None:intergenic | 45.0% |
| TGCAGCTTGACATCTAAAGG+AGG | + | chr7_2:13541054-13541073 | Msa1049910:intron | 45.0% | |
| CTAAAGGAGGTAGAAGTAGC+AGG | + | chr7_2:13541067-13541086 | Msa1049910:CDS | 45.0% | |
| GAATCAACAACCACCACTCT+TGG | + | chr7_2:13541193-13541212 | Msa1049910:CDS | 45.0% | |
| ATCAACAACCACCACTCTTG+GGG | + | chr7_2:13541195-13541214 | Msa1049910:CDS | 45.0% | |
| AGAAGCAGCAAAAAGTCACC+CGG | + | chr7_2:13541236-13541255 | Msa1049910:CDS | 45.0% | |
| GTTCGAAGCTTGAAAGGTTC+TGG | - | chr7_2:13541262-13541281 | None:intergenic | 45.0% | |
| CAAAGGATTCCTGTTGCACA+AGG | + | chr7_2:13541486-13541505 | Msa1049910:CDS | 45.0% | |
| TCAGGTTCATCTGTTGTCCA+AGG | - | chr7_2:13541516-13541535 | None:intergenic | 45.0% | |
| TTGGACAACAGATGAACCTG+AGG | + | chr7_2:13541515-13541534 | Msa1049910:CDS | 45.0% | |
| TAGCAAAACGGTCTTACCTC+AGG | - | chr7_2:13541534-13541553 | None:intergenic | 45.0% | |
| ACAGTGTTTGGCAAAACCTC+CGG | + | chr7_2:13541674-13541693 | Msa1049910:intron | 45.0% | |
| GTATGAAGCTTCAGGTCAAC+AGG | - | chr7_2:13541717-13541736 | None:intergenic | 45.0% | |
| GCACATCAGTATGAAGCTTC+AGG | - | chr7_2:13541725-13541744 | None:intergenic | 45.0% | |
| GAAGCTTCATACTGATGTGC+GGG | + | chr7_2:13541725-13541744 | Msa1049910:CDS | 45.0% | |
| GGAAAAGGAGAGACAACAGA+AGG | + | chr7_2:13542285-13542304 | Msa1049910:CDS | 45.0% | |
| AGATCAATCCTCACCTCCTT+GGG | - | chr7_2:13542490-13542509 | None:intergenic | 45.0% | |
| TAGATCAATCCTCACCTCCT+TGG | - | chr7_2:13542491-13542510 | None:intergenic | 45.0% | |
| !!! | AAACTTGGGGGTTTTGGGTA+GGG | - | chr7_2:13542597-13542616 | None:intergenic | 45.0% |
| ATGAATTGAGGAATCTCGGC+GGG | - | chr7_2:13542849-13542868 | None:intergenic | 45.0% | |
| TCAATCGCCACCACTTTCTC+CGG | + | chr7_2:13537781-13537800 | Msa1049910:five_prime_UTR | 50.0% | |
| CTGGATGATCTACAAGCACG+CGG | - | chr7_2:13537842-13537861 | None:intergenic | 50.0% | |
| !!! | TCGCCGGATTTTGGTTTGAG+GGG | - | chr7_2:13537966-13537985 | None:intergenic | 50.0% |
| !!! | CTTCGCCGGATTTTGGTTTG+AGG | - | chr7_2:13537968-13537987 | None:intergenic | 50.0% |
| CTCAAACCAAAATCCGGCGA+AGG | + | chr7_2:13537966-13537985 | Msa1049910:CDS | 50.0% | |
| AATCCGGCGAAGGAAATTCG+TGG | + | chr7_2:13537976-13537995 | Msa1049910:CDS | 50.0% | |
| CAACCACGAATTTCCTTCGC+CGG | - | chr7_2:13537982-13538001 | None:intergenic | 50.0% | |
| GCGAAGGAAATTCGTGGTTG+TGG | + | chr7_2:13537982-13538001 | Msa1049910:CDS | 50.0% | |
| !! | GATGGTGGTGATGGTGATTC+GGG | + | chr7_2:13538043-13538062 | Msa1049910:CDS | 50.0% |
| GAAAGAGGGTGATGTGGGTT+TGG | + | chr7_2:13538240-13538259 | Msa1049910:CDS | 50.0% | |
| TAGAGAGAGATTGAGGGAGG+AGG | + | chr7_2:13538282-13538301 | Msa1049910:CDS | 50.0% | |
| GTCAGGGAAGGTTCAGAGTT+TGG | + | chr7_2:13538330-13538349 | Msa1049910:CDS | 50.0% | |
