Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944010 | sp|Q60EW9|FTIP7_ORYSJ | 51.634 | 765 | 324 | 13 | 271 | 1009 | 30 | 774 | 0.0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944010 | A0A072U8X0 | 97.522 | 1009 | 25 | 0 | 1 | 1009 | 1 | 1009 | 0.0 | 2029 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0944010 | 0.813773 | 2.160397e-51 | -8.615850e-47 |
| Msa0029380 | Msa0944010 | 0.818446 | 1.952121e-52 | -8.615850e-47 |
| Msa0048510 | Msa0944010 | 0.812912 | 3.338396e-51 | -8.615850e-47 |
| Msa0050150 | Msa0944010 | 0.800147 | 1.651457e-48 | -8.615850e-47 |
| Msa0053070 | Msa0944010 | 0.812481 | 4.147761e-51 | -8.615850e-47 |
| Msa0062340 | Msa0944010 | 0.827994 | 1.150330e-54 | -8.615850e-47 |
| Msa0077340 | Msa0944010 | 0.815851 | 7.477875e-52 | -8.615850e-47 |
| Msa0077560 | Msa0944010 | 0.858504 | 7.875137e-63 | -8.615850e-47 |
| Msa0082020 | Msa0944010 | 0.800435 | 1.443063e-48 | -8.615850e-47 |
| Msa0094780 | Msa0944010 | 0.806890 | 6.601582e-50 | -8.615850e-47 |
| Msa0098410 | Msa0944010 | 0.802156 | 6.411121e-49 | -8.615850e-47 |
| Msa0110200 | Msa0944010 | 0.839429 | 1.592616e-57 | -8.615850e-47 |
| Msa0607800 | Msa0944010 | 0.862850 | 3.784514e-64 | -8.615850e-47 |
| Msa0613580 | Msa0944010 | 0.811581 | 6.519097e-51 | -8.615850e-47 |
| Msa0615630 | Msa0944010 | 0.801032 | 1.090393e-48 | -8.615850e-47 |
| Msa0621320 | Msa0944010 | 0.826866 | 2.144795e-54 | -8.615850e-47 |
| Msa0621710 | Msa0944010 | 0.812736 | 3.648323e-51 | -8.615850e-47 |
| Msa0625620 | Msa0944010 | 0.803892 | 2.806687e-49 | -8.615850e-47 |
| Msa0630440 | Msa0944010 | 0.811088 | 8.338886e-51 | -8.615850e-47 |
| Msa0641990 | Msa0944010 | 0.853422 | 2.414276e-61 | -8.615850e-47 |
| Msa0648040 | Msa0944010 | 0.856402 | 3.295553e-62 | -8.615850e-47 |
| Msa0658640 | Msa0944010 | 0.801290 | 9.655636e-49 | -8.615850e-47 |
| Msa0681050 | Msa0944010 | 0.839102 | 1.936781e-57 | -8.615850e-47 |
| Msa0688380 | Msa0944010 | 0.803557 | 3.292718e-49 | -8.615850e-47 |
| Msa0690740 | Msa0944010 | 0.847008 | 1.517518e-59 | -8.615850e-47 |
| Msa0703600 | Msa0944010 | 0.817415 | 3.337903e-52 | -8.615850e-47 |
| Msa0703950 | Msa0944010 | 0.812403 | 4.314783e-51 | -8.615850e-47 |
| Msa0705680 | Msa0944010 | 0.803767 | 2.979643e-49 | -8.615850e-47 |
| Msa0707260 | Msa0944010 | 0.847069 | 1.460256e-59 | -8.615850e-47 |
| Msa0709200 | Msa0944010 | 0.816880 | 4.401098e-52 | -8.615850e-47 |
| Msa0709440 | Msa0944010 | 0.851129 | 1.085118e-60 | -8.615850e-47 |
| Msa0714520 | Msa0944010 | 0.801186 | 1.013917e-48 | -8.615850e-47 |
| Msa0714790 | Msa0944010 | 0.806492 | 8.014461e-50 | -8.615850e-47 |
| Msa0716890 | Msa0944010 | 0.802624 | 5.135323e-49 | -8.615850e-47 |
| Msa0717830 | Msa0944010 | 0.819315 | 1.239073e-52 | -8.615850e-47 |
| Msa0735780 | Msa0944010 | 0.815082 | 1.109361e-51 | -8.615850e-47 |
| Msa0743440 | Msa0944010 | 0.825498 | 4.537007e-54 | -8.615850e-47 |
| Msa0745140 | Msa0944010 | 0.807620 | 4.625296e-50 | -8.615850e-47 |
| Msa0747740 | Msa0944010 | 0.800543 | 1.372240e-48 | -8.615850e-47 |
| Msa0754430 | Msa0944010 | 0.862142 | 6.249024e-64 | -8.615850e-47 |
| Msa0754450 | Msa0944010 | 0.842008 | 3.361505e-58 | -8.615850e-47 |
| Msa0758590 | Msa0944010 | 0.822279 | 2.579087e-53 | -8.615850e-47 |
| Msa0773630 | Msa0944010 | 0.807028 | 6.172548e-50 | -8.615850e-47 |
| Msa0776640 | Msa0944010 | 0.809113 | 2.221763e-50 | -8.615850e-47 |
| Msa0780910 | Msa0944010 | 0.836837 | 7.406049e-57 | -8.615850e-47 |
| Msa0800660 | Msa0944010 | 0.817566 | 3.085210e-52 | -8.615850e-47 |
| Msa0815970 | Msa0944010 | 0.802088 | 6.622353e-49 | -8.615850e-47 |
| Msa0818880 | Msa0944010 | 0.814898 | 1.218292e-51 | -8.615850e-47 |
| Msa0821160 | Msa0944010 | 0.824485 | 7.867753e-54 | -8.615850e-47 |
| Msa0825920 | Msa0944010 | 0.807479 | 4.953944e-50 | -8.615850e-47 |
| Msa0120790 | Msa0944010 | 0.814370 | 1.594843e-51 | -8.615850e-47 |
| Msa0123070 | Msa0944010 | 0.811861 | 5.663420e-51 | -8.615850e-47 |
| Msa0124910 | Msa0944010 | 0.840037 | 1.106960e-57 | -8.615850e-47 |
| Msa0142430 | Msa0944010 | 0.842393 | 2.658182e-58 | -8.615850e-47 |
| Msa0159590 | Msa0944010 | 0.805867 | 1.085103e-49 | -8.615850e-47 |
| Msa0168050 | Msa0944010 | 0.812802 | 3.529284e-51 | -8.615850e-47 |
| Msa0169410 | Msa0944010 | 0.810262 | 1.258227e-50 | -8.615850e-47 |
| Msa0185290 | Msa0944010 | 0.850672 | 1.459360e-60 | -8.615850e-47 |
| Msa0190730 | Msa0944010 | 0.859021 | 5.515479e-63 | -8.615850e-47 |
| Msa0194630 | Msa0944010 | 0.844112 | 9.246122e-59 | -8.615850e-47 |
| Msa0203080 | Msa0944010 | 0.800532 | 1.378774e-48 | -8.615850e-47 |
| Msa0204950 | Msa0944010 | 0.843717 | 1.180103e-58 | -8.615850e-47 |
| Msa0225610 | Msa0944010 | 0.865519 | 5.569389e-65 | -8.615850e-47 |
| Msa0233020 | Msa0944010 | 0.834187 | 3.464802e-56 | -8.615850e-47 |
| Msa0236820 | Msa0944010 | 0.838425 | 2.898467e-57 | -8.615850e-47 |
| Msa0373170 | Msa0944010 | 0.800337 | 1.510905e-48 | -8.615850e-47 |
| Msa0373500 | Msa0944010 | 0.833483 | 5.195441e-56 | -8.615850e-47 |
| Msa0377710 | Msa0944010 | 0.820113 | 8.142955e-53 | -8.615850e-47 |
| Msa0378270 | Msa0944010 | 0.812932 | 3.305466e-51 | -8.615850e-47 |
| Msa0380490 | Msa0944010 | 0.856338 | 3.442437e-62 | -8.615850e-47 |
| Msa0383000 | Msa0944010 | 0.802179 | 6.344407e-49 | -8.615850e-47 |
| Msa0409830 | Msa0944010 | 0.837493 | 5.030631e-57 | -8.615850e-47 |
| Msa0413170 | Msa0944010 | 0.804644 | 1.956949e-49 | -8.615850e-47 |
| Msa0414880 | Msa0944010 | 0.829911 | 3.948394e-55 | -8.615850e-47 |
| Msa0416160 | Msa0944010 | 0.800939 | 1.139089e-48 | -8.615850e-47 |
| Msa0421130 | Msa0944010 | 0.817436 | 3.301563e-52 | -8.615850e-47 |
| Msa0421750 | Msa0944010 | 0.801495 | 8.766014e-49 | -8.615850e-47 |
| Msa0430000 | Msa0944010 | 0.838772 | 2.357987e-57 | -8.615850e-47 |
| Msa0432010 | Msa0944010 | 0.840634 | 7.728494e-58 | -8.615850e-47 |
| Msa0436330 | Msa0944010 | 0.803804 | 2.926821e-49 | -8.615850e-47 |
| Msa0437480 | Msa0944010 | 0.806226 | 9.115137e-50 | -8.615850e-47 |
| Msa0440350 | Msa0944010 | 0.828432 | 9.021497e-55 | -8.615850e-47 |
| Msa0454560 | Msa0944010 | 0.834952 | 2.224982e-56 | -8.615850e-47 |
| Msa0459740 | Msa0944010 | 0.818787 | 1.633494e-52 | -8.615850e-47 |
| Msa0462780 | Msa0944010 | 0.827000 | 1.991998e-54 | -8.615850e-47 |
| Msa0466880 | Msa0944010 | 0.834520 | 2.857603e-56 | -8.615850e-47 |
| Msa0467690 | Msa0944010 | 0.804149 | 2.480897e-49 | -8.615850e-47 |
| Msa0468620 | Msa0944010 | 0.830228 | 3.305132e-55 | -8.615850e-47 |
| Msa0468700 | Msa0944010 | 0.828062 | 1.107445e-54 | -8.615850e-47 |
| Msa0481890 | Msa0944010 | 0.852416 | 4.682756e-61 | -8.615850e-47 |
| Msa0249850 | Msa0944010 | 0.826649 | 2.415608e-54 | -8.615850e-47 |
| Msa0266460 | Msa0944010 | 0.853226 | 2.747949e-61 | -8.615850e-47 |
| Msa0269210 | Msa0944010 | 0.851208 | 1.030737e-60 | -8.615850e-47 |
| Msa0281470 | Msa0944010 | 0.827543 | 1.475891e-54 | -8.615850e-47 |
| Msa0320600 | Msa0944010 | 0.851862 | 6.730917e-61 | -8.615850e-47 |
| Msa0343010 | Msa0944010 | 0.800490 | 1.406213e-48 | -8.615850e-47 |
| Msa0354840 | Msa0944010 | 0.816629 | 5.010650e-52 | -8.615850e-47 |
| Msa0361910 | Msa0944010 | 0.821326 | 4.284920e-53 | -8.615850e-47 |
| Msa0495300 | Msa0944010 | 0.815391 | 9.471884e-52 | -8.615850e-47 |
| Msa0500570 | Msa0944010 | 0.845486 | 3.942572e-59 | -8.615850e-47 |
| Msa0500650 | Msa0944010 | 0.809317 | 2.008508e-50 | -8.615850e-47 |
| Msa0502510 | Msa0944010 | 0.834635 | 2.674014e-56 | -8.615850e-47 |
| Msa0513640 | Msa0944010 | 0.820999 | 5.098493e-53 | -8.615850e-47 |
| Msa0514020 | Msa0944010 | 0.818965 | 1.488304e-52 | -8.615850e-47 |
| Msa0514500 | Msa0944010 | 0.830185 | 3.386022e-55 | -8.615850e-47 |
| Msa0514580 | Msa0944010 | 0.841206 | 5.469231e-58 | -8.615850e-47 |
| Msa0520870 | Msa0944010 | 0.809384 | 1.943165e-50 | -8.615850e-47 |
| Msa0531960 | Msa0944010 | 0.802264 | 6.091600e-49 | -8.615850e-47 |
