AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0233020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233020 MtrunA17_Chr2g0280421 95.426 787 11 1 1 762 1 787 0.0 1536
Msa0233020 MtrunA17_Chr4g0042061 57.874 762 276 6 37 761 39 792 0.0 839
Msa0233020 MtrunA17_Chr2g0319271 57.461 764 277 8 37 761 6 760 0.0 835
Msa0233020 MtrunA17_Chr4g0049011 58.533 709 196 9 56 748 3 629 0.0 773
Msa0233020 MtrunA17_Chr2g0312631 42.298 409 225 6 343 749 318 717 1.15e-91 309
Msa0233020 MtrunA17_Chr7g0271961 46.479 355 169 7 400 747 389 729 1.21e-90 305
Msa0233020 MtrunA17_Chr7g0272871 45.610 410 207 8 346 752 66 462 1.35e-90 300
Msa0233020 MtrunA17_Chr1g0191851 47.486 358 175 7 399 752 134 482 2.25e-89 297
Msa0233020 MtrunA17_Chr1g0195111 43.836 365 169 9 400 747 384 729 3.04e-87 296
Msa0233020 MtrunA17_Chr1g0192481 43.767 361 176 8 400 747 46 392 1.14e-84 280
Msa0233020 MtrunA17_Chr5g0411971 44.236 373 199 7 378 749 365 729 8.62e-84 288
Msa0233020 MtrunA17_Chr5g0421591 43.164 373 203 7 378 749 340 704 6.79e-82 280
Msa0233020 MtrunA17_Chr5g0421521 43.164 373 203 7 378 749 340 704 9.14e-82 281
Msa0233020 MtrunA17_Chr5g0407791 32.576 660 353 17 132 753 616 1221 4.99e-80 279
Msa0233020 MtrunA17_Chr3g0102921 36.876 461 228 12 329 744 339 781 7.65e-78 271
Msa0233020 MtrunA17_Chr5g0447041 37.924 472 201 14 339 744 361 806 3.45e-77 270
Msa0233020 MtrunA17_Chr8g0369881 31.579 646 362 17 116 753 634 1207 6.47e-77 270
Msa0233020 MtrunA17_Chr7g0257301 36.975 476 245 12 313 747 288 749 1.64e-75 264
Msa0233020 MtrunA17_Chr1g0191181 38.619 391 216 7 364 742 36 414 1.14e-68 238
Msa0233020 MtrunA17_Chr4g0045381 40.286 350 175 10 409 737 190 526 6.25e-60 221
Msa0233020 MtrunA17_Chr2g0322291 43.854 301 139 7 458 737 130 421 9.92e-59 216
Msa0233020 MtrunA17_Chr4g0069141 38.950 362 175 9 403 737 144 486 7.60e-58 214
Msa0233020 MtrunA17_Chr2g0327581 38.244 353 196 10 403 737 39 387 4.48e-57 211
Msa0233020 MtrunA17_Chr8g0367581 39.167 360 200 8 399 756 133 475 5.82e-57 211
Msa0233020 MtrunA17_Chr1g0178411 38.244 353 182 12 412 737 13 356 7.97e-56 207
Msa0233020 MtrunA17_Chr3g0122121 39.080 348 175 11 413 737 99 432 3.49e-55 206
Msa0233020 MtrunA17_Chr7g0266631 36.461 373 211 9 412 762 9 377 4.87e-55 204
Msa0233020 MtrunA17_Chr1g0193221 36.232 345 185 9 413 741 4 329 6.15e-54 202
Msa0233020 MtrunA17_Chr1g0182151 38.150 346 188 11 412 737 54 393 4.20e-53 199
Msa0233020 MtrunA17_Chr8g0377731 37.088 364 190 11 398 738 40 387 6.12e-53 199
Msa0233020 MtrunA17_Chr1g0152231 36.628 344 181 10 413 737 4 329 2.09e-50 189
Msa0233020 MtrunA17_Chr3g0134191 36.464 362 184 10 413 738 9 360 2.19e-49 187
Msa0233020 MtrunA17_Chr1g0153061 36.288 361 186 9 413 738 9 360 1.35e-48 185
Msa0233020 MtrunA17_Chr5g0427481 34.181 354 188 9 413 738 18 354 3.34e-48 184
Msa0233020 MtrunA17_Chr5g0398521 34.072 361 198 10 409 742 54 401 1.00e-47 182
Msa0233020 MtrunA17_Chr2g0307481 40.351 285 154 7 458 737 119 392 7.42e-47 177
Msa0233020 MtrunA17_Chr4g0053211 33.784 370 197 10 412 742 12 372 2.14e-46 179
Msa0233020 MtrunA17_Chr7g0269681 48.023 177 92 0 571 747 23 199 3.39e-46 172
Msa0233020 MtrunA17_Chr3g0132921 34.097 349 194 10 412 737 9 344 1.08e-45 171
Msa0233020 MtrunA17_Chr5g0445211 35.475 358 189 11 405 738 67 406 1.18e-45 176
Msa0233020 MtrunA17_Chr4g0035661 35.860 343 198 10 410 747 87 412 5.61e-45 174
Msa0233020 MtrunA17_Chr7g0245931 35.065 308 169 7 457 742 97 395 6.14e-44 171
Msa0233020 MtrunA17_Chr3g0145071 35.294 340 200 9 412 747 99 422 1.07e-43 170
Msa0233020 MtrunA17_Chr8g0386891 52.667 150 71 0 598 747 13 162 1.56e-43 162
Msa0233020 MtrunA17_Chr6g0484501 50.299 167 83 0 581 747 26 192 2.65e-43 157
Msa0233020 MtrunA17_Chr6g0483701 35.191 341 182 10 413 737 31 348 5.48e-43 168
Msa0233020 MtrunA17_Chr4g0062291 37.884 293 167 7 458 745 176 458 1.05e-42 165
Msa0233020 MtrunA17_Chr3g0101021 33.714 350 194 10 412 740 75 407 1.84e-42 166
Msa0233020 MtrunA17_Chr7g0258991 35.000 340 199 10 410 743 71 394 7.44e-42 164
Msa0233020 MtrunA17_Chr4g0070001 33.508 382 209 12 384 742 112 471 1.50e-40 160
Msa0233020 MtrunA17_Chr4g0036001 32.584 356 216 8 390 736 1 341 1.72e-39 157
Msa0233020 MtrunA17_Chr8g0390991 51.572 159 77 0 589 747 4 162 8.82e-39 152
Msa0233020 MtrunA17_Chr8g0372171 32.647 340 192 8 413 736 20 338 2.74e-38 153
Msa0233020 MtrunA17_Chr5g0405181 32.059 340 194 8 413 736 21 339 6.26e-38 152
Msa0233020 MtrunA17_Chr2g0331761 35.948 306 170 10 447 744 224 511 1.28e-37 150
Msa0233020 MtrunA17_Chr6g0485471 35.714 322 181 10 447 760 154 457 2.83e-37 149
Msa0233020 MtrunA17_Chr3g0142261 34.627 335 191 9 413 736 20 337 1.09e-36 149
Msa0233020 MtrunA17_Chr7g0238581 33.923 339 193 11 413 737 26 347 1.16e-36 146
Msa0233020 MtrunA17_Chr8g0390981 36.184 304 137 13 280 571 414 672 4.63e-35 142
Msa0233020 MtrunA17_Chr2g0295881 32.099 405 229 12 370 748 157 541 1.19e-34 142
Msa0233020 MtrunA17_Chr7g0269691 36.546 249 123 9 340 571 326 556 3.80e-34 138
Msa0233020 MtrunA17_Chr6g0484511 43.094 181 77 6 400 568 277 443 9.55e-34 135
Msa0233020 MtrunA17_Chr4g0067421 31.844 358 206 11 413 748 206 547 2.47e-33 137
Msa0233020 MtrunA17_Chr8g0386901 42.632 190 72 8 397 568 468 638 1.05e-31 131
Msa0233020 MtrunA17_Chr1g0187411 31.016 374 206 15 413 757 131 481 1.32e-27 119
Msa0233020 MtrunA17_Chr6g0470541 29.562 274 171 11 451 720 46 301 1.39e-17 87.8
Msa0233020 MtrunA17_Chr3g0142841 27.562 283 149 9 460 716 145 397 5.39e-17 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0233020 AT4G21270.1 62.172 801 256 8 1 762 1 793 0.0 964
Msa0233020 AT4G05190.1 62.095 802 252 10 1 762 1 790 0.0 961
Msa0233020 AT4G05190.2 63.103 767 239 7 34 762 17 777 0.0 947
Msa0233020 AT5G54670.1 56.037 762 289 5 35 762 5 754 0.0 811
Msa0233020 AT5G54670.2 56.037 762 289 5 35 762 5 754 0.0 811
Msa0233020 AT4G27180.1 55.571 736 280 6 62 762 22 745 0.0 779
Msa0233020 AT4G27180.2 55.571 736 280 6 62 762 22 745 0.0 779
Msa0233020 AT5G54670.3 57.730 705 252 5 92 762 2 694 0.0 777
Msa0233020 AT1G73860.2 47.139 367 176 6 400 758 414 770 1.61e-94 315
Msa0233020 AT1G73860.1 47.027 370 178 6 397 758 494 853 4.72e-93 313
Msa0233020 AT1G72250.2 46.277 376 186 7 379 749 470 834 1.16e-90 309
Msa0233020 AT1G72250.1 46.277 376 186 7 379 749 461 825 1.31e-90 309
Msa0233020 AT1G72250.4 46.277 376 186 7 379 749 481 845 1.31e-90 309
Msa0233020 AT1G72250.3 46.277 376 186 7 379 749 482 846 1.49e-90 309
Msa0233020 AT5G27550.2 46.438 379 194 6 376 752 96 467 1.55e-90 301
Msa0233020 AT5G27550.1 46.438 379 194 6 376 752 96 467 1.55e-90 301
Msa0233020 AT5G27000.1 42.518 421 221 11 333 747 322 727 7.62e-90 303
Msa0233020 AT1G09170.4 40.952 420 227 9 338 747 358 766 1.99e-89 300
Msa0233020 AT1G09170.3 40.952 420 227 9 338 747 358 766 2.58e-89 298
Msa0233020 AT1G09170.7 40.952 420 227 9 338 747 358 766 2.58e-89 298
Msa0233020 AT2G47500.2 40.047 422 238 7 333 747 317 730 2.68e-89 301
Msa0233020 AT2G47500.1 40.047 422 238 7 333 747 317 730 3.93e-89 301
Msa0233020 AT1G09170.2 40.952 420 227 9 338 747 358 766 7.75e-89 299
Msa0233020 AT1G18410.3 45.954 346 184 3 400 744 477 820 2.41e-88 300
Msa0233020 AT1G18410.2 45.954 346 184 3 400 744 477 820 2.41e-88 300
Msa0233020 AT1G09170.5 40.952 420 227 9 338 747 358 766 2.76e-88 300
Msa0233020 AT1G63640.5 35.325 569 339 15 194 744 236 793 8.45e-88 299
Msa0233020 AT1G63640.3 35.325 569 339 15 194 744 246 803 8.97e-88 299
Msa0233020 AT1G63640.1 35.325 569 339 15 194 744 246 803 9.79e-88 299
Msa0233020 AT1G63640.4 35.325 569 339 15 194 744 246 803 9.79e-88 299
Msa0233020 AT1G63640.2 35.325 569 332 15 194 744 246 796 5.62e-87 297
Msa0233020 AT1G18410.5 45.272 349 180 3 397 744 464 802 1.71e-86 294
Msa0233020 AT1G18410.4 45.845 349 186 3 397 744 617 963 1.72e-86 297
Msa0233020 AT2G22610.3 45.763 354 181 6 399 750 405 749 2.35e-86 295
Msa0233020 AT2G22610.1 45.763 354 181 6 399 750 404 748 2.54e-86 295
Msa0233020 AT2G22610.2 45.763 354 181 6 399 750 404 748 3.12e-86 295
Msa0233020 AT1G18410.1 45.272 349 180 3 397 744 617 955 8.22e-85 292
Msa0233020 AT5G41310.1 37.525 509 243 14 271 747 273 738 1.71e-84 288
Msa0233020 AT3G10310.2 42.655 354 188 6 400 747 351 695 3.04e-80 277
Msa0233020 AT3G10310.1 42.655 354 188 6 400 747 351 695 3.35e-80 276
Msa0233020 AT3G44730.1 40.997 361 182 6 402 747 367 711 7.33e-80 277
Msa0233020 AT3G44730.4 40.997 361 182 6 402 747 367 711 7.33e-80 277
Msa0233020 AT3G44730.2 40.997 361 182 6 402 747 412 756 9.93e-80 278
Msa0233020 AT3G44730.3 40.997 361 182 6 402 747 412 756 9.93e-80 278
Msa0233020 AT5G65930.3 39.946 373 209 7 384 753 866 1226 5.38e-78 274
Msa0233020 AT5G65930.2 39.946 373 209 7 384 753 860 1220 5.80e-78 273
