AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466880 MtrunA17_Chr3g0121051 96.018 226 9 0 1 226 1 226 8.55e-156 431
Msa0466880 MtrunA17_Chr2g0290201 72.589 197 54 0 12 208 98 294 6.08e-108 313
Msa0466880 MtrunA17_Chr3g0121061 81.132 53 10 0 133 185 17 69 4.75e-24 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466880 AT3G07800.1 71.498 207 59 0 16 222 30 236 4.61e-111 318
Msa0466880 AT5G23070.1 67.368 190 61 1 17 205 77 266 5.40e-98 287

Find 80 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAACATGTTTACTTGATTC+TGG 0.263450 3_3:+68005862 Msa0466880:three_prime_UTR
CAACTGGGGCTGCCTCAATA+AGG 0.285622 3_3:-68005794 None:intergenic
TTGAGTGTTGATTGGGTTAG+TGG 0.290744 3_3:-68004002 None:intergenic
TTGTTTGATAAATAATTAAT+AGG 0.293034 3_3:+68005814 Msa0466880:exon
GGTAAAATTGTCGTCGTTGC+AGG 0.308301 3_3:+68005391 Msa0466880:CDS
ATCCAAATGGCTTCTTCCTT+TGG 0.309777 3_3:+68004069 Msa0466880:exon
TTTGTGGGTCCCATGTTTGC+TGG 0.311613 3_3:+68004138 Msa0466880:CDS
TGGATGCAGTTGGATGTTAT+TGG 0.318715 3_3:+68005304 Msa0466880:intron
AGAACTCAGAAGACTGAAAA+AGG 0.320340 3_3:-68005976 None:intergenic
GAGAAACAAACTGAACTAAT+TGG 0.334941 3_3:+68005660 Msa0466880:CDS
GTACCTGTGTTGTGTGATTC+AGG 0.343430 3_3:+68005888 Msa0466880:three_prime_UTR
TTAATTATTTATCAAACAAC+TGG 0.346132 3_3:-68005810 None:intergenic
TCTTTGAACAACATCAAATC+TGG 0.352909 3_3:-68004435 None:intergenic
AAGAGGGTTTGAGTGTTGAT+TGG 0.357561 3_3:-68004010 None:intergenic
CAAATCTGGCAATGCCCAAC+AGG 0.359213 3_3:-68004421 None:intergenic
ATAGTACATTATGACAAAAT+AGG 0.360507 3_3:-68006037 None:intergenic
CACCAAAGGAAGAAGCCATT+TGG 0.377208 3_3:-68004071 None:intergenic
CAGGCAGTTTGTTCAACAAC+AGG 0.392812 3_3:+68005907 Msa0466880:three_prime_UTR
ATGGCTTCTTCCTTTGGTGT+TGG 0.395097 3_3:+68004075 Msa0466880:CDS
CGGGATTAAATTTCCCTGTT+GGG 0.403088 3_3:+68004407 Msa0466880:CDS
CAAATTCAAATTAATCCAAA+TGG 0.419041 3_3:+68004056 Msa0466880:exon
AATTGTCGTCGTTGCAGGCC+TGG 0.427705 3_3:+68005396 Msa0466880:CDS
CGGCGAGATCCATCTCTTTG+TGG 0.427846 3_3:+68004122 Msa0466880:CDS
AGAGGGTTTGAGTGTTGATT+GGG 0.428886 3_3:-68004009 None:intergenic
TGGTTCTTTAGGAGAAGCTT+TGG 0.432729 3_3:+68005534 Msa0466880:intron
TAATTAATAGGAATATAAAA+TGG 0.435366 3_3:+68005826 Msa0466880:three_prime_UTR
AAGGGAAATTGGAGAGAAGA+GGG 0.448156 3_3:-68004026 None:intergenic
TTCTTTACCTTGAGGAAGAC+GGG 0.457820 3_3:+68005636 Msa0466880:CDS
GGCGAGATCCATCTCTTTGT+GGG 0.460938 3_3:+68004123 Msa0466880:CDS
TTAGTTACAGTATCAGCAAT+TGG 0.463498 3_3:-68005576 None:intergenic
GCTGTCAAGAAGTGTGTCTT+CGG 0.463980 3_3:+68005747 Msa0466880:CDS
AACTGGGGCTGCCTCAATAA+GGG 0.464936 3_3:-68005793 None:intergenic
CGGACTTAATACGACGAAGA+AGG 0.470773 3_3:-68004173 None:intergenic
ACATAGTGATGGCGGCAAAC+CGG 0.478921 3_3:-68005702 None:intergenic
CGTCTTCCTCAAGGTAAAGA+AGG 0.488284 3_3:-68005634 None:intergenic
CGGTCATGAGGCCTATCAAA+AGG 0.492616 3_3:+68004464 Msa0466880:CDS
TCTCACTCTCACTCATCATC+CGG 0.499669 3_3:+68004102 Msa0466880:CDS
ACGGGATTAAATTTCCCTGT+TGG 0.499672 3_3:+68004406 Msa0466880:CDS
GTGAGAAGAGCCAACACCAA+AGG 0.502131 3_3:-68004085 None:intergenic
CTTCTTTACCTTGAGGAAGA+CGG 0.507473 3_3:+68005635 Msa0466880:CDS
TGGAAGTGATTCCCTTATTG+AGG 0.511120 3_3:+68005782 Msa0466880:CDS
ATGTTGTTCAAAGATAAATA+CGG 0.514186 3_3:+68004444 Msa0466880:CDS
AAAGGGAAATTGGAGAGAAG+AGG 0.516974 3_3:-68004027 None:intergenic
TGCCGCCATCACTATGTGAA+TGG 0.524204 3_3:+68005708 Msa0466880:CDS
AACAAACTGAACTAATTGGT+GGG 0.528191 3_3:+68005664 Msa0466880:CDS
TTTCTCTCCCGTCTTCCTCA+AGG 0.528615 3_3:-68005643 None:intergenic
AATATAAAATGGTCTTTATG+TGG 0.530343 3_3:+68005837 Msa0466880:three_prime_UTR
CAGCTCGTTGTGAACTATGC+GGG 0.536830 3_3:+68005604 Msa0466880:CDS
GGACTTAATACGACGAAGAA+GGG 0.537672 3_3:-68004172 None:intergenic
ATTATGTGTGTGATATATAC+AGG 0.540169 3_3:+68006000 Msa0466880:three_prime_UTR
ACTCTGTTGTGACCCATGAC+GGG 0.543331 3_3:+68004388 Msa0466880:CDS
TGGGGCTGATTTATACATGC+CGG 0.547414 3_3:+68005683 Msa0466880:CDS