| Msa0545920 | Msa0944010 | 0.836140 | 1.114144e-56 | -8.615850e-47 |
| Msa0550590 | Msa0944010 | 0.805010 | 1.640430e-49 | -8.615850e-47 |
| Msa0553750 | Msa0944010 | 0.819632 | 1.048985e-52 | -8.615850e-47 |
| Msa0567170 | Msa0944010 | 0.805667 | 1.195082e-49 | -8.615850e-47 |
| Msa0572830 | Msa0944010 | 0.808491 | 3.017364e-50 | -8.615850e-47 |
| Msa0574900 | Msa0944010 | 0.830120 | 3.512383e-55 | -8.615850e-47 |
| Msa0590200 | Msa0944010 | 0.801823 | 7.505510e-49 | -8.615850e-47 |
| Msa0601720 | Msa0944010 | 0.839091 | 1.949979e-57 | -8.615850e-47 |
| Msa0850690 | Msa0944010 | 0.824373 | 8.358786e-54 | -8.615850e-47 |
| Msa0851300 | Msa0944010 | 0.822120 | 2.808281e-53 | -8.615850e-47 |
| Msa0851850 | Msa0944010 | 0.806544 | 7.812090e-50 | -8.615850e-47 |
| Msa0863620 | Msa0944010 | 0.815000 | 1.156384e-51 | -8.615850e-47 |
| Msa0865420 | Msa0944010 | 0.823187 | 1.585721e-53 | -8.615850e-47 |
| Msa0878280 | Msa0944010 | 0.859089 | 5.262870e-63 | -8.615850e-47 |
| Msa0879920 | Msa0944010 | 0.814324 | 1.632381e-51 | -8.615850e-47 |
| Msa0926310 | Msa0944010 | 0.810643 | 1.041043e-50 | -8.615850e-47 |
| Msa0930770 | Msa0944010 | 0.811780 | 5.900071e-51 | -8.615850e-47 |
| Msa0944010 | Msa0980290 | 0.927267 | 1.491837e-91 | -8.615850e-47 |
| Msa0944010 | Msa1000780 | 0.815230 | 1.028335e-51 | -8.615850e-47 |
| Msa0944010 | Msa1002640 | 0.803168 | 3.965125e-49 | -8.615850e-47 |
| Msa0944010 | Msa1019200 | 0.801611 | 8.297137e-49 | -8.615850e-47 |
| Msa0944010 | Msa1031410 | 0.802914 | 4.474720e-49 | -8.615850e-47 |
| Msa0944010 | Msa1042880 | 0.821496 | 3.915651e-53 | -8.615850e-47 |
| Msa0944010 | Msa1044250 | 0.802352 | 5.842393e-49 | -8.615850e-47 |
| Msa0944010 | Msa1074900 | 0.811550 | 6.619980e-51 | -8.615850e-47 |
| Msa0944010 | Msa1078830 | 0.801031 | 1.090895e-48 | -8.615850e-47 |
| Msa0944010 | Msa1084530 | 0.853756 | 1.936483e-61 | -8.615850e-47 |
| Msa0944010 | Msa1104110 | 0.842279 | 2.849319e-58 | -8.615850e-47 |
| Msa0944010 | Msa1106590 | 0.801505 | 8.723233e-49 | -8.615850e-47 |
| Msa0944010 | Msa1114630 | 0.834643 | 2.662350e-56 | -8.615850e-47 |
| Msa0944010 | Msa1125820 | 0.850157 | 2.036552e-60 | -8.615850e-47 |
| Msa0944010 | Msa1125990 | 0.852062 | 5.906629e-61 | -8.615850e-47 |
| Msa0944010 | Msa1132530 | 0.837112 | 6.299298e-57 | -8.615850e-47 |
| Msa0944010 | Msa1147700 | 0.848681 | 5.248866e-60 | -8.615850e-47 |
| Msa0944010 | Msa1147910 | 0.801006 | 1.103778e-48 | -8.615850e-47 |
| Msa0944010 | Msa1159590 | 0.819141 | 1.357088e-52 | -8.615850e-47 |
| Msa0944010 | Msa1169660 | 0.834832 | 2.385680e-56 | -8.615850e-47 |
| Msa0944010 | Msa1171290 | 0.850998 | 1.181714e-60 | -8.615850e-47 |
| Msa0944010 | Msa1190390 | 0.809671 | 1.686450e-50 | -8.615850e-47 |
| Msa0944010 | Msa1192570 | 0.803389 | 3.568745e-49 | -8.615850e-47 |
| Msa0944010 | Msa1201780 | 0.817044 | 4.044508e-52 | -8.615850e-47 |
| Msa0944010 | Msa1211920 | 0.839361 | 1.658877e-57 | -8.615850e-47 |
| Msa0944010 | Msa1215870 | 0.804310 | 2.297140e-49 | -8.615850e-47 |
| Msa0944010 | Msa1216590 | 0.841784 | 3.852495e-58 | -8.615850e-47 |
| Msa0944010 | Msa1218820 | 0.849275 | 3.589155e-60 | -8.615850e-47 |
| Msa0944010 | Msa1254540 | 0.825299 | 5.055294e-54 | -8.615850e-47 |
| Msa0944010 | Msa1262590 | 0.836282 | 1.025032e-56 | -8.615850e-47 |
| Msa0944010 | Msa1262850 | 0.809700 | 1.662176e-50 | -8.615850e-47 |
| Msa0944010 | Msa1263780 | 0.806280 | 8.880879e-50 | -8.615850e-47 |
| Msa0944010 | Msa1300460 | 0.804967 | 1.674872e-49 | -8.615850e-47 |
| Msa0944010 | Msa1306570 | 0.851562 | 8.187589e-61 | -8.615850e-47 |
| Msa0944010 | Msa1332950 | 0.834422 | 3.025565e-56 | -8.615850e-47 |
| Msa0944010 | Msa1362130 | 0.800326 | 1.519226e-48 | -8.615850e-47 |
| Msa0944010 | Msa1364680 | 0.813994 | 1.930461e-51 | -8.615850e-47 |
| Msa0944010 | Msa1365500 | 0.807148 | 5.824225e-50 | -8.615850e-47 |
| Msa0944010 | Msa1366150 | 0.857434 | 1.636711e-62 | -8.615850e-47 |
| Msa0944010 | Msa1368750 | 0.840661 | 7.603666e-58 | -8.615850e-47 |
| Msa0944010 | Msa1374790 | 0.840809 | 6.953659e-58 | -8.615850e-47 |
| Msa0944010 | Msa1375350 | 0.840481 | 8.471091e-58 | -8.615850e-47 |
| Msa0944010 | Msa1384150 | 0.852235 | 5.274510e-61 | -8.615850e-47 |
| Msa0944010 | Msa1387440 | 0.855509 | 6.014852e-62 | -8.615850e-47 |
| Msa0944010 | Msa1391500 | 0.844444 | 7.532412e-59 | -8.615850e-47 |
| Msa0944010 | Msa1393560 | 0.842482 | 2.517818e-58 | -8.615850e-47 |
| Msa0944010 | Msa1397270 | 0.866757 | 2.257599e-65 | -8.615850e-47 |
| Msa0944010 | Msa1398810 | 0.847388 | 1.193585e-59 | -8.615850e-47 |
| Msa0944010 | Msa1399190 | 0.822777 | 1.975776e-53 | -8.615850e-47 |
| Msa0944010 | Msa1405460 | 0.802451 | 5.576519e-49 | -8.615850e-47 |
| Msa0944010 | Msa1407840 | 0.800478 | 1.414412e-48 | -8.615850e-47 |
| Msa0944010 | Msa1426320 | 0.824260 | 8.886706e-54 | -8.615850e-47 |
| Msa0944010 | Msa1429070 | 0.857670 | 1.393732e-62 | -8.615850e-47 |
| Msa0944010 | Msa1437810 | 0.803616 | 3.202232e-49 | -8.615850e-47 |
| Msa0944010 | Msa1446100 | 0.802168 | 6.375496e-49 | -8.615850e-47 |
| Msa0944010 | Msa1451820 | 0.843833 | 1.098564e-58 | -8.615850e-47 |
| Msa0944010 | Msa1459010 | 0.840492 | 8.417874e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944010 | MtrunA17_Chr6g0460791 | 97.522 | 1009 | 25 | 0 | 1 | 1009 | 1 | 1009 | 0.0 | 2029 |
| Msa0944010 | MtrunA17_Chr4g0060191 | 46.330 | 1049 | 491 | 21 | 8 | 1009 | 15 | 1038 | 0.0 | 904 |
| Msa0944010 | MtrunA17_Chr5g0397601 | 43.750 | 1040 | 507 | 21 | 11 | 1009 | 5 | 1007 | 0.0 | 856 |
| Msa0944010 | MtrunA17_Chr6g0461151 | 43.007 | 1051 | 527 | 25 | 6 | 1009 | 1 | 1026 | 0.0 | 831 |
| Msa0944010 | MtrunA17_Chr8g0349231 | 41.834 | 1047 | 513 | 20 | 11 | 1009 | 5 | 1003 | 0.0 | 816 |
| Msa0944010 | MtrunA17_Chr7g0258331 | 51.432 | 768 | 324 | 13 | 271 | 1009 | 28 | 775 | 0.0 | 786 |
| Msa0944010 | MtrunA17_Chr1g0174761 | 51.765 | 765 | 324 | 12 | 271 | 1009 | 29 | 774 | 0.0 | 783 |
| Msa0944010 | MtrunA17_Chr1g0174581 | 48.961 | 770 | 344 | 14 | 271 | 1009 | 46 | 797 | 0.0 | 749 |
| Msa0944010 | MtrunA17_Chr4g0033151 | 49.935 | 769 | 342 | 15 | 263 | 1009 | 23 | 770 | 0.0 | 746 |
| Msa0944010 | MtrunA17_Chr3g0087501 | 46.531 | 836 | 387 | 17 | 213 | 1009 | 8 | 822 | 0.0 | 740 |
| Msa0944010 | MtrunA17_Chr4g0010751 | 48.828 | 768 | 346 | 14 | 271 | 1009 | 445 | 1194 | 0.0 | 739 |
| Msa0944010 | MtrunA17_Chr4g0010751 | 46.512 | 129 | 69 | 0 | 11 | 139 | 2 | 130 | 7.36e-29 | 125 |
| Msa0944010 | MtrunA17_Chr4g0014711 | 48.037 | 764 | 354 | 11 | 271 | 1009 | 299 | 1044 | 0.0 | 720 |
| Msa0944010 | MtrunA17_Chr4g0014711 | 41.085 | 129 | 66 | 4 | 9 | 134 | 1 | 122 | 6.70e-18 | 89.4 |
| Msa0944010 | MtrunA17_Chr7g0247271 | 47.875 | 706 | 317 | 13 | 333 | 1009 | 283 | 966 | 0.0 | 654 |
| Msa0944010 | MtrunA17_Chr7g0247271 | 24.561 | 627 | 328 | 22 | 7 | 537 | 78 | 655 | 1.15e-29 | 127 |
| Msa0944010 | MtrunA17_Chr4g0028371 | 42.308 | 780 | 392 | 14 | 262 | 1009 | 30 | 783 | 0.0 | 608 |
| Msa0944010 | MtrunA17_Chr4g0035961 | 40.769 | 780 | 353 | 15 | 262 | 1009 | 30 | 732 | 0.0 | 587 |
| Msa0944010 | MtrunA17_Chr1g0151051 | 40.625 | 768 | 390 | 16 | 274 | 1003 | 53 | 792 | 4.93e-174 | 528 |
| Msa0944010 | MtrunA17_Chr5g0447321 | 33.903 | 761 | 453 | 15 | 275 | 1009 | 27 | 763 | 2.71e-142 | 444 |
| Msa0944010 | MtrunA17_Chr4g0010641 | 51.538 | 130 | 61 | 1 | 879 | 1008 | 1 | 128 | 2.97e-40 | 144 |
| Msa0944010 | MtrunA17_Chr6g0461171 | 48.951 | 143 | 72 | 1 | 6 | 147 | 1 | 143 | 3.04e-40 | 147 |
| Msa0944010 | MtrunA17_Chr4g0010701 | 41.489 | 94 | 33 | 1 | 892 | 985 | 26 | 97 | 2.81e-16 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944010 | AT3G03680.1 | 69.990 | 1023 | 274 | 14 | 9 | 1009 | 6 | 1017 | 0.0 | 1406 |
| Msa0944010 | AT4G11610.2 | 44.166 | 1037 | 515 | 17 | 6 | 1009 | 2 | 1007 | 0.0 | 875 |
| Msa0944010 | AT4G11610.1 | 43.996 | 1041 | 515 | 17 | 6 | 1009 | 2 | 1011 | 0.0 | 873 |