Msa0233020 AT5G65930.1 39.946 373 209 7 384 753 859 1219 6.53e-78 273
Msa0233020 AT1G09170.1 38.902 419 201 9 338 747 358 730 1.22e-76 267
Msa0233020 AT1G55550.1 39.566 369 204 6 381 744 60 414 3.74e-75 261
Msa0233020 AT1G09170.6 40.263 380 206 9 338 707 358 726 1.18e-74 257
Msa0233020 AT1G09170.8 40.263 380 206 9 338 707 358 726 1.18e-74 257
Msa0233020 AT5G27950.1 38.118 425 225 11 335 742 2 405 2.17e-72 248
Msa0233020 AT3G19050.1 40.227 353 171 9 409 737 190 526 2.35e-59 219
Msa0233020 AT3G17360.1 39.595 346 177 8 412 737 168 501 4.81e-59 218
Msa0233020 AT3G17360.2 39.595 346 177 8 412 737 168 501 4.86e-59 218
Msa0233020 AT3G45850.2 39.535 344 185 10 412 737 55 393 4.87e-59 217
Msa0233020 AT3G45850.1 39.535 344 185 10 412 737 55 393 4.87e-59 217
Msa0233020 AT3G17360.3 39.595 346 177 8 412 737 168 501 5.14e-59 218
Msa0233020 AT5G65460.2 33.813 417 251 6 340 756 76 467 7.41e-59 217
Msa0233020 AT5G65460.6 33.813 417 251 6 340 756 76 467 1.16e-58 216
Msa0233020 AT5G65460.4 33.813 417 251 6 340 756 76 467 1.71e-58 216
Msa0233020 AT5G65460.1 33.813 417 251 6 340 756 76 467 1.72e-58 216
Msa0233020 AT5G65460.3 33.492 421 254 6 340 756 76 474 4.57e-58 215
Msa0233020 AT5G10470.1 33.716 436 250 8 346 758 58 477 4.31e-56 209
Msa0233020 AT5G10470.2 33.716 436 250 8 346 758 58 477 4.31e-56 209
Msa0233020 AT3G44050.1 39.826 344 179 9 412 737 93 426 4.55e-56 209
Msa0233020 AT2G28620.3 38.261 345 188 10 412 737 50 388 8.50e-55 204
Msa0233020 AT2G28620.2 38.261 345 188 10 412 737 50 388 8.50e-55 204
Msa0233020 AT2G28620.1 38.261 345 188 10 412 737 50 388 8.66e-55 204
Msa0233020 AT2G36200.1 37.666 377 201 12 412 762 12 380 1.30e-54 204
Msa0233020 AT2G36200.2 37.401 377 202 11 412 762 12 380 2.07e-54 203
Msa0233020 AT4G14150.1 38.218 348 177 12 413 738 92 423 5.70e-53 199
Msa0233020 AT2G37420.1 36.735 343 196 9 412 737 48 386 7.49e-52 196
Msa0233020 AT2G37420.2 36.735 343 196 9 412 737 48 386 7.49e-52 196
Msa0233020 AT3G10180.2 35.362 345 189 8 413 741 4 330 2.24e-51 194
Msa0233020 AT3G10180.1 35.362 345 189 8 413 741 4 330 2.55e-51 194
Msa0233020 AT1G59540.1 37.500 336 181 11 413 737 4 321 4.23e-51 192
Msa0233020 AT3G23670.2 37.356 348 180 10 413 738 97 428 7.13e-51 192
Msa0233020 AT3G23670.1 37.356 348 180 10 413 738 97 428 1.24e-50 192
Msa0233020 AT4G39050.1 36.034 358 209 9 396 749 82 423 2.36e-48 185
Msa0233020 AT3G63480.2 37.135 342 185 13 412 737 3 330 1.26e-47 176
Msa0233020 AT2G21380.2 36.390 349 198 10 405 747 97 427 1.31e-47 182
Msa0233020 AT2G21380.1 36.390 349 198 10 405 747 97 427 1.31e-47 182
Msa0233020 AT5G47820.2 35.246 366 187 12 412 737 11 366 1.47e-47 182
Msa0233020 AT5G47820.1 35.246 366 187 12 412 737 11 366 1.47e-47 182
Msa0233020 AT3G54870.2 36.577 298 163 7 457 737 149 437 1.70e-47 182
Msa0233020 AT3G54870.1 36.577 298 163 7 457 737 149 437 1.75e-47 182
Msa0233020 AT3G54870.3 36.577 298 163 7 457 737 149 437 1.81e-47 182
Msa0233020 AT3G63480.1 36.994 346 184 14 412 737 3 334 9.58e-47 173
Msa0233020 AT1G12430.1 33.989 356 196 10 413 742 71 413 9.68e-47 179
Msa0233020 AT1G12430.2 33.989 356 196 10 413 742 71 413 1.02e-46 179
Msa0233020 AT1G21730.1 36.232 345 198 9 409 747 72 400 1.71e-45 176
Msa0233020 AT3G50240.1 34.626 361 190 10 413 737 26 376 7.37e-45 174
Msa0233020 AT3G50240.4 34.626 361 190 10 413 737 26 376 8.52e-45 174
Msa0233020 AT5G06670.2 34.402 343 203 10 407 743 61 387 9.36e-45 174
Msa0233020 AT5G06670.3 34.402 343 203 10 407 743 61 387 9.36e-45 174
Msa0233020 AT1G18550.1 38.380 284 161 6 458 737 204 477 1.20e-44 172
Msa0233020 AT3G50240.2 34.626 361 190 10 413 737 26 376 1.26e-44 173
Msa0233020 AT1G01950.2 33.611 360 200 9 409 742 57 403 1.80e-44 172
Msa0233020 AT1G01950.1 33.611 360 200 9 409 742 57 403 2.22e-44 172
Msa0233020 AT1G01950.3 33.611 360 200 9 409 742 57 403 3.22e-44 172
Msa0233020 AT5G06670.5 34.402 343 203 10 407 743 61 387 3.71e-44 171
Msa0233020 AT5G06670.8 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0233020 AT5G06670.4 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0233020 AT5G06670.7 34.402 343 203 10 407 743 61 387 6.09e-44 170
Msa0233020 AT1G18370.1 36.070 341 179 11 413 737 32 349 1.03e-43 171
Msa0233020 AT5G60930.3 33.702 362 193 12 413 738 7 357 2.37e-43 170
Msa0233020 AT5G60930.2 33.702 362 193 12 413 738 7 357 2.95e-43 170
Msa0233020 AT5G06670.6 33.807 352 202 11 407 743 61 396 3.14e-43 169
Msa0233020 AT5G06670.1 33.807 352 202 11 407 743 61 396 3.14e-43 169
Msa0233020 AT5G60930.1 33.795 361 192 12 413 737 7 356 3.89e-43 169
Msa0233020 AT3G12020.4 33.824 340 203 9 410 743 67 390 8.51e-43 167
Msa0233020 AT3G12020.1 33.824 340 203 9 410 743 67 390 8.51e-43 167
Msa0233020 AT3G12020.3 33.824 340 203 9 410 743 67 390 3.12e-42 166
Msa0233020 AT3G12020.2 33.824 340 203 9 410 743 67 390 3.12e-42 166
Msa0233020 AT3G49650.1 35.505 307 183 6 458 760 66 361 2.86e-40 159
Msa0233020 AT3G51150.2 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0233020 AT3G51150.4 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0233020 AT3G51150.3 35.889 287 162 6 457 736 65 336 7.34e-40 159
Msa0233020 AT3G51150.1 35.889 287 162 6 457 736 65 336 9.06e-40 159
Msa0233020 AT3G43210.3 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0233020 AT3G43210.5 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0233020 AT3G43210.2 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0233020 AT3G43210.4 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0233020 AT3G43210.1 36.667 330 185 9 413 735 30 342 1.75e-39 157
Msa0233020 AT2G21300.2 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0233020 AT2G21300.4 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0233020 AT2G21300.3 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0233020 AT2G21300.1 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0233020 AT2G21300.5 31.944 360 211 10 390 735 1 340 1.09e-38 155
Msa0233020 AT5G66310.2 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0233020 AT5G66310.3 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0233020 AT5G66310.1 35.540 287 163 6 457 736 66 337 2.22e-38 154
Msa0233020 AT3G16060.1 35.948 306 170 9 447 744 208 495 1.12e-37 150
Msa0233020 AT4G24170.1 36.458 288 164 7 455 736 47 321 1.58e-37 151
Msa0233020 AT4G24170.2 36.458 288 164 7 455 736 47 321 1.58e-37 151
Msa0233020 AT5G27950.2 40.164 244 127 6 511 742 3 239 1.72e-37 146
Msa0233020 AT4G38950.3 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0233020 AT4G38950.5 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0233020 AT4G38950.4 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0233020 AT4G38950.1 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0233020 AT4G38950.2 33.832 334 194 9 413 736 14 330 1.86e-37 150
Msa0233020 AT3G20150.1 35.430 302 168 8 458 737 136 432 5.50e-37 150
Msa0233020 AT5G02370.1 32.440 336 198 10 412 737 20 336 6.09e-37 147
Msa0233020 AT3G20150.2 35.430 302 168 8 458 737 136 432 7.35e-37 149
Msa0233020 AT1G59540.2 39.496 238 129 7 506 737 1 229 4.15e-36 146
Msa0233020 AT1G01950.4 35.793 271 144 7 493 742 1 262 1.25e-35 145
Msa0233020 AT3G50240.3 36.201 279 143 7 497 742 3 279 1.01e-34 142
Msa0233020 AT4G14330.1 33.904 292 164 9 458 737 89 363 3.89e-31 131
Msa0233020 AT3G16630.2 32.372 312 175 8 447 740 232 525 7.93e-31 130
Msa0233020 AT3G16630.1 32.372 312 175 8 447 740 232 525 7.93e-31 130
Msa0233020 AT5G42490.2 34.764 233 132 5 457 684 55 272 2.68e-26 116
Msa0233020 AT5G42490.1 34.764 233 132 5 457 684 55 272 2.71e-26 116
Msa0233020 AT5G65460.5 33.945 218 135 2 539 756 13 221 5.70e-26 115
Msa0233020 AT3G51150.5 37.952 166 97 2 577 736 18 183 2.81e-20 96.7
Msa0233020 AT5G23910.1 27.483 302 195 11 438 738 37 315 4.30e-17 86.3
Msa0233020 AT5G23910.2 27.483 302 195 11 438 738 41 319 4.52e-17 86.3
Msa0233020 AT1G20060.2 27.368 285 181 7 448 718 153 425 1.00e-13 75.9
Msa0233020 AT1G20060.5 27.368 285 181 7 448 718 153 425 1.01e-13 75.9
Msa0233020 AT1G20060.6 27.368 285 181 7 448 718 153 425 1.02e-13 75.9
Msa0233020 AT1G20060.4 27.368 285 181 7 448 718 153 425 1.05e-13 75.5
Msa0233020 AT1G20060.8 27.368 285 181 7 448 718 153 425 1.07e-13 75.5
Msa0233020 AT1G20060.9 27.368 285 181 7 448 718 153 425 1.08e-13 75.5
Msa0233020 AT1G20060.10 27.368 285 181 7 448 718 153 425 1.15e-13 75.5
Msa0233020 AT1G20060.7 27.368 285 181 7 448 718 153 425 1.19e-13 75.5
Msa0233020 AT1G20060.3 27.368 285 181 7 448 718 153 425 1.25e-13 75.5

Find 193 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGCTCAGCTTCATTTC+TGG 0.062764 2_2:+5307860 None:intergenic
AAACTGTGTTAGATGGTTTA+AGG 0.187874 2_2:-5308731 Msa0233020:CDS