GGGAAATTTAATCCCGTCAT+GGG 0.553176 3_3:-68004400 None:intergenic
ACCTCAAGTAATCACCATCC+AGG 0.557271 3_3:-68005414 None:intergenic
AGTGTTGATTGGGTTAGTGG+TGG 0.558629 3_3:-68003999 None:intergenic
TTTGTCAAAACTTGTGAACA+AGG 0.564704 3_3:-68006083 None:intergenic
AAACAAACTGAACTAATTGG+TGG 0.568465 3_3:+68005663 Msa0466880:CDS
AGGGAAATTTAATCCCGTCA+TGG 0.569407 3_3:-68004401 None:intergenic
GTCGTCGTTGCAGGCCTGGA+TGG 0.573763 3_3:+68005400 Msa0466880:CDS
ATTAAGTCCGAAGTTGATAA+CGG 0.580529 3_3:+68004186 Msa0466880:CDS
ACATGGGACCCACAAAGAGA+TGG 0.584227 3_3:-68004131 None:intergenic
TGCAAGGCTGCTGATGAAGA+TGG 0.584415 3_3:+68005370 Msa0466880:CDS
AGTCCGAAGTTGATAACGGC+AGG 0.586524 3_3:+68004190 Msa0466880:CDS
GCCTGGATGGTGATTACTTG+AGG 0.593913 3_3:+68005413 Msa0466880:CDS
TAATTATTTATCAAACAACT+GGG 0.597416 3_3:-68005809 None:intergenic
TGTGAATGGTCAAGTTGTTG+TGG 0.597690 3_3:+68005722 Msa0466880:CDS
GACTCTGTTGTGACCCATGA+CGG 0.598002 3_3:+68004387 Msa0466880:CDS
GTACCTGCCGTTATCAACTT+CGG 0.610552 3_3:-68004193 None:intergenic
AACGCGCCTTCTTTACCTTG+AGG 0.616597 3_3:+68005628 Msa0466880:CDS
CAAAGATAAATACGGTCATG+AGG 0.624640 3_3:+68004452 Msa0466880:CDS
CACAAAGAGATGGATCTCGC+CGG 0.628278 3_3:-68004121 None:intergenic
ACAAACTGAACTAATTGGTG+GGG 0.635305 3_3:+68005665 Msa0466880:CDS
CTTGACCATTCACATAGTGA+TGG 0.636820 3_3:-68005713 None:intergenic
AAATCTGGCAATGCCCAACA+GGG 0.637311 3_3:-68004420 None:intergenic
GACCATTCACATAGTGATGG+CGG 0.647772 3_3:-68005710 None:intergenic
ATGTGAAACGCAATTCAACA+TGG 0.653252 3_3:-68005930 None:intergenic
AATTATTTATCAAACAACTG+GGG 0.668394 3_3:-68005808 None:intergenic
GGATGTTATTGGTATAGACG+AGG 0.669586 3_3:+68005315 Msa0466880:CDS
CTGCCTGAATCACACAACAC+AGG 0.698335 3_3:-68005891 None:intergenic
ACAGCTCGTTGTGAACTATG+CGG 0.719807 3_3:+68005603 Msa0466880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAATAACATAATGTA+TGG + chr3_3:68005224-68005243 Msa0466880:intron 10.0%
!! TTGTTTGATAAATAATTAAT+AGG + chr3_3:68005814-68005833 Msa0466880:exon 10.0%
!! TAATTAATAGGAATATAAAA+TGG + chr3_3:68005826-68005845 Msa0466880:three_prime_UTR 10.0%
!! TAAATTAATAACATAATGTA+TGG + chr3_3:68005224-68005243 Msa0466880:intron 10.0%
!! TTGTTTGATAAATAATTAAT+AGG + chr3_3:68005814-68005833 Msa0466880:exon 10.0%
!! TAATTAATAGGAATATAAAA+TGG + chr3_3:68005826-68005845 Msa0466880:three_prime_UTR 10.0%
!! ATTTGAATTTGAATTTGAAA+GGG - chr3_3:68004047-68004066 None:intergenic 15.0%
!! AATTTGAATTTGAATTTGAA+AGG - chr3_3:68004048-68004067 None:intergenic 15.0%
!!! ATTATCATAATTTTTTGTGA+AGG + chr3_3:68004319-68004338 Msa0466880:intron 15.0%
!! TTCAAAAGAAAAAAAAGTTA+TGG + chr3_3:68004843-68004862 Msa0466880:intron 15.0%
!!! GTAAGTTTTTTTTTAAATCT+CGG + chr3_3:68005189-68005208 Msa0466880:intron 15.0%
!! TAATTATTTATCAAACAACT+GGG - chr3_3:68005812-68005831 None:intergenic 15.0%
!! TTAATTATTTATCAAACAAC+TGG - chr3_3:68005813-68005832 None:intergenic 15.0%
!! ATTTGAATTTGAATTTGAAA+GGG - chr3_3:68004047-68004066 None:intergenic 15.0%
!! AATTTGAATTTGAATTTGAA+AGG - chr3_3:68004048-68004067 None:intergenic 15.0%
!!! ATTATCATAATTTTTTGTGA+AGG + chr3_3:68004319-68004338 Msa0466880:intron 15.0%
!! TTCAAAAGAAAAAAAAGTTA+TGG + chr3_3:68004843-68004862 Msa0466880:intron 15.0%
!!! GTAAGTTTTTTTTTAAATCT+CGG + chr3_3:68005189-68005208 Msa0466880:intron 15.0%
!! TAATTATTTATCAAACAACT+GGG - chr3_3:68005812-68005831 None:intergenic 15.0%
!! TTAATTATTTATCAAACAAC+TGG - chr3_3:68005813-68005832 None:intergenic 15.0%
!! CAAATTCAAATTAATCCAAA+TGG + chr3_3:68004056-68004075 Msa0466880:exon 20.0%
!! ATGTTGTTCAAAGATAAATA+CGG + chr3_3:68004444-68004463 Msa0466880:CDS 20.0%
!! TTCAAATTGTGATCAATATA+TGG + chr3_3:68004618-68004637 Msa0466880:intron 20.0%
!!! ATTTTGAGAAAAAAATGTCA+AGG + chr3_3:68005440-68005459 Msa0466880:intron 20.0%
!! AATTATTTATCAAACAACTG+GGG - chr3_3:68005811-68005830 None:intergenic 20.0%
!! AATATAAAATGGTCTTTATG+TGG + chr3_3:68005837-68005856 Msa0466880:three_prime_UTR 20.0%
!! ATAGTACATTATGACAAAAT+AGG - chr3_3:68006040-68006059 None:intergenic 20.0%