| GACGTCTCAGAATCTTGGGT+TGG | + | chr7_2:13538477-13538496 | Msa1049910:CDS | 50.0% | |
| TCTTCTTGGGATGGATCTCG+TGG | + | chr7_2:13538520-13538539 | Msa1049910:CDS | 50.0% | |
| TTATTGCAGGGGAAGAACGC+AGG | - | chr7_2:13539091-13539110 | None:intergenic | 50.0% | |
| TCAACAACCACCACTCTTGG+GGG | + | chr7_2:13541196-13541215 | Msa1049910:CDS | 50.0% | |
| ! | AAGCTTGAAAGGTTCTGGCC+GGG | - | chr7_2:13541257-13541276 | None:intergenic | 50.0% |
| ! | GAAGCTTGAAAGGTTCTGGC+CGG | - | chr7_2:13541258-13541277 | None:intergenic | 50.0% |
| CAAGGAAGACCTTGTGCAAC+AGG | - | chr7_2:13541498-13541517 | None:intergenic | 50.0% | |
| CTGTTGCACAAGGTCTTCCT+TGG | + | chr7_2:13541496-13541515 | Msa1049910:CDS | 50.0% | |
| CCTGCTCATCAAACTCAGCA+CGG | - | chr7_2:13541758-13541777 | None:intergenic | 50.0% | |
| GGTCGGTCGAAATATGGCAT+AGG | - | chr7_2:13542461-13542480 | None:intergenic | 50.0% | |
| ACCTCCTTGGGATAAAGGGT+CGG | - | chr7_2:13542478-13542497 | None:intergenic | 50.0% | |
| CCTCACCTCCTTGGGATAAA+GGG | - | chr7_2:13542482-13542501 | None:intergenic | 50.0% | |
| TCCTCACCTCCTTGGGATAA+AGG | - | chr7_2:13542483-13542502 | None:intergenic | 50.0% | |
| !!! | GAAACTTGGGGGTTTTGGGT+AGG | - | chr7_2:13542598-13542617 | None:intergenic | 50.0% |
| ! | AGTTGAGGCAGGAGGAGTAT+TGG | - | chr7_2:13542676-13542695 | None:intergenic | 50.0% |
| TTGGGAAGCTTAGTTGAGGC+AGG | - | chr7_2:13542687-13542706 | None:intergenic | 50.0% | |
| ! | AGTGGTGGCGATTGAATCGG+CGG | - | chr7_2:13537776-13537795 | None:intergenic | 55.0% |
| ATGTTCGCCGGAGAAAGTGG+TGG | - | chr7_2:13537791-13537810 | None:intergenic | 55.0% | |
| GACATGTTCGCCGGAGAAAG+TGG | - | chr7_2:13537794-13537813 | None:intergenic | 55.0% | |
| TGATCTACAAGCACGCGGTG+TGG | - | chr7_2:13537837-13537856 | None:intergenic | 55.0% | |
| GATGTGAAGGAAGGGGGTGA+TGG | + | chr7_2:13538025-13538044 | Msa1049910:CDS | 55.0% | |
| CTTGGGATGGATCTCGTGGA+AGG | + | chr7_2:13538524-13538543 | Msa1049910:CDS | 55.0% | |
| CCGTGCTGAGTTTGATGAGC+AGG | + | chr7_2:13541755-13541774 | Msa1049910:CDS | 55.0% | |
| TCGACCGACCCTTTATCCCA+AGG | + | chr7_2:13542471-13542490 | Msa1049910:CDS | 55.0% | |
| ACCGACCCTTTATCCCAAGG+AGG | + | chr7_2:13542474-13542493 | Msa1049910:CDS | 55.0% | |
| CCCTTTATCCCAAGGAGGTG+AGG | + | chr7_2:13542479-13542498 | Msa1049910:intron | 55.0% | |
| !!! | TTGGGGGTTTTGGGTAGGGT+AGG | - | chr7_2:13542593-13542612 | None:intergenic | 55.0% |
| GGAAGCTTAGTTGAGGCAGG+AGG | - | chr7_2:13542684-13542703 | None:intergenic | 55.0% | |
| AGCACGCGGTGTGGTTGTTC+CGG | - | chr7_2:13537828-13537847 | None:intergenic | 60.0% | |
| ! | GTGAAGGAAGGGGGTGATGG+TGG | + | chr7_2:13538028-13538047 | Msa1049910:CDS | 60.0% |
| !! | GAAGGGGGTGATGGTGGTGA+TGG | + | chr7_2:13538034-13538053 | Msa1049910:CDS | 60.0% |
| ACAACCACCACTCTTGGGGG+AGG | + | chr7_2:13541199-13541218 | Msa1049910:CDS | 60.0% | |