GAACTTAATGCATGCATTAT+TGG 0.191448 2_2:+5302458 None:intergenic
ATTGACTGAGAAGATGAAAA+AGG 0.208674 2_2:-5308894 Msa0233020:CDS
CAGTACAAATAATAGTATTT+TGG 0.232124 2_2:+5302794 None:intergenic
ATTATGCTAGGAATCGATTA+TGG 0.248765 2_2:+5309338 None:intergenic
TTGGTGCCCGATTCTGATTC+CGG 0.256816 2_2:+5309288 None:intergenic
CACTTCCAGCAAGATCTATC+AGG 0.288224 2_2:+5303674 None:intergenic
GCTTATGGACAAACAGGTTC+TGG 0.290734 2_2:-5304973 Msa0233020:CDS
AAAGGAAGAATCAGATAAAT+TGG 0.295961 2_2:-5308011 Msa0233020:intron
TAAAGCTTCTACTTCCTCTT+TGG 0.301265 2_2:+5308916 None:intergenic
ATAATATTGTACTTCTTTCC+AGG 0.310435 2_2:+5304669 None:intergenic
AGGACACCTTAGTTTCATTC+AGG 0.324431 2_2:+5303617 None:intergenic
GTCTTTACTCTGCGAATTAG+TGG 0.328795 2_2:-5303817 Msa0233020:CDS
CTGTGTATATAGGAATTAAA+AGG 0.332956 2_2:-5306104 Msa0233020:intron
AAAATTGCACAACACTATTC+TGG 0.333020 2_2:-5306221 Msa0233020:intron
AGGAAGTGATGGAATGTTAT+AGG 0.339095 2_2:-5307896 Msa0233020:CDS
AGGGAAATCAAGTGAACAAT+TGG 0.342209 2_2:-5306936 Msa0233020:CDS
TGCAACTTCACAAGGTTGAT+TGG 0.344479 2_2:-5302547 Msa0233020:three_prime_UTR
ACGAGAATCAGAAGCCTTCA+TGG 0.347059 2_2:+5302871 None:intergenic
ATCGCGTTTGAGAAAATGTT+AGG 0.351225 2_2:+5309364 None:intergenic
ATTCGTACGTTGGAGGGGCT+TGG 0.353658 2_2:+5309269 None:intergenic
ATTTGATAAAGTATTTAATC+AGG 0.371480 2_2:-5305788 Msa0233020:CDS
TTTGAGAAAATGTTAGGGTT+TGG 0.373091 2_2:+5309370 None:intergenic
TTGTTAACAACAACATGGTT+TGG 0.375824 2_2:-5302509 Msa0233020:three_prime_UTR
GGACAAGTACAAGCTTTAAC+TGG 0.378100 2_2:-5306986 Msa0233020:CDS
AGCAAGGTCTGCTAGCAAAA+TGG 0.382662 2_2:-5302834 Msa0233020:three_prime_UTR
CGAACCACTTCATGTCTTCC+CGG 0.385620 2_2:-5309307 Msa0233020:exon
AAGAGGATCATGTCCCCTTC+AGG 0.390744 2_2:-5303449 Msa0233020:CDS
CAAATGTAAAAGAATACTTC+TGG 0.390932 2_2:+5305806 None:intergenic
CACCGTTTGTGTTTCCGAAA+AGG 0.391802 2_2:+5306333 None:intergenic
AGACGACCGTGATCGCCAAT+TGG 0.393122 2_2:-5307008 Msa0233020:CDS
TTCCTTTGGCAGCCATGTCT+TGG 0.398463 2_2:-5303025 Msa0233020:intron
TGGTGATAACAAATCCCTTA+TGG 0.398847 2_2:+5304701 None:intergenic
CTGTCGAAAAGTGGAGCAAC+TGG 0.402225 2_2:-5303646 Msa0233020:CDS
TGCCGAAAAGGAGAAGTTAA+AGG 0.405884 2_2:-5306746 Msa0233020:intron
GCAAAATACAAAGAGTATAC+AGG 0.407369 2_2:-5306956 Msa0233020:CDS
TGGTGCCCGATTCTGATTCC+GGG 0.408148 2_2:+5309289 None:intergenic
GGTATCAAGCCTTTGAGCTC+CGG 0.414162 2_2:+5304916 None:intergenic
GTGTTGTGTTGTTCTAAGTA+TGG 0.418879 2_2:-5302751 Msa0233020:three_prime_UTR
TTGGAGTGTTGTGTTGTGTT+GGG 0.419963 2_2:+5309389 None:intergenic
GCAGTACAATAGTAGCCTTC+AGG 0.425443 2_2:-5307598 Msa0233020:CDS
GATTTCCGCCCTTCTAAAAC+AGG 0.426509 2_2:-5304577 Msa0233020:CDS
ATGTCTCTCCTTCAATTACT+TGG 0.426819 2_2:+5306251 None:intergenic
CTGAAGAAAATAAGCGTAGA+AGG 0.427604 2_2:-5309072 Msa0233020:CDS
GGGGAATCCCCTTGATACTA+AGG 0.429097 2_2:-5308873 Msa0233020:intron
GTATCAAGCCTTTGAGCTCC+GGG 0.431755 2_2:+5304917 None:intergenic
TGGTTTAAGGTAGTTGAAGA+AGG 0.432648 2_2:-5308718 Msa0233020:CDS
TCTTGGTCGAGGTGTTGAAT+TGG 0.435479 2_2:-5305988 Msa0233020:CDS
ATATCACAGCTAAATGATAC+AGG 0.436257 2_2:+5302646 None:intergenic
CCTTCATCAACAGAAGCTCT+TGG 0.439950 2_2:-5306005 Msa0233020:CDS
AAGCTTGTACTTGTCCCAAT+TGG 0.441758 2_2:+5306993 None:intergenic
TGTTAACAACAACATGGTTT+GGG 0.442290 2_2:-5302508 Msa0233020:three_prime_UTR
AAATATACAACGAGACCATA+AGG 0.443809 2_2:-5304716 Msa0233020:CDS
GAAAATAAGCGTAGAAGGAT+TGG 0.450152 2_2:-5309067 Msa0233020:CDS
TGTTTCCGAAAAGGACAAAT+CGG 0.457287 2_2:+5306342 None:intergenic
TGTCTTCCCGGAATCAGAAT+CGG 0.460343 2_2:-5309295 Msa0233020:CDS
CTAGTACAAAGCGCGCTTGA+TGG 0.460432 2_2:-5305727 Msa0233020:CDS
TTTGGAGTGTTGTGTTGTGT+TGG 0.461040 2_2:+5309388 None:intergenic
ACATGAAGTGGTTCGTAGAA+TGG 0.462754 2_2:+5309315 None:intergenic
AGAGTAAATAGTTGTGAGAT+TGG 0.463792 2_2:-5302914 Msa0233020:CDS
CTAAACCTGATAGATCTTGC+TGG 0.466294 2_2:-5303679 Msa0233020:CDS
TCTGATTCTCGTTTAAGCTA+TGG 0.468570 2_2:-5302860 Msa0233020:CDS
TATACGATGATTGGCAGGCC+TGG 0.470233 2_2:-5304943 Msa0233020:CDS
GGTAGGGGTAGGGCTCCATT+AGG 0.474237 2_2:-5309022 Msa0233020:CDS
AGAAAGATACCTTAGTATCA+AGG 0.474402 2_2:+5308864 None:intergenic
CTTTGGCAGCCATGTCTTGG+CGG 0.476725 2_2:-5303022 Msa0233020:intron
CCAAGAGCTTCTGTTGATGA+AGG 0.481684 2_2:+5306005 None:intergenic
CTCTCCAGTCGAAGATGGAT+CGG 0.481913 2_2:+5302964 None:intergenic
AGGCCTGCCAATCATCGTAT+AGG 0.484741 2_2:+5304945 None:intergenic
AAAGAGCTCCAAGTAATTGA+AGG 0.484829 2_2:-5306259 Msa0233020:CDS
AGTGTCTGATTTGTTGTTGA+GGG 0.484894 2_2:+5308997 None:intergenic
TTATGCTAGGAATCGATTAT+GGG 0.486649 2_2:+5309339 None:intergenic
GACGACCGTGATCGCCAATT+GGG 0.489134 2_2:-5307007 Msa0233020:CDS
AAGGGGATTCGTACGTTGGA+GGG 0.490945 2_2:+5309263 None:intergenic
CTTGTCCCAATTGGCGATCA+CGG 0.491249 2_2:+5307002 None:intergenic
TGGTCGTACAAGGTAGGGGT+AGG 0.497415 2_2:-5309033 Msa0233020:CDS
TAAACTGACAACCCTTCTCC+AGG 0.499188 2_2:-5303421 Msa0233020:intron
CAAGGCATTGCAAGAGCAGT+TGG 0.500827 2_2:-5307484 Msa0233020:CDS
ATGATCCTCTTTCTTTGCCA+AGG 0.501059 2_2:+5303461 None:intergenic
CGCAAACATCCACAATAGTC+AGG 0.502674 2_2:+5304610 None:intergenic
TAATCAGGAGGCTTCACAGC+AGG 0.503502 2_2:-5305773 Msa0233020:CDS
GAAGACCAGAAAAGAACTAT+AGG 0.503985 2_2:-5306307 Msa0233020:CDS
ATCTTAGGCTTCACAAGAAG+AGG 0.504465 2_2:-5307098 Msa0233020:intron
CTCAGATCCCTCGGTTGCAC+CGG 0.505367 2_2:+5308958 None:intergenic
TTATCACCAACAGAAAATCC+TGG 0.506217 2_2:-5304687 Msa0233020:CDS
CTGACTATTGTGGATGTTTG+CGG 0.506475 2_2:-5304609 Msa0233020:CDS
AAGGATTGGTGGTGAAAGAA+TGG 0.506993 2_2:-5309053 Msa0233020:CDS
GAATTGAGCTTGTAGTGGCT+TGG 0.509237 2_2:-5302702 Msa0233020:three_prime_UTR
AACACTGAACAGCAGGTTCA+AGG 0.509784 2_2:-5303706 Msa0233020:CDS
CGATGGTCCTGCAGCAGACA+TGG 0.509803 2_2:-5306039 Msa0233020:CDS
GAAATCAGCTGCTGTGCGGC+AGG 0.510505 2_2:-5307796 Msa0233020:intron
GAAAGATACCTTAGTATCAA+GGG 0.511185 2_2:+5308865 None:intergenic
GCCGGTGCCGGTGCAACCGA+GGG 0.511321 2_2:-5308965 Msa0233020:CDS
AGTCAGTCTCTGAAAGATCA+AGG 0.511671 2_2:-5304865 Msa0233020:CDS
GTCTTCCCGGAATCAGAATC+GGG 0.512430 2_2:-5309294 Msa0233020:CDS
GCAGCAGTTGAATGCCGAAA+AGG 0.513553 2_2:-5306758 Msa0233020:CDS
GGTTTAAGGTAGTTGAAGAA+GGG 0.514193 2_2:-5308717 Msa0233020:CDS
TAAAACAGGCTGCACAAAGC+AGG 0.516505 2_2:-5304563 Msa0233020:intron
TTGTACTAGCTGAGAAATCT+CGG 0.521444 2_2:+5305741 None:intergenic
TGCCGGTGCCGGTGCAACCG+AGG 0.521826 2_2:-5308966 Msa0233020:CDS
AGTGACTCTCCAGTCGAAGA+TGG 0.523019 2_2:+5302959 None:intergenic
TCTGCTGCAGGACCATCGTC+TGG 0.525629 2_2:+5306044 None:intergenic
ACTTCACAAGGTTGATTGGA+TGG 0.527446 2_2:-5302543 Msa0233020:three_prime_UTR
TTGGTGAATTCAATGATGCT+CGG 0.528027 2_2:+5308935 None:intergenic
TCGCGTTTGAGAAAATGTTA+GGG 0.528637 2_2:+5309365 None:intergenic
TAGTACAAAGCGCGCTTGAT+GGG 0.529537 2_2:-5305726 Msa0233020:CDS
TGTGGCCTCTGACATTGCTA+AGG 0.529627 2_2:+5307508 None:intergenic
AAGCTCAGCAAACCTGGAGA+AGG 0.530552 2_2:+5303409 None:intergenic
GATGCTCGGCTCAGATCCCT+CGG 0.531050 2_2:+5308949 None:intergenic
ACTAATGATGGTGCCGGTGC+CGG 0.531226 2_2:-5308977 Msa0233020:CDS
TCTCCAGTCGAAGATGGATC+GGG 0.533509 2_2:+5302965 None:intergenic
AAGAATGGTCGTACAAGGTA+GGG 0.535172 2_2:-5309038 Msa0233020:CDS
TTCTGGCTACTAGGAAGTGA+TGG 0.536458 2_2:-5307907 Msa0233020:intron
TCCCTCGGTTGCACCGGCAC+CGG 0.536812 2_2:+5308964 None:intergenic
AGTGAAAGGCTGTCGAAAAG+TGG 0.538792 2_2:-5303655 Msa0233020:CDS
ATCAAGCCTTTGAGCTCCGG+GGG 0.539773 2_2:+5304919 None:intergenic
GCGAATTAGTGGTGTTAATG+AGG 0.541828 2_2:-5303806 Msa0233020:intron
AAAGAATGGTCGTACAAGGT+AGG 0.548841 2_2:-5309039 Msa0233020:CDS
AACAAATCAGACACTAATGA+TGG 0.550885 2_2:-5308989 Msa0233020:CDS
GGGAAATCAAGTGAACAATT+GGG 0.552589 2_2:-5306935 Msa0233020:CDS
GTTGTGAGATTGGTATTCCT+CGG 0.552840 2_2:-5302904 Msa0233020:CDS
AAACCTATACGATGATTGGC+AGG 0.553852 2_2:-5304948 Msa0233020:CDS
TTGTTGTTGAGGGAACCTAA+TGG 0.555010 2_2:+5309007 None:intergenic
TCAACAGAAGCTCTTGGTCG+AGG 0.555040 2_2:-5305999 Msa0233020:CDS
ACATCCACAATAGTCAGGTC+CGG 0.563431 2_2:+5304615 None:intergenic
GAAACTACCATGTCTGCTGC+AGG 0.564380 2_2:+5306032 None:intergenic
TTTGTAGAACACTGAACAGC+AGG 0.565189 2_2:-5303713 Msa0233020:intron
TTCGTAGAATGGATTATGCT+AGG 0.565995 2_2:+5309326 None:intergenic
AATATACAACGAGACCATAA+GGG 0.569199 2_2:-5304715 Msa0233020:CDS
GGACCGCCTGAATGAAACTA+AGG 0.569652 2_2:-5303623 Msa0233020:intron
GGTGAAAGAATGGTCGTACA+AGG 0.569997 2_2:-5309043 Msa0233020:CDS
GTCGAACGCGGCAGAACACA+CGG 0.575748 2_2:+5306075 None:intergenic
TTAATTCTTGCAACTTCACA+AGG 0.576531 2_2:-5302555 Msa0233020:three_prime_UTR
AATATTATACACGATGCCAA+TGG 0.576558 2_2:-5304654 Msa0233020:CDS
GAAGGGGATTCGTACGTTGG+AGG 0.576763 2_2:+5309262 None:intergenic
TTAGAGAATTGAGCTTGTAG+TGG 0.577572 2_2:-5302707 Msa0233020:three_prime_UTR