!! CAAATTCAAATTAATCCAAA+TGG + chr3_3:68004056-68004075 Msa0466880:exon 20.0%
!! ATGTTGTTCAAAGATAAATA+CGG + chr3_3:68004444-68004463 Msa0466880:CDS 20.0%
!! TTCAAATTGTGATCAATATA+TGG + chr3_3:68004618-68004637 Msa0466880:intron 20.0%
!!! ATTTTGAGAAAAAAATGTCA+AGG + chr3_3:68005440-68005459 Msa0466880:intron 20.0%
!! AATTATTTATCAAACAACTG+GGG - chr3_3:68005811-68005830 None:intergenic 20.0%
!! AATATAAAATGGTCTTTATG+TGG + chr3_3:68005837-68005856 Msa0466880:three_prime_UTR 20.0%
!! ATAGTACATTATGACAAAAT+AGG - chr3_3:68006040-68006059 None:intergenic 20.0%
! TTTGAATTTGAAAGGGAAAT+TGG - chr3_3:68004040-68004059 None:intergenic 25.0%
! ACAAGAAGAAAAAAGAATCT+GGG - chr3_3:68004231-68004250 None:intergenic 25.0%
! AACAAGAAGAAAAAAGAATC+TGG - chr3_3:68004232-68004251 None:intergenic 25.0%
! GATGAAATGTTATGATTACT+AGG + chr3_3:68004273-68004292 Msa0466880:intron 25.0%
!!! TAATTTTTTGTGAAGGAATG+TGG + chr3_3:68004326-68004345 Msa0466880:intron 25.0%
!! CATTGAAATTACCTTTTGAT+AGG - chr3_3:68004478-68004497 None:intergenic 25.0%
!!! ATTTTAGTAGTTACAAGTGT+TGG + chr3_3:68004560-68004579 Msa0466880:intron 25.0%
!!! TCTTTTGAAAACTCAATATC+TGG - chr3_3:68004832-68004851 None:intergenic 25.0%
! TATTGTTGCATTTGCAATTA+TGG + chr3_3:68004945-68004964 Msa0466880:intron 25.0%
!!! AGAAATTTTGATGATACAAC+TGG + chr3_3:68004986-68005005 Msa0466880:intron 25.0%
! GTGATTTAAAAAACCTTTAG+TGG - chr3_3:68005014-68005033 None:intergenic 25.0%
!!! ATAGCATTGATTGAATCAAT+TGG + chr3_3:68005035-68005054 Msa0466880:intron 25.0%
!!! TGCTGAATGTGTTATTATTT+TGG + chr3_3:68005284-68005303 Msa0466880:intron 25.0%
! ACACCATTAGAAATTTAGAA+GGG - chr3_3:68005510-68005529 None:intergenic 25.0%
!! AAATTTCTAATGGTGTGTTT+TGG + chr3_3:68005514-68005533 Msa0466880:intron 25.0%
! TTAACATGTTTACTTGATTC+TGG + chr3_3:68005862-68005881 Msa0466880:three_prime_UTR 25.0%
! ATTATGTGTGTGATATATAC+AGG + chr3_3:68006000-68006019 Msa0466880:three_prime_UTR 25.0%
! TTTGAATTTGAAAGGGAAAT+TGG - chr3_3:68004040-68004059 None:intergenic 25.0%
! ACAAGAAGAAAAAAGAATCT+GGG - chr3_3:68004231-68004250 None:intergenic 25.0%
! AACAAGAAGAAAAAAGAATC+TGG - chr3_3:68004232-68004251 None:intergenic 25.0%
! GATGAAATGTTATGATTACT+AGG + chr3_3:68004273-68004292 Msa0466880:intron 25.0%
!!! TAATTTTTTGTGAAGGAATG+TGG + chr3_3:68004326-68004345 Msa0466880:intron 25.0%
!! CATTGAAATTACCTTTTGAT+AGG - chr3_3:68004478-68004497 None:intergenic 25.0%
!!! ATTTTAGTAGTTACAAGTGT+TGG + chr3_3:68004560-68004579 Msa0466880:intron 25.0%
!!! TCTTTTGAAAACTCAATATC+TGG - chr3_3:68004832-68004851 None:intergenic 25.0%
! TATTGTTGCATTTGCAATTA+TGG + chr3_3:68004945-68004964 Msa0466880:intron 25.0%
!!! AGAAATTTTGATGATACAAC+TGG + chr3_3:68004986-68005005 Msa0466880:intron 25.0%
! GTGATTTAAAAAACCTTTAG+TGG - chr3_3:68005014-68005033 None:intergenic 25.0%
!!! ATAGCATTGATTGAATCAAT+TGG + chr3_3:68005035-68005054 Msa0466880:intron 25.0%
!!! TGCTGAATGTGTTATTATTT+TGG + chr3_3:68005284-68005303 Msa0466880:intron 25.0%
! ACACCATTAGAAATTTAGAA+GGG - chr3_3:68005510-68005529 None:intergenic 25.0%
!! AAATTTCTAATGGTGTGTTT+TGG + chr3_3:68005514-68005533 Msa0466880:intron 25.0%
! TTAACATGTTTACTTGATTC+TGG + chr3_3:68005862-68005881 Msa0466880:three_prime_UTR 25.0%
! ATTATGTGTGTGATATATAC+AGG + chr3_3:68006000-68006019 Msa0466880:three_prime_UTR 25.0%
!! ATTAAGTCCGAAGTTGATAA+CGG + chr3_3:68004186-68004205 Msa0466880:CDS 30.0%
TCTTTGAACAACATCAAATC+TGG - chr3_3:68004438-68004457 None:intergenic 30.0%
TGTTGGAGTAATCATATCAA+TGG + chr3_3:68004577-68004596 Msa0466880:intron 30.0%
TGTGATCAATATATGGTTCA+AGG + chr3_3:68004625-68004644 Msa0466880:intron 30.0%
!! CATAGATCTGGCTTTAAATT+GGG + chr3_3:68004755-68004774 Msa0466880:intron 30.0%
GAAAAAAAAGTTATGGCTCA+AGG + chr3_3:68004850-68004869 Msa0466880:intron 30.0%
AATTATGGTTGTGGTTACAT+AGG + chr3_3:68004960-68004979 Msa0466880:intron 30.0%
!!! GTTATTATTTTGGATGCAGT+TGG + chr3_3:68005294-68005313 Msa0466880:intron 30.0%
TCACCCTTCTAAATTTCTAA+TGG + chr3_3:68005504-68005523 Msa0466880:intron 30.0%