| CAACCACCACTCTTGGGGGA+GGG | + | chr7_2:13541200-13541219 | Msa1049910:CDS | 60.0% | |
| TCATACTGATGTGCGGGCGC+TGG | + | chr7_2:13541731-13541750 | Msa1049910:CDS | 60.0% | |
| GCAGCAGCAGCTCATCGTCA+TGG | + | chr7_2:13542639-13542658 | Msa1049910:CDS | 60.0% | |
| TCTCCCTCCCCCAAGAGTGG+TGG | - | chr7_2:13541206-13541225 | None:intergenic | 65.0% | |
| CCTTCTCCCTCCCCCAAGAG+TGG | - | chr7_2:13541209-13541228 | None:intergenic | 65.0% | |
| CCACTCTTGGGGGAGGGAGA+AGG | + | chr7_2:13541206-13541225 | Msa1049910:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 13537665 | 13542909 | 13537665 | ID=Msa1049910;Name=Msa1049910 |
| chr7_2 | mRNA | 13537665 | 13542909 | 13537665 | ID=Msa1049910-mRNA-1;Parent=Msa1049910;Name=Msa1049910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=144|1|1|1|1|1|8|212|455 |
| chr7_2 | exon | 13537665 | 13538545 | 13537665 | ID=Msa1049910-mRNA-1:exon:3363;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13541059 | 13541095 | 13541059 | ID=Msa1049910-mRNA-1:exon:3364;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13541187 | 13541285 | 13541187 | ID=Msa1049910-mRNA-1:exon:3365;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13541417 | 13541536 | 13541417 | ID=Msa1049910-mRNA-1:exon:3366;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13541678 | 13541776 | 13541678 | ID=Msa1049910-mRNA-1:exon:3367;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13542247 | 13542306 | 13542247 | ID=Msa1049910-mRNA-1:exon:3368;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13542401 | 13542495 | 13542401 | ID=Msa1049910-mRNA-1:exon:3369;Parent=Msa1049910-mRNA-1 |
| chr7_2 | exon | 13542577 | 13542909 | 13542577 | ID=Msa1049910-mRNA-1:exon:3370;Parent=Msa1049910-mRNA-1 |
| chr7_2 | five_prime_UTR | 13537665 | 13537808 | 13537665 | ID=Msa1049910-mRNA-1:five_prime_utr;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13537809 | 13538545 | 13537809 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13541059 | 13541095 | 13541059 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13541187 | 13541285 | 13541187 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13541417 | 13541536 | 13541417 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13541678 | 13541776 | 13541678 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13542247 | 13542306 | 13542247 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13542401 | 13542495 | 13542401 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | CDS | 13542577 | 13542697 | 13542577 | ID=Msa1049910-mRNA-1:cds;Parent=Msa1049910-mRNA-1 |
| chr7_2 | three_prime_UTR | 13542698 | 13542909 | 13542698 | ID=Msa1049910-mRNA-1:three_prime_utr;Parent=Msa1049910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