AGGTCAACTACGAGAGAGAC+TGG 0.580028 2_2:-5306287 Msa0233020:CDS
TCAGACACTAATGATGGTGC+CGG 0.580091 2_2:-5308983 Msa0233020:CDS
AGCTAAAACAAATGCTCTCG+AGG 0.580303 2_2:-5306903 Msa0233020:intron
TGTCGAAAAGTGGAGCAACT+GGG 0.581699 2_2:-5303645 Msa0233020:CDS
GTCAGTTTAGAATTCCTGAA+GGG 0.584164 2_2:+5303435 None:intergenic
TTAGAATCTCCGCCAAGACA+TGG 0.584572 2_2:+5303013 None:intergenic
TCACCCGATCCATCTTCGAC+TGG 0.584762 2_2:-5302968 Msa0233020:CDS
CTGCGTCAAGATTTGCCTGA+AGG 0.585255 2_2:+5307583 None:intergenic
TGATAAAGTATTTAATCAGG+AGG 0.586161 2_2:-5305785 Msa0233020:CDS
AGCTCAGCAAACCTGGAGAA+GGG 0.586318 2_2:+5303410 None:intergenic
GGTCGTACAAGGTAGGGGTA+GGG 0.586709 2_2:-5309032 Msa0233020:CDS
TTCACAAGAAGAGGCTACAA+AGG 0.587878 2_2:-5307089 Msa0233020:CDS
CAAAATACAAAGAGTATACA+GGG 0.590113 2_2:-5306955 Msa0233020:CDS
CTCACAACTATTTACTCTCG+CGG 0.590699 2_2:+5302919 None:intergenic
AATAAGCGTAGAAGGATTGG+TGG 0.592815 2_2:-5309064 Msa0233020:CDS
AAGCGCGCTTGATGGGTACA+AGG 0.593192 2_2:-5305719 Msa0233020:intron
AGAATGGTCGTACAAGGTAG+GGG 0.593437 2_2:-5309037 Msa0233020:CDS
TAGTGTCTGATTTGTTGTTG+AGG 0.594810 2_2:+5308996 None:intergenic
GGCTATCACTATAGCCTCAG+TGG 0.594865 2_2:-5302681 Msa0233020:three_prime_UTR
TTTAGAAGAGAAGATTGCAA+AGG 0.598749 2_2:-5308029 Msa0233020:intron
GCTCTTGCAATGCCTTGTTG+TGG 0.599091 2_2:+5307490 None:intergenic
CAAGAGCTTCTGTTGATGAA+GGG 0.602107 2_2:+5306006 None:intergenic
AGGGGATTCGTACGTTGGAG+GGG 0.603372 2_2:+5309264 None:intergenic
GATTCCGGGAAGACATGAAG+TGG 0.608326 2_2:+5309303 None:intergenic
TAGATCTTGCTGGAAGTGAA+AGG 0.608964 2_2:-5303669 Msa0233020:CDS
GGACCATCGTCTGGTAGCAA+AGG 0.611454 2_2:+5306053 None:intergenic
CATCATTGAATTCACCAAAG+AGG 0.617313 2_2:-5308930 Msa0233020:CDS
TATCAAGCCTTTGAGCTCCG+GGG 0.618912 2_2:+5304918 None:intergenic
AGGGTGGAAGTACACAATGC+AGG 0.619320 2_2:-5304845 Msa0233020:intron
TGTCAGTTTAGAATTCCTGA+AGG 0.621418 2_2:+5303434 None:intergenic
CGACCTTTGCTACCAGACGA+TGG 0.622803 2_2:-5306056 Msa0233020:CDS
GTCAGTCTCTGAAAGATCAA+GGG 0.624613 2_2:-5304864 Msa0233020:CDS
TGTTCCGGACCTGACTATTG+TGG 0.626473 2_2:-5304619 Msa0233020:CDS
TCGGCGTCAGACATCCATGA+AGG 0.629701 2_2:-5302885 Msa0233020:CDS
TCAGTTTAGAATTCCTGAAG+GGG 0.630756 2_2:+5303436 None:intergenic
GTCGAAAAGTGGAGCAACTG+GGG 0.634783 2_2:-5303644 Msa0233020:CDS
TTCATGGATGTCTGACGCCG+AGG 0.641746 2_2:+5302887 None:intergenic
ACACCTTAGTTTCATTCAGG+CGG 0.642954 2_2:+5303620 None:intergenic
AAAGATACCTTAGTATCAAG+GGG 0.645442 2_2:+5308866 None:intergenic
AGTCTCTGAAAGATCAAGGG+TGG 0.647555 2_2:-5304861 Msa0233020:CDS
CTGGTAGCAAAGGTCGAACG+CGG 0.648482 2_2:+5306063 None:intergenic
AGTACAAGCTTTAACTGGAG+AGG 0.648667 2_2:-5306981 Msa0233020:CDS
AACAGTTGTTAACAACAACA+TGG 0.649567 2_2:-5302514 Msa0233020:three_prime_UTR
AAATCTTGACGCAGCCAGTG+CGG 0.651267 2_2:-5307574 Msa0233020:CDS
CAATGTCAGAGGCCACAACA+AGG 0.656086 2_2:-5307502 Msa0233020:CDS
GTGTTGTGTTGGGAAGAAGA+AGG 0.660426 2_2:+5309399 None:intergenic
GAGAACCTTAGCAATGTCAG+AGG 0.671074 2_2:-5307513 Msa0233020:CDS
CTTTCAGAGACTGACTAACG+AGG 0.676043 2_2:+5304872 None:intergenic
GTTTAAGCTATGGCTAAGCA+AGG 0.676128 2_2:-5302850 Msa0233020:exon
AGGAGGTATGTACTTCACAA+AGG 0.685991 2_2:-5306801 Msa0233020:CDS
TATCACAGCTAAATGATACA+GGG 0.688032 2_2:+5302647 None:intergenic
AATATCTGTTCAAGTGAACG+TGG 0.707805 2_2:+5304895 None:intergenic
GGTGTTGAATTGGCACAGAG+CGG 0.715490 2_2:-5305978 Msa0233020:intron
ATGAGAAATCAGCTGCTGTG+CGG 0.726142 2_2:-5307800 Msa0233020:CDS
TCAAGCCTTTGAGCTCCGGG+GGG 0.726851 2_2:+5304920 None:intergenic
GGGCATCAATAACACCACTG+AGG 0.797794 2_2:+5302667 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTTCTTATATTAAAATT+TGG - chr2_2:5305249-5305268 Msa0233020:intron 10.0%
!! AGTAATGAAAATAAAATAAA+AGG + chr2_2:5308539-5308558 None:intergenic 10.0%
!!! AAACTATTTACTAAGTATTT+TGG + chr2_2:5303576-5303595 None:intergenic 15.0%
!! TAAAGTAAGTTATTTAATGT+TGG - chr2_2:5304446-5304465 Msa0233020:intron 15.0%
!! ATAATACTTAATCAGTAAAA+TGG + chr2_2:5305042-5305061 None:intergenic 15.0%
!! TTCTTATATTAAAATTTGGA+TGG - chr2_2:5305253-5305272 Msa0233020:intron 15.0%
!!! TTTTTTTCAAGTTTAACTAT+TGG - chr2_2:5305322-5305341 Msa0233020:intron 15.0%
!!! TAAATCCAAATATTTTTAAC+AGG - chr2_2:5305433-5305452 Msa0233020:intron 15.0%
!!! AAATCCAAATATTTTTAACA+GGG - chr2_2:5305434-5305453 Msa0233020:intron 15.0%
!!! AACTTTATTTTTTTGTTAGA+TGG - chr2_2:5305535-5305554 Msa0233020:intron 15.0%
!!! ATTTGATAAAGTATTTAATC+AGG - chr2_2:5306112-5306131 Msa0233020:intron 15.0%
!! GAATATAAATTGAAAACTAT+AGG - chr2_2:5306273-5306292 Msa0233020:CDS 15.0%
!!! TTCTGATTTTTTCTTTAAAA+AGG - chr2_2:5306542-5306561 Msa0233020:intron 15.0%
!! ATTTATTACTAGTTGATTAA+TGG + chr2_2:5308354-5308373 None:intergenic 15.0%
!!! AAATAATAGTATTTTGGTTA+TGG + chr2_2:5309103-5309122 None:intergenic 15.0%
!! AAATTAGTGTTAAATTAGTG+TGG - chr2_2:5302754-5302773 Msa0233020:three_prime_UTR 20.0%
!!! AATTTTTAGATGCAGAAAAA+AGG - chr2_2:5302797-5302816 Msa0233020:three_prime_UTR 20.0%
!!! ATTTTTAGATGCAGAAAAAA+GGG - chr2_2:5302798-5302817 Msa0233020:three_prime_UTR 20.0%
!!! TTTTGATTTGCAGAAAAAAA+TGG - chr2_2:5303115-5303134 Msa0233020:intron 20.0%
!! ATAAGTAGATTACTTATGAT+TGG - chr2_2:5303359-5303378 Msa0233020:intron 20.0%
!! TATTCTATCACTTAAACTTT+AGG - chr2_2:5303609-5303628 Msa0233020:intron 20.0%
!! AGGTTTATTATAGAACAATA+TGG - chr2_2:5303656-5303675 Msa0233020:CDS 20.0%
!!! TAATTTGTTTTAGTTCATCT+CGG + chr2_2:5304871-5304890 None:intergenic 20.0%
!!! AATCCAAATATTTTTAACAG+GGG - chr2_2:5305435-5305454 Msa0233020:intron 20.0%
!! TGAAATTCTTATAATCGTAA+AGG + chr2_2:5306044-5306063 None:intergenic 20.0%
!! TAAGAAACAACTAAATTCTT+AGG + chr2_2:5306718-5306737 None:intergenic 20.0%
!!! TAGTTGTTTCTTAAAAAAAG+TGG - chr2_2:5306725-5306744 Msa0233020:intron 20.0%
!!! ATTTTGGTAAAATCTTTCTA+GGG - chr2_2:5306788-5306807 Msa0233020:CDS 20.0%
!!! TCATTATTTTGATTTGCATT+AGG - chr2_2:5307099-5307118 Msa0233020:intron 20.0%
!! TAGTTGAAAATGAATGATAT+TGG + chr2_2:5307488-5307507 None:intergenic 20.0%
!!! GTTAATTTTACTTGTTAACA+AGG + chr2_2:5307875-5307894 None:intergenic 20.0%
!!! ATGTTTTCATATAGTAAACA+TGG - chr2_2:5307922-5307941 Msa0233020:intron 20.0%
!! CATTAACGTTTAAAAATCAA+AGG + chr2_2:5307996-5308015 None:intergenic 20.0%
!! AGTAATAACAATGAAAATCA+AGG + chr2_2:5308306-5308325 None:intergenic 20.0%
!! CACATGATGTTAAAATTTAA+AGG + chr2_2:5308565-5308584 None:intergenic 20.0%
!!! CAGTACAAATAATAGTATTT+TGG + chr2_2:5309109-5309128 None:intergenic 20.0%
!! TTTCTAGATTTTACTCAAGT+AGG - chr2_2:5302689-5302708 Msa0233020:three_prime_UTR 25.0%
!! TTTTTAGATGCAGAAAAAAG+GGG - chr2_2:5302799-5302818 Msa0233020:three_prime_UTR 25.0%
!! CCTTTACTTATTTGTGTTTT+GGG - chr2_2:5303278-5303297 Msa0233020:intron 25.0%
!! CTGATTTTTATAGTTGCAAA+AGG - chr2_2:5303410-5303429 Msa0233020:intron 25.0%
! TCAATATATGACCAAATGAA+CGG - chr2_2:5303435-5303454 Msa0233020:CDS 25.0%
! TTTCGACTCAAATATAATCA+GGG - chr2_2:5303510-5303529 Msa0233020:intron 25.0%
!! TTAGGATAATTGATAGTCTT+TGG - chr2_2:5303627-5303646 Msa0233020:CDS 25.0%
!!! TTGATAGTCTTTGGTTTTTT+AGG - chr2_2:5303636-5303655 Msa0233020:CDS 25.0%
! AAAGGAAGAATCAGATAAAT+TGG - chr2_2:5303889-5303908 Msa0233020:intron 25.0%
! AAGAATCAGATAAATTGGTA+TGG - chr2_2:5303894-5303913 Msa0233020:intron 25.0%
! CAAAAATCAACAATTACGAA+AGG + chr2_2:5304223-5304242 None:intergenic 25.0%
!! GTACAAATTTTCATTTTCAG+TGG + chr2_2:5304250-5304269 None:intergenic 25.0%
! TGATGTGTATTGTCAATATA+TGG - chr2_2:5304495-5304514 Msa0233020:intron 25.0%
! TTCTTCTTTGAATGATTTCT+TGG - chr2_2:5304601-5304620 Msa0233020:CDS 25.0%
! GAGTACATTGGATAATAATA+TGG - chr2_2:5304640-5304659 Msa0233020:CDS 25.0%
!! CTTAACAATGTTTTTCTCAT+TGG - chr2_2:5304761-5304780 Msa0233020:intron 25.0%
! CTAAGATAATAAGAAAGCAA+TGG + chr2_2:5304789-5304808 None:intergenic 25.0%
! CATTGCTTTCTTATTATCTT+AGG - chr2_2:5304787-5304806 Msa0233020:intron 25.0%
!! CAAAATACAAAGAGTATACA+GGG - chr2_2:5304945-5304964 Msa0233020:CDS 25.0%
! AGTCAGAAATATAATGAACA+CGG + chr2_2:5305071-5305090 None:intergenic 25.0%
!! ATATTTCTGACTTTACTTGT+AGG - chr2_2:5305079-5305098 Msa0233020:intron 25.0%
! TCCTATATTATCAGTTTCTT+TGG - chr2_2:5305220-5305239 Msa0233020:intron 25.0%
! TCCAAAGAAACTGATAATAT+AGG + chr2_2:5305224-5305243 None:intergenic 25.0%
! TTATCTTATTGATGAATAGC+TGG + chr2_2:5305416-5305435 None:intergenic 25.0%
! TTTACTTCTTCTTAACTGTT+TGG - chr2_2:5305728-5305747 Msa0233020:CDS 25.0%
! ATACGTATATCTGTGTATAT+AGG - chr2_2:5305786-5305805 Msa0233020:CDS 25.0%
! CTGTGTATATAGGAATTAAA+AGG - chr2_2:5305796-5305815 Msa0233020:CDS 25.0%
! TACATGAAACTTATTCAAGA+TGG + chr2_2:5306012-5306031 None:intergenic 25.0%
