AlfalfaGEDB | Msa0644820

M. sativa cultivar zhongmu-4 / Msa0644820

KEGG: K14689
GO: GO:0000041 GO:0003674 GO:0005215 GO:0005385 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006812 GO:0006829 GO:0008150 GO:0008324 GO:0010035 GO:0010038 GO:0010043 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0032879 GO:0034220 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0046915 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061088 GO:0065007 GO:0065008 GO:0070838 GO:0071577 GO:0072509 GO:0072511 GO:0098655 GO:0098660 GO:0098662
PFAM: PF01545.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0644820	KYP37122.1	69.231	338	73	4	4	310	1	338	1.20e-149	433

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0644820	sp\|Q6DBM8\|MTPB_ARATH	41.962	367	145	5	5	310	14	373	3.68e-98	296

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0074200	Msa0644820	0.815332	9.761543e-52	-8.615850e-47
Msa0096450	Msa0644820	0.816163	6.371031e-52	-8.615850e-47
Msa0112750	Msa0644820	0.801071	1.070172e-48	-8.615850e-47
Msa0607540	Msa0644820	0.827499	1.512781e-54	-8.615850e-47
Msa0608620	Msa0644820	0.805100	1.571150e-49	-8.615850e-47
Msa0615310	Msa0644820	0.804506	2.090548e-49	-8.615850e-47
Msa0633060	Msa0644820	0.821218	4.538332e-53	-8.615850e-47
Msa0644820	Msa0647830	0.841944	3.495065e-58	-8.615850e-47
Msa0644820	Msa0648880	0.812009	5.258535e-51	-8.615850e-47
Msa0644820	Msa0657610	0.815370	9.570432e-52	-8.615850e-47
Msa0644820	Msa0657970	0.814294	1.657501e-51	-8.615850e-47
Msa0644820	Msa0662650	0.806287	8.851279e-50	-8.615850e-47
Msa0644820	Msa0667890	0.803783	2.956409e-49	-8.615850e-47
Msa0644820	Msa0669440	0.805560	1.258235e-49	-8.615850e-47
Msa0644820	Msa0678820	0.800932	1.142569e-48	-8.615850e-47
Msa0644820	Msa0684330	0.874187	8.216052e-68	-8.615850e-47
Msa0644820	Msa0688070	0.818699	1.710781e-52	-8.615850e-47
Msa0644820	Msa0690440	0.840982	6.260795e-58	-8.615850e-47
Msa0644820	Msa0698360	0.813382	2.632757e-51	-8.615850e-47
Msa0644820	Msa0708860	0.806621	7.527128e-50	-8.615850e-47
Msa0644820	Msa0806090	0.803052	4.189290e-49	-8.615850e-47
Msa0644820	Msa0910980	-0.804352	2.251413e-49	-8.615850e-47
Msa0644820	Msa0982270	0.808722	2.694042e-50	-8.615850e-47
Msa0644820	Msa1034150	0.805398	1.360645e-49	-8.615850e-47
Msa0644820	Msa1044420	0.800675	1.289421e-48	-8.615850e-47
Msa0644820	Msa1054410	0.805852	1.092707e-49	-8.615850e-47
Msa0644820	Msa1059570	0.800390	1.474143e-48	-8.615850e-47
Msa0644820	Msa1075220	-0.808197	3.486120e-50	-8.615850e-47
Msa0644820	Msa1082500	0.839687	1.365011e-57	-8.615850e-47
Msa0644820	Msa1217810	0.808955	2.401292e-50	-8.615850e-47
Msa0644820	Msa1224480	0.817049	4.033681e-52	-8.615850e-47
Msa0644820	Msa1279210	0.833150	6.290260e-56	-8.615850e-47
Msa0644820	Msa1305340	0.800605	1.332796e-48	-8.615850e-47
Msa0644820	Msa1322190	0.820660	6.098499e-53	-8.615850e-47
Msa0644820	Msa1327680	0.808486	3.024609e-50	-8.615850e-47
Msa0644820	Msa1384350	0.808619	2.833306e-50	-8.615850e-47
Msa0644820	Msa1392260	0.809316	2.010075e-50	-8.615850e-47
Msa0644820	Msa1393040	0.809362	1.964175e-50	-8.615850e-47
Msa0644820	Msa1425100	0.803506	3.375063e-49	-8.615850e-47
Msa0644820	Msa1429900	0.804009	2.653081e-49	-8.615850e-47
Msa0644820	Msa1451620	-0.818276	2.132522e-52	-8.615850e-47
Msa0644820	Msa1454860	0.826135	3.203126e-54	-8.615850e-47
Msa0122590	Msa0644820	0.810034	1.408397e-50	-8.615850e-47
Msa0178930	Msa0644820	0.807549	4.788510e-50	-8.615850e-47
Msa0188830	Msa0644820	0.822886	1.863086e-53	-8.615850e-47
Msa0226890	Msa0644820	0.802250	6.134115e-49	-8.615850e-47
Msa0233300	Msa0644820	0.800482	1.412053e-48	-8.615850e-47
Msa0379640	Msa0644820	0.805996	1.019078e-49	-8.615850e-47
Msa0389340	Msa0644820	0.800571	1.353839e-48	-8.615850e-47
Msa0412840	Msa0644820	0.801180	1.016690e-48	-8.615850e-47
Msa0431690	Msa0644820	0.815430	9.281812e-52	-8.615850e-47
Msa0442200	Msa0644820	0.802554	5.308780e-49	-8.615850e-47
Msa0465680	Msa0644820	-0.808787	2.608277e-50	-8.615850e-47
Msa0466120	Msa0644820	0.808506	2.995576e-50	-8.615850e-47
Msa0475490	Msa0644820	0.800390	1.473819e-48	-8.615850e-47
Msa0477130	Msa0644820	-0.843769	1.142599e-58	-8.615850e-47
Msa0243710	Msa0644820	0.801227	9.945339e-49	-8.615850e-47
Msa0315290	Msa0644820	0.806263	8.955003e-50	-8.615850e-47
Msa0319170	Msa0644820	0.800230	1.588711e-48	-8.615850e-47
Msa0484780	Msa0644820	0.826717	2.326936e-54	-8.615850e-47
Msa0512900	Msa0644820	0.817188	3.752798e-52	-8.615850e-47
Msa0536220	Msa0644820	0.841323	5.094033e-58	-8.615850e-47
Msa0540070	Msa0644820	0.804436	2.161757e-49	-8.615850e-47
Msa0553460	Msa0644820	0.832636	8.441211e-56	-8.615850e-47
Msa0555020	Msa0644820	0.830961	2.186232e-55	-8.615850e-47
Msa0561230	Msa0644820	0.814707	1.343413e-51	-8.615850e-47