| Msa0944010 | AT5G48060.1 | 43.715 | 1066 | 498 | 26 | 11 | 1009 | 6 | 1036 | 0.0 | 835 |
| Msa0944010 | AT5G17980.1 | 42.410 | 1087 | 505 | 29 | 6 | 1009 | 1 | 1049 | 0.0 | 835 |
| Msa0944010 | AT1G04150.1 | 44.004 | 1034 | 511 | 22 | 11 | 1009 | 12 | 1012 | 0.0 | 823 |
| Msa0944010 | AT1G22610.1 | 41.698 | 1048 | 545 | 16 | 9 | 1009 | 1 | 1029 | 0.0 | 805 |
| Msa0944010 | AT3G57880.4 | 51.111 | 765 | 328 | 13 | 271 | 1009 | 29 | 773 | 0.0 | 778 |
| Msa0944010 | AT3G57880.2 | 51.111 | 765 | 328 | 13 | 271 | 1009 | 29 | 773 | 0.0 | 778 |
| Msa0944010 | AT3G57880.3 | 51.111 | 765 | 328 | 13 | 271 | 1009 | 29 | 773 | 0.0 | 778 |
| Msa0944010 | AT3G57880.1 | 51.111 | 765 | 328 | 13 | 271 | 1009 | 29 | 773 | 0.0 | 778 |
| Msa0944010 | AT5G12970.1 | 50.725 | 759 | 335 | 12 | 271 | 1009 | 30 | 769 | 0.0 | 776 |
| Msa0944010 | AT1G74720.1 | 51.421 | 774 | 318 | 14 | 274 | 1009 | 328 | 1081 | 0.0 | 771 |
| Msa0944010 | AT1G51570.1 | 49.283 | 767 | 342 | 13 | 271 | 1009 | 29 | 776 | 0.0 | 759 |
| Msa0944010 | AT4G11610.3 | 44.722 | 881 | 432 | 15 | 154 | 1009 | 24 | 874 | 0.0 | 753 |
| Msa0944010 | AT4G00700.1 | 40.346 | 1041 | 540 | 21 | 11 | 1009 | 5 | 1006 | 0.0 | 740 |
| Msa0944010 | AT4G00700.2 | 40.346 | 1041 | 540 | 21 | 11 | 1009 | 5 | 1006 | 0.0 | 740 |
| Msa0944010 | AT5G06850.1 | 48.249 | 771 | 347 | 14 | 271 | 1009 | 44 | 794 | 0.0 | 731 |
| Msa0944010 | AT3G61300.1 | 39.539 | 1042 | 522 | 26 | 6 | 1009 | 1 | 972 | 0.0 | 710 |
| Msa0944010 | AT4G20080.1 | 46.316 | 760 | 366 | 13 | 271 | 1009 | 36 | 774 | 0.0 | 672 |
| Msa0944010 | AT3G61720.1 | 33.501 | 797 | 434 | 22 | 271 | 1006 | 31 | 792 | 2.99e-126 | 403 |
| Msa0944010 | AT5G03435.1 | 35.163 | 765 | 410 | 26 | 271 | 1003 | 30 | 740 | 5.04e-124 | 395 |
| Msa0944010 | AT5G03435.2 | 35.866 | 566 | 297 | 18 | 271 | 809 | 30 | 556 | 4.28e-96 | 315 |
| Msa0944010 | AT5G44760.1 | 38.918 | 388 | 186 | 12 | 262 | 640 | 19 | 364 | 1.54e-68 | 238 |
Find 239 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCTGTGCCGTTTAA+AGG | 0.159382 | 6_3:+20372666 | Msa0944010:CDS |
| CAGCTGGGATTGGGTGGTTT+GGG | 0.202911 | 6_3:+20370736 | Msa0944010:CDS |
| TCTGCTGGAGTTTCTTCTTT+TGG | 0.208232 | 6_3:-20369968 | None:intergenic |
| GTCCTGGTTCGAACCCATTT+TGG | 0.213368 | 6_3:-20371685 | None:intergenic |
| AGCTCGGTCTGAACCGGCTT+TGG | 0.243409 | 6_3:+20372101 | Msa0944010:CDS |
| GATTGGAAGCTTTGTTTAGT+TGG | 0.245110 | 6_3:+20372586 | Msa0944010:CDS |
| CATATTCGTGCTTGTTTAGA+AGG | 0.246593 | 6_3:+20371475 | Msa0944010:CDS |
| GTTTAAAGGGTTTGTGCTTT+TGG | 0.255765 | 6_3:+20372680 | Msa0944010:CDS |
| ACAGCTGGGATTGGGTGGTT+TGG | 0.268650 | 6_3:+20370735 | Msa0944010:CDS |
| TCACCGGCTGGTTCGGTTAC+CGG | 0.279086 | 6_3:-20369905 | None:intergenic |
| TGTTCCACGTGTCCCATCTT+TGG | 0.298005 | 6_3:-20371632 | None:intergenic |
| TCCGGTGCAGGCGGAGTTGC+CGG | 0.314788 | 6_3:-20370028 | None:intergenic |
| TAATATGATTTGAGCTACTT+TGG | 0.314910 | 6_3:+20372928 | Msa0944010:three_prime_UTR |
| TAATGCATTCTTGGTAGAAT+TGG | 0.316598 | 6_3:-20372006 | None:intergenic |
| TCCGACTTGGAATGAAGATT+TGG | 0.321241 | 6_3:+20370858 | Msa0944010:CDS |
| GATAGGGTGCGTGCTCTTGC+GGG | 0.324280 | 6_3:+20372519 | Msa0944010:CDS |
| GGTTTAACGTAATGCATTCT+TGG | 0.333224 | 6_3:-20372015 | None:intergenic |
| GCGAATTGGTTTAGATTAGT+TGG | 0.335655 | 6_3:+20372189 | Msa0944010:CDS |
| GTTTCAAATTCAAGATCAAT+TGG | 0.341775 | 6_3:+20370934 | Msa0944010:CDS |
| GTGGTCTGAATGTGTATAAA+AGG | 0.343755 | 6_3:+20372992 | Msa0944010:three_prime_UTR |
| GCTCGGTCTGAACCGGCTTT+GGG | 0.345208 | 6_3:+20372102 | Msa0944010:CDS |
| GCTTATGTGGTGGCGAAATA+TGG | 0.356278 | 6_3:+20371661 | Msa0944010:CDS |
| AGTAGTTTAATTAGTACTTA+AGG | 0.358100 | 6_3:+20372842 | Msa0944010:three_prime_UTR |
| TCTATATGTTCGCGTTGTTA+AGG | 0.359422 | 6_3:+20370222 | Msa0944010:CDS |
| TGGCGAAATATGGTCCAAAA+TGG | 0.360595 | 6_3:+20371671 | Msa0944010:CDS |
| CTCACTATCACCGGCTGATT+CGG | 0.367845 | 6_3:-20369864 | None:intergenic |
| TCACCGGCTGATTCGGTTAC+CGG | 0.369695 | 6_3:-20369857 | None:intergenic |
| GTGAAAATGAAGGTAAAGAT+TGG | 0.376505 | 6_3:+20370326 | Msa0944010:CDS |
| TGAACTAAAACCGTTGTTGC+CGG | 0.377060 | 6_3:-20372273 | None:intergenic |
| AGGGTCTGAATGTGTATAAA+AGG | 0.377898 | 6_3:+20373012 | Msa0944010:three_prime_UTR |
| CTTCTCATCACCGGCTGGTT+CGG | 0.384295 | 6_3:-20369912 | None:intergenic |
| GAGTCGTGGCAGTCGGATTC+CGG | 0.386228 | 6_3:+20370625 | Msa0944010:CDS |
| TTAGGAAAAGTTAAAATCTC+TGG | 0.386303 | 6_3:+20369656 | Msa0944010:CDS |
| ATCCTCGGATCCATGTTCTT+TGG | 0.388714 | 6_3:-20372402 | None:intergenic |
| GATGCTGAAAATGAGGAAAA+AGG | 0.390152 | 6_3:+20372957 | Msa0944010:three_prime_UTR |
| AATATGATTTGAGCTACTTT+GGG | 0.390454 | 6_3:+20372929 | Msa0944010:three_prime_UTR |
| CCAATTGGTTTACTTGAAGT+TGG | 0.392682 | 6_3:+20371574 | Msa0944010:CDS |
| CTCTTCTTTCTTGTCCTCAC+CGG | 0.396369 | 6_3:-20369816 | None:intergenic |
| TCTATGCTGTGCCGTTTAAA+GGG | 0.398920 | 6_3:+20372667 | Msa0944010:CDS |
| CAATTGGTTTACTTGAAGTT+GGG | 0.401660 | 6_3:+20371575 | Msa0944010:CDS |
| CCAGGATTTACAGCTGGGAT+TGG | 0.402611 | 6_3:+20370726 | Msa0944010:CDS |
| CTGTCCGGTGGAACTCTCTT+CGG | 0.403287 | 6_3:-20370499 | None:intergenic |
| GATTGGCGACGTTGCAGCCC+AGG | 0.404597 | 6_3:+20372557 | Msa0944010:CDS |
| TCGAGATGGTTTAATCTTTG+TGG | 0.407465 | 6_3:+20371018 | Msa0944010:CDS |
| CCAATCCCAGCTGTAAATCC+TGG | 0.408557 | 6_3:-20370726 | None:intergenic |
| CTGTGGAAGTGGTTCGAATC+AGG | 0.410881 | 6_3:+20372493 | Msa0944010:CDS |
| CTTGTCCTCACCGGCTGAAT+CGG | 0.411989 | 6_3:-20369807 | None:intergenic |
| GATCGACGCCACATGGATCT+TGG | 0.412586 | 6_3:-20370962 | None:intergenic |
| TTTACTATCCGTTAGAGAAA+AGG | 0.414602 | 6_3:+20369714 | Msa0944010:CDS |
| ATGACGTTATGATTGCAGTA+TGG | 0.419939 | 6_3:+20370572 | Msa0944010:CDS |
| GTATACCATTGCGGTGCTAA+TGG | 0.421746 | 6_3:-20370523 | None:intergenic |
| TGCAGCCCAGGGTGAGAGAT+TGG | 0.421788 | 6_3:+20372569 | Msa0944010:CDS |
| CCAGCTGTAAATCCTGGGTT+TGG | 0.421812 | 6_3:-20370720 | None:intergenic |
| GGGAGGGCACAAAGTTTGAT+TGG | 0.422832 | 6_3:+20372540 | Msa0944010:CDS |
| GATGTTTGCGATATTCTGTT+TGG | 0.424069 | 6_3:+20372629 | Msa0944010:CDS |
| GAGTCCTGAACTTTATGTTA+AGG | 0.424579 | 6_3:+20370777 | Msa0944010:CDS |
| TGAGGAAAAGTAAAGCGAAT+TGG | 0.426414 | 6_3:+20372175 | Msa0944010:CDS |
| GGTGCGTGCTCTTGCGGGGA+GGG | 0.427713 | 6_3:+20372524 | Msa0944010:CDS |
| TAAACTTTCGCTCGTGTCTC+CGG | 0.428687 | 6_3:-20370658 | None:intergenic |
| TCACCGGCTGAATCGGTAAC+AGG | 0.430590 | 6_3:-20369800 | None:intergenic |
| AATTCGCACGTGGGTGAATC+CGG | 0.433417 | 6_3:+20372254 | Msa0944010:CDS |
| CTACGTGGACATGGTAAGTT+TGG | 0.434355 | 6_3:+20372428 | Msa0944010:CDS |
| CTCAAAACATCTTGCTGACC+CGG | 0.437003 | 6_3:-20372045 | None:intergenic |
| ATTGATGAATTATTTGATTG+AGG | 0.438601 | 6_3:-20369356 | None:intergenic |
| AGTTCAGGACTCCGAACCTT+AGG | 0.439184 | 6_3:-20370766 | None:intergenic |
| GGTTCAGTTCATGCTTGATT+CGG | 0.439464 | 6_3:+20372134 | Msa0944010:CDS |
| GCAATCATAACGTCATTTCC+TGG | 0.441004 | 6_3:-20370565 | None:intergenic |
| TCGTTTAGCTCGGTCTGAAC+CGG | 0.441535 | 6_3:+20372095 | Msa0944010:CDS |
| ACATCCTTCGTTTCAGCTAC+CGG | 0.443201 | 6_3:-20370064 | None:intergenic |
| ACTTCCACAGACCTCATTGT+TGG | 0.444809 | 6_3:-20372480 | None:intergenic |
| ACTGTTGGTAGAATTAAATA+AGG | 0.446566 | 6_3:-20372324 | None:intergenic |
| GTCAATGACCTCTGAGACGA+TGG | 0.447157 | 6_3:+20369583 | Msa0944010:CDS |
| CGATAGGGTGCGTGCTCTTG+CGG | 0.447912 | 6_3:+20372518 | Msa0944010:CDS |
| CAAGAGATTTGAATCCTCAA+TGG | 0.452098 | 6_3:+20369525 | Msa0944010:CDS |
| GAACTTGATGAAGAGTTTGA+TGG | 0.452182 | 6_3:+20372453 | Msa0944010:CDS |
| TTTCAAATTCAAGATCAATT+GGG | 0.452813 | 6_3:+20370935 | Msa0944010:CDS |
| TGGAGCAACGAATCTTCTTC+CGG | 0.452951 | 6_3:+20371603 | Msa0944010:CDS |
| TTATGATTGCAGTATGGATT+GGG | 0.454958 | 6_3:+20370578 | Msa0944010:CDS |
| AACAATGAGGTCTGTGGAAG+TGG | 0.457588 | 6_3:+20372482 | Msa0944010:CDS |