! CAAATCACTTAAAAATATGC+AGG - chr2_2:5306071-5306090 Msa0233020:CDS 25.0%
! CAAATGTAAAAGAATACTTC+TGG + chr2_2:5306097-5306116 None:intergenic 25.0%
!! TGATAAAGTATTTAATCAGG+AGG - chr2_2:5306115-5306134 Msa0233020:intron 25.0%
!!! TGAAATGGATTATGTCATTT+TGG - chr2_2:5306772-5306791 Msa0233020:CDS 25.0%
!!! CATTTTGGTAAAATCTTTCT+AGG - chr2_2:5306787-5306806 Msa0233020:CDS 25.0%
! ACGAGAAAATATAACAGAAA+AGG + chr2_2:5306814-5306833 None:intergenic 25.0%
!!! CGTTATTATTTGTGTTGTTT+TGG - chr2_2:5306831-5306850 Msa0233020:intron 25.0%
! TGCAAATCAAAATAATGAGA+AGG + chr2_2:5307097-5307116 None:intergenic 25.0%
! ATAATATTGTACTTCTTTCC+AGG + chr2_2:5307234-5307253 None:intergenic 25.0%
!!! AACATATGTGTTTTTTCCAT+TGG + chr2_2:5307265-5307284 None:intergenic 25.0%
!!! AATTTTACTTGTTAACAAGG+AGG + chr2_2:5307872-5307891 None:intergenic 25.0%
! TCTTGTACATTGAAGAATTA+AGG + chr2_2:5307948-5307967 None:intergenic 25.0%
!!! CCATTTGACTCTATTTTTTT+AGG + chr2_2:5308610-5308629 None:intergenic 25.0%
! CCTAAAAAAATAGAGTCAAA+TGG - chr2_2:5308607-5308626 Msa0233020:intron 25.0%
! AGATACATGTTAGTTAAATG+GGG + chr2_2:5308698-5308717 None:intergenic 25.0%
! CAGATACATGTTAGTTAAAT+GGG + chr2_2:5308699-5308718 None:intergenic 25.0%
! TCAGATACATGTTAGTTAAA+TGG + chr2_2:5308700-5308719 None:intergenic 25.0%
!!! TAACTTTCTGTTTTTTCCTT+TGG - chr2_2:5308739-5308758 Msa0233020:CDS 25.0%
! ACAAAAGCCAATAATAAGTT+TGG + chr2_2:5308797-5308816 None:intergenic 25.0%
!! GAGTATATTTTCTTTTCCTT+TGG - chr2_2:5308821-5308840 Msa0233020:intron 25.0%
! AATGAGTAACTATTAACCAA+AGG + chr2_2:5308840-5308859 None:intergenic 25.0%
!!! AACTTTCTGTTTTTTTCCTT+TGG - chr2_2:5308861-5308880 Msa0233020:intron 25.0%
TTTGAGAAAATGTTAGGGTT+TGG + chr2_2:5302533-5302552 None:intergenic 30.0%
TTATGCTAGGAATCGATTAT+GGG + chr2_2:5302564-5302583 None:intergenic 30.0%
ATTATGCTAGGAATCGATTA+TGG + chr2_2:5302565-5302584 None:intergenic 30.0%
! TTTTAGATGCAGAAAAAAGG+GGG - chr2_2:5302800-5302819 Msa0233020:three_prime_UTR 30.0%
AACAAATCAGACACTAATGA+TGG - chr2_2:5302911-5302930 Msa0233020:CDS 30.0%
ATTGACTGAGAAGATGAAAA+AGG - chr2_2:5303006-5303025 Msa0233020:CDS 30.0%
TTGACTGAGAAGATGAAAAA+GGG - chr2_2:5303007-5303026 Msa0233020:CDS 30.0%
AAAGATACCTTAGTATCAAG+GGG + chr2_2:5303037-5303056 None:intergenic 30.0%
GAAAGATACCTTAGTATCAA+GGG + chr2_2:5303038-5303057 None:intergenic 30.0%
AGAAAGATACCTTAGTATCA+AGG + chr2_2:5303039-5303058 None:intergenic 30.0%
TTTACAAACACCAAAACTCA+GGG + chr2_2:5303078-5303097 None:intergenic 30.0%
TGGTGTTTGTAAAGCTTATA+TGG - chr2_2:5303085-5303104 Msa0233020:intron 30.0%
GGTGTTTGTAAAGCTTATAT+GGG - chr2_2:5303086-5303105 Msa0233020:intron 30.0%
GTGTTTGTAAAGCTTATATG+GGG - chr2_2:5303087-5303106 Msa0233020:intron 30.0%
GACTTAAAAACTGTGTTAGA+TGG - chr2_2:5303162-5303181 Msa0233020:intron 30.0%
AAACTGTGTTAGATGGTTTA+AGG - chr2_2:5303169-5303188 Msa0233020:intron 30.0%
!!! AGTATCAACGCATTTTTTCT+CGG + chr2_2:5303252-5303271 None:intergenic 30.0%
! GCCTTTACTTATTTGTGTTT+TGG - chr2_2:5303277-5303296 Msa0233020:intron 30.0%
CCCAAAACACAAATAAGTAA+AGG + chr2_2:5303281-5303300 None:intergenic 30.0%
!!! TGGTTTTAAGCATTGTTGTA+TGG - chr2_2:5303307-5303326 Msa0233020:intron 30.0%
! TTTTTAACCGTTGTATGCAT+AGG + chr2_2:5303484-5303503 None:intergenic 30.0%
CTTTCGACTCAAATATAATC+AGG - chr2_2:5303509-5303528 Msa0233020:intron 30.0%
ACTCAAATATAATCAGGGAA+TGG - chr2_2:5303515-5303534 Msa0233020:intron 30.0%
CTCAAATATAATCAGGGAAT+GGG - chr2_2:5303516-5303535 Msa0233020:intron 30.0%
!! TGTTTGTTGTTGTTAGTCTT+CGG - chr2_2:5303719-5303738 Msa0233020:intron 30.0%
TTTAGAAGAGAAGATTGCAA+AGG - chr2_2:5303871-5303890 Msa0233020:intron 30.0%
ATGTTGTGATTGGATATTTC+TGG - chr2_2:5303932-5303951 Msa0233020:intron 30.0%
! TGATGCTTTCTTTTGCTTTA+CGG - chr2_2:5303955-5303974 Msa0233020:intron 30.0%
ATTATACAAGTCCACAATGT+TGG - chr2_2:5304156-5304175 Msa0233020:intron 30.0%
ATCAACAATTACGAAAGGAA+GGG + chr2_2:5304218-5304237 None:intergenic 30.0%
AATCAACAATTACGAAAGGA+AGG + chr2_2:5304219-5304238 None:intergenic 30.0%
!!! TCGTAATTGTTGATTTTTGC+AGG - chr2_2:5304224-5304243 Msa0233020:intron 30.0%
!!! TAAACATTTTGAGTATCGAC+AGG + chr2_2:5304539-5304558 None:intergenic 30.0%
GAAATCGAAAATGAGTACAT+TGG - chr2_2:5304628-5304647 Msa0233020:CDS 30.0%
AAATATCAGCAAAATGCACA+AGG + chr2_2:5304711-5304730 None:intergenic 30.0%
! GCAAAATACAAAGAGTATAC+AGG - chr2_2:5304944-5304963 Msa0233020:CDS 30.0%
GTCAGAAATATAATGAACAC+GGG + chr2_2:5305070-5305089 None:intergenic 30.0%
!! TACCTTTAACTTCTCCTTTT+CGG + chr2_2:5305159-5305178 None:intergenic 30.0%
! AACAACCACAATTGGTAATA+AGG + chr2_2:5305349-5305368 None:intergenic 30.0%
TCTCCCCTGTTAAAAATATT+TGG + chr2_2:5305441-5305460 None:intergenic 30.0%
AAAATTGCACAACACTATTC+TGG - chr2_2:5305679-5305698 Msa0233020:intron 30.0%
ATGAAACTTATTCAAGATGG+TGG + chr2_2:5306009-5306028 None:intergenic 30.0%
! ATTTTTATGCATAACCAGTC+TGG + chr2_2:5306243-5306262 None:intergenic 30.0%
! GACTGGTTATGCATAAAAAT+AGG - chr2_2:5306243-5306262 Msa0233020:CDS 30.0%
TTAAAGTTGTGTAGCCATTT+CGG - chr2_2:5306386-5306405 Msa0233020:intron 30.0%
AAAACTGTAAATAGCCGAAA+TGG + chr2_2:5306403-5306422 None:intergenic 30.0%
! TCGGCTATTTACAGTTTTTA+AGG - chr2_2:5306405-5306424 Msa0233020:intron 30.0%
! CGGCTATTTACAGTTTTTAA+GGG - chr2_2:5306406-5306425 Msa0233020:intron 30.0%
AGGCATAGTTTATCTAGTAA+AGG + chr2_2:5306857-5306876 None:intergenic 30.0%
TTACTAGATAAACTATGCCT+TGG - chr2_2:5306857-5306876 Msa0233020:intron 30.0%
ACAAAGGTTTCATGGTTTAT+TGG - chr2_2:5306887-5306906 Msa0233020:intron 30.0%
CAAAGGTTTCATGGTTTATT+GGG - chr2_2:5306888-5306907 Msa0233020:intron 30.0%
AAAGGTTTCATGGTTTATTG+GGG - chr2_2:5306889-5306908 Msa0233020:intron 30.0%
! TAGGTTTGCATTTTTGCTTA+TGG - chr2_2:5306912-5306931 Msa0233020:CDS 30.0%
! ATTTTTGCTTATGGACAAAC+AGG - chr2_2:5306921-5306940 Msa0233020:CDS 30.0%
TTTGCATTAGGTACAAATGT+TGG - chr2_2:5307111-5307130 Msa0233020:intron 30.0%
TCGTGTGAATATTTATTTGC+AGG - chr2_2:5307149-5307168 Msa0233020:intron 30.0%
AAATATACAACGAGACCATA+AGG - chr2_2:5307184-5307203 Msa0233020:intron 30.0%
AATATACAACGAGACCATAA+GGG - chr2_2:5307185-5307204 Msa0233020:intron 30.0%
AATATTATACACGATGCCAA+TGG - chr2_2:5307246-5307265 Msa0233020:intron 30.0%
TGGAAAAAACACATATGTTC+CGG - chr2_2:5307266-5307285 Msa0233020:intron 30.0%
ATTGTGTTGTGAAGTTATGT+TGG - chr2_2:5307398-5307417 Msa0233020:intron 30.0%
TTGTGTTGTGAAGTTATGTT+GGG - chr2_2:5307399-5307418 Msa0233020:intron 30.0%
! AATGCGTCTGCTAATATTTT+TGG - chr2_2:5307458-5307477 Msa0233020:intron 30.0%
TGAAACAATTATACAGTACC+AGG + chr2_2:5307536-5307555 None:intergenic 30.0%
! GTGAACAATTGTGTGTTTTT+CGG + chr2_2:5307699-5307718 None:intergenic 30.0%
CTTGCATCTTCTTATTAACA+AGG + chr2_2:5307740-5307759 None:intergenic 30.0%
! GTGAACAATTGTGTGTTTTT+CGG + chr2_2:5307699-5307718 None:intergenic 30.0%
! AATGCTCTTTACATTTTTCC+AGG - chr2_2:5308012-5308031 Msa0233020:CDS 30.0%
AAACCAGACAAAAGTAAATC+AGG + chr2_2:5308170-5308189 None:intergenic 30.0%
AAAAATGACATCACTCAAAC+AGG + chr2_2:5308418-5308437 None:intergenic 30.0%
TATAATCACTCAAATGCCAA+AGG + chr2_2:5308758-5308777 None:intergenic 30.0%
GAGTGAACCAAACTTATTAT+TGG - chr2_2:5308787-5308806 Msa0233020:intron 30.0%
AGAGTAAATAGTTGTGAGAT+TGG - chr2_2:5308986-5309005 Msa0233020:CDS 30.0%
TATCACAGCTAAATGATACA+GGG + chr2_2:5309256-5309275 None:intergenic 30.0%
ATATCACAGCTAAATGATAC+AGG + chr2_2:5309257-5309276 None:intergenic 30.0%
TTAATTCTTGCAACTTCACA+AGG - chr2_2:5309345-5309364 Msa0233020:five_prime_UTR 30.0%
AACAGTTGTTAACAACAACA+TGG - chr2_2:5309386-5309405 Msa0233020:five_prime_UTR 30.0%
TTGTTAACAACAACATGGTT+TGG - chr2_2:5309391-5309410 Msa0233020:five_prime_UTR 30.0%
TGTTAACAACAACATGGTTT+GGG - chr2_2:5309392-5309411 Msa0233020:five_prime_UTR 30.0%
GAACTTAATGCATGCATTAT+TGG + chr2_2:5309445-5309464 None:intergenic 30.0%
TCGCGTTTGAGAAAATGTTA+GGG + chr2_2:5302538-5302557 None:intergenic 35.0%
ATCGCGTTTGAGAAAATGTT+AGG + chr2_2:5302539-5302558 None:intergenic 35.0%
!! TTCGTAGAATGGATTATGCT+AGG + chr2_2:5302577-5302596 None:intergenic 35.0%
TGTGAAAGAGAGAGAATGAA+GGG + chr2_2:5302658-5302677 None:intergenic 35.0%
ATGTGAAAGAGAGAGAATGA+AGG + chr2_2:5302659-5302678 None:intergenic 35.0%
CTGAAGAAAATAAGCGTAGA+AGG - chr2_2:5302828-5302847 Msa0233020:three_prime_UTR 35.0%
GAAAATAAGCGTAGAAGGAT+TGG - chr2_2:5302833-5302852 Msa0233020:three_prime_UTR 35.0%
!! AGTGTCTGATTTGTTGTTGA+GGG + chr2_2:5302906-5302925 None:intergenic 35.0%
!! TAGTGTCTGATTTGTTGTTG+AGG + chr2_2:5302907-5302926 None:intergenic 35.0%
TTGGTGAATTCAATGATGCT+CGG + chr2_2:5302968-5302987 None:intergenic 35.0%
CATCATTGAATTCACCAAAG+AGG - chr2_2:5302970-5302989 Msa0233020:CDS 35.0%
TAAAGCTTCTACTTCCTCTT+TGG + chr2_2:5302987-5303006 None:intergenic 35.0%