Msa0579130	Msa0644820	0.811457	6.935862e-51	-8.615850e-47
Msa0599890	Msa0644820	0.800570	1.354887e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0644820	MtrunA17_Chr4g0032191	89.655	174	7	2	1	163	1	174	2.98e-104	310
Msa0644820	MtrunA17_Chr4g0032191	98.639	147	2	0	164	310	248	394	1.94e-100	300
Msa0644820	MtrunA17_Chr2g0297881	57.042	142	61	0	169	310	266	407	9.26e-49	167
Msa0644820	MtrunA17_Chr2g0297881	47.518	141	60	3	37	163	32	172	1.15e-33	127
Msa0644820	MtrunA17_Chr8g0345881	55.634	142	63	0	169	310	244	385	2.85e-47	163
Msa0644820	MtrunA17_Chr8g0345881	48.611	144	60	4	34	163	29	172	4.30e-36	133
Msa0644820	MtrunA17_Chr7g0258751	24.324	296	189	7	44	310	99	388	2.51e-15	75.9
Msa0644820	MtrunA17_Chr6g0475611	29.577	142	96	3	171	310	763	902	2.50e-12	67.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0644820	AT2G29410.1	41.962	367	145	5	5	310	14	373	3.74e-99	296
Msa0644820	AT3G61940.1	43.243	333	138	4	29	310	1	333	2.36e-89	270
Msa0644820	AT3G58810.2	43.529	340	126	5	37	310	52	391	1.36e-85	263
Msa0644820	AT3G58810.1	43.529	340	126	5	37	310	91	430	5.93e-85	262
Msa0644820	AT2G46800.5	55.634	142	63	0	169	310	256	397	2.68e-47	164
Msa0644820	AT2G46800.5	48.227	141	59	3	37	163	36	176	7.36e-37	136
Msa0644820	AT2G46800.1	55.634	142	63	0	169	310	256	397	2.68e-47	164
Msa0644820	AT2G46800.1	48.227	141	59	3	37	163	36	176	7.36e-37	136
Msa0644820	AT2G46800.3	55.634	142	63	0	169	310	256	397	2.68e-47	164
Msa0644820	AT2G46800.3	48.227	141	59	3	37	163	36	176	7.36e-37	136
Msa0644820	AT2G46800.4	55.634	142	63	0	169	310	256	397	2.68e-47	164
Msa0644820	AT2G46800.4	48.227	141	59	3	37	163	36	176	7.36e-37	136
Msa0644820	AT2G46800.2	55.634	142	63	0	169	310	256	397	2.68e-47	164
Msa0644820	AT2G46800.2	48.227	141	59	3	37	163	36	176	7.36e-37	136
Msa0644820	AT3G12100.1	26.014	296	180	9	46	310	104	391	1.81e-12	67.8

Find 85 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTGATTTCCGTCAGAAATT+AGG	0.137403	4_3:-49196888	None:intergenic
TTATATCTGTTCAGTTAATT+TGG	0.188289	4_3:+49198035	Msa0644820:CDS
CAATTCAATCTTTGTCATTT+GGG	0.210944	4_3:+49197233	Msa0644820:five_prime_UTR
TTGATTTCCGTCAGAAATTA+GGG	0.233394	4_3:-49196887	None:intergenic
CCAATTCAATCTTTGTCATT+TGG	0.238833	4_3:+49197232	Msa0644820:five_prime_UTR
ACTGATATGATTCAATCTTT+TGG	0.253584	4_3:+49198445	Msa0644820:CDS
TTTGTCTTTGTCTGTAATTT+AGG	0.256121	4_3:+49197019	Msa0644820:five_prime_UTR
ATGTTTGCAATTGCCACATT+TGG	0.260134	4_3:+49198133	Msa0644820:CDS
TTATGGTTGTTGAATTTATT+GGG	0.272631	4_3:+49197852	Msa0644820:CDS
CAGTTAATTTGGTTCATATC+TGG	0.275924	4_3:+49198046	Msa0644820:CDS
CAACGCCTCATCAATCTTTC+GGG	0.279334	4_3:+49197984	Msa0644820:CDS
GTTATGGTTGTTGAATTTAT+TGG	0.283241	4_3:+49197851	Msa0644820:CDS
CTGTTTGCAGTGTGGGCTTC+GGG	0.284180	4_3:+49197953	Msa0644820:CDS
TCTGTTTGCAGTGTGGGCTT+CGG	0.306327	4_3:+49197952	Msa0644820:CDS
TGCAGTGTGGGCTTCGGGTT+GGG	0.309326	4_3:+49197958	Msa0644820:CDS
CCAAATGACAAAGATTGAAT+TGG	0.320996	4_3:-49197232	None:intergenic
GCAACGCCTCATCAATCTTT+CGG	0.330114	4_3:+49197983	Msa0644820:CDS
AGGTTCACGATTTGCATGTT+TGG	0.334194	4_3:+49198674	Msa0644820:CDS
AGATCAACAATAAACCATTC+TGG	0.344512	4_3:-49198502	None:intergenic
TGTTTGCAATTGCCACATTT+GGG	0.358852	4_3:+49198134	Msa0644820:CDS
TTGTCTGTAATTTAGGTGAT+TGG	0.359729	4_3:+49197026	Msa0644820:five_prime_UTR
CAGGTTACATTAACATGATC+TGG	0.359813	4_3:-49196823	None:intergenic
CCACAAAGGAAAAGAGTGTT+GGG	0.362291	4_3:+49197774	Msa0644820:CDS
GGTTCACGATTTGCATGTTT+GGG	0.363513	4_3:+49198675	Msa0644820:CDS
GTATTAATAGACAAAGGTAT+AGG	0.365866	4_3:-49196793	None:intergenic
AATCTCTCTGTTTGCAGTGT+GGG	0.380756	4_3:+49197946	Msa0644820:CDS
CAATTGAGACATTGGTTGTT+CGG	0.395510	4_3:-49197097	None:intergenic
GTTTGTTCTTAATTGTATCA+TGG	0.397321	4_3:+49198156	Msa0644820:CDS
ACAAGATCGGTAGAGGAAAC+TGG	0.400121	4_3:+49197695	Msa0644820:CDS
AGAGACTCTTTCTCTGGAAA+TGG	0.406460	4_3:-49196941	None:intergenic
GATAATGATATTGATGAAGT+TGG	0.408243	4_3:-49197194	None:intergenic
TATTAATAGACAAAGGTATA+GGG	0.421876	4_3:-49196792	None:intergenic
TGATTGCTGGAGGAGTAATA+TGG	0.423479	4_3:+49198473	Msa0644820:CDS
GTTTGCAGAGACTCTTTCTC+TGG	0.428793	4_3:-49196947	None:intergenic
GATAGTGACAATGTTGTCAT+AGG	0.444055	4_3:-49197722	None:intergenic
AATGTCATTCAGCTGGAAAA+TGG	0.445646	4_3:+49198625	Msa0644820:CDS
ACCGATCTTGTATCTGAGAT+AGG	0.456563	4_3:-49197683	None:intergenic
CATTGGCAGAGTAGTACTTA+AGG	0.459268	4_3:-49198554	None:intergenic
ATTGAATTGGGAATTGAGAA+TGG	0.463289	4_3:-49197219	None:intergenic
CAAATGACAAAGATTGAATT+GGG	0.463910	4_3:-49197231	None:intergenic
TTGCAGTGTGGGCTTCGGGT+TGG	0.474328	4_3:+49197957	Msa0644820:CDS
GCTCGGTTTAATGAAGCAAA+TGG	0.475237	4_3:+49197646	Msa0644820:exon
AAATCAATGGAATTTATGCC+AGG	0.476599	4_3:-49198745	None:intergenic
GCACATTTACTTTCTGACAT+TGG	0.478131	4_3:+49197914	Msa0644820:CDS