| CTTCCGGTGAAAACCAAAGA+TGG | 0.459935 | 6_3:+20371619 | Msa0944010:CDS |
| TGAGCCTTAACATAAAGTTC+AGG | 0.461491 | 6_3:-20370781 | None:intergenic |
| TAAGGCTCAGCTTGGTGCAC+AGG | 0.461853 | 6_3:+20370795 | Msa0944010:CDS |
| TGAGGTTTAGGAACAGAATG+AGG | 0.463797 | 6_3:+20372376 | Msa0944010:CDS |
| TTCATGGCTGAGTTTAATGC+AGG | 0.464148 | 6_3:+20371972 | Msa0944010:CDS |
| TTACTTGAAGTTGGGATTCG+TGG | 0.464302 | 6_3:+20371583 | Msa0944010:CDS |
| GATGCTAGAGATGTCAGAAT+GGG | 0.466489 | 6_3:+20371817 | Msa0944010:CDS |
| CTTCTTTAGAAGTTTCCGTT+TGG | 0.466514 | 6_3:+20370389 | Msa0944010:CDS |
| TGAAAATGAAGGTAAAGATT+GGG | 0.466816 | 6_3:+20370327 | Msa0944010:CDS |
| ACAACGCGAACATATAGAAA+TGG | 0.467257 | 6_3:-20370217 | None:intergenic |
| CATTCCATCTCGGGTTAAAC+CGG | 0.467359 | 6_3:-20371717 | None:intergenic |
| CAGGATTTACAGCTGGGATT+GGG | 0.467893 | 6_3:+20370727 | Msa0944010:CDS |
| GTGTATTGCTCATTCCATCT+CGG | 0.471544 | 6_3:-20371727 | None:intergenic |
| TGTATTGCTCATTCCATCTC+GGG | 0.473085 | 6_3:-20371726 | None:intergenic |
| GCTGTTCCTTGACCGTCTTT+CGG | 0.475271 | 6_3:-20369446 | None:intergenic |
| CCAAACCCAGGATTTACAGC+TGG | 0.475406 | 6_3:+20370720 | Msa0944010:CDS |
| TCTCAGATTAAAGGTGAACT+TGG | 0.475536 | 6_3:+20369746 | Msa0944010:CDS |
| CCAACTTCAAGTAAACCAAT+TGG | 0.475732 | 6_3:-20371574 | None:intergenic |
| CTGAGGCATCCGAGGTTTCG+TGG | 0.481796 | 6_3:+20372717 | Msa0944010:CDS |
| ATTCTGTTTGGTAATGTCGT+TGG | 0.483815 | 6_3:+20372641 | Msa0944010:CDS |
| TGGTTTGGGCTCCGAACCTA+AGG | 0.485892 | 6_3:+20370750 | Msa0944010:CDS |
| TGAAGGTAAAGATTGGGATC+AGG | 0.487382 | 6_3:+20370333 | Msa0944010:CDS |
| AAAAGCACAAACCCTTTAAA+CGG | 0.491505 | 6_3:-20372678 | None:intergenic |
| ATGCATTACGTTAAACCATT+CGG | 0.491777 | 6_3:+20372021 | Msa0944010:CDS |
| ACCGGCAACTCCGCCTGCAC+CGG | 0.495123 | 6_3:+20370027 | Msa0944010:CDS |
| GCCAGGTGGTGCGAGGAGAA+TGG | 0.497164 | 6_3:+20371915 | Msa0944010:CDS |
| GATTTACAGCTGGGATTGGG+TGG | 0.500175 | 6_3:+20370730 | Msa0944010:CDS |
| GGCGAAATATGGTCCAAAAT+GGG | 0.500863 | 6_3:+20371672 | Msa0944010:CDS |
| AGAAGAAAATACAAAAGAAG+AGG | 0.501047 | 6_3:+20369940 | Msa0944010:CDS |
| TGGGCTCCGAACCTAAGGTT+CGG | 0.502057 | 6_3:+20370755 | Msa0944010:CDS |
| CCCATTCTCCTCGCACCACC+TGG | 0.502706 | 6_3:-20371916 | None:intergenic |
| CGACGGAAGTAGTTTCTGTA+AGG | 0.503747 | 6_3:+20369384 | Msa0944010:CDS |
| ATAACTAGAAACGGTTCAAA+CGG | 0.505478 | 6_3:-20370898 | None:intergenic |
| AGCTTCCAATCTCTCACCCT+GGG | 0.505653 | 6_3:-20372574 | None:intergenic |
| AAGAGATTTGAATCCTCAAT+GGG | 0.506511 | 6_3:+20369526 | Msa0944010:CDS |
| TGCGGTGCTAATGGACTGTC+CGG | 0.507866 | 6_3:-20370514 | None:intergenic |
| CAGTTAACGAAGCCTCCAAT+TGG | 0.508014 | 6_3:+20371559 | Msa0944010:CDS |
| GGATTAACAACCTCCGGTGC+AGG | 0.508272 | 6_3:-20370040 | None:intergenic |
| TCTAATGTAATAACTAGAAA+CGG | 0.512939 | 6_3:-20370907 | None:intergenic |
| ACCGGTGGATTAACAACCTC+CGG | 0.513220 | 6_3:-20370046 | None:intergenic |
| GGCAACTCCGCCTGCACCGG+AGG | 0.518749 | 6_3:+20370030 | Msa0944010:CDS |
| AAATCCACCGGCGAATCCAC+CGG | 0.518908 | 6_3:+20370009 | Msa0944010:CDS |
| AGCAGAGAAAACTCCGTCAC+CGG | 0.518918 | 6_3:+20369985 | Msa0944010:CDS |
| AGGACTCCGAACCTTAGGTT+CGG | 0.519500 | 6_3:-20370761 | None:intergenic |
| GAGGAAAATCTTTCTTACAC+AGG | 0.520301 | 6_3:+20371045 | Msa0944010:CDS |
| AGTCTCAAATACCACAGCTT+GGG | 0.521141 | 6_3:-20370688 | None:intergenic |
| GTCCAAAATGGGTTCGAACC+AGG | 0.527862 | 6_3:+20371683 | Msa0944010:CDS |
| TAAAAGGTTACCGTTGATTG+TGG | 0.528483 | 6_3:+20373028 | Msa0944010:three_prime_UTR |
| CCAGGTGGTGCGAGGAGAAT+GGG | 0.529733 | 6_3:+20371916 | Msa0944010:CDS |
| TGATTCTGATTCTAACCAAA+CGG | 0.529918 | 6_3:-20370404 | None:intergenic |
| GGAGTTGCCGGTGGATTCGC+CGG | 0.530330 | 6_3:-20370016 | None:intergenic |
| GGATTCCGGTGGTTTGATAC+CGG | 0.531419 | 6_3:+20370639 | Msa0944010:CDS |
| GTTATGATTGCAGTATGGAT+TGG | 0.533211 | 6_3:+20370577 | Msa0944010:CDS |
| ATTGGCGACGTTGCAGCCCA+GGG | 0.533947 | 6_3:+20372558 | Msa0944010:CDS |
| TCTCAGAGGTCATTGACTCT+TGG | 0.535745 | 6_3:-20369577 | None:intergenic |
| AAACAAAGAGAAACAAATAA+CGG | 0.536178 | 6_3:+20370435 | Msa0944010:CDS |
| TCCACCGGTAGCTGAAACGA+AGG | 0.537813 | 6_3:+20370060 | Msa0944010:CDS |
| TTACGTTAAACCATTCGGCC+CGG | 0.538338 | 6_3:+20372026 | Msa0944010:CDS |
| AGATGCTAGAGATGTCAGAA+TGG | 0.539326 | 6_3:+20371816 | Msa0944010:CDS |
| ACTTCAAGTAAACCAATTGG+AGG | 0.542639 | 6_3:-20371571 | None:intergenic |
| ACCGGCTTTGGGTTCAGAAG+TGG | 0.542962 | 6_3:+20372113 | Msa0944010:CDS |
| TGGTTCGAATCAGGTACGAT+AGG | 0.544765 | 6_3:+20372502 | Msa0944010:CDS |
| GGGTGCGTGCTCTTGCGGGG+AGG | 0.546936 | 6_3:+20372523 | Msa0944010:CDS |
| TACGTTAAACCATTCGGCCC+GGG | 0.548307 | 6_3:+20372027 | Msa0944010:CDS |
| CTTTATGTTAAGGCTCAGCT+TGG | 0.551843 | 6_3:+20370787 | Msa0944010:CDS |
| TAGTAACGGCTCGTTTAGCT+CGG | 0.551888 | 6_3:+20372085 | Msa0944010:CDS |
| ATTCGTGCTTGTTTAGAAGG+TGG | 0.552112 | 6_3:+20371478 | Msa0944010:CDS |
| CCAATTGTTAAAACTGTGCA+AGG | 0.552185 | 6_3:-20371766 | None:intergenic |
| TTAACTGCTTCGCAGAAGCA+CGG | 0.552505 | 6_3:-20371543 | None:intergenic |
| ACCACTTCTGAACCCAAAGC+CGG | 0.553210 | 6_3:-20372114 | None:intergenic |
| TCTTGCTGACCCGGGCCGAA+TGG | 0.553912 | 6_3:-20372036 | None:intergenic |
| GTTTAATCTTTGTGGTTCAG+AGG | 0.554034 | 6_3:+20371026 | Msa0944010:CDS |
| CTTGAATCGGAAAATTCACC+AGG | 0.554538 | 6_3:+20370547 | Msa0944010:CDS |
| CAAACCCAGGATTTACAGCT+GGG | 0.554548 | 6_3:+20370721 | Msa0944010:CDS |
| TCCGCTCGATCGACGCCACA+TGG | 0.555828 | 6_3:-20370969 | None:intergenic |
| TGGAACAACTGATGCTTATG+TGG | 0.556975 | 6_3:+20371648 | Msa0944010:CDS |
| TCGAGTTTCTCGTCCCATTG+AGG | 0.558223 | 6_3:-20369539 | None:intergenic |
| GAAAGCTGAAGAGAAGTCAC+CGG | 0.558569 | 6_3:+20369838 | Msa0944010:CDS |
| CGACTCCTGAAAAGCTTCAT+CGG | 0.561784 | 6_3:-20370608 | None:intergenic |
| AAACCGGTCTACAATAGTCC+TGG | 0.564414 | 6_3:-20371701 | None:intergenic |
| TGGTCTGAATGTGTATAAAA+GGG | 0.568281 | 6_3:+20372993 | Msa0944010:three_prime_UTR |
| TCAACTCGGCTAATCCGACT+TGG | 0.569244 | 6_3:+20370845 | Msa0944010:CDS |
| CTATTTCAGTCCACAATCAA+CGG | 0.570423 | 6_3:-20373038 | None:intergenic |
| GGAAAATGATGCTGAAAATG+AGG | 0.573613 | 6_3:+20372950 | Msa0944010:three_prime_UTR |
| GCAATGGTATACGCTTGAAT+CGG | 0.574115 | 6_3:+20370534 | Msa0944010:CDS |
| AATGAGGGTGCCAAAGAACA+TGG | 0.574433 | 6_3:+20372392 | Msa0944010:CDS |
| CAATCCCAGCTGTAAATCCT+GGG | 0.574590 | 6_3:-20370725 | None:intergenic |
| TTCCGGTGAAAACCAAAGAT+GGG | 0.579067 | 6_3:+20371620 | Msa0944010:CDS |
| TAGTCTCAAATACCACAGCT+TGG | 0.579911 | 6_3:-20370689 | None:intergenic |
| TAGACCGGTTTAACCCGAGA+TGG | 0.580601 | 6_3:+20371713 | Msa0944010:CDS |
| GTGGGTGAATCCGGCAACAA+CGG | 0.581645 | 6_3:+20372263 | Msa0944010:CDS |
| GAACCAGGACTATTGTAGAC+CGG | 0.581999 | 6_3:+20371698 | Msa0944010:CDS |
| TTTATTATCTGAGGCATCCG+AGG | 0.583279 | 6_3:+20372709 | Msa0944010:CDS |
| AAGCTTCCAATCTCTCACCC+TGG | 0.584206 | 6_3:-20372575 | None:intergenic |
| ACCGGAGGTTGTTAATCCAC+CGG | 0.584801 | 6_3:+20370045 | Msa0944010:CDS |
| GGTTAGATGGAATTCGCACG+TGG | 0.584819 | 6_3:+20372244 | Msa0944010:CDS |
| TTACCTGTTACCGATTCAGC+CGG | 0.585131 | 6_3:+20369797 | Msa0944010:CDS |
| GGTTCGAATCAGGTACGATA+GGG | 0.586450 | 6_3:+20372503 | Msa0944010:CDS |
| TCAAAACATCTTGCTGACCC+GGG | 0.588752 | 6_3:-20372044 | None:intergenic |
| GAGGATGTCCTACGTGGACA+TGG | 0.588871 | 6_3:+20372419 | Msa0944010:CDS |
| TACGCGATCGTTGATTTCGA+CGG | 0.589131 | 6_3:+20369476 | Msa0944010:CDS |
| ACCAAATCTTCATTCCAAGT+CGG | 0.591542 | 6_3:-20370859 | None:intergenic |
| CAAATAACGGAGATTTCACT+CGG | 0.591708 | 6_3:+20370448 | Msa0944010:CDS |
| TTTATCTTTCTCCCAAGCTG+TGG | 0.592083 | 6_3:+20370677 | Msa0944010:CDS |
| GAGGTTTAGGAACAGAATGA+GGG | 0.595506 | 6_3:+20372377 | Msa0944010:CDS |
| AGAACAAAGAGTGAAAATGA+AGG | 0.597593 | 6_3:+20370316 | Msa0944010:CDS |
| GCAAACATCGCTGTAGCACG+TGG | 0.600043 | 6_3:-20372615 | None:intergenic |