TGACTGAGAAGATGAAAAAG+GGG - chr2_2:5303008-5303027 Msa0233020:CDS 35.0%
CTTTACAAACACCAAAACTC+AGG + chr2_2:5303079-5303098 None:intergenic 35.0%
! TGGTTTAAGGTAGTTGAAGA+AGG - chr2_2:5303182-5303201 Msa0233020:intron 35.0%
! GGTTTAAGGTAGTTGAAGAA+GGG - chr2_2:5303183-5303202 Msa0233020:intron 35.0%
! GAGAAAAAATGCGTTGATAC+TGG - chr2_2:5303251-5303270 Msa0233020:intron 35.0%
!!! ATTTGTGTTTTGGGCATTGA+TGG - chr2_2:5303287-5303306 Msa0233020:intron 35.0%
! AAGCATTGTTGTATGGCATT+TGG - chr2_2:5303314-5303333 Msa0233020:intron 35.0%
! TTTGGTAGTAACAGTGAAGA+AGG - chr2_2:5303332-5303351 Msa0233020:intron 35.0%
AATCAAGCATTCCGTTCATT+TGG + chr2_2:5303449-5303468 None:intergenic 35.0%
ATTCGAACCTATGCATACAA+CGG - chr2_2:5303474-5303493 Msa0233020:CDS 35.0%
TCATGTTCATCTCATTCTCT+GGG + chr2_2:5303799-5303818 None:intergenic 35.0%
TTCATGTTCATCTCATTCTC+TGG + chr2_2:5303800-5303819 None:intergenic 35.0%
GAAGATAGCAGAATTGAATG+AGG - chr2_2:5303817-5303836 Msa0233020:CDS 35.0%
ATGAGGCTATATCGAATTTG+AGG - chr2_2:5303834-5303853 Msa0233020:CDS 35.0%
! TGCAATCTTCTCTTCTAAAG+AGG + chr2_2:5303870-5303889 None:intergenic 35.0%
ATCCAATCACAACATTGTTG+TGG + chr2_2:5303927-5303946 None:intergenic 35.0%
! AGGAAGTGATGGAATGTTAT+AGG - chr2_2:5304004-5304023 Msa0233020:intron 35.0%
GGTATCAAAAACCAACATTG+TGG + chr2_2:5304170-5304189 None:intergenic 35.0%
!!! TGTTGGTTTTTGATACCAGT+AGG - chr2_2:5304173-5304192 Msa0233020:intron 35.0%
AAATAATTGAGGCAACCTAC+TGG + chr2_2:5304191-5304210 None:intergenic 35.0%
TCAACAATTACGAAAGGAAG+GGG + chr2_2:5304217-5304236 None:intergenic 35.0%
!!! TTTGTTTTAGTTCATCTCGG+AGG + chr2_2:5304868-5304887 None:intergenic 35.0%
AGGGAAATCAAGTGAACAAT+TGG - chr2_2:5304964-5304983 Msa0233020:CDS 35.0%
GGGAAATCAAGTGAACAATT+GGG - chr2_2:5304965-5304984 Msa0233020:CDS 35.0%
TTTCTGACTTTACTTGTAGG+AGG - chr2_2:5305082-5305101 Msa0233020:intron 35.0%
TTGGACCTTATTACCAATTG+TGG - chr2_2:5305341-5305360 Msa0233020:intron 35.0%
AAGCAAAGAACAACCACAAT+TGG + chr2_2:5305357-5305376 None:intergenic 35.0%
GGGGAGATGATTAATATGAA+TGG - chr2_2:5305454-5305473 Msa0233020:intron 35.0%
TGTTTCCGAAAAGGACAAAT+CGG + chr2_2:5305561-5305580 None:intergenic 35.0%
GAAGACCAGAAAAGAACTAT+AGG - chr2_2:5305593-5305612 Msa0233020:intron 35.0%
! GTTGACCTATAGTTCTTTTC+TGG + chr2_2:5305601-5305620 None:intergenic 35.0%
AAAGAGCTCCAAGTAATTGA+AGG - chr2_2:5305641-5305660 Msa0233020:intron 35.0%
ATGTCTCTCCTTCAATTACT+TGG + chr2_2:5305652-5305671 None:intergenic 35.0%
CACAACACTATTCTGGTAAA+TGG - chr2_2:5305686-5305705 Msa0233020:intron 35.0%
TTGTACTAGCTGAGAAATCT+CGG + chr2_2:5306162-5306181 None:intergenic 35.0%
GAATGTTACAACTTGCAAGA+TGG - chr2_2:5306295-5306314 Msa0233020:CDS 35.0%
GATGGAAAAACACTTACTCT+TGG - chr2_2:5306313-5306332 Msa0233020:CDS 35.0%
AAAACACTTACTCTTGGCTT+TGG - chr2_2:5306319-5306338 Msa0233020:CDS 35.0%
! CTGGTAGATTCTGATTGTTT+TGG - chr2_2:5306484-5306503 Msa0233020:intron 35.0%
!! GTTCTCTAAAATGCATAGTC+TGG - chr2_2:5306600-5306619 Msa0233020:intron 35.0%
! CATAGTCTGGCACATTATTT+TGG - chr2_2:5306613-5306632 Msa0233020:intron 35.0%
!!! GGCACATTATTTTGGTCAAA+TGG - chr2_2:5306621-5306640 Msa0233020:intron 35.0%
! TGGTCAAATGGAATTTTGTC+TGG - chr2_2:5306633-5306652 Msa0233020:intron 35.0%
TAGATAAACTATGCCTTGGT+TGG - chr2_2:5306861-5306880 Msa0233020:intron 35.0%
GGAAAAACCTATACGATGAT+TGG - chr2_2:5306948-5306967 Msa0233020:CDS 35.0%
AATATCTGTTCAAGTGAACG+TGG + chr2_2:5307008-5307027 None:intergenic 35.0%
TGGTGATAACAAATCCCTTA+TGG + chr2_2:5307202-5307221 None:intergenic 35.0%
TTATCACCAACAGAAAATCC+TGG - chr2_2:5307213-5307232 Msa0233020:intron 35.0%
! TTCTTTCCAGGATTTTCTGT+TGG + chr2_2:5307222-5307241 None:intergenic 35.0%
TGTGTTGTGAAGTTATGTTG+GGG - chr2_2:5307400-5307419 Msa0233020:intron 35.0%
ATTGTAGCTATCAAGTTTCC+TGG - chr2_2:5307515-5307534 Msa0233020:CDS 35.0%
GCATCTTCTTATTAACAAGG+AGG + chr2_2:5307737-5307756 None:intergenic 35.0%
CAATGTGATTGTGTTCTTTC+TGG - chr2_2:5307970-5307989 Msa0233020:intron 35.0%
! TTACATTTTTCCAGGTCAGT+AGG - chr2_2:5308020-5308039 Msa0233020:CDS 35.0%
!! TCTCCTGATTTACTTTTGTC+TGG - chr2_2:5308164-5308183 Msa0233020:intron 35.0%
! TCAGTTTAGAATTCCTGAAG+GGG + chr2_2:5308467-5308486 None:intergenic 35.0%
! GTCAGTTTAGAATTCCTGAA+GGG + chr2_2:5308468-5308487 None:intergenic 35.0%
! TGTCAGTTTAGAATTCCTGA+AGG + chr2_2:5308469-5308488 None:intergenic 35.0%
ATATTAAAGCTCAGCAAACC+TGG + chr2_2:5308500-5308519 None:intergenic 35.0%
ATTTACACGAGAGAACATGA+GGG - chr2_2:5308668-5308687 Msa0233020:CDS 35.0%
TCTGATTCTCGTTTAAGCTA+TGG - chr2_2:5309040-5309059 Msa0233020:CDS 35.0%
! GTGTTGTGTTGTTCTAAGTA+TGG - chr2_2:5309149-5309168 Msa0233020:intron 35.0%
TTAGAGAATTGAGCTTGTAG+TGG - chr2_2:5309193-5309212 Msa0233020:intron 35.0%
!! TTGGAGTGTTGTGTTGTGTT+GGG + chr2_2:5302514-5302533 None:intergenic 40.0%
!! TTTGGAGTGTTGTGTTGTGT+TGG + chr2_2:5302515-5302534 None:intergenic 40.0%
ACATGAAGTGGTTCGTAGAA+TGG + chr2_2:5302588-5302607 None:intergenic 40.0%
GTGAAAGAGAGAGAATGAAG+GGG + chr2_2:5302657-5302676 None:intergenic 40.0%
AATAAGCGTAGAAGGATTGG+TGG - chr2_2:5302836-5302855 Msa0233020:three_prime_UTR 40.0%
!! AAGGATTGGTGGTGAAAGAA+TGG - chr2_2:5302847-5302866 Msa0233020:exon 40.0%
AAAGAATGGTCGTACAAGGT+AGG - chr2_2:5302861-5302880 Msa0233020:CDS 40.0%
AAGAATGGTCGTACAAGGTA+GGG - chr2_2:5302862-5302881 Msa0233020:CDS 40.0%
! TTGTTGTTGAGGGAACCTAA+TGG + chr2_2:5302896-5302915 None:intergenic 40.0%
! TTTACTGTCTCCCTGAGTTT+TGG - chr2_2:5303065-5303084 Msa0233020:intron 40.0%
GCAGAAAAAAATGGAGCAGA+TGG - chr2_2:5303124-5303143 Msa0233020:intron 40.0%
GAAAAAAATGGAGCAGATGG+TGG - chr2_2:5303127-5303146 Msa0233020:intron 40.0%
TGCCACAACAATGTTGTGAT+TGG - chr2_2:5303922-5303941 Msa0233020:intron 40.0%
AGCCAGAAACACGATAAATG+AGG + chr2_2:5303981-5304000 None:intergenic 40.0%
!! TTATCGTGTTTCTGGCTACT+AGG - chr2_2:5303984-5304003 Msa0233020:intron 40.0%
AACAATTACGAAAGGAAGGG+GGG + chr2_2:5304215-5304234 None:intergenic 40.0%
CAACAATTACGAAAGGAAGG+GGG + chr2_2:5304216-5304235 None:intergenic 40.0%
!!! CTCTGTTTCCAGTCGTTTTT+GGG + chr2_2:5304352-5304371 None:intergenic 40.0%
!! TCTCTGTTTCCAGTCGTTTT+TGG + chr2_2:5304353-5304372 None:intergenic 40.0%
ATTACGTGAAGTTCCTGTTG+TGG - chr2_2:5304561-5304580 Msa0233020:intron 40.0%
AATTCCAACTTGTCCACAAC+AGG + chr2_2:5304577-5304596 None:intergenic 40.0%
ATCTTAGGCTTCACAAGAAG+AGG - chr2_2:5304802-5304821 Msa0233020:intron 40.0%
TTCACAAGAAGAGGCTACAA+AGG - chr2_2:5304811-5304830 Msa0233020:intron 40.0%
AAGCTTGTACTTGTCCCAAT+TGG + chr2_2:5304910-5304929 None:intergenic 40.0%
! GGACAAGTACAAGCTTTAAC+TGG - chr2_2:5304914-5304933 Msa0233020:CDS 40.0%
! AGTACAAGCTTTAACTGGAG+AGG - chr2_2:5304919-5304938 Msa0233020:CDS 40.0%
AGCTAAAACAAATGCTCTCG+AGG - chr2_2:5304997-5305016 Msa0233020:intron 40.0%
! AGGAGGTATGTACTTCACAA+AGG - chr2_2:5305099-5305118 Msa0233020:intron 40.0%
TGCCGAAAAGGAGAAGTTAA+AGG - chr2_2:5305154-5305173 Msa0233020:intron 40.0%
! GTCCTTTTCGGAAACACAAA+CGG - chr2_2:5305565-5305584 Msa0233020:intron 40.0%
! CAAGAGCTTCTGTTGATGAA+GGG + chr2_2:5305897-5305916 None:intergenic 40.0%
ATTCACTATAAGCACCAGAC+TGG - chr2_2:5306226-5306245 Msa0233020:CDS 40.0%
! ACCATTACTCTGTTGTTTGC+TGG - chr2_2:5306515-5306534 Msa0233020:intron 40.0%
ACCAGCAAACAACAGAGTAA+TGG + chr2_2:5306519-5306538 None:intergenic 40.0%
TCCATTAACAACAGACGACA+AGG + chr2_2:5306689-5306708 None:intergenic 40.0%
GTTTCATGGTTTATTGGGGT+AGG - chr2_2:5306893-5306912 Msa0233020:intron 40.0%
AAACCTATACGATGATTGGC+AGG - chr2_2:5306952-5306971 Msa0233020:CDS 40.0%
! AGTCAGTCTCTGAAAGATCA+AGG - chr2_2:5307035-5307054 Msa0233020:CDS 40.0%
! GTCAGTCTCTGAAAGATCAA+GGG - chr2_2:5307036-5307055 Msa0233020:CDS 40.0%
GCATTAGGTACAAATGTTGG+TGG - chr2_2:5307114-5307133 Msa0233020:intron 40.0%
CTGACTATTGTGGATGTTTG+CGG - chr2_2:5307291-5307310 Msa0233020:intron 40.0%
!!! TTGTGCAGCCTGTTTTAGAA+GGG + chr2_2:5307334-5307353 None:intergenic 40.0%
!! TTTGTGCAGCCTGTTTTAGA+AGG + chr2_2:5307335-5307354 None:intergenic 40.0%
GTCTTTACTCTGCGAATTAG+TGG - chr2_2:5308083-5308102 Msa0233020:intron 40.0%
! GCGAATTAGTGGTGTTAATG+AGG - chr2_2:5308094-5308113 Msa0233020:intron 40.0%
TTTGTAGAACACTGAACAGC+AGG - chr2_2:5308187-5308206 Msa0233020:intron 40.0%
CTAAACCTGATAGATCTTGC+TGG - chr2_2:5308221-5308240 Msa0233020:intron 40.0%
TAGATCTTGCTGGAAGTGAA+AGG - chr2_2:5308231-5308250 Msa0233020:intron 40.0%
ACACCTTAGTTTCATTCAGG+CGG + chr2_2:5308283-5308302 None:intergenic 40.0%
AGGACACCTTAGTTTCATTC+AGG + chr2_2:5308286-5308305 None:intergenic 40.0%
GTTTGCCATATATGTCTGTC+AGG - chr2_2:5308374-5308393 Msa0233020:intron 40.0%
TATCGCCTGACAGACATATA+TGG + chr2_2:5308382-5308401 None:intergenic 40.0%
!!! GAGTGATGTCATTTTTGCCT+TGG - chr2_2:5308422-5308441 Msa0233020:intron 40.0%