GTACTACTCTGCCAATGCTT+AGG	0.481166	4_3:+49198560	Msa0644820:CDS
GGAAGGAGGTAGTTGCGAAA+AGG	0.481561	4_3:-49197173	None:intergenic
CATTTACTTTCTGACATTGG+TGG	0.481890	4_3:+49197917	Msa0644820:CDS
TCCACAAAGGAAAAGAGTGT+TGG	0.485875	4_3:+49197773	Msa0644820:CDS
AGGAGGTAGTTGCGAAAAGG+TGG	0.485988	4_3:-49197170	None:intergenic
TGAGATTAATGTCATTCAGC+TGG	0.490788	4_3:+49198618	Msa0644820:CDS
AAATGGTCTTAGATGTATCA+AGG	0.494424	4_3:+49198642	Msa0644820:CDS
AATCACAGAAAGTAAATCAA+TGG	0.499089	4_3:-49198758	None:intergenic
TCTGCCGATGTATGTGCAAA+AGG	0.499263	4_3:+49197058	Msa0644820:five_prime_UTR
TATGGTTGTTGAATTTATTG+GGG	0.502724	4_3:+49197853	Msa0644820:CDS
TACCTTTGTCTATTAATACA+TGG	0.510628	4_3:+49196797	Msa0644820:five_prime_UTR
CTCAGATACAAGATCGGTAG+AGG	0.511313	4_3:+49197688	Msa0644820:CDS
GTTTCTATCTTGTCATGTAG+TGG	0.519825	4_3:+49198717	Msa0644820:CDS
CATGTTTGGGCTATAACAGT+GGG	0.523467	4_3:+49198688	Msa0644820:CDS
CAATCTCTCTGTTTGCAGTG+TGG	0.530045	4_3:+49197945	Msa0644820:CDS
TAGATGTATCAAGGGAGTGC+AGG	0.541398	4_3:+49198651	Msa0644820:CDS
TGTCATGTAGTGGCTGAACC+TGG	0.544206	4_3:+49198727	Msa0644820:CDS
TTTCTTCCCCTAATTTCTGA+CGG	0.548710	4_3:+49196880	Msa0644820:five_prime_UTR
TCACATGCAAATAAGCCCCT+TGG	0.552692	4_3:-49198420	None:intergenic
GCATGTTTGGGCTATAACAG+TGG	0.554794	4_3:+49198687	Msa0644820:CDS
AGAAGACGCAATTGAGACAT+TGG	0.559094	4_3:-49197105	None:intergenic
AGTGTGGGCTTCGGGTTGGG+AGG	0.561132	4_3:+49197961	Msa0644820:CDS
GATTGCTGGAGGAGTAATAT+GGG	0.578367	4_3:+49198474	Msa0644820:CDS
ATGATATTGATGAAGTTGGA+AGG	0.584592	4_3:-49197190	None:intergenic
TTTCGGGTATAATCGACTTG+AGG	0.584985	4_3:+49198000	Msa0644820:CDS
TAATATGGGCTAAACCAGAA+TGG	0.603141	4_3:+49198488	Msa0644820:CDS
ATGTGCAAAAGGACAACATA+CGG	0.603982	4_3:+49197069	Msa0644820:five_prime_UTR
TGAATGACATTAATCTCACT+TGG	0.605618	4_3:-49198613	None:intergenic
AATGGTCTTAGATGTATCAA+GGG	0.613237	4_3:+49198643	Msa0644820:CDS
CACAAAGGAAAAGAGTGTTG+GGG	0.615604	4_3:+49197775	Msa0644820:CDS
GCCTATCTCAGATACAAGAT+CGG	0.617081	4_3:+49197682	Msa0644820:CDS
ATTAAGAACAAACCCAAATG+TGG	0.618269	4_3:-49198146	None:intergenic
ATGTATCAAGGGAGTGCAGG+AGG	0.626208	4_3:+49198654	Msa0644820:CDS
TTCCATGTATTAATAGACAA+AGG	0.627065	4_3:-49196799	None:intergenic
ATGGTTGTTGAATTTATTGG+GGG	0.645272	4_3:+49197854	Msa0644820:CDS
ACAAAGGAAAAGAGTGTTGG+GGG	0.661810	4_3:+49197776	Msa0644820:CDS
ATATTGATGAAGTTGGAAGG+AGG	0.663844	4_3:-49197187	None:intergenic
TTTGGAGTGATGATTGCTGG+AGG	0.665023	4_3:+49198463	Msa0644820:CDS
TTTGAATATAAATATCCAAG+GGG	0.673608	4_3:+49198405	Msa0644820:CDS
TTATACCCGAAAGATTGATG+AGG	0.706716	4_3:-49197989	None:intergenic
TGATTTCCGTCAGAAATTAG+GGG	0.714859	4_3:-49196886	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATAAAAAAGAATATTAAG+GGG	-	chr4_3:49197143-49197162	None:intergenic	10.0%
!!	AAGGTTTATTAATTTATTTA+TGG	-	chr4_3:49197392-49197411	None:intergenic	10.0%
!!	ATAAATAAATTAATAAACCT+TGG	+	chr4_3:49197391-49197410	Msa0644820:intron	10.0%
!!	TAATAAAAAAGAATATTAAG+GGG	-	chr4_3:49197143-49197162	None:intergenic	10.0%
!!	AAGGTTTATTAATTTATTTA+TGG	-	chr4_3:49197392-49197411	None:intergenic	10.0%
!!	ATAAATAAATTAATAAACCT+TGG	+	chr4_3:49197391-49197410	Msa0644820:intron	10.0%
!!!	TATTATTTTTTGTCTCAATT+CGG	+	chr4_3:49196915-49196934	Msa0644820:five_prime_UTR	15.0%
!!	AATAAAAAAGAATATTAAGG+GGG	-	chr4_3:49197142-49197161	None:intergenic	15.0%
!!!	TTTTGAATATAAATATCCAA+GGG	+	chr4_3:49198404-49198423	Msa0644820:CDS	15.0%
!!!	TATTATTTTTTGTCTCAATT+CGG	+	chr4_3:49196915-49196934	Msa0644820:five_prime_UTR	15.0%
!!	AATAAAAAAGAATATTAAGG+GGG	-	chr4_3:49197142-49197161	None:intergenic	15.0%
!!!	TTTTGAATATAAATATCCAA+GGG	+	chr4_3:49198404-49198423	Msa0644820:CDS	15.0%
!!!	TATTAATAGACAAAGGTATA+GGG	-	chr4_3:49196795-49196814	None:intergenic	20.0%
!!!	ATATGTTTGTGTTCTTTTAT+GGG	-	chr4_3:49196972-49196991	None:intergenic	20.0%
!!!	AATATGTTTGTGTTCTTTTA+TGG	-	chr4_3:49196973-49196992	None:intergenic	20.0%
!!	AATTTATTTATGGTTACAGT+TGG	-	chr4_3:49197382-49197401	None:intergenic	20.0%
!!	CAATAAACATAAAAATTCCA+AGG	-	chr4_3:49197411-49197430	None:intergenic	20.0%
!!	AAAAGACATTTAAGTCAATA+CGG	-	chr4_3:49197476-49197495	None:intergenic	20.0%
!!!	ACATAATTTTAAATGTTCCT+TGG	+	chr4_3:49197587-49197606	Msa0644820:intron	20.0%
!!!	AGTGGTTTATTTGTTTTTAT+AGG	+	chr4_3:49197624-49197643	Msa0644820:intron	20.0%
!!!	TTTATTTGTTTTTATAGGCT+CGG	+	chr4_3:49197629-49197648	Msa0644820:intron	20.0%
!!	TTATGGTTGTTGAATTTATT+GGG	+	chr4_3:49197852-49197871	Msa0644820:CDS	20.0%
!!	TTATATCTGTTCAGTTAATT+TGG	+	chr4_3:49198035-49198054	Msa0644820:CDS	20.0%
!!!	TTAATTGTATCATGGTTTTA+TGG	+	chr4_3:49198164-49198183	Msa0644820:intron	20.0%
!!!	GTTTTGAATATAAATATCCA+AGG	+	chr4_3:49198403-49198422	Msa0644820:CDS	20.0%
!!	TTTGAATATAAATATCCAAG+GGG	+	chr4_3:49198405-49198424	Msa0644820:CDS	20.0%