| AGTTTAATTAGTACTTAAGG+TGG | 0.604988 | 6_3:+20372845 | Msa0944010:three_prime_UTR |
| GTTGCCGGTGGATTCGCCGG+TGG | 0.605637 | 6_3:-20370013 | None:intergenic |
| CCGGCTGGTTCGGTTACCGG+TGG | 0.605674 | 6_3:-20369902 | None:intergenic |
| AACGGAGATTTCACTCGGAA+CGG | 0.606889 | 6_3:+20370453 | Msa0944010:CDS |
| TGGTTTGAAAATTTCTTACG+TGG | 0.608351 | 6_3:+20369766 | Msa0944010:CDS |
| GGCATGTCACCACGAAACCT+CGG | 0.609287 | 6_3:-20372726 | None:intergenic |
| GGACGGATGTGAAATCGAGA+TGG | 0.611002 | 6_3:+20371004 | Msa0944010:CDS |
| TCCATGTGGCGTCGATCGAG+CGG | 0.612870 | 6_3:+20370968 | Msa0944010:CDS |
| GGTGCAGGCGGAGTTGCCGG+TGG | 0.618271 | 6_3:-20370025 | None:intergenic |
| TCCTTCGTTTCAGCTACCGG+TGG | 0.618506 | 6_3:-20370061 | None:intergenic |
| TGTCTCCGGTATCAAACCAC+CGG | 0.619470 | 6_3:-20370644 | None:intergenic |
| TCCGTCACCGGAAAATCCAC+CGG | 0.619482 | 6_3:+20369997 | Msa0944010:CDS |
| ATGTCCACGTAGGACATCCT+CGG | 0.620138 | 6_3:-20372417 | None:intergenic |
| AGTTCCGAAGAGAGTTCCAC+CGG | 0.622795 | 6_3:+20370495 | Msa0944010:CDS |
| ACAGTCCATTAGCACCGCAA+TGG | 0.623414 | 6_3:+20370518 | Msa0944010:CDS |
| AGGTCATTGACTCTTGGTCA+AGG | 0.623725 | 6_3:-20369571 | None:intergenic |
| ATACTCATGTGTGGAGCATG+AGG | 0.623826 | 6_3:+20372157 | Msa0944010:CDS |
| TCGGATTGGTTTAGTCAACT+CGG | 0.627132 | 6_3:+20370831 | Msa0944010:CDS |
| CAGAGATCGAAGCAGAAGCG+CGG | 0.627407 | 6_3:+20370171 | Msa0944010:CDS |
| AAGAATCTAATGCCGAAAGA+CGG | 0.630498 | 6_3:+20369434 | Msa0944010:CDS |
| GTTGACTAAACCAATCCGAC+CGG | 0.631922 | 6_3:-20370827 | None:intergenic |
| TCGAGCGGAGATTAGACGAT+CGG | 0.632807 | 6_3:+20370983 | Msa0944010:CDS |
| TTAACAACCTCCGGTGCAGG+CGG | 0.633051 | 6_3:-20370037 | None:intergenic |
| CCACCGGTAACCGAACCAGC+CGG | 0.634474 | 6_3:+20369902 | Msa0944010:CDS |
| GGAAGCACGTTTGTGAAAAG+CGG | 0.639955 | 6_3:+20369677 | Msa0944010:CDS |
| TGCCAAAGAACATGGATCCG+AGG | 0.642801 | 6_3:+20372400 | Msa0944010:CDS |
| ATTGATCTCCATCGTCTCAG+AGG | 0.644785 | 6_3:-20369591 | None:intergenic |
| AACTGCTATGAAGATAGTAA+CGG | 0.650640 | 6_3:+20372071 | Msa0944010:CDS |
| AAGAAGTTCACGAAAACAGA+CGG | 0.651665 | 6_3:-20372747 | None:intergenic |
| GCGGAGATTAGACGATCGGA+CGG | 0.651770 | 6_3:+20370987 | Msa0944010:CDS |
| TCACCGGTAACCGAATCAGC+CGG | 0.654339 | 6_3:+20369854 | Msa0944010:CDS |
| GCTGTGGTATTTGAGACTAA+CGG | 0.660341 | 6_3:+20370693 | Msa0944010:CDS |
| AAAACCAAAGATGGGACACG+TGG | 0.664933 | 6_3:+20371628 | Msa0944010:CDS |
| TAGAGAGAACAGAACAGCAA+CGG | 0.670111 | 6_3:-20369298 | None:intergenic |
| TGTTACCGATTCAGCCGGTG+AGG | 0.673196 | 6_3:+20369802 | Msa0944010:CDS |
| GAATGGGGAAAATTCGTGTG+CGG | 0.674459 | 6_3:+20371833 | Msa0944010:CDS |
| ATGCTAGAGATGTCAGAATG+GGG | 0.678013 | 6_3:+20371818 | Msa0944010:CDS |
| TAATTCATCAATGACTACGA+CGG | 0.684352 | 6_3:+20369367 | Msa0944010:exon |
| CTAATGCCGAAAGACGGTCA+AGG | 0.685567 | 6_3:+20369440 | Msa0944010:CDS |
| GTTAGATGGAATTCGCACGT+GGG | 0.694324 | 6_3:+20372245 | Msa0944010:CDS |
| ATAATCTGATCAGAAAACGA+CGG | 0.708907 | 6_3:-20372780 | None:intergenic |
| GATTCAAGCGTATACCATTG+CGG | 0.708958 | 6_3:-20370532 | None:intergenic |
| TATGAAATTGTTCAGAAACG+AGG | 0.709736 | 6_3:+20370106 | Msa0944010:CDS |
| ATGGAATGAGCAATACACAT+GGG | 0.710143 | 6_3:+20371732 | Msa0944010:CDS |
| GGTGCTAATGGACTGTCCGG+TGG | 0.719319 | 6_3:-20370511 | None:intergenic |
| ACTAACGGTTATCCAAACCC+AGG | 0.721683 | 6_3:+20370708 | Msa0944010:CDS |
| AATAAGAATTAACGTAGACA+CGG | 0.721964 | 6_3:-20371876 | None:intergenic |
| GATGGAATGAGCAATACACA+TGG | 0.725517 | 6_3:+20371731 | Msa0944010:CDS |
| GGATCCGAGGATGTCCTACG+TGG | 0.726968 | 6_3:+20372413 | Msa0944010:CDS |
| AACAACTGATGCTTATGTGG+TGG | 0.739510 | 6_3:+20371651 | Msa0944010:CDS |
| TGGGAAAACCAAGATCCATG+TGG | 0.746333 | 6_3:+20370954 | Msa0944010:CDS |
| CAAACTTACCATGTCCACGT+AGG | 0.751076 | 6_3:-20372427 | None:intergenic |
| TTGATTCGGATACTCATGTG+TGG | 0.755979 | 6_3:+20372148 | Msa0944010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAATAGTATTTTTTGA+AGG | - | chr6_3:20371208-20371227 | None:intergenic | 10.0% |
| !! | TTCAAAAAATACTATTAATT+AGG | + | chr6_3:20371207-20371226 | Msa0944010:intron | 10.0% |
| !! | AGTAAAATATGCAATATATT+TGG | - | chr6_3:20371088-20371107 | None:intergenic | 15.0% |
| !! | ATTGATGAATTATTTGATTG+AGG | - | chr6_3:20369359-20369378 | None:intergenic | 20.0% |
| !! | AAACAAAGAGAAACAAATAA+CGG | + | chr6_3:20370435-20370454 | Msa0944010:CDS | 20.0% |
| !! | TCTAATGTAATAACTAGAAA+CGG | - | chr6_3:20370910-20370929 | None:intergenic | 20.0% |
| !! | TTTCAAATTCAAGATCAATT+GGG | + | chr6_3:20370935-20370954 | Msa0944010:CDS | 20.0% |
| !!! | TATATTGCATATTTTACTGT+TGG | + | chr6_3:20371090-20371109 | Msa0944010:intron | 20.0% |
| !! | CATATATAAAATGAACACAT+TGG | - | chr6_3:20371124-20371143 | None:intergenic | 20.0% |
| !! | AGTAGTTTAATTAGTACTTA+AGG | + | chr6_3:20372842-20372861 | Msa0944010:three_prime_UTR | 20.0% |
| !!! | GTGTTTTTATTAATGAGAAG+AGG | - | chr6_3:20369330-20369349 | None:intergenic | 25.0% |
| ! | TTAGGAAAAGTTAAAATCTC+TGG | + | chr6_3:20369656-20369675 | Msa0944010:CDS | 25.0% |
| ! | AGAAGAAAATACAAAAGAAG+AGG | + | chr6_3:20369940-20369959 | Msa0944010:CDS | 25.0% |
| ! | TGAAAATGAAGGTAAAGATT+GGG | + | chr6_3:20370327-20370346 | Msa0944010:CDS | 25.0% |
| !!! | GTTTTTGCTTTTGATAAAGA+AGG | + | chr6_3:20370355-20370374 | Msa0944010:CDS | 25.0% |
| ! | GTTTCAAATTCAAGATCAAT+TGG | + | chr6_3:20370934-20370953 | Msa0944010:CDS | 25.0% |
| ! | AATGAGCTTATATTTAGAGA+CGG | + | chr6_3:20371274-20371293 | Msa0944010:intron | 25.0% |
| ! | AATCCAAAATGTCAATTAGT+GGG | - | chr6_3:20371434-20371453 | None:intergenic | 25.0% |
| ! | AAATCCAAAATGTCAATTAG+TGG | - | chr6_3:20371435-20371454 | None:intergenic | 25.0% |
| !! | ACAATTGGAGTTTTTGATAA+TGG | + | chr6_3:20371781-20371800 | Msa0944010:CDS | 25.0% |
| ! | AATAAGAATTAACGTAGACA+CGG | - | chr6_3:20371879-20371898 | None:intergenic | 25.0% |
| !! | TTAGATTTTCATGTTCTTCA+TGG | + | chr6_3:20371956-20371975 | Msa0944010:CDS | 25.0% |
| !! | ACTGTTGGTAGAATTAAATA+AGG | - | chr6_3:20372327-20372346 | None:intergenic | 25.0% |
| ! | AAAGCATACATAAAAACTGT+TGG | - | chr6_3:20372342-20372361 | None:intergenic | 25.0% |
| ! | AGTTTAATTAGTACTTAAGG+TGG | + | chr6_3:20372845-20372864 | Msa0944010:three_prime_UTR | 25.0% |
| ! | TAATATGATTTGAGCTACTT+TGG | + | chr6_3:20372928-20372947 | Msa0944010:three_prime_UTR | 25.0% |
| !! | AATATGATTTGAGCTACTTT+GGG | + | chr6_3:20372929-20372948 | Msa0944010:three_prime_UTR | 25.0% |
| TAATTCATCAATGACTACGA+CGG | + | chr6_3:20369367-20369386 | Msa0944010:exon | 30.0% | |
| AAGAGATTTGAATCCTCAAT+GGG | + | chr6_3:20369526-20369545 | Msa0944010:CDS | 30.0% | |
| TACAACGACAAAAAAACAAC+TGG | + | chr6_3:20369617-20369636 | Msa0944010:CDS | 30.0% | |
| ACAACGACAAAAAAACAACT+GGG | + | chr6_3:20369618-20369637 | Msa0944010:CDS | 30.0% | |
| TTTACTATCCGTTAGAGAAA+AGG | + | chr6_3:20369714-20369733 | Msa0944010:CDS | 30.0% | |
| TGGTTTGAAAATTTCTTACG+TGG | + | chr6_3:20369766-20369785 | Msa0944010:CDS | 30.0% | |
| !!! | TTCTTTTTTCTCACTATCAC+CGG | - | chr6_3:20369876-20369895 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTCTTCTCATCAC+CGG | - | chr6_3:20369924-20369943 | None:intergenic | 30.0% |
| TATGAAATTGTTCAGAAACG+AGG | + | chr6_3:20370106-20370125 | Msa0944010:CDS | 30.0% | |
| !!! | CTTTTTTCAAAGCTTGTGAT+TGG | + | chr6_3:20370280-20370299 | Msa0944010:CDS | 30.0% |
| AGAACAAAGAGTGAAAATGA+AGG | + | chr6_3:20370316-20370335 | Msa0944010:CDS | 30.0% | |
| GTGAAAATGAAGGTAAAGAT+TGG | + | chr6_3:20370326-20370345 | Msa0944010:CDS | 30.0% | |
| TGATTCTGATTCTAACCAAA+CGG | - | chr6_3:20370407-20370426 | None:intergenic | 30.0% | |
| TTATGATTGCAGTATGGATT+GGG | + | chr6_3:20370578-20370597 | Msa0944010:CDS | 30.0% | |
| !!! | GAATGAAGATTTGGTTTTTG+TGG | + | chr6_3:20370867-20370886 | Msa0944010:CDS | 30.0% |
| ATAACTAGAAACGGTTCAAA+CGG | - | chr6_3:20370901-20370920 | None:intergenic | 30.0% | |
| ! | CAATTGGTTTACTTGAAGTT+GGG | + | chr6_3:20371575-20371594 | Msa0944010:CDS | 30.0% |
| !!! | TTGGAGTTTTTGATAATGGA+AGG | + | chr6_3:20371785-20371804 | Msa0944010:CDS | 30.0% |
| TAATGCATTCTTGGTAGAAT+TGG | - | chr6_3:20372009-20372028 | None:intergenic | 30.0% | |
| ATGCATTACGTTAAACCATT+CGG | + | chr6_3:20372021-20372040 | Msa0944010:CDS | 30.0% | |
| AACTGCTATGAAGATAGTAA+CGG | + | chr6_3:20372071-20372090 | Msa0944010:CDS | 30.0% | |
| !! | ACTGTGTTTTATTGGTTAGA+TGG | + | chr6_3:20372231-20372250 | Msa0944010:CDS | 30.0% |
| ! | CTTTCTTGATTCTGATTTTG+AGG | + | chr6_3:20372358-20372377 | Msa0944010:CDS | 30.0% |
| !!! | TGATTCTGATTTTGAGGTTT+AGG | + | chr6_3:20372364-20372383 | Msa0944010:CDS | 30.0% |
| ! | AAAAGCACAAACCCTTTAAA+CGG | - | chr6_3:20372681-20372700 | None:intergenic | 30.0% |
| ATAATCTGATCAGAAAACGA+CGG | - | chr6_3:20372783-20372802 | None:intergenic | 30.0% | |
| TGGTCTGAATGTGTATAAAA+GGG | + | chr6_3:20372993-20373012 | Msa0944010:three_prime_UTR | 30.0% | |
| AAGAATCTAATGCCGAAAGA+CGG | + | chr6_3:20369434-20369453 | Msa0944010:CDS | 35.0% | |
| CAAGAGATTTGAATCCTCAA+TGG | + | chr6_3:20369525-20369544 | Msa0944010:CDS | 35.0% | |
| !!! | GGGAAGAGAAGTACTTTTTT+AGG | + | chr6_3:20369638-20369657 | Msa0944010:CDS | 35.0% |
| ! | AAAACGCTCCTTTTCTCTAA+CGG | - | chr6_3:20369725-20369744 | None:intergenic | 35.0% |
| ! | AGCGTTTTCTCTCAGATTAA+AGG | + | chr6_3:20369737-20369756 | Msa0944010:CDS | 35.0% |
| TCTCAGATTAAAGGTGAACT+TGG | + | chr6_3:20369746-20369765 | Msa0944010:CDS | 35.0% | |
| GAAAAAAGAAGAGAATCCAC+CGG | + | chr6_3:20369886-20369905 | Msa0944010:CDS | 35.0% | |
| ACAACGCGAACATATAGAAA+TGG | - | chr6_3:20370220-20370239 | None:intergenic | 35.0% | |
| TCTATATGTTCGCGTTGTTA+AGG | + | chr6_3:20370222-20370241 | Msa0944010:CDS | 35.0% | |
| ! | CTTCTTTAGAAGTTTCCGTT+TGG | + | chr6_3:20370389-20370408 | Msa0944010:CDS | 35.0% |
| ! | CAAATAACGGAGATTTCACT+CGG | + | chr6_3:20370448-20370467 | Msa0944010:CDS | 35.0% |
| ATGACGTTATGATTGCAGTA+TGG | + | chr6_3:20370572-20370591 | Msa0944010:CDS | 35.0% | |
| GTTATGATTGCAGTATGGAT+TGG | + | chr6_3:20370577-20370596 | Msa0944010:CDS | 35.0% | |
| GAGTCCTGAACTTTATGTTA+AGG | + | chr6_3:20370777-20370796 | Msa0944010:CDS | 35.0% | |
| TGAGCCTTAACATAAAGTTC+AGG | - | chr6_3:20370784-20370803 | None:intergenic | 35.0% | |
| ACCAAATCTTCATTCCAAGT+CGG | - | chr6_3:20370862-20370881 | None:intergenic | 35.0% | |
| TCGAGATGGTTTAATCTTTG+TGG | + | chr6_3:20371018-20371037 | Msa0944010:CDS | 35.0% | |
| GTTTAATCTTTGTGGTTCAG+AGG | + | chr6_3:20371026-20371045 | Msa0944010:CDS | 35.0% | |
| GAGGAAAATCTTTCTTACAC+AGG | + | chr6_3:20371045-20371064 | Msa0944010:CDS | 35.0% | |
| CATATTCGTGCTTGTTTAGA+AGG | + | chr6_3:20371475-20371494 | Msa0944010:CDS | 35.0% | |
| ACTTCAAGTAAACCAATTGG+AGG | - | chr6_3:20371574-20371593 | None:intergenic | 35.0% | |
| CCAACTTCAAGTAAACCAAT+TGG | - | chr6_3:20371577-20371596 | None:intergenic | 35.0% | |
| ! | CCAATTGGTTTACTTGAAGT+TGG | + | chr6_3:20371574-20371593 | Msa0944010:CDS | 35.0% |
| ATGGAATGAGCAATACACAT+GGG | + | chr6_3:20371732-20371751 | Msa0944010:CDS | 35.0% | |
| CCAATTGTTAAAACTGTGCA+AGG | - | chr6_3:20371769-20371788 | None:intergenic | 35.0% | |
| !! | CCTTGCACAGTTTTAACAAT+TGG | + | chr6_3:20371766-20371785 | Msa0944010:CDS | 35.0% |
| !! | TCGTTGATTGTTTTATTGCC+AGG | + | chr6_3:20371898-20371917 | Msa0944010:CDS | 35.0% |
| !! | TTGATTGTTTTATTGCCAGG+TGG | + | chr6_3:20371901-20371920 | Msa0944010:CDS | 35.0% |
| GGTTTAACGTAATGCATTCT+TGG | - | chr6_3:20372018-20372037 | None:intergenic | 35.0% | |
| TGAGGAAAAGTAAAGCGAAT+TGG | + | chr6_3:20372175-20372194 | Msa0944010:CDS | 35.0% | |
| ! | GCGAATTGGTTTAGATTAGT+TGG | + | chr6_3:20372189-20372208 | Msa0944010:CDS | 35.0% |
| GAACTTGATGAAGAGTTTGA+TGG | + | chr6_3:20372453-20372472 | Msa0944010:CDS | 35.0% | |
| !! | TTGATGGTTTTCCAACAATG+AGG | + | chr6_3:20372469-20372488 | Msa0944010:CDS | 35.0% |
| !! | GATTGGAAGCTTTGTTTAGT+TGG | + | chr6_3:20372586-20372605 | Msa0944010:CDS | 35.0% |
| GATGTTTGCGATATTCTGTT+TGG | + | chr6_3:20372629-20372648 | Msa0944010:CDS | 35.0% | |
| !! | ATTCTGTTTGGTAATGTCGT+TGG | + | chr6_3:20372641-20372660 | Msa0944010:CDS | 35.0% |
| ! | GTTTAAAGGGTTTGTGCTTT+TGG | + | chr6_3:20372680-20372699 | Msa0944010:CDS | 35.0% |
| AAGAAGTTCACGAAAACAGA+CGG | - | chr6_3:20372750-20372769 | None:intergenic | 35.0% | |
| ! | CTGTTTTCGTGAACTTCTTT+CGG | + | chr6_3:20372751-20372770 | Msa0944010:CDS | 35.0% |
| !!! | AGGTGGCACTGTTTTTTTAA+TGG | + | chr6_3:20372862-20372881 | Msa0944010:three_prime_UTR | 35.0% |
| GGAAAATGATGCTGAAAATG+AGG | + | chr6_3:20372950-20372969 | Msa0944010:three_prime_UTR | 35.0% | |
| GATGCTGAAAATGAGGAAAA+AGG | + | chr6_3:20372957-20372976 | Msa0944010:three_prime_UTR | 35.0% | |
| !! | AATGAGGAAAAAGGTGTTCT+TGG | + | chr6_3:20372966-20372985 | Msa0944010:three_prime_UTR | 35.0% |
| !! | AAAAAGGTGTTCTTGGTATG+TGG | + | chr6_3:20372973-20372992 | Msa0944010:three_prime_UTR | 35.0% |
| GTGGTCTGAATGTGTATAAA+AGG | + | chr6_3:20372992-20373011 | Msa0944010:three_prime_UTR | 35.0% | |
| AGGGTCTGAATGTGTATAAA+AGG | + | chr6_3:20373012-20373031 | Msa0944010:three_prime_UTR | 35.0% | |
| ! | TAAAAGGTTACCGTTGATTG+TGG | + | chr6_3:20373028-20373047 | Msa0944010:three_prime_UTR | 35.0% |
| CTATTTCAGTCCACAATCAA+CGG | - | chr6_3:20373041-20373060 | None:intergenic | 35.0% | |
| TAGAGAGAACAGAACAGCAA+CGG | - | chr6_3:20369301-20369320 | None:intergenic | 40.0% | |
| ! | TCTGCTGGAGTTTCTTCTTT+TGG | - | chr6_3:20369971-20369990 | None:intergenic | 40.0% |
| TGAAGGTAAAGATTGGGATC+AGG | + | chr6_3:20370333-20370352 | Msa0944010:CDS | 40.0% | |
| GATTCAAGCGTATACCATTG+CGG | - | chr6_3:20370535-20370554 | None:intergenic | 40.0% | |
| GCAATGGTATACGCTTGAAT+CGG | + | chr6_3:20370534-20370553 | Msa0944010:CDS | 40.0% | |
| CTTGAATCGGAAAATTCACC+AGG | + | chr6_3:20370547-20370566 | Msa0944010:CDS | 40.0% | |
| GCAATCATAACGTCATTTCC+TGG | - | chr6_3:20370568-20370587 | None:intergenic | 40.0% | |
| TTTATCTTTCTCCCAAGCTG+TGG | + | chr6_3:20370677-20370696 | Msa0944010:CDS | 40.0% | |
| AGTCTCAAATACCACAGCTT+GGG | - | chr6_3:20370691-20370710 | None:intergenic | 40.0% | |
| TAGTCTCAAATACCACAGCT+TGG | - | chr6_3:20370692-20370711 | None:intergenic | 40.0% | |
| ! | GCTGTGGTATTTGAGACTAA+CGG | + | chr6_3:20370693-20370712 | Msa0944010:CDS | 40.0% |
| CTTTATGTTAAGGCTCAGCT+TGG | + | chr6_3:20370787-20370806 | Msa0944010:CDS | 40.0% | |
| !!! | GGTGCACAGGTTTTTAAAAC+CGG | + | chr6_3:20370808-20370827 | Msa0944010:CDS | 40.0% |
| !!! | CACAGGTTTTTAAAACCGGT+CGG | + | chr6_3:20370812-20370831 | Msa0944010:CDS | 40.0% |
| !!! | GTTTTTAAAACCGGTCGGAT+TGG | + | chr6_3:20370817-20370836 | Msa0944010:CDS | 40.0% |
| !! | TCGGATTGGTTTAGTCAACT+CGG | + | chr6_3:20370831-20370850 | Msa0944010:CDS | 40.0% |
| !! | TCCGACTTGGAATGAAGATT+TGG | + | chr6_3:20370858-20370877 | Msa0944010:CDS | 40.0% |
| AAATGTCAATTAGTGGGAGC+AGG | - | chr6_3:20371428-20371447 | None:intergenic | 40.0% | |
| ! | GCTCCCACTAATTGACATTT+TGG | + | chr6_3:20371428-20371447 | Msa0944010:intron | 40.0% |
| ! | TTTTGGATTTGTCTCTGCAC+AGG | + | chr6_3:20371445-20371464 | Msa0944010:intron | 40.0% |
| ATTCGTGCTTGTTTAGAAGG+TGG | + | chr6_3:20371478-20371497 | Msa0944010:CDS | 40.0% | |
| TTACTTGAAGTTGGGATTCG+TGG | + | chr6_3:20371583-20371602 | Msa0944010:CDS | 40.0% | |
| TTCCGGTGAAAACCAAAGAT+GGG | + | chr6_3:20371620-20371639 | Msa0944010:CDS | 40.0% | |
| TGGAACAACTGATGCTTATG+TGG | + | chr6_3:20371648-20371667 | Msa0944010:CDS | 40.0% | |
| AACAACTGATGCTTATGTGG+TGG | + | chr6_3:20371651-20371670 | Msa0944010:CDS | 40.0% | |
| TGGCGAAATATGGTCCAAAA+TGG | + | chr6_3:20371671-20371690 | Msa0944010:CDS | 40.0% | |
| GGCGAAATATGGTCCAAAAT+GGG | + | chr6_3:20371672-20371691 | Msa0944010:CDS | 40.0% | |
| TGTATTGCTCATTCCATCTC+GGG | - | chr6_3:20371729-20371748 | None:intergenic | 40.0% | |
| GTGTATTGCTCATTCCATCT+CGG | - | chr6_3:20371730-20371749 | None:intergenic | 40.0% | |
| GATGGAATGAGCAATACACA+TGG | + | chr6_3:20371731-20371750 | Msa0944010:CDS | 40.0% | |
| AGATGCTAGAGATGTCAGAA+TGG | + | chr6_3:20371816-20371835 | Msa0944010:CDS | 40.0% | |
| GATGCTAGAGATGTCAGAAT+GGG | + | chr6_3:20371817-20371836 | Msa0944010:CDS | 40.0% | |
| ATGCTAGAGATGTCAGAATG+GGG | + | chr6_3:20371818-20371837 | Msa0944010:CDS | 40.0% | |
| TTCATGGCTGAGTTTAATGC+AGG | + | chr6_3:20371972-20371991 | Msa0944010:CDS | 40.0% | |
| GGTTCAGTTCATGCTTGATT+CGG | + | chr6_3:20372134-20372153 | Msa0944010:CDS | 40.0% | |
| !! | TTGATTCGGATACTCATGTG+TGG | + | chr6_3:20372148-20372167 | Msa0944010:CDS | 40.0% |
| ! | GTTCGACGACTGTGTTTTAT+TGG | + | chr6_3:20372223-20372242 | Msa0944010:CDS | 40.0% |
| TGAACTAAAACCGTTGTTGC+CGG | - | chr6_3:20372276-20372295 | None:intergenic | 40.0% | |
| TGAGGTTTAGGAACAGAATG+AGG | + | chr6_3:20372376-20372395 | Msa0944010:CDS | 40.0% | |
| GAGGTTTAGGAACAGAATGA+GGG | + | chr6_3:20372377-20372396 | Msa0944010:CDS | 40.0% | |
| ! | TTTTCCAACAATGAGGTCTG+TGG | + | chr6_3:20372476-20372495 | Msa0944010:CDS | 40.0% |
| !! | TTCTATGCTGTGCCGTTTAA+AGG | + | chr6_3:20372666-20372685 | Msa0944010:CDS | 40.0% |
| !! | TCTATGCTGTGCCGTTTAAA+GGG | + | chr6_3:20372667-20372686 | Msa0944010:CDS | 40.0% |
| !!! | TGGCTGGGTTTTATTATCTG+AGG | + | chr6_3:20372700-20372719 | Msa0944010:CDS | 40.0% |
| ! | TTTATTATCTGAGGCATCCG+AGG | + | chr6_3:20372709-20372728 | Msa0944010:CDS | 40.0% |
| CGACGGAAGTAGTTTCTGTA+AGG | + | chr6_3:20369384-20369403 | Msa0944010:CDS | 45.0% | |
| !! | TACGCGATCGTTGATTTCGA+CGG | + | chr6_3:20369476-20369495 | Msa0944010:CDS | 45.0% |
| !! | AGGTCATTGACTCTTGGTCA+AGG | - | chr6_3:20369574-20369593 | None:intergenic | 45.0% |
| !! | TCTCAGAGGTCATTGACTCT+TGG | - | chr6_3:20369580-20369599 | None:intergenic | 45.0% |
| ATTGATCTCCATCGTCTCAG+AGG | - | chr6_3:20369594-20369613 | None:intergenic | 45.0% | |
| ! | GGAAGCACGTTTGTGAAAAG+CGG | + | chr6_3:20369677-20369696 | Msa0944010:CDS | 45.0% |
| !! | TTACCTGTTACCGATTCAGC+CGG | + | chr6_3:20369797-20369816 | Msa0944010:CDS | 45.0% |
| CTCTTCTTTCTTGTCCTCAC+CGG | - | chr6_3:20369819-20369838 | None:intergenic | 45.0% | |
| GAAAGCTGAAGAGAAGTCAC+CGG | + | chr6_3:20369838-20369857 | Msa0944010:CDS | 45.0% | |
| ! | TTTTTCTTCTCATCACCGGC+TGG | - | chr6_3:20369920-20369939 | None:intergenic | 45.0% |
| ACATCCTTCGTTTCAGCTAC+CGG | - | chr6_3:20370067-20370086 | None:intergenic | 45.0% | |
| AACGGAGATTTCACTCGGAA+CGG | + | chr6_3:20370453-20370472 | Msa0944010:CDS | 45.0% | |
| ! | GTATACCATTGCGGTGCTAA+TGG | - | chr6_3:20370526-20370545 | None:intergenic | 45.0% |
| CGACTCCTGAAAAGCTTCAT+CGG | - | chr6_3:20370611-20370630 | None:intergenic | 45.0% | |
| !! | ATGAAGCTTTTCAGGAGTCG+TGG | + | chr6_3:20370611-20370630 | Msa0944010:CDS | 45.0% |
| TAAACTTTCGCTCGTGTCTC+CGG | - | chr6_3:20370661-20370680 | None:intergenic | 45.0% | |
| ACTAACGGTTATCCAAACCC+AGG | + | chr6_3:20370708-20370727 | Msa0944010:CDS | 45.0% | |
| CAAACCCAGGATTTACAGCT+GGG | + | chr6_3:20370721-20370740 | Msa0944010:CDS | 45.0% | |
| CAATCCCAGCTGTAAATCCT+GGG | - | chr6_3:20370728-20370747 | None:intergenic | 45.0% | |
| CAGGATTTACAGCTGGGATT+GGG | + | chr6_3:20370727-20370746 | Msa0944010:CDS | 45.0% | |
| GTTGACTAAACCAATCCGAC+CGG | - | chr6_3:20370830-20370849 | None:intergenic | 45.0% | |
| TGGGAAAACCAAGATCCATG+TGG | + | chr6_3:20370954-20370973 | Msa0944010:CDS | 45.0% | |
| TTAACTGCTTCGCAGAAGCA+CGG | - | chr6_3:20371546-20371565 | None:intergenic | 45.0% | |
| CAGTTAACGAAGCCTCCAAT+TGG | + | chr6_3:20371559-20371578 | Msa0944010:CDS | 45.0% | |
| TGGAGCAACGAATCTTCTTC+CGG | + | chr6_3:20371603-20371622 | Msa0944010:CDS | 45.0% | |
| CTTCCGGTGAAAACCAAAGA+TGG | + | chr6_3:20371619-20371638 | Msa0944010:CDS | 45.0% | |
| !!! | GTCCCATCTTTGGTTTTCAC+CGG | - | chr6_3:20371625-20371644 | None:intergenic | 45.0% |
| AAAACCAAAGATGGGACACG+TGG | + | chr6_3:20371628-20371647 | Msa0944010:CDS | 45.0% | |
| ! | GCTTATGTGGTGGCGAAATA+TGG | + | chr6_3:20371661-20371680 | Msa0944010:CDS | 45.0% |
| GAACCAGGACTATTGTAGAC+CGG | + | chr6_3:20371698-20371717 | Msa0944010:CDS | 45.0% | |
| AAACCGGTCTACAATAGTCC+TGG | - | chr6_3:20371704-20371723 | None:intergenic | 45.0% | |
| CATTCCATCTCGGGTTAAAC+CGG | - | chr6_3:20371720-20371739 | None:intergenic | 45.0% | |
| GAATGGGGAAAATTCGTGTG+CGG | + | chr6_3:20371833-20371852 | Msa0944010:CDS | 45.0% | |
| TTACGTTAAACCATTCGGCC+CGG | + | chr6_3:20372026-20372045 | Msa0944010:CDS | 45.0% | |
| TCAAAACATCTTGCTGACCC+GGG | - | chr6_3:20372047-20372066 | None:intergenic | 45.0% | |
| CTCAAAACATCTTGCTGACC+CGG | - | chr6_3:20372048-20372067 | None:intergenic | 45.0% | |
| TAGTAACGGCTCGTTTAGCT+CGG | + | chr6_3:20372085-20372104 | Msa0944010:CDS | 45.0% | |
| ATACTCATGTGTGGAGCATG+AGG | + | chr6_3:20372157-20372176 | Msa0944010:CDS | 45.0% | |
| GTTAGATGGAATTCGCACGT+GGG | + | chr6_3:20372245-20372264 | Msa0944010:CDS | 45.0% | |
| !! | AATGAGGGTGCCAAAGAACA+TGG | + | chr6_3:20372392-20372411 | Msa0944010:CDS | 45.0% |
| ATCCTCGGATCCATGTTCTT+TGG | - | chr6_3:20372405-20372424 | None:intergenic | 45.0% | |
| CAAACTTACCATGTCCACGT+AGG | - | chr6_3:20372430-20372449 | None:intergenic | 45.0% | |
| CTACGTGGACATGGTAAGTT+TGG | + | chr6_3:20372428-20372447 | Msa0944010:CDS | 45.0% | |
| ACTTCCACAGACCTCATTGT+TGG | - | chr6_3:20372483-20372502 | None:intergenic | 45.0% | |
| AACAATGAGGTCTGTGGAAG+TGG | + | chr6_3:20372482-20372501 | Msa0944010:CDS | 45.0% | |
| TGGTTCGAATCAGGTACGAT+AGG | + | chr6_3:20372502-20372521 | Msa0944010:CDS | 45.0% | |
| GGTTCGAATCAGGTACGATA+GGG | + | chr6_3:20372503-20372522 | Msa0944010:CDS | 45.0% | |
| ! | AAAGGGTTTGTGCTTTTGGC+TGG | + | chr6_3:20372684-20372703 | Msa0944010:CDS | 45.0% |
| !! | AAGGGTTTGTGCTTTTGGCT+GGG | + | chr6_3:20372685-20372704 | Msa0944010:CDS | 45.0% |
| CTAATGCCGAAAGACGGTCA+AGG | + | chr6_3:20369440-20369459 | Msa0944010:CDS | 50.0% | |
| GCTGTTCCTTGACCGTCTTT+CGG | - | chr6_3:20369449-20369468 | None:intergenic | 50.0% | |
| TCGAGTTTCTCGTCCCATTG+AGG | - | chr6_3:20369542-20369561 | None:intergenic | 50.0% | |
| !! | GTCAATGACCTCTGAGACGA+TGG | + | chr6_3:20369583-20369602 | Msa0944010:CDS | 50.0% |
| ! | CTCACTATCACCGGCTGATT+CGG | - | chr6_3:20369867-20369886 | None:intergenic | 50.0% |
| AGCAGAGAAAACTCCGTCAC+CGG | + | chr6_3:20369985-20370004 | Msa0944010:CDS | 50.0% | |
| ACCGGAGGTTGTTAATCCAC+CGG | + | chr6_3:20370045-20370064 | Msa0944010:CDS | 50.0% | |
| !! | ACCGGTGGATTAACAACCTC+CGG | - | chr6_3:20370049-20370068 | None:intergenic | 50.0% |
| AGTTCCGAAGAGAGTTCCAC+CGG | + | chr6_3:20370495-20370514 | Msa0944010:CDS | 50.0% | |
| ACAGTCCATTAGCACCGCAA+TGG | + | chr6_3:20370518-20370537 | Msa0944010:CDS | 50.0% | |
| ! | GCAAGCCGATGAAGCTTTTC+AGG | + | chr6_3:20370603-20370622 | Msa0944010:CDS | 50.0% |
| !! | TTTTCAGGAGTCGTGGCAGT+CGG | + | chr6_3:20370618-20370637 | Msa0944010:CDS | 50.0% |
| GGATTCCGGTGGTTTGATAC+CGG | + | chr6_3:20370639-20370658 | Msa0944010:CDS | 50.0% | |
| TGTCTCCGGTATCAAACCAC+CGG | - | chr6_3:20370647-20370666 | None:intergenic | 50.0% | |
| CCAGCTGTAAATCCTGGGTT+TGG | - | chr6_3:20370723-20370742 | None:intergenic | 50.0% | |
| CCAAACCCAGGATTTACAGC+TGG | + | chr6_3:20370720-20370739 | Msa0944010:CDS | 50.0% | |
| CCAATCCCAGCTGTAAATCC+TGG | - | chr6_3:20370729-20370748 | None:intergenic | 50.0% | |
| CCAGGATTTACAGCTGGGAT+TGG | + | chr6_3:20370726-20370745 | Msa0944010:CDS | 50.0% | |
| GATTTACAGCTGGGATTGGG+TGG | + | chr6_3:20370730-20370749 | Msa0944010:CDS | 50.0% | |
| AGGACTCCGAACCTTAGGTT+CGG | - | chr6_3:20370764-20370783 | None:intergenic | 50.0% | |
| AGTTCAGGACTCCGAACCTT+AGG | - | chr6_3:20370769-20370788 | None:intergenic | 50.0% | |
| TCAACTCGGCTAATCCGACT+TGG | + | chr6_3:20370845-20370864 | Msa0944010:CDS | 50.0% | |
| TCGAGCGGAGATTAGACGAT+CGG | + | chr6_3:20370983-20371002 | Msa0944010:CDS | 50.0% | |
| GGACGGATGTGAAATCGAGA+TGG | + | chr6_3:20371004-20371023 | Msa0944010:CDS | 50.0% | |
| GGATTTGTCTCTGCACAGGT+AGG | + | chr6_3:20371449-20371468 | Msa0944010:intron | 50.0% | |
| TGTTCCACGTGTCCCATCTT+TGG | - | chr6_3:20371635-20371654 | None:intergenic | 50.0% | |
| ! | GTCCAAAATGGGTTCGAACC+AGG | + | chr6_3:20371683-20371702 | Msa0944010:CDS | 50.0% |
| !! | GTCCTGGTTCGAACCCATTT+TGG | - | chr6_3:20371688-20371707 | None:intergenic | 50.0% |
| ! | TAGACCGGTTTAACCCGAGA+TGG | + | chr6_3:20371713-20371732 | Msa0944010:CDS | 50.0% |
| ! | TTTTATTGCCAGGTGGTGCG+AGG | + | chr6_3:20371908-20371927 | Msa0944010:CDS | 50.0% |
| TACGTTAAACCATTCGGCCC+GGG | + | chr6_3:20372027-20372046 | Msa0944010:CDS | 50.0% | |
| ! | TCGTTTAGCTCGGTCTGAAC+CGG | + | chr6_3:20372095-20372114 | Msa0944010:CDS | 50.0% |
| ACCACTTCTGAACCCAAAGC+CGG | - | chr6_3:20372117-20372136 | None:intergenic | 50.0% | |
| GGTTAGATGGAATTCGCACG+TGG | + | chr6_3:20372244-20372263 | Msa0944010:CDS | 50.0% | |
| AATTCGCACGTGGGTGAATC+CGG | + | chr6_3:20372254-20372273 | Msa0944010:CDS | 50.0% | |
| TGCCAAAGAACATGGATCCG+AGG | + | chr6_3:20372400-20372419 | Msa0944010:CDS | 50.0% | |
| ATGTCCACGTAGGACATCCT+CGG | - | chr6_3:20372420-20372439 | None:intergenic | 50.0% | |
| CTGTGGAAGTGGTTCGAATC+AGG | + | chr6_3:20372493-20372512 | Msa0944010:CDS | 50.0% | |
| ! | GGGAGGGCACAAAGTTTGAT+TGG | + | chr6_3:20372540-20372559 | Msa0944010:CDS | 50.0% |
| AGCTTCCAATCTCTCACCCT+GGG | - | chr6_3:20372577-20372596 | None:intergenic | 50.0% | |
| AAGCTTCCAATCTCTCACCC+TGG | - | chr6_3:20372578-20372597 | None:intergenic | 50.0% | |
| CAAACATCGCTGTAGCACGT+GGG | - | chr6_3:20372617-20372636 | None:intergenic | 50.0% | |
| ! | TCACCGGCTGAATCGGTAAC+AGG | - | chr6_3:20369803-20369822 | None:intergenic | 55.0% |
| !! | TGTTACCGATTCAGCCGGTG+AGG | + | chr6_3:20369802-20369821 | Msa0944010:CDS | 55.0% |
| ! | CTTGTCCTCACCGGCTGAAT+CGG | - | chr6_3:20369810-20369829 | None:intergenic | 55.0% |
| TCACCGGTAACCGAATCAGC+CGG | + | chr6_3:20369854-20369873 | Msa0944010:CDS | 55.0% | |
| !! | TCACCGGCTGATTCGGTTAC+CGG | - | chr6_3:20369860-20369879 | None:intergenic | 55.0% |
| ! | CTTCTCATCACCGGCTGGTT+CGG | - | chr6_3:20369915-20369934 | None:intergenic | 55.0% |
| !!! | GGTGACGGAGTTTTCTCTGC+TGG | - | chr6_3:20369986-20370005 | None:intergenic | 55.0% |
| TCCGTCACCGGAAAATCCAC+CGG | + | chr6_3:20369997-20370016 | Msa0944010:CDS | 55.0% | |
| !! | GGATTCGCCGGTGGATTTTC+CGG | - | chr6_3:20370007-20370026 | None:intergenic | 55.0% |
| AAATCCACCGGCGAATCCAC+CGG | + | chr6_3:20370009-20370028 | Msa0944010:CDS | 55.0% | |
| TTAACAACCTCCGGTGCAGG+CGG | - | chr6_3:20370040-20370059 | None:intergenic | 55.0% | |
| GGATTAACAACCTCCGGTGC+AGG | - | chr6_3:20370043-20370062 | None:intergenic | 55.0% | |
| TCCACCGGTAGCTGAAACGA+AGG | + | chr6_3:20370060-20370079 | Msa0944010:CDS | 55.0% | |
| TCCTTCGTTTCAGCTACCGG+TGG | - | chr6_3:20370064-20370083 | None:intergenic | 55.0% | |
| CAGAGATCGAAGCAGAAGCG+CGG | + | chr6_3:20370171-20370190 | Msa0944010:CDS | 55.0% | |
| CTGTCCGGTGGAACTCTCTT+CGG | - | chr6_3:20370502-20370521 | None:intergenic | 55.0% | |
| !! | TGCGGTGCTAATGGACTGTC+CGG | - | chr6_3:20370517-20370536 | None:intergenic | 55.0% |
| ACAGCTGGGATTGGGTGGTT+TGG | + | chr6_3:20370735-20370754 | Msa0944010:CDS | 55.0% | |
| CAGCTGGGATTGGGTGGTTT+GGG | + | chr6_3:20370736-20370755 | Msa0944010:CDS | 55.0% | |
| ! | TGGTTTGGGCTCCGAACCTA+AGG | + | chr6_3:20370750-20370769 | Msa0944010:CDS | 55.0% |
| TGGGCTCCGAACCTAAGGTT+CGG | + | chr6_3:20370755-20370774 | Msa0944010:CDS | 55.0% | |
| !! | TAAGGCTCAGCTTGGTGCAC+AGG | + | chr6_3:20370795-20370814 | Msa0944010:CDS | 55.0% |
| GATCGACGCCACATGGATCT+TGG | - | chr6_3:20370965-20370984 | None:intergenic | 55.0% | |
| GCGGAGATTAGACGATCGGA+CGG | + | chr6_3:20370987-20371006 | Msa0944010:CDS | 55.0% | |
| !! | ACCGGCTTTGGGTTCAGAAG+TGG | + | chr6_3:20372113-20372132 | Msa0944010:CDS | 55.0% |
| GTGGGTGAATCCGGCAACAA+CGG | + | chr6_3:20372263-20372282 | Msa0944010:CDS | 55.0% | |
| GAGGATGTCCTACGTGGACA+TGG | + | chr6_3:20372419-20372438 | Msa0944010:CDS | 55.0% | |
| GCAAACATCGCTGTAGCACG+TGG | - | chr6_3:20372618-20372637 | None:intergenic | 55.0% | |
| GGCATGTCACCACGAAACCT+CGG | - | chr6_3:20372729-20372748 | None:intergenic | 55.0% | |
| !! | TCACCGGCTGGTTCGGTTAC+CGG | - | chr6_3:20369908-20369927 | None:intergenic | 60.0% |
| !! | GCCGGTGGATTTTCCGGTGA+CGG | - | chr6_3:20370001-20370020 | None:intergenic | 60.0% |
| !! | GGTGCTAATGGACTGTCCGG+TGG | - | chr6_3:20370514-20370533 | None:intergenic | 60.0% |
| GAGTCGTGGCAGTCGGATTC+CGG | + | chr6_3:20370625-20370644 | Msa0944010:CDS | 60.0% | |
| !! | TCCATGTGGCGTCGATCGAG+CGG | + | chr6_3:20370968-20370987 | Msa0944010:CDS | 60.0% |
| CCAGGTGGTGCGAGGAGAAT+GGG | + | chr6_3:20371916-20371935 | Msa0944010:CDS | 60.0% | |
| ! | AGCTCGGTCTGAACCGGCTT+TGG | + | chr6_3:20372101-20372120 | Msa0944010:CDS | 60.0% |
| ! | GCTCGGTCTGAACCGGCTTT+GGG | + | chr6_3:20372102-20372121 | Msa0944010:CDS | 60.0% |
| GGATCCGAGGATGTCCTACG+TGG | + | chr6_3:20372413-20372432 | Msa0944010:CDS | 60.0% | |
| CGATAGGGTGCGTGCTCTTG+CGG | + | chr6_3:20372518-20372537 | Msa0944010:CDS | 60.0% | |
| GATAGGGTGCGTGCTCTTGC+GGG | + | chr6_3:20372519-20372538 | Msa0944010:CDS | 60.0% | |
| ATAGGGTGCGTGCTCTTGCG+GGG | + | chr6_3:20372520-20372539 | Msa0944010:CDS | 60.0% | |
| ATTGGCGACGTTGCAGCCCA+GGG | + | chr6_3:20372558-20372577 | Msa0944010:CDS | 60.0% | |
| TGCAGCCCAGGGTGAGAGAT+TGG | + | chr6_3:20372569-20372588 | Msa0944010:CDS | 60.0% | |
| ! | CTGAGGCATCCGAGGTTTCG+TGG | + | chr6_3:20372717-20372736 | Msa0944010:CDS | 60.0% |
| CCACCGGTAACCGAACCAGC+CGG | + | chr6_3:20369902-20369921 | Msa0944010:CDS | 65.0% | |
| ! | GGAGTTGCCGGTGGATTCGC+CGG | - | chr6_3:20370019-20370038 | None:intergenic | 65.0% |
| TCGTGGCAGTCGGATTCCGG+TGG | + | chr6_3:20370628-20370647 | Msa0944010:CDS | 65.0% | |
| TCCGCTCGATCGACGCCACA+TGG | - | chr6_3:20370972-20370991 | None:intergenic | 65.0% | |
| GCCAGGTGGTGCGAGGAGAA+TGG | + | chr6_3:20371915-20371934 | Msa0944010:CDS | 65.0% | |
| CCCATTCTCCTCGCACCACC+TGG | - | chr6_3:20371919-20371938 | None:intergenic | 65.0% | |
| TCTTGCTGACCCGGGCCGAA+TGG | - | chr6_3:20372039-20372058 | None:intergenic | 65.0% | |
| GATTGGCGACGTTGCAGCCC+AGG | + | chr6_3:20372557-20372576 | Msa0944010:CDS | 65.0% | |
| !! | CCGGCTGGTTCGGTTACCGG+TGG | - | chr6_3:20369905-20369924 | None:intergenic | 70.0% |
| ! | GTTGCCGGTGGATTCGCCGG+TGG | - | chr6_3:20370016-20370035 | None:intergenic | 70.0% |
| ACCGGCAACTCCGCCTGCAC+CGG | + | chr6_3:20370027-20370046 | Msa0944010:CDS | 70.0% | |
| TCCGGTGCAGGCGGAGTTGC+CGG | - | chr6_3:20370031-20370050 | None:intergenic | 70.0% | |
| GGTGCGTGCTCTTGCGGGGA+GGG | + | chr6_3:20372524-20372543 | Msa0944010:CDS | 70.0% | |
| GGTGCAGGCGGAGTTGCCGG+TGG | - | chr6_3:20370028-20370047 | None:intergenic | 75.0% | |
| GGCAACTCCGCCTGCACCGG+AGG | + | chr6_3:20370030-20370049 | Msa0944010:CDS | 75.0% | |
| GGGTGCGTGCTCTTGCGGGG+AGG | + | chr6_3:20372523-20372542 | Msa0944010:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 20369193 | 20373062 | 20369193 | ID=Msa0944010;Name=Msa0944010 |
| chr6_3 | mRNA | 20369193 | 20373062 | 20369193 | ID=Msa0944010-mRNA-1;Parent=Msa0944010;Name=Msa0944010-mRNA-1;_AED=0.00;_eAED=0.00;_QI=184|1|1|1|1|1|2|256|1009 |
| chr6_3 | exon | 20369193 | 20371066 | 20369193 | ID=Msa0944010-mRNA-1:exon:6033;Parent=Msa0944010-mRNA-1 |
| chr6_3 | exon | 20371467 | 20373062 | 20371467 | ID=Msa0944010-mRNA-1:exon:6034;Parent=Msa0944010-mRNA-1 |
| chr6_3 | five_prime_UTR | 20369193 | 20369376 | 20369193 | ID=Msa0944010-mRNA-1:five_prime_utr;Parent=Msa0944010-mRNA-1 |
| chr6_3 | CDS | 20369377 | 20371066 | 20369377 | ID=Msa0944010-mRNA-1:cds;Parent=Msa0944010-mRNA-1 |
| chr6_3 | CDS | 20371467 | 20372806 | 20371467 | ID=Msa0944010-mRNA-1:cds;Parent=Msa0944010-mRNA-1 |
| chr6_3 | three_prime_UTR | 20372807 | 20373062 | 20372807 | ID=Msa0944010-mRNA-1:three_prime_utr;Parent=Msa0944010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