! TTTTGCCTTGGCAAAGAAAG+AGG - chr2_2:5308434-5308453 Msa0233020:intron 40.0%
ATGATCCTCTTTCTTTGCCA+AGG + chr2_2:5308442-5308461 None:intergenic 40.0%
TTAGGAATCCTCAAGTTCTC+TGG + chr2_2:5308592-5308611 None:intergenic 40.0%
GATTTACACGAGAGAACATG+AGG - chr2_2:5308667-5308686 Msa0233020:CDS 40.0%
TTTACACGAGAGAACATGAG+GGG - chr2_2:5308669-5308688 Msa0233020:CDS 40.0%
CTCACAACTATTTACTCTCG+CGG + chr2_2:5308984-5309003 None:intergenic 40.0%
GTTGTGAGATTGGTATTCCT+CGG - chr2_2:5308996-5309015 Msa0233020:CDS 40.0%
GTTTAAGCTATGGCTAAGCA+AGG - chr2_2:5309050-5309069 Msa0233020:CDS 40.0%
! TGCAACTTCACAAGGTTGAT+TGG - chr2_2:5309353-5309372 Msa0233020:five_prime_UTR 40.0%
! ACTTCACAAGGTTGATTGGA+TGG - chr2_2:5309357-5309376 Msa0233020:five_prime_UTR 40.0%
GTGTTGTGTTGGGAAGAAGA+AGG + chr2_2:5302504-5302523 None:intergenic 45.0%
TGTCTTCCCGGAATCAGAAT+CGG - chr2_2:5302605-5302624 Msa0233020:three_prime_UTR 45.0%
AATGAAGGGGATTCGTACGT+TGG + chr2_2:5302644-5302663 None:intergenic 45.0%
TAGATGCAGAAAAAAGGGGG+TGG - chr2_2:5302803-5302822 Msa0233020:three_prime_UTR 45.0%
GGTGAAAGAATGGTCGTACA+AGG - chr2_2:5302857-5302876 Msa0233020:CDS 45.0%
AGAATGGTCGTACAAGGTAG+GGG - chr2_2:5302863-5302882 Msa0233020:CDS 45.0%
! TCAGACACTAATGATGGTGC+CGG - chr2_2:5302917-5302936 Msa0233020:CDS 45.0%
ATCCATCTAGCCAACCTAGT+GGG - chr2_2:5303688-5303707 Msa0233020:CDS 45.0%
GGCCTCATTTATCGTGTTTC+TGG - chr2_2:5303976-5303995 Msa0233020:intron 45.0%
! TTCTGGCTACTAGGAAGTGA+TGG - chr2_2:5303993-5304012 Msa0233020:intron 45.0%
CATCTGCTCAGCTTCATTTC+TGG + chr2_2:5304043-5304062 None:intergenic 45.0%
ATGAGAAATCAGCTGCTGTG+CGG - chr2_2:5304100-5304119 Msa0233020:intron 45.0%
GGAAGGGGGGAAAATAATTG+AGG + chr2_2:5304202-5304221 None:intergenic 45.0%
GCAGTACAATAGTAGCCTTC+AGG - chr2_2:5304302-5304321 Msa0233020:intron 45.0%
GAGAACCTTAGCAATGTCAG+AGG - chr2_2:5304387-5304406 Msa0233020:intron 45.0%
AGTTCCTGTTGTGGACAAGT+TGG - chr2_2:5304570-5304589 Msa0233020:CDS 45.0%
!!! GATGGCCGATTTGTCCTTTT+CGG - chr2_2:5305553-5305572 Msa0233020:intron 45.0%
CACCGTTTGTGTTTCCGAAA+AGG + chr2_2:5305570-5305589 None:intergenic 45.0%
! CCAAGAGCTTCTGTTGATGA+AGG + chr2_2:5305898-5305917 None:intergenic 45.0%
CCTTCATCAACAGAAGCTCT+TGG - chr2_2:5305895-5305914 Msa0233020:intron 45.0%
!! TCTTGGTCGAGGTGTTGAAT+TGG - chr2_2:5305912-5305931 Msa0233020:intron 45.0%
TAGTACAAAGCGCGCTTGAT+GGG - chr2_2:5306174-5306193 Msa0233020:intron 45.0%
GGAGACTTGCACAATTCTGT+TGG - chr2_2:5306340-5306359 Msa0233020:CDS 45.0%
AATCTACCAGCAAGCAACAG+AGG + chr2_2:5306474-5306493 None:intergenic 45.0%
GCCTTGTCGTCTGTTGTTAA+TGG - chr2_2:5306685-5306704 Msa0233020:intron 45.0%
!! ATTTCAGTGCTGCTTCGTGA+AGG + chr2_2:5306758-5306777 None:intergenic 45.0%
! TTCACGAAGCAGCACTGAAA+TGG - chr2_2:5306757-5306776 Msa0233020:CDS 45.0%
AAACCTTTGTCAGCCAACCA+AGG + chr2_2:5306877-5306896 None:intergenic 45.0%
GTTGGCTGACAAAGGTTTCA+TGG - chr2_2:5306879-5306898 Msa0233020:intron 45.0%
GCTTATGGACAAACAGGTTC+TGG - chr2_2:5306927-5306946 Msa0233020:CDS 45.0%
CTTTCAGAGACTGACTAACG+AGG + chr2_2:5307031-5307050 None:intergenic 45.0%
! AGTCTCTGAAAGATCAAGGG+TGG - chr2_2:5307039-5307058 Msa0233020:CDS 45.0%
ACATCCACAATAGTCAGGTC+CGG + chr2_2:5307288-5307307 None:intergenic 45.0%
CGCAAACATCCACAATAGTC+AGG + chr2_2:5307293-5307312 None:intergenic 45.0%
!! GATTTCCGCCCTTCTAAAAC+AGG - chr2_2:5307323-5307342 Msa0233020:intron 45.0%
TAAAACAGGCTGCACAAAGC+AGG - chr2_2:5307337-5307356 Msa0233020:intron 45.0%
CACTGTGGCACATATTTGTC+TGG + chr2_2:5307434-5307453 None:intergenic 45.0%
AACACTGAACAGCAGGTTCA+AGG - chr2_2:5308194-5308213 Msa0233020:intron 45.0%
CACTTCCAGCAAGATCTATC+AGG + chr2_2:5308229-5308248 None:intergenic 45.0%
AGTGAAAGGCTGTCGAAAAG+TGG - chr2_2:5308245-5308264 Msa0233020:intron 45.0%
TGTCGAAAAGTGGAGCAACT+GGG - chr2_2:5308255-5308274 Msa0233020:intron 45.0%
TAAACTGACAACCCTTCTCC+AGG - chr2_2:5308479-5308498 Msa0233020:intron 45.0%
TTAGAATCTCCGCCAAGACA+TGG + chr2_2:5308890-5308909 None:intergenic 45.0%
ACGAGAATCAGAAGCCTTCA+TGG + chr2_2:5309032-5309051 None:intergenic 45.0%
AGCAAGGTCTGCTAGCAAAA+TGG - chr2_2:5309066-5309085 Msa0233020:CDS 45.0%
GAATTGAGCTTGTAGTGGCT+TGG - chr2_2:5309198-5309217 Msa0233020:intron 45.0%
CGAACCACTTCATGTCTTCC+CGG - chr2_2:5302593-5302612 Msa0233020:three_prime_UTR 50.0%
GATTCCGGGAAGACATGAAG+TGG + chr2_2:5302600-5302619 None:intergenic 50.0%
GTCTTCCCGGAATCAGAATC+GGG - chr2_2:5302606-5302625 Msa0233020:three_prime_UTR 50.0%
! TTGGTGCCCGATTCTGATTC+CGG + chr2_2:5302615-5302634 None:intergenic 50.0%
AAGGGGATTCGTACGTTGGA+GGG + chr2_2:5302640-5302659 None:intergenic 50.0%
GGGGAATCCCCTTGATACTA+AGG - chr2_2:5303027-5303046 Msa0233020:intron 50.0%
GATCCATCTAGCCAACCTAG+TGG - chr2_2:5303687-5303706 Msa0233020:CDS 50.0%
CAAACAAGCCTTCTCCCACT+AGG + chr2_2:5303705-5303724 None:intergenic 50.0%
CTGCGTCAAGATTTGCCTGA+AGG + chr2_2:5304320-5304339 None:intergenic 50.0%
AAATCTTGACGCAGCCAGTG+CGG - chr2_2:5304326-5304345 Msa0233020:intron 50.0%
TGTGGCCTCTGACATTGCTA+AGG + chr2_2:5304395-5304414 None:intergenic 50.0%
CAATGTCAGAGGCCACAACA+AGG - chr2_2:5304398-5304417 Msa0233020:intron 50.0%
! GCTCTTGCAATGCCTTGTTG+TGG + chr2_2:5304413-5304432 None:intergenic 50.0%
!! CAAGGCATTGCAAGAGCAGT+TGG - chr2_2:5304416-5304435 Msa0233020:intron 50.0%
CTTGTCCCAATTGGCGATCA+CGG + chr2_2:5304901-5304920 None:intergenic 50.0%
GCAGCAGTTGAATGCCGAAA+AGG - chr2_2:5305142-5305161 Msa0233020:intron 50.0%
AGGTCAACTACGAGAGAGAC+TGG - chr2_2:5305613-5305632 Msa0233020:intron 50.0%
GAAACTACCATGTCTGCTGC+AGG + chr2_2:5305871-5305890 None:intergenic 50.0%
TCAACAGAAGCTCTTGGTCG+AGG - chr2_2:5305901-5305920 Msa0233020:intron 50.0%
! GGTGTTGAATTGGCACAGAG+CGG - chr2_2:5305922-5305941 Msa0233020:intron 50.0%
TAATCAGGAGGCTTCACAGC+AGG - chr2_2:5306127-5306146 Msa0233020:intron 50.0%
CTAGTACAAAGCGCGCTTGA+TGG - chr2_2:5306173-5306192 Msa0233020:intron 50.0%
! ACCATTCCTCTGTTGCTTGC+TGG - chr2_2:5306465-5306484 Msa0233020:intron 50.0%
ACCAGCAAGCAACAGAGGAA+TGG + chr2_2:5306469-5306488 None:intergenic 50.0%
! ACGACAAGGCATCAAGCACA+AGG + chr2_2:5306675-5306694 None:intergenic 50.0%
! ATGCCTTGGTTGGCTGACAA+AGG - chr2_2:5306871-5306890 Msa0233020:intron 50.0%
AGGCCTGCCAATCATCGTAT+AGG + chr2_2:5306958-5306977 None:intergenic 50.0%
TATACGATGATTGGCAGGCC+TGG - chr2_2:5306957-5306976 Msa0233020:CDS 50.0%
TATCAAGCCTTTGAGCTCCG+GGG + chr2_2:5306985-5307004 None:intergenic 50.0%
GTATCAAGCCTTTGAGCTCC+GGG + chr2_2:5306986-5307005 None:intergenic 50.0%
GGTATCAAGCCTTTGAGCTC+CGG + chr2_2:5306987-5307006 None:intergenic 50.0%
! AGGGTGGAAGTACACAATGC+AGG - chr2_2:5307055-5307074 Msa0233020:CDS 50.0%
TGTTCCGGACCTGACTATTG+TGG - chr2_2:5307281-5307300 Msa0233020:intron 50.0%
!!! TGCAGCCTGTTTTAGAAGGG+CGG + chr2_2:5307331-5307350 None:intergenic 50.0%
GCAGACGCATTATTGCACTG+TGG + chr2_2:5307449-5307468 None:intergenic 50.0%
CTGTGTTCTTCCTACTGACC+TGG + chr2_2:5308033-5308052 None:intergenic 50.0%
CTGTCGAAAAGTGGAGCAAC+TGG - chr2_2:5308254-5308273 Msa0233020:intron 50.0%
GTCGAAAAGTGGAGCAACTG+GGG - chr2_2:5308256-5308275 Msa0233020:intron 50.0%
GGACCGCCTGAATGAAACTA+AGG - chr2_2:5308277-5308296 Msa0233020:intron 50.0%
AAGAGGATCATGTCCCCTTC+AGG - chr2_2:5308451-5308470 Msa0233020:intron 50.0%
AGCTCAGCAAACCTGGAGAA+GGG + chr2_2:5308493-5308512 None:intergenic 50.0%
AAGCTCAGCAAACCTGGAGA+AGG + chr2_2:5308494-5308513 None:intergenic 50.0%
TGTGAGTGCCAGAGAACTTG+AGG - chr2_2:5308581-5308600 Msa0233020:intron 50.0%
TTCCTTTGGCAGCCATGTCT+TGG - chr2_2:5308875-5308894 Msa0233020:CDS 50.0%
TCTCCAGTCGAAGATGGATC+GGG + chr2_2:5308938-5308957 None:intergenic 50.0%
CTCTCCAGTCGAAGATGGAT+CGG + chr2_2:5308939-5308958 None:intergenic 50.0%
AGTGACTCTCCAGTCGAAGA+TGG + chr2_2:5308944-5308963 None:intergenic 50.0%
GGCTATCACTATAGCCTCAG+TGG - chr2_2:5309219-5309238 Msa0233020:intron 50.0%
GGGCATCAATAACACCACTG+AGG + chr2_2:5309236-5309255 None:intergenic 50.0%
TGGTGCCCGATTCTGATTCC+GGG + chr2_2:5302614-5302633 None:intergenic 55.0%
ATTCGTACGTTGGAGGGGCT+TGG + chr2_2:5302634-5302653 None:intergenic 55.0%
AGGGGATTCGTACGTTGGAG+GGG + chr2_2:5302639-5302658 None:intergenic 55.0%
GAAGGGGATTCGTACGTTGG+AGG + chr2_2:5302641-5302660 None:intergenic 55.0%
TGGTCGTACAAGGTAGGGGT+AGG - chr2_2:5302867-5302886 Msa0233020:CDS 55.0%
GGTCGTACAAGGTAGGGGTA+GGG - chr2_2:5302868-5302887 Msa0233020:CDS 55.0%
!! ACTAATGATGGTGCCGGTGC+CGG - chr2_2:5302923-5302942 Msa0233020:CDS 55.0%
! CTCCCACTAGGTTGGCTAGA+TGG + chr2_2:5303693-5303712 None:intergenic 55.0%
CTAGCCAACCTAGTGGGAGA+AGG - chr2_2:5303694-5303713 Msa0233020:CDS 55.0%
CAAGCCTTCTCCCACTAGGT+TGG + chr2_2:5303701-5303720 None:intergenic 55.0%
AGACGACCGTGATCGCCAAT+TGG - chr2_2:5304892-5304911 Msa0233020:CDS 55.0%