!!!	TATTAATAGACAAAGGTATA+GGG	-	chr4_3:49196795-49196814	None:intergenic	20.0%
!!!	ATATGTTTGTGTTCTTTTAT+GGG	-	chr4_3:49196972-49196991	None:intergenic	20.0%
!!!	AATATGTTTGTGTTCTTTTA+TGG	-	chr4_3:49196973-49196992	None:intergenic	20.0%
!!	AATTTATTTATGGTTACAGT+TGG	-	chr4_3:49197382-49197401	None:intergenic	20.0%
!!	CAATAAACATAAAAATTCCA+AGG	-	chr4_3:49197411-49197430	None:intergenic	20.0%
!!	AAAAGACATTTAAGTCAATA+CGG	-	chr4_3:49197476-49197495	None:intergenic	20.0%
!!!	ACATAATTTTAAATGTTCCT+TGG	+	chr4_3:49197587-49197606	Msa0644820:intron	20.0%
!!!	AGTGGTTTATTTGTTTTTAT+AGG	+	chr4_3:49197624-49197643	Msa0644820:intron	20.0%
!!!	TTTATTTGTTTTTATAGGCT+CGG	+	chr4_3:49197629-49197648	Msa0644820:intron	20.0%
!!	TTATGGTTGTTGAATTTATT+GGG	+	chr4_3:49197852-49197871	Msa0644820:CDS	20.0%
!!	TTATATCTGTTCAGTTAATT+TGG	+	chr4_3:49198035-49198054	Msa0644820:CDS	20.0%
!!!	TTAATTGTATCATGGTTTTA+TGG	+	chr4_3:49198164-49198183	Msa0644820:intron	20.0%
!!!	GTTTTGAATATAAATATCCA+AGG	+	chr4_3:49198403-49198422	Msa0644820:CDS	20.0%
!!	TTTGAATATAAATATCCAAG+GGG	+	chr4_3:49198405-49198424	Msa0644820:CDS	20.0%
!!	GTATTAATAGACAAAGGTAT+AGG	-	chr4_3:49196796-49196815	None:intergenic	25.0%
!	TACCTTTGTCTATTAATACA+TGG	+	chr4_3:49196797-49196816	Msa0644820:five_prime_UTR	25.0%
!	TTCCATGTATTAATAGACAA+AGG	-	chr4_3:49196802-49196821	None:intergenic	25.0%
!	TTTGTCTTTGTCTGTAATTT+AGG	+	chr4_3:49197019-49197038	Msa0644820:five_prime_UTR	25.0%
!	GATAATGATATTGATGAAGT+TGG	-	chr4_3:49197197-49197216	None:intergenic	25.0%
!	CAAATGACAAAGATTGAATT+GGG	-	chr4_3:49197234-49197253	None:intergenic	25.0%
!!	CAATTCAATCTTTGTCATTT+GGG	+	chr4_3:49197233-49197252	Msa0644820:five_prime_UTR	25.0%
!	TATTGTATGTACATTTCTTG+AGG	+	chr4_3:49197426-49197445	Msa0644820:intron	25.0%
!	AAAGACATTTAAGTCAATAC+GGG	-	chr4_3:49197475-49197494	None:intergenic	25.0%
!	TTTCAATTCAAACTAAAGCT+AGG	-	chr4_3:49197517-49197536	None:intergenic	25.0%
!	TATGTATCAGAAGAAAAAAC+AGG	-	chr4_3:49197572-49197591	None:intergenic	25.0%
!!	AGTTTTCTATGCTATTGTTA+TGG	+	chr4_3:49197835-49197854	Msa0644820:CDS	25.0%
!	GTTATGGTTGTTGAATTTAT+TGG	+	chr4_3:49197851-49197870	Msa0644820:CDS	25.0%
!	TATGGTTGTTGAATTTATTG+GGG	+	chr4_3:49197853-49197872	Msa0644820:CDS	25.0%
!!	TTTTTGATATATGAAGCAGT+AGG	+	chr4_3:49198070-49198089	Msa0644820:intron	25.0%
!	TATAAAAACGATAGAGTGAA+TGG	+	chr4_3:49198103-49198122	Msa0644820:CDS	25.0%
!	GTTTGTTCTTAATTGTATCA+TGG	+	chr4_3:49198156-49198175	Msa0644820:CDS	25.0%
!!	ACTGATATGATTCAATCTTT+TGG	+	chr4_3:49198445-49198464	Msa0644820:CDS	25.0%
!!!	GAATATTTTTGGCATTCTAA+TGG	+	chr4_3:49198582-49198601	Msa0644820:CDS	25.0%
!	AATCACAGAAAGTAAATCAA+TGG	-	chr4_3:49198761-49198780	None:intergenic	25.0%
!!	GTATTAATAGACAAAGGTAT+AGG	-	chr4_3:49196796-49196815	None:intergenic	25.0%
!	TACCTTTGTCTATTAATACA+TGG	+	chr4_3:49196797-49196816	Msa0644820:five_prime_UTR	25.0%
!	TTCCATGTATTAATAGACAA+AGG	-	chr4_3:49196802-49196821	None:intergenic	25.0%
!	TTTGTCTTTGTCTGTAATTT+AGG	+	chr4_3:49197019-49197038	Msa0644820:five_prime_UTR	25.0%
!	GATAATGATATTGATGAAGT+TGG	-	chr4_3:49197197-49197216	None:intergenic	25.0%
!	CAAATGACAAAGATTGAATT+GGG	-	chr4_3:49197234-49197253	None:intergenic	25.0%
!!	CAATTCAATCTTTGTCATTT+GGG	+	chr4_3:49197233-49197252	Msa0644820:five_prime_UTR	25.0%
!	TATTGTATGTACATTTCTTG+AGG	+	chr4_3:49197426-49197445	Msa0644820:intron	25.0%
!	AAAGACATTTAAGTCAATAC+GGG	-	chr4_3:49197475-49197494	None:intergenic	25.0%
!	TTTCAATTCAAACTAAAGCT+AGG	-	chr4_3:49197517-49197536	None:intergenic	25.0%
!	TATGTATCAGAAGAAAAAAC+AGG	-	chr4_3:49197572-49197591	None:intergenic	25.0%
!!	AGTTTTCTATGCTATTGTTA+TGG	+	chr4_3:49197835-49197854	Msa0644820:CDS	25.0%
!	GTTATGGTTGTTGAATTTAT+TGG	+	chr4_3:49197851-49197870	Msa0644820:CDS	25.0%
!	TATGGTTGTTGAATTTATTG+GGG	+	chr4_3:49197853-49197872	Msa0644820:CDS	25.0%
!!	TTTTTGATATATGAAGCAGT+AGG	+	chr4_3:49198070-49198089	Msa0644820:intron	25.0%
!	TATAAAAACGATAGAGTGAA+TGG	+	chr4_3:49198103-49198122	Msa0644820:CDS	25.0%
!	GTTTGTTCTTAATTGTATCA+TGG	+	chr4_3:49198156-49198175	Msa0644820:CDS	25.0%
!!	ACTGATATGATTCAATCTTT+TGG	+	chr4_3:49198445-49198464	Msa0644820:CDS	25.0%
!!!	GAATATTTTTGGCATTCTAA+TGG	+	chr4_3:49198582-49198601	Msa0644820:CDS	25.0%
!	AATCACAGAAAGTAAATCAA+TGG	-	chr4_3:49198761-49198780	None:intergenic	25.0%
!!	TTTTCTGGTACAACAATTTC+AGG	-	chr4_3:49196845-49196864	None:intergenic	30.0%
!!!	AAAAGAGCTTCTAGTTTTTC+TGG	-	chr4_3:49196860-49196879	None:intergenic	30.0%
	TTGATTTCCGTCAGAAATTA+GGG	-	chr4_3:49196890-49196909	None:intergenic	30.0%
!	ATTGATTTCCGTCAGAAATT+AGG	-	chr4_3:49196891-49196910	None:intergenic	30.0%
	TTGTCTGTAATTTAGGTGAT+TGG	+	chr4_3:49197026-49197045	Msa0644820:five_prime_UTR	30.0%
	ATGATATTGATGAAGTTGGA+AGG	-	chr4_3:49197193-49197212	None:intergenic	30.0%
	ATTGAATTGGGAATTGAGAA+TGG	-	chr4_3:49197222-49197241	None:intergenic	30.0%
	CCAAATGACAAAGATTGAAT+TGG	-	chr4_3:49197235-49197254	None:intergenic	30.0%
	CCAATTCAATCTTTGTCATT+TGG	+	chr4_3:49197232-49197251	Msa0644820:five_prime_UTR	30.0%
!	GTTATATTCTTCTCTTTTGC+TGG	+	chr4_3:49197264-49197283	Msa0644820:five_prime_UTR	30.0%
	AGAAAAAACAGGCAAATGTT+TGG	-	chr4_3:49197561-49197580	None:intergenic	30.0%
	ATGGTTGTTGAATTTATTGG+GGG	+	chr4_3:49197854-49197873	Msa0644820:CDS	30.0%
!!!	TATAATCGACTTGAGGTTTT+AGG	+	chr4_3:49198007-49198026	Msa0644820:CDS	30.0%
!	CAGTTAATTTGGTTCATATC+TGG	+	chr4_3:49198046-49198065	Msa0644820:CDS	30.0%
	ATTAAGAACAAACCCAAATG+TGG	-	chr4_3:49198149-49198168	None:intergenic	30.0%
	ACTACCTAAAATAACTGATG+AGG	+	chr4_3:49198339-49198358	Msa0644820:intron	30.0%
!!	TTCTCCTCATCAGTTATTTT+AGG	-	chr4_3:49198346-49198365	None:intergenic	30.0%
	AGATCAACAATAAACCATTC+TGG	-	chr4_3:49198505-49198524	None:intergenic	30.0%
	CCAAAAATATTCCTAAGCAT+TGG	-	chr4_3:49198574-49198593	None:intergenic	30.0%
!	CCAATGCTTAGGAATATTTT+TGG	+	chr4_3:49198571-49198590	Msa0644820:CDS	30.0%
	TGAATGACATTAATCTCACT+TGG	-	chr4_3:49198616-49198635	None:intergenic	30.0%
!	AAATGGTCTTAGATGTATCA+AGG	+	chr4_3:49198642-49198661	Msa0644820:CDS	30.0%
!	AATGGTCTTAGATGTATCAA+GGG	+	chr4_3:49198643-49198662	Msa0644820:CDS	30.0%
	AAATCAATGGAATTTATGCC+AGG	-	chr4_3:49198748-49198767	None:intergenic	30.0%
!!	TTTTCTGGTACAACAATTTC+AGG	-	chr4_3:49196845-49196864	None:intergenic	30.0%
!!!	AAAAGAGCTTCTAGTTTTTC+TGG	-	chr4_3:49196860-49196879	None:intergenic	30.0%
	TTGATTTCCGTCAGAAATTA+GGG	-	chr4_3:49196890-49196909	None:intergenic	30.0%
!	ATTGATTTCCGTCAGAAATT+AGG	-	chr4_3:49196891-49196910	None:intergenic	30.0%
	TTGTCTGTAATTTAGGTGAT+TGG	+	chr4_3:49197026-49197045	Msa0644820:five_prime_UTR	30.0%
	ATGATATTGATGAAGTTGGA+AGG	-	chr4_3:49197193-49197212	None:intergenic	30.0%
	ATTGAATTGGGAATTGAGAA+TGG	-	chr4_3:49197222-49197241	None:intergenic	30.0%
	CCAAATGACAAAGATTGAAT+TGG	-	chr4_3:49197235-49197254	None:intergenic	30.0%
	CCAATTCAATCTTTGTCATT+TGG	+	chr4_3:49197232-49197251	Msa0644820:five_prime_UTR	30.0%
!	GTTATATTCTTCTCTTTTGC+TGG	+	chr4_3:49197264-49197283	Msa0644820:five_prime_UTR	30.0%
	AGAAAAAACAGGCAAATGTT+TGG	-	chr4_3:49197561-49197580	None:intergenic	30.0%
	ATGGTTGTTGAATTTATTGG+GGG	+	chr4_3:49197854-49197873	Msa0644820:CDS	30.0%
!!!	TATAATCGACTTGAGGTTTT+AGG	+	chr4_3:49198007-49198026	Msa0644820:CDS	30.0%
!	CAGTTAATTTGGTTCATATC+TGG	+	chr4_3:49198046-49198065	Msa0644820:CDS	30.0%
	ATTAAGAACAAACCCAAATG+TGG	-	chr4_3:49198149-49198168	None:intergenic	30.0%
	ACTACCTAAAATAACTGATG+AGG	+	chr4_3:49198339-49198358	Msa0644820:intron	30.0%
!!	TTCTCCTCATCAGTTATTTT+AGG	-	chr4_3:49198346-49198365	None:intergenic	30.0%
	AGATCAACAATAAACCATTC+TGG	-	chr4_3:49198505-49198524	None:intergenic	30.0%
	CCAAAAATATTCCTAAGCAT+TGG	-	chr4_3:49198574-49198593	None:intergenic	30.0%
!	CCAATGCTTAGGAATATTTT+TGG	+	chr4_3:49198571-49198590	Msa0644820:CDS	30.0%
	TGAATGACATTAATCTCACT+TGG	-	chr4_3:49198616-49198635	None:intergenic	30.0%
!	AAATGGTCTTAGATGTATCA+AGG	+	chr4_3:49198642-49198661	Msa0644820:CDS	30.0%
!	AATGGTCTTAGATGTATCAA+GGG	+	chr4_3:49198643-49198662	Msa0644820:CDS	30.0%
	AAATCAATGGAATTTATGCC+AGG	-	chr4_3:49198748-49198767	None:intergenic	30.0%
	CAGGTTACATTAACATGATC+TGG	-	chr4_3:49196826-49196845	None:intergenic	35.0%
	TTTCTTCCCCTAATTTCTGA+CGG	+	chr4_3:49196880-49196899	Msa0644820:five_prime_UTR	35.0%
	TGATTTCCGTCAGAAATTAG+GGG	-	chr4_3:49196889-49196908	None:intergenic	35.0%
!	TTGTCCTTTTGCACATACAT+CGG	-	chr4_3:49197065-49197084	None:intergenic	35.0%
	ATGTGCAAAAGGACAACATA+CGG	+	chr4_3:49197069-49197088	Msa0644820:five_prime_UTR	35.0%
!	CAATTGAGACATTGGTTGTT+CGG	-	chr4_3:49197100-49197119	None:intergenic	35.0%
	ATATTGATGAAGTTGGAAGG+AGG	-	chr4_3:49197190-49197209	None:intergenic	35.0%
	ACATTTAAGTCAATACGGGT+AGG	-	chr4_3:49197471-49197490	None:intergenic	35.0%
	GATAGTGACAATGTTGTCAT+AGG	-	chr4_3:49197725-49197744	None:intergenic	35.0%
!!!	TGTTTGTCGTTTTTCCACAA+AGG	+	chr4_3:49197760-49197779	Msa0644820:CDS	35.0%
	GCACATTTACTTTCTGACAT+TGG	+	chr4_3:49197914-49197933	Msa0644820:CDS	35.0%
	CATTTACTTTCTGACATTGG+TGG	+	chr4_3:49197917-49197936	Msa0644820:CDS	35.0%
	TTATACCCGAAAGATTGATG+AGG	-	chr4_3:49197992-49198011	None:intergenic	35.0%
	ATGTTTGCAATTGCCACATT+TGG	+	chr4_3:49198133-49198152	Msa0644820:CDS	35.0%
	TGTTTGCAATTGCCACATTT+GGG	+	chr4_3:49198134-49198153	Msa0644820:CDS	35.0%
!!!	TGTATCATGGTTTTATGGCT+TGG	+	chr4_3:49198169-49198188	Msa0644820:intron	35.0%
!	CATGATCATCATCATGGTTT+TGG	+	chr4_3:49198193-49198212	Msa0644820:intron	35.0%
	AACCTTACCATGCTTTCAAA+TGG	+	chr4_3:49198364-49198383	Msa0644820:intron	35.0%
!	TACCATTTGAAAGCATGGTA+AGG	-	chr4_3:49198369-49198388	None:intergenic	35.0%
	CTTCTTACCATTTGAAAGCA+TGG	-	chr4_3:49198374-49198393	None:intergenic	35.0%
!	TAATATGGGCTAAACCAGAA+TGG	+	chr4_3:49198488-49198507	Msa0644820:CDS	35.0%
	TGAGATTAATGTCATTCAGC+TGG	+	chr4_3:49198618-49198637	Msa0644820:CDS	35.0%
	AATGTCATTCAGCTGGAAAA+TGG	+	chr4_3:49198625-49198644	Msa0644820:CDS	35.0%
	GTTTCTATCTTGTCATGTAG+TGG	+	chr4_3:49198717-49198736	Msa0644820:CDS	35.0%
	CAGGTTACATTAACATGATC+TGG	-	chr4_3:49196826-49196845	None:intergenic	35.0%
	TTTCTTCCCCTAATTTCTGA+CGG	+	chr4_3:49196880-49196899	Msa0644820:five_prime_UTR	35.0%
	TGATTTCCGTCAGAAATTAG+GGG	-	chr4_3:49196889-49196908	None:intergenic	35.0%
!	TTGTCCTTTTGCACATACAT+CGG	-	chr4_3:49197065-49197084	None:intergenic	35.0%
	ATGTGCAAAAGGACAACATA+CGG	+	chr4_3:49197069-49197088	Msa0644820:five_prime_UTR	35.0%
!	CAATTGAGACATTGGTTGTT+CGG	-	chr4_3:49197100-49197119	None:intergenic	35.0%
	ATATTGATGAAGTTGGAAGG+AGG	-	chr4_3:49197190-49197209	None:intergenic	35.0%
	ACATTTAAGTCAATACGGGT+AGG	-	chr4_3:49197471-49197490	None:intergenic	35.0%
	GATAGTGACAATGTTGTCAT+AGG	-	chr4_3:49197725-49197744	None:intergenic	35.0%
!!!	TGTTTGTCGTTTTTCCACAA+AGG	+	chr4_3:49197760-49197779	Msa0644820:CDS	35.0%
	GCACATTTACTTTCTGACAT+TGG	+	chr4_3:49197914-49197933	Msa0644820:CDS	35.0%
	CATTTACTTTCTGACATTGG+TGG	+	chr4_3:49197917-49197936	Msa0644820:CDS	35.0%
	TTATACCCGAAAGATTGATG+AGG	-	chr4_3:49197992-49198011	None:intergenic	35.0%
	ATGTTTGCAATTGCCACATT+TGG	+	chr4_3:49198133-49198152	Msa0644820:CDS	35.0%
	TGTTTGCAATTGCCACATTT+GGG	+	chr4_3:49198134-49198153	Msa0644820:CDS	35.0%
!!!	TGTATCATGGTTTTATGGCT+TGG	+	chr4_3:49198169-49198188	Msa0644820:intron	35.0%
!	CATGATCATCATCATGGTTT+TGG	+	chr4_3:49198193-49198212	Msa0644820:intron	35.0%
	AACCTTACCATGCTTTCAAA+TGG	+	chr4_3:49198364-49198383	Msa0644820:intron	35.0%
!	TACCATTTGAAAGCATGGTA+AGG	-	chr4_3:49198369-49198388	None:intergenic	35.0%
	CTTCTTACCATTTGAAAGCA+TGG	-	chr4_3:49198374-49198393	None:intergenic	35.0%
!	TAATATGGGCTAAACCAGAA+TGG	+	chr4_3:49198488-49198507	Msa0644820:CDS	35.0%
	TGAGATTAATGTCATTCAGC+TGG	+	chr4_3:49198618-49198637	Msa0644820:CDS	35.0%
	AATGTCATTCAGCTGGAAAA+TGG	+	chr4_3:49198625-49198644	Msa0644820:CDS	35.0%
	GTTTCTATCTTGTCATGTAG+TGG	+	chr4_3:49198717-49198736	Msa0644820:CDS	35.0%
!	AGAGACTCTTTCTCTGGAAA+TGG	-	chr4_3:49196944-49196963	None:intergenic	40.0%
	AGAAGACGCAATTGAGACAT+TGG	-	chr4_3:49197108-49197127	None:intergenic	40.0%
	ACTCAGAAAAGTCATCTCCA+AGG	-	chr4_3:49197607-49197626	None:intergenic	40.0%
!	TTGGAGATGACTTTTCTGAG+TGG	+	chr4_3:49197606-49197625	Msa0644820:intron	40.0%
	GCTCGGTTTAATGAAGCAAA+TGG	+	chr4_3:49197646-49197665	Msa0644820:exon	40.0%
	GCCTATCTCAGATACAAGAT+CGG	+	chr4_3:49197682-49197701	Msa0644820:CDS	40.0%
!	ACCGATCTTGTATCTGAGAT+AGG	-	chr4_3:49197686-49197705	None:intergenic	40.0%
!	ACAAACAGAATTTTTGCGCG+AGG	-	chr4_3:49197747-49197766	None:intergenic	40.0%
!	TCCACAAAGGAAAAGAGTGT+TGG	+	chr4_3:49197773-49197792	Msa0644820:CDS	40.0%
!!	CCACAAAGGAAAAGAGTGTT+GGG	+	chr4_3:49197774-49197793	Msa0644820:CDS	40.0%
!!	CACAAAGGAAAAGAGTGTTG+GGG	+	chr4_3:49197775-49197794	Msa0644820:CDS	40.0%
!!	ACAAAGGAAAAGAGTGTTGG+GGG	+	chr4_3:49197776-49197795	Msa0644820:CDS	40.0%
	TGTTGGGGGATCAAATGAAT+CGG	+	chr4_3:49197790-49197809	Msa0644820:CDS	40.0%
	AATCTCTCTGTTTGCAGTGT+GGG	+	chr4_3:49197946-49197965	Msa0644820:CDS	40.0%
!!	TTTCGGGTATAATCGACTTG+AGG	+	chr4_3:49198000-49198019	Msa0644820:CDS	40.0%
	CTTGGTCATGATCATCATCA+TGG	+	chr4_3:49198187-49198206	Msa0644820:intron	40.0%
	CATAGTCATCATCAATGCCA+TGG	+	chr4_3:49198289-49198308	Msa0644820:intron	40.0%
	TCATCATCAATGCCATGGAT+CGG	+	chr4_3:49198294-49198313	Msa0644820:intron	40.0%
	ATGGATCGGATCATGATCAT+GGG	+	chr4_3:49198308-49198327	Msa0644820:intron	40.0%
!!!	TCTTTTGGAGTGATGATTGC+TGG	+	chr4_3:49198460-49198479	Msa0644820:CDS	40.0%
	TGATTGCTGGAGGAGTAATA+TGG	+	chr4_3:49198473-49198492	Msa0644820:CDS	40.0%
	GATTGCTGGAGGAGTAATAT+GGG	+	chr4_3:49198474-49198493	Msa0644820:CDS	40.0%
	CATTGGCAGAGTAGTACTTA+AGG	-	chr4_3:49198557-49198576	None:intergenic	40.0%
	AGGTTCACGATTTGCATGTT+TGG	+	chr4_3:49198674-49198693	Msa0644820:CDS	40.0%
	GGTTCACGATTTGCATGTTT+GGG	+	chr4_3:49198675-49198694	Msa0644820:CDS	40.0%
	CATGTTTGGGCTATAACAGT+GGG	+	chr4_3:49198688-49198707	Msa0644820:CDS	40.0%
!	AGAGACTCTTTCTCTGGAAA+TGG	-	chr4_3:49196944-49196963	None:intergenic	40.0%
	AGAAGACGCAATTGAGACAT+TGG	-	chr4_3:49197108-49197127	None:intergenic	40.0%
	ACTCAGAAAAGTCATCTCCA+AGG	-	chr4_3:49197607-49197626	None:intergenic	40.0%
!	TTGGAGATGACTTTTCTGAG+TGG	+	chr4_3:49197606-49197625	Msa0644820:intron	40.0%
	GCTCGGTTTAATGAAGCAAA+TGG	+	chr4_3:49197646-49197665	Msa0644820:exon	40.0%
	GCCTATCTCAGATACAAGAT+CGG	+	chr4_3:49197682-49197701	Msa0644820:CDS	40.0%
!	ACCGATCTTGTATCTGAGAT+AGG	-	chr4_3:49197686-49197705	None:intergenic	40.0%
!	ACAAACAGAATTTTTGCGCG+AGG	-	chr4_3:49197747-49197766	None:intergenic	40.0%
!	TCCACAAAGGAAAAGAGTGT+TGG	+	chr4_3:49197773-49197792	Msa0644820:CDS	40.0%
!!	CCACAAAGGAAAAGAGTGTT+GGG	+	chr4_3:49197774-49197793	Msa0644820:CDS	40.0%
!!	CACAAAGGAAAAGAGTGTTG+GGG	+	chr4_3:49197775-49197794	Msa0644820:CDS	40.0%
!!	ACAAAGGAAAAGAGTGTTGG+GGG	+	chr4_3:49197776-49197795	Msa0644820:CDS	40.0%
	TGTTGGGGGATCAAATGAAT+CGG	+	chr4_3:49197790-49197809	Msa0644820:CDS	40.0%
	AATCTCTCTGTTTGCAGTGT+GGG	+	chr4_3:49197946-49197965	Msa0644820:CDS	40.0%
!!	TTTCGGGTATAATCGACTTG+AGG	+	chr4_3:49198000-49198019	Msa0644820:CDS	40.0%
	CTTGGTCATGATCATCATCA+TGG	+	chr4_3:49198187-49198206	Msa0644820:intron	40.0%
	CATAGTCATCATCAATGCCA+TGG	+	chr4_3:49198289-49198308	Msa0644820:intron	40.0%
	TCATCATCAATGCCATGGAT+CGG	+	chr4_3:49198294-49198313	Msa0644820:intron	40.0%
	ATGGATCGGATCATGATCAT+GGG	+	chr4_3:49198308-49198327	Msa0644820:intron	40.0%
!!!	TCTTTTGGAGTGATGATTGC+TGG	+	chr4_3:49198460-49198479	Msa0644820:CDS	40.0%
	TGATTGCTGGAGGAGTAATA+TGG	+	chr4_3:49198473-49198492	Msa0644820:CDS	40.0%
	GATTGCTGGAGGAGTAATAT+GGG	+	chr4_3:49198474-49198493	Msa0644820:CDS	40.0%
	CATTGGCAGAGTAGTACTTA+AGG	-	chr4_3:49198557-49198576	None:intergenic	40.0%
	AGGTTCACGATTTGCATGTT+TGG	+	chr4_3:49198674-49198693	Msa0644820:CDS	40.0%
	GGTTCACGATTTGCATGTTT+GGG	+	chr4_3:49198675-49198694	Msa0644820:CDS	40.0%
	CATGTTTGGGCTATAACAGT+GGG	+	chr4_3:49198688-49198707	Msa0644820:CDS	40.0%
	GTTTGCAGAGACTCTTTCTC+TGG	-	chr4_3:49196950-49196969	None:intergenic	45.0%
	TCTGCCGATGTATGTGCAAA+AGG	+	chr4_3:49197058-49197077	Msa0644820:five_prime_UTR	45.0%
	CTCAGATACAAGATCGGTAG+AGG	+	chr4_3:49197688-49197707	Msa0644820:CDS	45.0%
	ACAAGATCGGTAGAGGAAAC+TGG	+	chr4_3:49197695-49197714	Msa0644820:CDS	45.0%
!	CCCAACACTCTTTTCCTTTG+TGG	-	chr4_3:49197777-49197796	None:intergenic	45.0%
	CAATCTCTCTGTTTGCAGTG+TGG	+	chr4_3:49197945-49197964	Msa0644820:CDS	45.0%
	GCAACGCCTCATCAATCTTT+CGG	+	chr4_3:49197983-49198002	Msa0644820:CDS	45.0%
	CAACGCCTCATCAATCTTTC+GGG	+	chr4_3:49197984-49198003	Msa0644820:CDS	45.0%
!!!	TCATCATGGTTTTGGAGCCT+CGG	+	chr4_3:49198201-49198220	Msa0644820:intron	45.0%
	ATGATCATGACCATGATCCG+AGG	-	chr4_3:49198221-49198240	None:intergenic	45.0%
	TCGGATCATGGTCATGATCA+TGG	+	chr4_3:49198220-49198239	Msa0644820:intron	45.0%
	CGGATCATGGTCATGATCAT+GGG	+	chr4_3:49198221-49198240	Msa0644820:intron	45.0%
	GGTCATCATCATCGTCATCA+TGG	+	chr4_3:49198259-49198278	Msa0644820:intron	45.0%
	CATGATCATGATCCGATCCA+TGG	-	chr4_3:49198309-49198328	None:intergenic	45.0%
	CATGGATCGGATCATGATCA+TGG	+	chr4_3:49198307-49198326	Msa0644820:intron	45.0%
	ATCGGATCATGATCATGGGA+TGG	+	chr4_3:49198312-49198331	Msa0644820:intron	45.0%
	TCACATGCAAATAAGCCCCT+TGG	-	chr4_3:49198423-49198442	None:intergenic	45.0%
!	TTTGGAGTGATGATTGCTGG+AGG	+	chr4_3:49198463-49198482	Msa0644820:CDS	45.0%
	GTACTACTCTGCCAATGCTT+AGG	+	chr4_3:49198560-49198579	Msa0644820:CDS	45.0%
!	TAGATGTATCAAGGGAGTGC+AGG	+	chr4_3:49198651-49198670	Msa0644820:CDS	45.0%
	GCATGTTTGGGCTATAACAG+TGG	+	chr4_3:49198687-49198706	Msa0644820:CDS	45.0%
	GTTTGCAGAGACTCTTTCTC+TGG	-	chr4_3:49196950-49196969	None:intergenic	45.0%
	TCTGCCGATGTATGTGCAAA+AGG	+	chr4_3:49197058-49197077	Msa0644820:five_prime_UTR	45.0%
	CTCAGATACAAGATCGGTAG+AGG	+	chr4_3:49197688-49197707	Msa0644820:CDS	45.0%
	ACAAGATCGGTAGAGGAAAC+TGG	+	chr4_3:49197695-49197714	Msa0644820:CDS	45.0%
!	CCCAACACTCTTTTCCTTTG+TGG	-	chr4_3:49197777-49197796	None:intergenic	45.0%
	CAATCTCTCTGTTTGCAGTG+TGG	+	chr4_3:49197945-49197964	Msa0644820:CDS	45.0%
	GCAACGCCTCATCAATCTTT+CGG	+	chr4_3:49197983-49198002	Msa0644820:CDS	45.0%
	CAACGCCTCATCAATCTTTC+GGG	+	chr4_3:49197984-49198003	Msa0644820:CDS	45.0%
!!!	TCATCATGGTTTTGGAGCCT+CGG	+	chr4_3:49198201-49198220	Msa0644820:intron	45.0%
	ATGATCATGACCATGATCCG+AGG	-	chr4_3:49198221-49198240	None:intergenic	45.0%
	TCGGATCATGGTCATGATCA+TGG	+	chr4_3:49198220-49198239	Msa0644820:intron	45.0%
	CGGATCATGGTCATGATCAT+GGG	+	chr4_3:49198221-49198240	Msa0644820:intron	45.0%
	GGTCATCATCATCGTCATCA+TGG	+	chr4_3:49198259-49198278	Msa0644820:intron	45.0%
	CATGATCATGATCCGATCCA+TGG	-	chr4_3:49198309-49198328	None:intergenic	45.0%
	CATGGATCGGATCATGATCA+TGG	+	chr4_3:49198307-49198326	Msa0644820:intron	45.0%
	ATCGGATCATGATCATGGGA+TGG	+	chr4_3:49198312-49198331	Msa0644820:intron	45.0%
	TCACATGCAAATAAGCCCCT+TGG	-	chr4_3:49198423-49198442	None:intergenic	45.0%
!	TTTGGAGTGATGATTGCTGG+AGG	+	chr4_3:49198463-49198482	Msa0644820:CDS	45.0%
	GTACTACTCTGCCAATGCTT+AGG	+	chr4_3:49198560-49198579	Msa0644820:CDS	45.0%
!	TAGATGTATCAAGGGAGTGC+AGG	+	chr4_3:49198651-49198670	Msa0644820:CDS	45.0%
	GCATGTTTGGGCTATAACAG+TGG	+	chr4_3:49198687-49198706	Msa0644820:CDS	45.0%
!!	ATAATAAAAAAGAATATTAA+GGG	-	chr4_3:49197144-49197163	None:intergenic	5.0%
!!	AATAATAAAAAAGAATATTA+AGG	-	chr4_3:49197145-49197164	None:intergenic	5.0%
!!	ATAATAAAAAAGAATATTAA+GGG	-	chr4_3:49197144-49197163	None:intergenic	5.0%
!!	AATAATAAAAAAGAATATTA+AGG	-	chr4_3:49197145-49197164	None:intergenic	5.0%
	AGGAGGTAGTTGCGAAAAGG+TGG	-	chr4_3:49197173-49197192	None:intergenic	50.0%
	GGAAGGAGGTAGTTGCGAAA+AGG	-	chr4_3:49197176-49197195	None:intergenic	50.0%
	TCTGTTTGCAGTGTGGGCTT+CGG	+	chr4_3:49197952-49197971	Msa0644820:CDS	50.0%
	CATGGGCACAGTCATGATCA+CGG	+	chr4_3:49198238-49198257	Msa0644820:intron	50.0%
	GGATCATGATCATGGGATGG+AGG	+	chr4_3:49198315-49198334	Msa0644820:intron	50.0%
!	ATGTATCAAGGGAGTGCAGG+AGG	+	chr4_3:49198654-49198673	Msa0644820:CDS	50.0%
	TGTCATGTAGTGGCTGAACC+TGG	+	chr4_3:49198727-49198746	Msa0644820:CDS	50.0%
	AGGAGGTAGTTGCGAAAAGG+TGG	-	chr4_3:49197173-49197192	None:intergenic	50.0%
	GGAAGGAGGTAGTTGCGAAA+AGG	-	chr4_3:49197176-49197195	None:intergenic	50.0%
	TCTGTTTGCAGTGTGGGCTT+CGG	+	chr4_3:49197952-49197971	Msa0644820:CDS	50.0%
	CATGGGCACAGTCATGATCA+CGG	+	chr4_3:49198238-49198257	Msa0644820:intron	50.0%
	GGATCATGATCATGGGATGG+AGG	+	chr4_3:49198315-49198334	Msa0644820:intron	50.0%
!	ATGTATCAAGGGAGTGCAGG+AGG	+	chr4_3:49198654-49198673	Msa0644820:CDS	50.0%
	TGTCATGTAGTGGCTGAACC+TGG	+	chr4_3:49198727-49198746	Msa0644820:CDS	50.0%
	CTGTTTGCAGTGTGGGCTTC+GGG	+	chr4_3:49197953-49197972	Msa0644820:CDS	55.0%
!!!	GGTTTTGGAGCCTCGGATCA+TGG	+	chr4_3:49198208-49198227	Msa0644820:intron	55.0%
	CTGTTTGCAGTGTGGGCTTC+GGG	+	chr4_3:49197953-49197972	Msa0644820:CDS	55.0%
!!!	GGTTTTGGAGCCTCGGATCA+TGG	+	chr4_3:49198208-49198227	Msa0644820:intron	55.0%
	TTGCAGTGTGGGCTTCGGGT+TGG	+	chr4_3:49197957-49197976	Msa0644820:CDS	60.0%
!	TGCAGTGTGGGCTTCGGGTT+GGG	+	chr4_3:49197958-49197977	Msa0644820:CDS	60.0%
	TTGCAGTGTGGGCTTCGGGT+TGG	+	chr4_3:49197957-49197976	Msa0644820:CDS	60.0%
!	TGCAGTGTGGGCTTCGGGTT+GGG	+	chr4_3:49197958-49197977	Msa0644820:CDS	60.0%
!!	AGTGTGGGCTTCGGGTTGGG+AGG	+	chr4_3:49197961-49197980	Msa0644820:CDS	65.0%
!!	AGTGTGGGCTTCGGGTTGGG+AGG	+	chr4_3:49197961-49197980	Msa0644820:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	49196771	49198834	49196771	ID=Msa0644820;Name=Msa0644820
chr4_3	mRNA	49196771	49198834	49196771	ID=Msa0644820-mRNA-1;Parent=Msa0644820;Name=Msa0644820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=525\|0.25\|0.2\|1\|0\|0\|5\|0\|310
chr4_3	exon	49196771	49197285	49196771	ID=Msa0644820-mRNA-1:exon:11708;Parent=Msa0644820-mRNA-1
chr4_3	exon	49197646	49197875	49197646	ID=Msa0644820-mRNA-1:exon:11709;Parent=Msa0644820-mRNA-1
chr4_3	exon	49197885	49198067	49197885	ID=Msa0644820-mRNA-1:exon:11710;Parent=Msa0644820-mRNA-1
chr4_3	exon	49198092	49198177	49198092	ID=Msa0644820-mRNA-1:exon:11711;Parent=Msa0644820-mRNA-1
chr4_3	exon	49198394	49198834	49198394	ID=Msa0644820-mRNA-1:exon:11712;Parent=Msa0644820-mRNA-1
chr4_3	five_prime_UTR	49196771	49197285	49196771	ID=Msa0644820-mRNA-1:five_prime_utr;Parent=Msa0644820-mRNA-1
chr4_3	five_prime_UTR	49197646	49197655	49197646	ID=Msa0644820-mRNA-1:five_prime_utr;Parent=Msa0644820-mRNA-1
chr4_3	CDS	49197656	49197875	49197656	ID=Msa0644820-mRNA-1:cds;Parent=Msa0644820-mRNA-1
chr4_3	CDS	49197885	49198067	49197885	ID=Msa0644820-mRNA-1:cds;Parent=Msa0644820-mRNA-1
chr4_3	CDS	49198092	49198177	49198092	ID=Msa0644820-mRNA-1:cds;Parent=Msa0644820-mRNA-1
chr4_3	CDS	49198394	49198834	49198394	ID=Msa0644820-mRNA-1:cds;Parent=Msa0644820-mRNA-1

Gene Sequence

>Msa0644820

ATGAAGCAAATGGAACACGAGAAAGCGCCTATCTCAGATACAAGATCGGTAGAGGAAACTGGAATACCTATGACAACATTGTCACTATCCTCGCGCAAAAATTCTGTTTGTCGTTTTTCCACAAAGGAAAAGAGTGTTGGGGGATCAAATGAATCGGCGAAGAAACTTTCTTTACTAATAGTTTTCTATGCTATTGTTATGGTTGTTGAATTTATTGGGGCTCACAGCTTATCTGTTATTAGTGATGCTGCACATTTACTTTCTGACATTGGTGGATTTGCAATCTCTCTGTTTGCAGTGTGGGCTTCGGGTTGGGAGGCAACGCCTCATCAATCTTTCGGGTATAATCGACTTGAGGTTTTAGGTGCTCTTATATCTGTTCAGTTAATTTGGTTCATATCTGGTAGACTTGTTTATAAAAACGATAGAGTGAATGGAAAGCTCATGTTTGCAATTGCCACATTTGGGTTTGTTCTTAATTGTATCATGAATACTAATGTTTTGAATATAAATATCCAAGGGGCTTATTTGCATGTGATGACTGATATGATTCAATCTTTTGGAGTGATGATTGCTGGAGGAGTAATATGGGCTAAACCAGAATGGTTTATTGTTGATCTTTTATGTACTCTAATATTCTCTGTTTTATCCTTAAGTACTACTCTGCCAATGCTTAGGAATATTTTTGGCATTCTAATGGAGAGAACGCCAAGTGAGATTAATGTCATTCAGCTGGAAAATGGTCTTAGATGTATCAAGGGAGTGCAGGAGGTTCACGATTTGCATGTTTGGGCTATAACAGTGGGAAAACTGTTTCTATCTTGTCATGTAGTGGCTGAACCTGGCATAAATTCCATTGATTTACTTTCTGTGATTAAACAATATTGTGAAAACACTTGTCAAATACAACATGTAACGATACAAATTGAG

Protein sequence

>Msa0644820

MKQMEHEKAPISDTRSVEETGIPMTTLSLSSRKNSVCRFSTKEKSVGGSNESAKKLSLLIVFYAIVMVVEFIGAHSLSVISDAAHLLSDIGGFAISLFAVWASGWEATPHQSFGYNRLEVLGALISVQLIWFISGRLVYKNDRVNGKLMFAIATFGFVLNCIMNTNVLNINIQGAYLHVMTDMIQSFGVMIAGGVIWAKPEWFIVDLLCTLIFSVLSLSTTLPMLRNIFGILMERTPSEINVIQLENGLRCIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGINSIDLLSVIKQYCENTCQIQHVTIQIE