CACACCATTAGAAATTTAGA+AGG - chr3_3:68005511-68005530 None:intergenic 30.0%
TTAGTTACAGTATCAGCAAT+TGG - chr3_3:68005579-68005598 None:intergenic 30.0%
GAGAAACAAACTGAACTAAT+TGG + chr3_3:68005660-68005679 Msa0466880:CDS 30.0%
AAACAAACTGAACTAATTGG+TGG + chr3_3:68005663-68005682 Msa0466880:CDS 30.0%
AACAAACTGAACTAATTGGT+GGG + chr3_3:68005664-68005683 Msa0466880:CDS 30.0%
!! ATTAAGTCCGAAGTTGATAA+CGG + chr3_3:68004186-68004205 Msa0466880:CDS 30.0%
TCTTTGAACAACATCAAATC+TGG - chr3_3:68004438-68004457 None:intergenic 30.0%
TGTTGGAGTAATCATATCAA+TGG + chr3_3:68004577-68004596 Msa0466880:intron 30.0%
TGTGATCAATATATGGTTCA+AGG + chr3_3:68004625-68004644 Msa0466880:intron 30.0%
!! CATAGATCTGGCTTTAAATT+GGG + chr3_3:68004755-68004774 Msa0466880:intron 30.0%
GAAAAAAAAGTTATGGCTCA+AGG + chr3_3:68004850-68004869 Msa0466880:intron 30.0%
AATTATGGTTGTGGTTACAT+AGG + chr3_3:68004960-68004979 Msa0466880:intron 30.0%
!!! GTTATTATTTTGGATGCAGT+TGG + chr3_3:68005294-68005313 Msa0466880:intron 30.0%
TCACCCTTCTAAATTTCTAA+TGG + chr3_3:68005504-68005523 Msa0466880:intron 30.0%
CACACCATTAGAAATTTAGA+AGG - chr3_3:68005511-68005530 None:intergenic 30.0%
TTAGTTACAGTATCAGCAAT+TGG - chr3_3:68005579-68005598 None:intergenic 30.0%
GAGAAACAAACTGAACTAAT+TGG + chr3_3:68005660-68005679 Msa0466880:CDS 30.0%
AAACAAACTGAACTAATTGG+TGG + chr3_3:68005663-68005682 Msa0466880:CDS 30.0%
AACAAACTGAACTAATTGGT+GGG + chr3_3:68005664-68005683 Msa0466880:CDS 30.0%
CAAAGATAAATACGGTCATG+AGG + chr3_3:68004452-68004471 Msa0466880:CDS 35.0%
AGTATTAAGTCAACACCACA+AGG - chr3_3:68004669-68004688 None:intergenic 35.0%
!! GTGGTGTTGACTTAATACTT+TGG + chr3_3:68004670-68004689 Msa0466880:intron 35.0%
! CCAATTTAAAGCCAGATCTA+TGG - chr3_3:68004757-68004776 None:intergenic 35.0%
!! CCATAGATCTGGCTTTAAAT+TGG + chr3_3:68004754-68004773 Msa0466880:intron 35.0%
AAAACTCAATATCTGGCCTA+AGG - chr3_3:68004825-68004844 None:intergenic 35.0%
TGCATTTGCAATTATGGTTG+TGG + chr3_3:68004951-68004970 Msa0466880:intron 35.0%
! CTTATATGACTTTTGCTGCA+AGG + chr3_3:68005354-68005373 Msa0466880:CDS 35.0%
!!! ATGGTGTGTTTTGGTTCTTT+AGG + chr3_3:68005523-68005542 Msa0466880:intron 35.0%
ACAAACTGAACTAATTGGTG+GGG + chr3_3:68005665-68005684 Msa0466880:CDS 35.0%
ATGTGAAACGCAATTCAACA+TGG - chr3_3:68005933-68005952 None:intergenic 35.0%
AGAACTCAGAAGACTGAAAA+AGG - chr3_3:68005979-68005998 None:intergenic 35.0%
CAAAGATAAATACGGTCATG+AGG + chr3_3:68004452-68004471 Msa0466880:CDS 35.0%
AGTATTAAGTCAACACCACA+AGG - chr3_3:68004669-68004688 None:intergenic 35.0%
!! GTGGTGTTGACTTAATACTT+TGG + chr3_3:68004670-68004689 Msa0466880:intron 35.0%
! CCAATTTAAAGCCAGATCTA+TGG - chr3_3:68004757-68004776 None:intergenic 35.0%
!! CCATAGATCTGGCTTTAAAT+TGG + chr3_3:68004754-68004773 Msa0466880:intron 35.0%
AAAACTCAATATCTGGCCTA+AGG - chr3_3:68004825-68004844 None:intergenic 35.0%
TGCATTTGCAATTATGGTTG+TGG + chr3_3:68004951-68004970 Msa0466880:intron 35.0%
! CTTATATGACTTTTGCTGCA+AGG + chr3_3:68005354-68005373 Msa0466880:CDS 35.0%
!!! ATGGTGTGTTTTGGTTCTTT+AGG + chr3_3:68005523-68005542 Msa0466880:intron 35.0%
ACAAACTGAACTAATTGGTG+GGG + chr3_3:68005665-68005684 Msa0466880:CDS 35.0%
ATGTGAAACGCAATTCAACA+TGG - chr3_3:68005933-68005952 None:intergenic 35.0%
AGAACTCAGAAGACTGAAAA+AGG - chr3_3:68005979-68005998 None:intergenic 35.0%
!! TTGAGTGTTGATTGGGTTAG+TGG - chr3_3:68004005-68004024 None:intergenic 40.0%
!! AGAGGGTTTGAGTGTTGATT+GGG - chr3_3:68004012-68004031 None:intergenic 40.0%
!! AAGAGGGTTTGAGTGTTGAT+TGG - chr3_3:68004013-68004032 None:intergenic 40.0%
AAGGGAAATTGGAGAGAAGA+GGG - chr3_3:68004029-68004048 None:intergenic 40.0%
AAAGGGAAATTGGAGAGAAG+AGG - chr3_3:68004030-68004049 None:intergenic 40.0%
ATCCAAATGGCTTCTTCCTT+TGG + chr3_3:68004069-68004088 Msa0466880:exon 40.0%
GGACTTAATACGACGAAGAA+GGG - chr3_3:68004175-68004194 None:intergenic 40.0%
GGGAAATTTAATCCCGTCAT+GGG - chr3_3:68004403-68004422 None:intergenic 40.0%
AGGGAAATTTAATCCCGTCA+TGG - chr3_3:68004404-68004423 None:intergenic 40.0%
ACGGGATTAAATTTCCCTGT+TGG + chr3_3:68004406-68004425 Msa0466880:CDS 40.0%
CGGGATTAAATTTCCCTGTT+GGG + chr3_3:68004407-68004426 Msa0466880:CDS 40.0%
AATTGAACCCGAGACCTTAT+GGG - chr3_3:68004705-68004724 None:intergenic 40.0%
!! ATTCCTTCCGGTGTCAATTT+TGG + chr3_3:68004722-68004741 Msa0466880:intron 40.0%
TTTAAATTGGGCTCCACAAG+TGG + chr3_3:68004767-68004786 Msa0466880:intron 40.0%
ATTGGACTCCTCGGATTAAT+CGG + chr3_3:68004798-68004817 Msa0466880:intron 40.0%
GATACAACTGGTACCACTAA+AGG + chr3_3:68004998-68005017 Msa0466880:intron 40.0%
ATGTTACTATGTCAGTGACG+TGG + chr3_3:68005124-68005143 Msa0466880:intron 40.0%
TGGATGCAGTTGGATGTTAT+TGG + chr3_3:68005304-68005323 Msa0466880:intron 40.0%
GGATGTTATTGGTATAGACG+AGG + chr3_3:68005315-68005334 Msa0466880:CDS 40.0%
! TGGTTCTTTAGGAGAAGCTT+TGG + chr3_3:68005534-68005553 Msa0466880:intron 40.0%
CTTCTTTACCTTGAGGAAGA+CGG + chr3_3:68005635-68005654 Msa0466880:CDS 40.0%
TTCTTTACCTTGAGGAAGAC+GGG + chr3_3:68005636-68005655 Msa0466880:CDS 40.0%
CTTGACCATTCACATAGTGA+TGG - chr3_3:68005716-68005735 None:intergenic 40.0%
! TGTGAATGGTCAAGTTGTTG+TGG + chr3_3:68005722-68005741 Msa0466880:CDS 40.0%
GTCTTCGGATCTCAAAAAGT+TGG + chr3_3:68005762-68005781 Msa0466880:CDS 40.0%
TGGAAGTGATTCCCTTATTG+AGG + chr3_3:68005782-68005801 Msa0466880:CDS 40.0%
!! TTGAGTGTTGATTGGGTTAG+TGG - chr3_3:68004005-68004024 None:intergenic 40.0%
!! AGAGGGTTTGAGTGTTGATT+GGG - chr3_3:68004012-68004031 None:intergenic 40.0%
!! AAGAGGGTTTGAGTGTTGAT+TGG - chr3_3:68004013-68004032 None:intergenic 40.0%
AAGGGAAATTGGAGAGAAGA+GGG - chr3_3:68004029-68004048 None:intergenic 40.0%
AAAGGGAAATTGGAGAGAAG+AGG - chr3_3:68004030-68004049 None:intergenic 40.0%
ATCCAAATGGCTTCTTCCTT+TGG + chr3_3:68004069-68004088 Msa0466880:exon 40.0%
GGACTTAATACGACGAAGAA+GGG - chr3_3:68004175-68004194 None:intergenic 40.0%
GGGAAATTTAATCCCGTCAT+GGG - chr3_3:68004403-68004422 None:intergenic 40.0%
AGGGAAATTTAATCCCGTCA+TGG - chr3_3:68004404-68004423 None:intergenic 40.0%
ACGGGATTAAATTTCCCTGT+TGG + chr3_3:68004406-68004425 Msa0466880:CDS 40.0%
CGGGATTAAATTTCCCTGTT+GGG + chr3_3:68004407-68004426 Msa0466880:CDS 40.0%
AATTGAACCCGAGACCTTAT+GGG - chr3_3:68004705-68004724 None:intergenic 40.0%
!! ATTCCTTCCGGTGTCAATTT+TGG + chr3_3:68004722-68004741 Msa0466880:intron 40.0%
TTTAAATTGGGCTCCACAAG+TGG + chr3_3:68004767-68004786 Msa0466880:intron 40.0%
ATTGGACTCCTCGGATTAAT+CGG + chr3_3:68004798-68004817 Msa0466880:intron 40.0%
GATACAACTGGTACCACTAA+AGG + chr3_3:68004998-68005017 Msa0466880:intron 40.0%
ATGTTACTATGTCAGTGACG+TGG + chr3_3:68005124-68005143 Msa0466880:intron 40.0%
TGGATGCAGTTGGATGTTAT+TGG + chr3_3:68005304-68005323 Msa0466880:intron 40.0%
GGATGTTATTGGTATAGACG+AGG + chr3_3:68005315-68005334 Msa0466880:CDS 40.0%
! TGGTTCTTTAGGAGAAGCTT+TGG + chr3_3:68005534-68005553 Msa0466880:intron 40.0%
CTTCTTTACCTTGAGGAAGA+CGG + chr3_3:68005635-68005654 Msa0466880:CDS 40.0%
TTCTTTACCTTGAGGAAGAC+GGG + chr3_3:68005636-68005655 Msa0466880:CDS 40.0%
CTTGACCATTCACATAGTGA+TGG - chr3_3:68005716-68005735 None:intergenic 40.0%
! TGTGAATGGTCAAGTTGTTG+TGG + chr3_3:68005722-68005741 Msa0466880:CDS 40.0%
GTCTTCGGATCTCAAAAAGT+TGG + chr3_3:68005762-68005781 Msa0466880:CDS 40.0%
TGGAAGTGATTCCCTTATTG+AGG + chr3_3:68005782-68005801 Msa0466880:CDS 40.0%
!! AGTGTTGATTGGGTTAGTGG+TGG - chr3_3:68004002-68004021 None:intergenic 45.0%
CACCAAAGGAAGAAGCCATT+TGG - chr3_3:68004074-68004093 None:intergenic 45.0%
! ATGGCTTCTTCCTTTGGTGT+TGG + chr3_3:68004075-68004094 Msa0466880:CDS 45.0%
TCTCACTCTCACTCATCATC+CGG + chr3_3:68004102-68004121 Msa0466880:CDS 45.0%
!! GTCGTTTTGCCAGCAAACAT+GGG - chr3_3:68004150-68004169 None:intergenic 45.0%
!!! TGTCGTTTTGCCAGCAAACA+TGG - chr3_3:68004151-68004170 None:intergenic 45.0%
CGGACTTAATACGACGAAGA+AGG - chr3_3:68004176-68004195 None:intergenic 45.0%
GTACCTGCCGTTATCAACTT+CGG - chr3_3:68004196-68004215 None:intergenic 45.0%
AAATCTGGCAATGCCCAACA+GGG - chr3_3:68004423-68004442 None:intergenic 45.0%
! TTTGGAGTGTGATCCCCATA+AGG + chr3_3:68004688-68004707 Msa0466880:intron 45.0%
ATTGAACCCGAGACCTTATG+GGG - chr3_3:68004704-68004723 None:intergenic 45.0%
GAATTGAACCCGAGACCTTA+TGG - chr3_3:68004706-68004725 None:intergenic 45.0%
!! CTTCCGGTGTCAATTTTGGT+GGG + chr3_3:68004726-68004745 Msa0466880:intron 45.0%
TAGCCCACCAAAATTGACAC+CGG - chr3_3:68004732-68004751 None:intergenic 45.0%
TACTATGTCAGTGACGTGGT+TGG + chr3_3:68005128-68005147 Msa0466880:intron 45.0%
ACTATGTCAGTGACGTGGTT+GGG + chr3_3:68005129-68005148 Msa0466880:intron 45.0%
GGTAAAATTGTCGTCGTTGC+AGG + chr3_3:68005391-68005410 Msa0466880:CDS 45.0%
ACCTCAAGTAATCACCATCC+AGG - chr3_3:68005417-68005436 None:intergenic 45.0%
ACAGCTCGTTGTGAACTATG+CGG + chr3_3:68005603-68005622 Msa0466880:CDS 45.0%
CGTCTTCCTCAAGGTAAAGA+AGG - chr3_3:68005637-68005656 None:intergenic 45.0%
! TGGGGCTGATTTATACATGC+CGG + chr3_3:68005683-68005702 Msa0466880:CDS 45.0%
GACCATTCACATAGTGATGG+CGG - chr3_3:68005713-68005732 None:intergenic 45.0%
! GCTGTCAAGAAGTGTGTCTT+CGG + chr3_3:68005747-68005766 Msa0466880:CDS 45.0%
GTACCTGTGTTGTGTGATTC+AGG + chr3_3:68005888-68005907 Msa0466880:three_prime_UTR 45.0%
! CAGGCAGTTTGTTCAACAAC+AGG + chr3_3:68005907-68005926 Msa0466880:three_prime_UTR 45.0%
!! AGTGTTGATTGGGTTAGTGG+TGG - chr3_3:68004002-68004021 None:intergenic 45.0%
CACCAAAGGAAGAAGCCATT+TGG - chr3_3:68004074-68004093 None:intergenic 45.0%
! ATGGCTTCTTCCTTTGGTGT+TGG + chr3_3:68004075-68004094 Msa0466880:CDS 45.0%
TCTCACTCTCACTCATCATC+CGG + chr3_3:68004102-68004121 Msa0466880:CDS 45.0%
!! GTCGTTTTGCCAGCAAACAT+GGG - chr3_3:68004150-68004169 None:intergenic 45.0%
!!! TGTCGTTTTGCCAGCAAACA+TGG - chr3_3:68004151-68004170 None:intergenic 45.0%
CGGACTTAATACGACGAAGA+AGG - chr3_3:68004176-68004195 None:intergenic 45.0%
GTACCTGCCGTTATCAACTT+CGG - chr3_3:68004196-68004215 None:intergenic 45.0%
AAATCTGGCAATGCCCAACA+GGG - chr3_3:68004423-68004442 None:intergenic 45.0%
! TTTGGAGTGTGATCCCCATA+AGG + chr3_3:68004688-68004707 Msa0466880:intron 45.0%
ATTGAACCCGAGACCTTATG+GGG - chr3_3:68004704-68004723 None:intergenic 45.0%
GAATTGAACCCGAGACCTTA+TGG - chr3_3:68004706-68004725 None:intergenic 45.0%
!! CTTCCGGTGTCAATTTTGGT+GGG + chr3_3:68004726-68004745 Msa0466880:intron 45.0%
TAGCCCACCAAAATTGACAC+CGG - chr3_3:68004732-68004751 None:intergenic 45.0%
TACTATGTCAGTGACGTGGT+TGG + chr3_3:68005128-68005147 Msa0466880:intron 45.0%
ACTATGTCAGTGACGTGGTT+GGG + chr3_3:68005129-68005148 Msa0466880:intron 45.0%
GGTAAAATTGTCGTCGTTGC+AGG + chr3_3:68005391-68005410 Msa0466880:CDS 45.0%
ACCTCAAGTAATCACCATCC+AGG - chr3_3:68005417-68005436 None:intergenic 45.0%
ACAGCTCGTTGTGAACTATG+CGG + chr3_3:68005603-68005622 Msa0466880:CDS 45.0%
CGTCTTCCTCAAGGTAAAGA+AGG - chr3_3:68005637-68005656 None:intergenic 45.0%
! TGGGGCTGATTTATACATGC+CGG + chr3_3:68005683-68005702 Msa0466880:CDS 45.0%
GACCATTCACATAGTGATGG+CGG - chr3_3:68005713-68005732 None:intergenic 45.0%
! GCTGTCAAGAAGTGTGTCTT+CGG + chr3_3:68005747-68005766 Msa0466880:CDS 45.0%
GTACCTGTGTTGTGTGATTC+AGG + chr3_3:68005888-68005907 Msa0466880:three_prime_UTR 45.0%
! CAGGCAGTTTGTTCAACAAC+AGG + chr3_3:68005907-68005926 Msa0466880:three_prime_UTR 45.0%
GTGAGAAGAGCCAACACCAA+AGG - chr3_3:68004088-68004107 None:intergenic 50.0%
CACAAAGAGATGGATCTCGC+CGG - chr3_3:68004124-68004143 None:intergenic 50.0%
GGCGAGATCCATCTCTTTGT+GGG + chr3_3:68004123-68004142 Msa0466880:CDS 50.0%
ACATGGGACCCACAAAGAGA+TGG - chr3_3:68004134-68004153 None:intergenic 50.0%
TTTGTGGGTCCCATGTTTGC+TGG + chr3_3:68004138-68004157 Msa0466880:CDS 50.0%
!! AGTCCGAAGTTGATAACGGC+AGG + chr3_3:68004190-68004209 Msa0466880:CDS 50.0%
GACTCTGTTGTGACCCATGA+CGG + chr3_3:68004387-68004406 Msa0466880:CDS 50.0%
ACTCTGTTGTGACCCATGAC+GGG + chr3_3:68004388-68004407 Msa0466880:CDS 50.0%
CAAATCTGGCAATGCCCAAC+AGG - chr3_3:68004424-68004443 None:intergenic 50.0%
CGGTCATGAGGCCTATCAAA+AGG + chr3_3:68004464-68004483 Msa0466880:CDS 50.0%
TGGTTCAAGGTAACCCCACT+TGG + chr3_3:68004638-68004657 Msa0466880:intron 50.0%
GGTTCAAGGTAACCCCACTT+GGG + chr3_3:68004639-68004658 Msa0466880:intron 50.0%
ACCACAAGGTCAACCCAAGT+GGG - chr3_3:68004655-68004674 None:intergenic 50.0%
GTGTGATCCCCATAAGGTCT+CGG + chr3_3:68004694-68004713 Msa0466880:intron 50.0%
TGTGATCCCCATAAGGTCTC+GGG + chr3_3:68004695-68004714 Msa0466880:intron 50.0%
GTCTCGGGTTCAATTCCTTC+CGG + chr3_3:68004710-68004729 Msa0466880:intron 50.0%
CCACCAAAATTGACACCGGA+AGG - chr3_3:68004728-68004747 None:intergenic 50.0%
!! CCTTCCGGTGTCAATTTTGG+TGG + chr3_3:68004725-68004744 Msa0466880:intron 50.0%
AATTGGGCTCCACAAGTGGA+CGG + chr3_3:68004771-68004790 Msa0466880:intron 50.0%
CCAATCTAACCGTCCACTTG+TGG - chr3_3:68004783-68004802 None:intergenic 50.0%
CCACAAGTGGACGGTTAGAT+TGG + chr3_3:68004780-68004799 Msa0466880:intron 50.0%
GACGGTTAGATTGGACTCCT+CGG + chr3_3:68004789-68004808 Msa0466880:intron 50.0%
CCTAAGGACCGATTAATCCG+AGG - chr3_3:68004809-68004828 None:intergenic 50.0%
CCTCGGATTAATCGGTCCTT+AGG + chr3_3:68004806-68004825 Msa0466880:intron 50.0%
CTATGTCAGTGACGTGGTTG+GGG + chr3_3:68005130-68005149 Msa0466880:intron 50.0%
TGCAAGGCTGCTGATGAAGA+TGG + chr3_3:68005370-68005389 Msa0466880:CDS 50.0%
GCCTGGATGGTGATTACTTG+AGG + chr3_3:68005413-68005432 Msa0466880:CDS 50.0%
CAGCTCGTTGTGAACTATGC+GGG + chr3_3:68005604-68005623 Msa0466880:CDS 50.0%
AACGCGCCTTCTTTACCTTG+AGG + chr3_3:68005628-68005647 Msa0466880:CDS 50.0%
TTTCTCTCCCGTCTTCCTCA+AGG - chr3_3:68005646-68005665 None:intergenic 50.0%
!! ACATAGTGATGGCGGCAAAC+CGG - chr3_3:68005705-68005724 None:intergenic 50.0%
TGCCGCCATCACTATGTGAA+TGG + chr3_3:68005708-68005727 Msa0466880:CDS 50.0%
AACTGGGGCTGCCTCAATAA+GGG - chr3_3:68005796-68005815 None:intergenic 50.0%
CTGCCTGAATCACACAACAC+AGG - chr3_3:68005894-68005913 None:intergenic 50.0%
GTGAGAAGAGCCAACACCAA+AGG - chr3_3:68004088-68004107 None:intergenic 50.0%
CACAAAGAGATGGATCTCGC+CGG - chr3_3:68004124-68004143 None:intergenic 50.0%
GGCGAGATCCATCTCTTTGT+GGG + chr3_3:68004123-68004142 Msa0466880:CDS 50.0%
ACATGGGACCCACAAAGAGA+TGG - chr3_3:68004134-68004153 None:intergenic 50.0%
TTTGTGGGTCCCATGTTTGC+TGG + chr3_3:68004138-68004157 Msa0466880:CDS 50.0%
!! AGTCCGAAGTTGATAACGGC+AGG + chr3_3:68004190-68004209 Msa0466880:CDS 50.0%
GACTCTGTTGTGACCCATGA+CGG + chr3_3:68004387-68004406 Msa0466880:CDS 50.0%
ACTCTGTTGTGACCCATGAC+GGG + chr3_3:68004388-68004407 Msa0466880:CDS 50.0%
CAAATCTGGCAATGCCCAAC+AGG - chr3_3:68004424-68004443 None:intergenic 50.0%
CGGTCATGAGGCCTATCAAA+AGG + chr3_3:68004464-68004483 Msa0466880:CDS 50.0%
TGGTTCAAGGTAACCCCACT+TGG + chr3_3:68004638-68004657 Msa0466880:intron 50.0%
GGTTCAAGGTAACCCCACTT+GGG + chr3_3:68004639-68004658 Msa0466880:intron 50.0%
ACCACAAGGTCAACCCAAGT+GGG - chr3_3:68004655-68004674 None:intergenic 50.0%
GTGTGATCCCCATAAGGTCT+CGG + chr3_3:68004694-68004713 Msa0466880:intron 50.0%
TGTGATCCCCATAAGGTCTC+GGG + chr3_3:68004695-68004714 Msa0466880:intron 50.0%
GTCTCGGGTTCAATTCCTTC+CGG + chr3_3:68004710-68004729 Msa0466880:intron 50.0%
CCACCAAAATTGACACCGGA+AGG - chr3_3:68004728-68004747 None:intergenic 50.0%
!! CCTTCCGGTGTCAATTTTGG+TGG + chr3_3:68004725-68004744 Msa0466880:intron 50.0%
AATTGGGCTCCACAAGTGGA+CGG + chr3_3:68004771-68004790 Msa0466880:intron 50.0%
CCAATCTAACCGTCCACTTG+TGG - chr3_3:68004783-68004802 None:intergenic 50.0%
CCACAAGTGGACGGTTAGAT+TGG + chr3_3:68004780-68004799 Msa0466880:intron 50.0%
GACGGTTAGATTGGACTCCT+CGG + chr3_3:68004789-68004808 Msa0466880:intron 50.0%
CCTAAGGACCGATTAATCCG+AGG - chr3_3:68004809-68004828 None:intergenic 50.0%
CCTCGGATTAATCGGTCCTT+AGG + chr3_3:68004806-68004825 Msa0466880:intron 50.0%
CTATGTCAGTGACGTGGTTG+GGG + chr3_3:68005130-68005149 Msa0466880:intron 50.0%
TGCAAGGCTGCTGATGAAGA+TGG + chr3_3:68005370-68005389 Msa0466880:CDS 50.0%
GCCTGGATGGTGATTACTTG+AGG + chr3_3:68005413-68005432 Msa0466880:CDS 50.0%
CAGCTCGTTGTGAACTATGC+GGG + chr3_3:68005604-68005623 Msa0466880:CDS 50.0%
AACGCGCCTTCTTTACCTTG+AGG + chr3_3:68005628-68005647 Msa0466880:CDS 50.0%
TTTCTCTCCCGTCTTCCTCA+AGG - chr3_3:68005646-68005665 None:intergenic 50.0%
!! ACATAGTGATGGCGGCAAAC+CGG - chr3_3:68005705-68005724 None:intergenic 50.0%
TGCCGCCATCACTATGTGAA+TGG + chr3_3:68005708-68005727 Msa0466880:CDS 50.0%
AACTGGGGCTGCCTCAATAA+GGG - chr3_3:68005796-68005815 None:intergenic 50.0%
CTGCCTGAATCACACAACAC+AGG - chr3_3:68005894-68005913 None:intergenic 50.0%
CGGCGAGATCCATCTCTTTG+TGG + chr3_3:68004122-68004141 Msa0466880:CDS 55.0%
CCACAAGGTCAACCCAAGTG+GGG - chr3_3:68004654-68004673 None:intergenic 55.0%
CACCACAAGGTCAACCCAAG+TGG - chr3_3:68004656-68004675 None:intergenic 55.0%
!! GGTGGGCTAGTCCATAGATC+TGG + chr3_3:68004743-68004762 Msa0466880:intron 55.0%
AATTGTCGTCGTTGCAGGCC+TGG + chr3_3:68005396-68005415 Msa0466880:CDS 55.0%
CAACTGGGGCTGCCTCAATA+AGG - chr3_3:68005797-68005816 None:intergenic 55.0%
CGGCGAGATCCATCTCTTTG+TGG + chr3_3:68004122-68004141 Msa0466880:CDS 55.0%
CCACAAGGTCAACCCAAGTG+GGG - chr3_3:68004654-68004673 None:intergenic 55.0%
CACCACAAGGTCAACCCAAG+TGG - chr3_3:68004656-68004675 None:intergenic 55.0%
!! GGTGGGCTAGTCCATAGATC+TGG + chr3_3:68004743-68004762 Msa0466880:intron 55.0%
AATTGTCGTCGTTGCAGGCC+TGG + chr3_3:68005396-68005415 Msa0466880:CDS 55.0%
CAACTGGGGCTGCCTCAATA+AGG - chr3_3:68005797-68005816 None:intergenic 55.0%
!! CCCCACTTGGGTTGACCTTG+TGG + chr3_3:68004651-68004670 Msa0466880:intron 60.0%
!! CCCCACTTGGGTTGACCTTG+TGG + chr3_3:68004651-68004670 Msa0466880:intron 60.0%
GTCGTCGTTGCAGGCCTGGA+TGG + chr3_3:68005400-68005419 Msa0466880:CDS 65.0%
GTCGTCGTTGCAGGCCTGGA+TGG + chr3_3:68005400-68005419 Msa0466880:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 68003993 68006100 68003993 ID=Msa0466880;Name=Msa0466880
chr3_3 mRNA 68003993 68006100 68003993 ID=Msa0466880-mRNA-1;Parent=Msa0466880;Name=Msa0466880-mRNA-1;_AED=0.21;_eAED=0.21;_QI=62|1|1|1|0.75|0.6|5|279|226
chr3_3 exon 68003993 68004034 68003993 ID=Msa0466880-mRNA-1:exon:15699;Parent=Msa0466880-mRNA-1
chr3_3 exon 68004055 68004211 68004055 ID=Msa0466880-mRNA-1:exon:15700;Parent=Msa0466880-mRNA-1
chr3_3 exon 68004341 68004485 68004341 ID=Msa0466880-mRNA-1:exon:15701;Parent=Msa0466880-mRNA-1
chr3_3 exon 68005313 68005434 68005313 ID=Msa0466880-mRNA-1:exon:15702;Parent=Msa0466880-mRNA-1
chr3_3 exon 68005545 68006100 68005545 ID=Msa0466880-mRNA-1:exon:15703;Parent=Msa0466880-mRNA-1
chr3_3 five_prime_UTR 68003993 68004034 68003993 ID=Msa0466880-mRNA-1:five_prime_utr;Parent=Msa0466880-mRNA-1
chr3_3 five_prime_UTR 68004055 68004074 68004055 ID=Msa0466880-mRNA-1:five_prime_utr;Parent=Msa0466880-mRNA-1
chr3_3 CDS 68004075 68004211 68004075 ID=Msa0466880-mRNA-1:cds;Parent=Msa0466880-mRNA-1
chr3_3 CDS 68004341 68004485 68004341 ID=Msa0466880-mRNA-1:cds;Parent=Msa0466880-mRNA-1
chr3_3 CDS 68005313 68005434 68005313 ID=Msa0466880-mRNA-1:cds;Parent=Msa0466880-mRNA-1
chr3_3 CDS 68005545 68005821 68005545 ID=Msa0466880-mRNA-1:cds;Parent=Msa0466880-mRNA-1
chr3_3 three_prime_UTR 68005822 68006100 68005822 ID=Msa0466880-mRNA-1:three_prime_utr;Parent=Msa0466880-mRNA-1
Gene Sequence

>Msa0466880

ATGGCTTCTTCCTTTGGTGTTGGCTCTTCTCACTCTCACTCATCATCCGGCGAGATCCATCTCTTTGTGGGTCCCATGTTTGCTGGCAAAACGACATCCCTTCTTCGTCGTATTAAGTCCGAAGTTGATAACGGCAGGAATGTGGCGATGTTAAAATCGAGCAAAGATAATCGATATGCAGTTGACTCTGTTGTGACCCATGACGGGATTAAATTTCCCTGTTGGGCATTGCCAGATTTGATGTTGTTCAAAGATAAATACGGTCATGAGGCCTATCAAAAGTTGGATGTTATTGGTATAGACGAGGCTCAGTTTTTTGATGACTTATATGACTTTTGCTGCAAGGCTGCTGATGAAGATGGTAAAATTGTCGTCGTTGCAGGCCTGGATGGTGATTACTTGAGGAGAAGCTTTGGCTCAGTGCTTCACATAATACCAATTGCTGATACTGTAACTAAGTTAACAGCTCGTTGTGAACTATGCGGGAAACGCGCCTTCTTTACCTTGAGGAAGACGGGAGAGAAACAAACTGAACTAATTGGTGGGGCTGATTTATACATGCCGGTTTGCCGCCATCACTATGTGAATGGTCAAGTTGTTGTGGAAGCTGTCAAGAAGTGTGTCTTCGGATCTCAAAAAGTTGGAAGTGATTCCCTTATTGAGGCAGCCCCAGTTGTTTGA

Protein sequence

>Msa0466880

MASSFGVGSSHSHSSSGEIHLFVGPMFAGKTTSLLRRIKSEVDNGRNVAMLKSSKDNRYAVDSVVTHDGIKFPCWALPDLMLFKDKYGHEAYQKLDVIGIDEAQFFDDLYDFCCKAADEDGKIVVVAGLDGDYLRRSFGSVLHIIPIADTVTKLTARCELCGKRAFFTLRKTGEKQTELIGGADLYMPVCRHHYVNGQVVVEAVKKCVFGSQKVGSDSLIEAAPVV*