GACGACCGTGATCGCCAATT+GGG - chr2_2:5304893-5304912 Msa0233020:CDS 55.0%
CTGGTAGCAAAGGTCGAACG+CGG + chr2_2:5305840-5305859 None:intergenic 55.0%
CGACCTTTGCTACCAGACGA+TGG - chr2_2:5305844-5305863 Msa0233020:intron 55.0%
GGACCATCGTCTGGTAGCAA+AGG + chr2_2:5305850-5305869 None:intergenic 55.0%
! AAGCGCGCTTGATGGGTACA+AGG - chr2_2:5306181-5306200 Msa0233020:intron 55.0%
ATCAAGCCTTTGAGCTCCGG+GGG + chr2_2:5306984-5307003 None:intergenic 55.0%
CTTTGGCAGCCATGTCTTGG+CGG - chr2_2:5308878-5308897 Msa0233020:CDS 55.0%
TCACCCGATCCATCTTCGAC+TGG - chr2_2:5308932-5308951 Msa0233020:CDS 55.0%
TTCATGGATGTCTGACGCCG+AGG + chr2_2:5309016-5309035 None:intergenic 55.0%
TCGGCGTCAGACATCCATGA+AGG - chr2_2:5309015-5309034 Msa0233020:CDS 55.0%
GGTAGGGGTAGGGCTCCATT+AGG - chr2_2:5302878-5302897 Msa0233020:CDS 60.0%
CTCAGATCCCTCGGTTGCAC+CGG + chr2_2:5302945-5302964 None:intergenic 60.0%
GATGCTCGGCTCAGATCCCT+CGG + chr2_2:5302954-5302973 None:intergenic 60.0%
GAAATCAGCTGCTGTGCGGC+AGG - chr2_2:5304104-5304123 Msa0233020:intron 60.0%
!!! CAGTCGTTTTTGGGCCGCAC+TGG + chr2_2:5304343-5304362 None:intergenic 60.0%
CAGTGCGGCCCAAAAACGAC+TGG - chr2_2:5304341-5304360 Msa0233020:intron 60.0%
GTCGAACGCGGCAGAACACA+CGG + chr2_2:5305828-5305847 None:intergenic 60.0%
TCTGCTGCAGGACCATCGTC+TGG + chr2_2:5305859-5305878 None:intergenic 60.0%
CGATGGTCCTGCAGCAGACA+TGG - chr2_2:5305861-5305880 Msa0233020:intron 60.0%
TCAAGCCTTTGAGCTCCGGG+GGG + chr2_2:5306983-5307002 None:intergenic 60.0%
CGCCAAGACATGGCTGCCAA+AGG + chr2_2:5308880-5308899 None:intergenic 60.0%
! TCCCTCGGTTGCACCGGCAC+CGG + chr2_2:5302939-5302958 None:intergenic 70.0%
!! TGCCGGTGCCGGTGCAACCG+AGG - chr2_2:5302934-5302953 Msa0233020:CDS 75.0%
!! GCCGGTGCCGGTGCAACCGA+GGG - chr2_2:5302935-5302954 Msa0233020:CDS 75.0%
GATTGGCAGGCCTGGCCCCC+CGG - chr2_2:5306965-5306984 Msa0233020:CDS 75.0%
CCTTTGAGCTCCGGGGGGCC+AGG + chr2_2:5306978-5306997 None:intergenic 75.0%
CCTGGCCCCCCGGAGCTCAA+AGG - chr2_2:5306975-5306994 Msa0233020:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 5302448 5309474 5302448 ID=Msa0233020;Name=Msa0233020
chr2_2 mRNA 5302448 5309474 5302448 ID=Msa0233020-mRNA-1;Parent=Msa0233020;Name=Msa0233020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=156|0.93|0.94|1|0.87|0.88|17|408|762
chr2_2 exon 5302448 5303035 5302448 ID=Msa0233020-mRNA-1:exon:2325;Parent=Msa0233020-mRNA-1
chr2_2 exon 5303422 5303526 5303422 ID=Msa0233020-mRNA-1:exon:2324;Parent=Msa0233020-mRNA-1
chr2_2 exon 5303624 5303728 5303624 ID=Msa0233020-mRNA-1:exon:2323;Parent=Msa0233020-mRNA-1
chr2_2 exon 5303807 5303888 5303807 ID=Msa0233020-mRNA-1:exon:2322;Parent=Msa0233020-mRNA-1
chr2_2 exon 5304564 5304751 5304564 ID=Msa0233020-mRNA-1:exon:2321;Parent=Msa0233020-mRNA-1
chr2_2 exon 5304846 5305007 5304846 ID=Msa0233020-mRNA-1:exon:2320;Parent=Msa0233020-mRNA-1
chr2_2 exon 5305720 5305829 5305720 ID=Msa0233020-mRNA-1:exon:2319;Parent=Msa0233020-mRNA-1
chr2_2 exon 5305979 5306114 5305979 ID=Msa0233020-mRNA-1:exon:2318;Parent=Msa0233020-mRNA-1
chr2_2 exon 5306222 5306368 5306222 ID=Msa0233020-mRNA-1:exon:2317;Parent=Msa0233020-mRNA-1
chr2_2 exon 5306747 5306821 5306747 ID=Msa0233020-mRNA-1:exon:2316;Parent=Msa0233020-mRNA-1
chr2_2 exon 5306904 5307113 5306904 ID=Msa0233020-mRNA-1:exon:2315;Parent=Msa0233020-mRNA-1
chr2_2 exon 5307473 5307676 5307473 ID=Msa0233020-mRNA-1:exon:2314;Parent=Msa0233020-mRNA-1
chr2_2 exon 5307797 5307916 5307797 ID=Msa0233020-mRNA-1:exon:2313;Parent=Msa0233020-mRNA-1
chr2_2 exon 5308012 5308046 5308012 ID=Msa0233020-mRNA-1:exon:2312;Parent=Msa0233020-mRNA-1
chr2_2 exon 5308650 5308794 5308650 ID=Msa0233020-mRNA-1:exon:2311;Parent=Msa0233020-mRNA-1
chr2_2 exon 5308874 5309116 5308874 ID=Msa0233020-mRNA-1:exon:2310;Parent=Msa0233020-mRNA-1
chr2_2 exon 5309277 5309474 5309277 ID=Msa0233020-mRNA-1:exon:2309;Parent=Msa0233020-mRNA-1
chr2_2 five_prime_UTR 5309319 5309474 5309319 ID=Msa0233020-mRNA-1:five_prime_utr;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5309277 5309318 5309277 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5308874 5309116 5308874 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5308650 5308794 5308650 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5308012 5308046 5308012 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5307797 5307916 5307797 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5307473 5307676 5307473 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5306904 5307113 5306904 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5306747 5306821 5306747 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5306222 5306368 5306222 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5305979 5306114 5305979 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5305720 5305829 5305720 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5304846 5305007 5304846 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5304564 5304751 5304564 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5303807 5303888 5303807 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5303624 5303728 5303624 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5303422 5303526 5303422 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 CDS 5302856 5303035 5302856 ID=Msa0233020-mRNA-1:cds;Parent=Msa0233020-mRNA-1
chr2_2 three_prime_UTR 5302448 5302855 5302448 ID=Msa0233020-mRNA-1:three_prime_utr;Parent=Msa0233020-mRNA-1
Gene Sequence

>Msa0233020

ATGTCTTCCCGGAATCAGAATCGGGCACCAAGCCCCTCCAACATGCAGAAAAAAGGGGGTGGTGCTGAAGAAAATAAGCGTAGAAGGATTGGTGGTGAAAGAATGGTCGTACAAGGTAGGGGTAGGGCTCCATTAGGTTCCCTCAACAACAAATCAGACACTAATGATGGTGCCGGTGCCGGTGCAACCGAGGGATCTGAGCCGAGCATCATTGAATTCACCAAAGAGGAAGTAGAAGCTTTATTGACTGAGAAGATGAAAAAGGGGAATCCCCTTGATACTAAGAAAAAAATGGAGCAGATGGTGGATCTTATCAAGCGACTTAAAAACTGTGTTAGATGGTTTAAGGTAGTTGAAGAAGGGTATATTAAAGAAAAAGAAAAGCTTCAGACAGATCTAGAATCTGCCGAGAAAAAATGCGTTGATACTGAAGAGAAGATTGCAAAGGAAGAATCAGATAAATTGGAAGTGATGGAATGTTATAGGAAAGAAAAAGAAGCCAGAAATGAAGCTGAGCAGATGCAAGTTTCTCTTTCAACTGAACTTGAGAGAGTTTGCAATGAGAAATCAGCTGCTGTGCGGCAGGCCACTGAAAATGAAAATTTGTACAATAGATCAAAAGAGTATAATATCAGTTTGCAGCAGTACAATAGTAGCCTTCAGGCAAATCTTGACGCAGCCAGTGCGGCCCAAAAACGACTGGAAACAGAGAAATCAAGTATTGTTGAGAACCTTAGCAATGTCAGAGGCCACAACAAGGCATTGCAAGAGCAGTTGGCATCTCATAAAGCTTCACAAGAAGAGGCTACAAAGGCAAAAGACATGTTAGCTAATGAACTCAAATGCCTCCGAGATGAACTAAAACAAATTAGAGACGACCGTGATCGCCAATTGGGACAAGTACAAGCTTTAACTGGAGAGGTAGCAAAATACAAAGAGTATACAGGGAAATCAAGTGAACAATTGGGTACATTGACAGCTAAAACAAATGCTCTCGAGGAGGTATGTACTTCACAAAGGCAACAAATAGATATGTTGCAGCAGCAGTTGAATGCCGAAAAGGAGAAGTTAAAGATGGCCGATTTGTCCTTTTCGGAAACACAAACGGTGTTTGAAGACCAGAAAAGAACTATAGGTCAACTACGAGAGAGACTGGCTGAAAAAGAGCTCCAAGTAATTGAAGGAGAGACATTACGTAAAAAATTGCACAACACTATTCTGGAATTAAAAGGAAATATCCGTGTGTTCTGCCGCGTTCGACCTTTGCTACCAGACGATGGTCCTGCAGCAGACATGGTAGTTTCTTTCCCTTCATCAACAGAAGCTCTTGGTCGAGGTGTTGAATTGGCACAGAGCGGCCAGAAGTATTCTTTTACATTTGATAAAGTATTTAATCAGGAGGCTTCACAGCAGGATGTTTTCACCGAGATTTCTCAGCTAGTACAAAGCGCGCTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACGATGATTGGCAGGCCTGGCCCCCCGGAGCTCAAAGGCTTGATACCACGTTCACTTGAACAGATATTCCTCGTTAGTCAGTCTCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCTTCAGTACTTGAAATATACAACGAGACCATAAGGGATTTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTATACACGATGCCAATGGAAAAAACACATATGTTCCGGACCTGACTATTGTGGATGTTTGCGGTGCAGATGAGATTTCCGCCCTTCTAAAACAGGCTGCACAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAATCGTCGCGAAGTCACTTTGTCTTTACTCTGCGAATTAGTGGTGTTAATGAGAACACTGAACAGCAGGTTCAAGGTGTGCTAAACCTGATAGATCTTGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACTGGGGACCGCCTGAATGAAACTAAGGCGATAAACAAAAGTCTCTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTCAGGAATTCTAAACTGACAACCCTTCTCCAGCCATGTCTTGGCGGAGATTCTAAGACTTTGATGTTTGTAAATATTTCACCCGATCCATCTTCGACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCCGCGAGAGTAAATAGTTGTGAGATTGGTATTCCTCGGCGTCAGACATCCATGAAGGCTTCTGATTCTCGTTTAAGCTATGGCTAA

Protein sequence

>Msa0233020

MSSRNQNRAPSPSNMQKKGGGAEENKRRRIGGERMVVQGRGRAPLGSLNNKSDTNDGAGAGATEGSEPSIIEFTKEEVEALLTEKMKKGNPLDTKKKMEQMVDLIKRLKNCVRWFKVVEEGYIKEKEKLQTDLESAEKKCVDTEEKIAKEESDKLEVMECYRKEKEARNEAEQMQVSLSTELERVCNEKSAAVRQATENENLYNRSKEYNISLQQYNSSLQANLDAASAAQKRLETEKSSIVENLSNVRGHNKALQEQLASHKASQEEATKAKDMLANELKCLRDELKQIRDDRDRQLGQVQALTGEVAKYKEYTGKSSEQLGTLTAKTNALEEVCTSQRQQIDMLQQQLNAEKEKLKMADLSFSETQTVFEDQKRTIGQLRERLAEKELQVIEGETLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTEALGRGVELAQSGQKYSFTFDKVFNQEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQSLKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIIHDANGKNTYVPDLTIVDVCGADEISALLKQAAQSRSVGRTQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSMKASDSRLSYG*