Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074200 | sp|Q9Z1A9|TBCD8_MOUSE | 36.555 | 238 | 134 | 5 | 328 | 562 | 500 | 723 | 9.10e-41 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074200 | A0A072VW47 | 97.458 | 708 | 18 | 0 | 24 | 731 | 303 | 1010 | 0.0 | 1415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012060 | Msa0074200 | 0.810497 | 1.119287e-50 | -8.615850e-47 |
| Msa0017510 | Msa0074200 | 0.817173 | 3.781990e-52 | -8.615850e-47 |
| Msa0057520 | Msa0074200 | 0.808327 | 3.270546e-50 | -8.615850e-47 |
| Msa0074200 | Msa0095560 | 0.800700 | 1.274460e-48 | -8.615850e-47 |
| Msa0074200 | Msa0096450 | 0.803902 | 2.792347e-49 | -8.615850e-47 |
| Msa0074200 | Msa0122590 | 0.819710 | 1.006856e-52 | -8.615850e-47 |
| Msa0074200 | Msa0123300 | 0.801683 | 8.019402e-49 | -8.615850e-47 |
| Msa0074200 | Msa0157290 | 0.817001 | 4.134683e-52 | -8.615850e-47 |
| Msa0074200 | Msa0157310 | 0.803457 | 3.454599e-49 | -8.615850e-47 |
| Msa0074200 | Msa0166870 | 0.816367 | 5.734857e-52 | -8.615850e-47 |
| Msa0074200 | Msa0170140 | 0.804691 | 1.912716e-49 | -8.615850e-47 |
| Msa0074200 | Msa0178930 | 0.802469 | 5.529446e-49 | -8.615850e-47 |
| Msa0074200 | Msa0188830 | 0.820246 | 7.590216e-53 | -8.615850e-47 |
| Msa0074200 | Msa0210450 | 0.807895 | 4.041805e-50 | -8.615850e-47 |
| Msa0074200 | Msa0226890 | 0.806560 | 7.754223e-50 | -8.615850e-47 |
| Msa0074200 | Msa0233300 | 0.802324 | 5.921775e-49 | -8.615850e-47 |
| Msa0074200 | Msa0242480 | 0.810573 | 1.077571e-50 | -8.615850e-47 |
| Msa0074200 | Msa0243710 | 0.821639 | 3.628518e-53 | -8.615850e-47 |
| Msa0074200 | Msa0270100 | 0.809658 | 1.697408e-50 | -8.615850e-47 |
| Msa0074200 | Msa0315290 | 0.806780 | 6.967265e-50 | -8.615850e-47 |
| Msa0074200 | Msa0340450 | 0.809966 | 1.457124e-50 | -8.615850e-47 |
| Msa0074200 | Msa0344980 | 0.805913 | 1.060869e-49 | -8.615850e-47 |
| Msa0074200 | Msa0373450 | 0.806166 | 9.387650e-50 | -8.615850e-47 |
| Msa0074200 | Msa0376590 | 0.809410 | 1.918324e-50 | -8.615850e-47 |
| Msa0074200 | Msa0379640 | 0.806343 | 8.615418e-50 | -8.615850e-47 |
| Msa0074200 | Msa0380740 | 0.810585 | 1.071399e-50 | -8.615850e-47 |
| Msa0074200 | Msa0431060 | 0.811926 | 5.484147e-51 | -8.615850e-47 |
| Msa0074200 | Msa0431690 | 0.806585 | 7.657513e-50 | -8.615850e-47 |
| Msa0074200 | Msa0433410 | -0.803442 | 3.480156e-49 | -8.615850e-47 |
| Msa0074200 | Msa0477130 | -0.803074 | 4.146434e-49 | -8.615850e-47 |
| Msa0074200 | Msa0484780 | 0.829746 | 4.331165e-55 | -8.615850e-47 |
| Msa0074200 | Msa0512900 | 0.809515 | 1.821106e-50 | -8.615850e-47 |
| Msa0074200 | Msa0532350 | 0.814257 | 1.689235e-51 | -8.615850e-47 |
| Msa0074200 | Msa0536220 | 0.843098 | 1.726072e-58 | -8.615850e-47 |
| Msa0074200 | Msa0553460 | 0.833225 | 6.025945e-56 | -8.615850e-47 |
| Msa0074200 | Msa0555020 | 0.828109 | 1.078922e-54 | -8.615850e-47 |
| Msa0074200 | Msa0558690 | 0.816037 | 6.799010e-52 | -8.615850e-47 |
| Msa0074200 | Msa0585700 | 0.804353 | 2.249948e-49 | -8.615850e-47 |
| Msa0074200 | Msa0599890 | 0.816752 | 4.704025e-52 | -8.615850e-47 |
| Msa0074200 | Msa0607540 | 0.821118 | 4.784900e-53 | -8.615850e-47 |
| Msa0074200 | Msa0608620 | 0.834193 | 3.452162e-56 | -8.615850e-47 |
| Msa0074200 | Msa0644820 | 0.815332 | 9.761543e-52 | -8.615850e-47 |
| Msa0074200 | Msa0647830 | 0.832627 | 8.486199e-56 | -8.615850e-47 |
| Msa0074200 | Msa0648880 | 0.809389 | 1.938264e-50 | -8.615850e-47 |
| Msa0074200 | Msa0657610 | 0.823388 | 1.422877e-53 | -8.615850e-47 |
| Msa0074200 | Msa0657970 | 0.828540 | 8.492799e-55 | -8.615850e-47 |
| Msa0074200 | Msa0658570 | 0.803438 | 3.486574e-49 | -8.615850e-47 |
| Msa0074200 | Msa0663710 | 0.802065 | 6.693816e-49 | -8.615850e-47 |
| Msa0074200 | Msa0673460 | 0.806741 | 7.099974e-50 | -8.615850e-47 |
| Msa0074200 | Msa0688070 | 0.834522 | 2.854718e-56 | -8.615850e-47 |
| Msa0074200 | Msa0690440 | 0.838524 | 2.732371e-57 | -8.615850e-47 |
| Msa0074200 | Msa0693380 | 0.829783 | 4.242343e-55 | -8.615850e-47 |
| Msa0074200 | Msa0693600 | 0.805635 | 1.213913e-49 | -8.615850e-47 |
| Msa0074200 | Msa0766630 | 0.814520 | 1.477264e-51 | -8.615850e-47 |
| Msa0074200 | Msa0790510 | 0.820764 | 5.772249e-53 | -8.615850e-47 |
| Msa0074200 | Msa0806090 | 0.804433 | 2.164969e-49 | -8.615850e-47 |
| Msa0074200 | Msa0842650 | 0.802144 | 6.448797e-49 | -8.615850e-47 |
| Msa0074200 | Msa0880140 | 0.815384 | 9.502368e-52 | -8.615850e-47 |
| Msa0074200 | Msa0908050 | 0.802881 | 4.545488e-49 | -8.615850e-47 |
| Msa0074200 | Msa0954550 | 0.806284 | 8.864916e-50 | -8.615850e-47 |
| Msa0074200 | Msa0965750 | 0.815715 | 8.020311e-52 | -8.615850e-47 |
| Msa0074200 | Msa0969520 | 0.820338 | 7.229675e-53 | -8.615850e-47 |
| Msa0074200 | Msa0990350 | 0.802278 | 6.051882e-49 | -8.615850e-47 |
| Msa0074200 | Msa1019710 | 0.810062 | 1.389529e-50 | -8.615850e-47 |
| Msa0074200 | Msa1030970 | 0.821087 | 4.865083e-53 | -8.615850e-47 |
| Msa0074200 | Msa1044420 | 0.826089 | 3.285161e-54 | -8.615850e-47 |
| Msa0074200 | Msa1075220 | -0.811855 | 5.680488e-51 | -8.615850e-47 |
| Msa0074200 | Msa1075540 | 0.801425 | 9.057348e-49 | -8.615850e-47 |
| Msa0074200 | Msa1082500 | 0.852273 | 5.144994e-61 | -8.615850e-47 |
| Msa0074200 | Msa1116130 | -0.809663 | 1.692550e-50 | -8.615850e-47 |
| Msa0074200 | Msa1131220 | 0.819612 | 1.060092e-52 | -8.615850e-47 |
| Msa0074200 | Msa1162550 | -0.822627 | 2.140532e-53 | -8.615850e-47 |
| Msa0074200 | Msa1186060 | 0.829889 | 3.998581e-55 | -8.615850e-47 |
| Msa0074200 | Msa1224480 | 0.827977 | 1.161371e-54 | -8.615850e-47 |
| Msa0074200 | Msa1233500 | 0.814647 | 1.385203e-51 | -8.615850e-47 |
| Msa0074200 | Msa1239720 | 0.802324 | 5.920980e-49 | -8.615850e-47 |
| Msa0074200 | Msa1276440 | 0.804706 | 1.899510e-49 | -8.615850e-47 |
| Msa0074200 | Msa1278840 | 0.812247 | 4.667573e-51 | -8.615850e-47 |
| Msa0074200 | Msa1279210 | 0.815038 | 1.134522e-51 | -8.615850e-47 |
| Msa0074200 | Msa1283860 | 0.802217 | 6.230671e-49 | -8.615850e-47 |
| Msa0074200 | Msa1295510 | 0.801968 | 7.010274e-49 | -8.615850e-47 |
| Msa0074200 | Msa1299960 | 0.802968 | 4.360087e-49 | -8.615850e-47 |
| Msa0074200 | Msa1305190 | 0.817095 | 3.939768e-52 | -8.615850e-47 |
| Msa0074200 | Msa1305340 | 0.826114 | 3.240601e-54 | -8.615850e-47 |
| Msa0074200 | Msa1306850 | 0.815199 | 1.044699e-51 | -8.615850e-47 |
| Msa0074200 | Msa1314340 | 0.832094 | 1.149891e-55 | -8.615850e-47 |
| Msa0074200 | Msa1333730 | 0.814723 | 1.332269e-51 | -8.615850e-47 |
| Msa0074200 | Msa1360060 | 0.801163 | 1.024868e-48 | -8.615850e-47 |
| Msa0074200 | Msa1392260 | 0.828766 | 7.492152e-55 | -8.615850e-47 |
| Msa0074200 | Msa1393040 | 0.807756 | 4.327003e-50 | -8.615850e-47 |
| Msa0074200 | Msa1429900 | 0.824884 | 6.338176e-54 | -8.615850e-47 |
| Msa0074200 | Msa1445030 | 0.803932 | 2.753113e-49 | -8.615850e-47 |
| Msa0074200 | Msa1451620 | -0.812464 | 4.183961e-51 | -8.615850e-47 |
| Msa0074200 | Msa1454860 | 0.804939 | 1.697823e-49 | -8.615850e-47 |
| Msa0074200 | Msa1464940 | 0.818960 | 1.492094e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074200 | MtrunA17_Chr1g0181831 | 93.434 | 731 | 18 | 1 | 1 | 731 | 1 | 701 | 0.0 | 1397 |
| Msa0074200 | MtrunA17_Chr1g0213391 | 58.319 | 571 | 195 | 8 | 192 | 735 | 91 | 645 | 0.0 | 630 |
| Msa0074200 | MtrunA17_Chr5g0448071 | 36.054 | 294 | 169 | 8 | 325 | 612 | 106 | 386 | 1.18e-51 | 184 |
| Msa0074200 | MtrunA17_Chr6g0456341 | 31.183 | 279 | 163 | 6 | 329 | 598 | 84 | 342 | 1.34e-30 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0074200 | AT2G37290.3 | 55.724 | 725 | 268 | 11 | 36 | 731 | 6 | 706 | 0.0 | 740 |
| Msa0074200 | AT2G37290.1 | 56.224 | 715 | 260 | 11 | 46 | 731 | 16 | 706 | 0.0 | 738 |
| Msa0074200 | AT2G37290.2 | 53.672 | 749 | 260 | 12 | 46 | 731 | 16 | 740 | 0.0 | 721 |
| Msa0074200 | AT3G55020.3 | 59.675 | 553 | 196 | 6 | 199 | 731 | 103 | 648 | 0.0 | 615 |
| Msa0074200 | AT3G55020.3 | 35.196 | 179 | 105 | 6 | 46 | 215 | 28 | 204 | 1.22e-13 | 75.1 |
| Msa0074200 | AT3G55020.1 | 59.675 | 553 | 196 | 6 | 199 | 731 | 103 | 648 | 0.0 | 615 |
| Msa0074200 | AT3G55020.1 | 36.000 | 175 | 101 | 6 | 46 | 211 | 28 | 200 | 3.94e-13 | 73.6 |
| Msa0074200 | AT3G55020.2 | 59.675 | 553 | 196 | 6 | 199 | 731 | 103 | 648 | 0.0 | 614 |
| Msa0074200 | AT3G55020.2 | 35.196 | 179 | 105 | 6 | 46 | 215 | 28 | 204 | 1.10e-13 | 75.1 |
| Msa0074200 | AT2G39280.1 | 53.925 | 586 | 234 | 8 | 174 | 731 | 57 | 634 | 0.0 | 562 |
| Msa0074200 | AT2G39280.1 | 34.286 | 140 | 82 | 4 | 46 | 177 | 13 | 150 | 2.08e-11 | 68.2 |
| Msa0074200 | AT2G39280.2 | 53.242 | 586 | 233 | 9 | 174 | 731 | 85 | 657 | 0.0 | 546 |
| Msa0074200 | AT2G39280.2 | 34.211 | 152 | 90 | 4 | 34 | 177 | 29 | 178 | 2.54e-12 | 70.9 |
| Msa0074200 | AT3G07890.1 | 35.216 | 301 | 176 | 8 | 325 | 619 | 109 | 396 | 5.32e-52 | 186 |
| Msa0074200 | AT3G07890.4 | 35.216 | 301 | 176 | 8 | 325 | 619 | 109 | 396 | 5.32e-52 | 186 |
| Msa0074200 | AT3G07890.5 | 35.216 | 301 | 176 | 8 | 325 | 619 | 109 | 396 | 5.32e-52 | 186 |
| Msa0074200 | AT3G07890.2 | 35.216 | 301 | 176 | 8 | 325 | 619 | 109 | 396 | 5.32e-52 | 186 |
| Msa0074200 | AT3G07890.3 | 35.216 | 301 | 176 | 8 | 325 | 619 | 109 | 396 | 5.32e-52 | 186 |
| Msa0074200 | AT5G15930.1 | 34.375 | 224 | 122 | 5 | 329 | 543 | 82 | 289 | 1.39e-30 | 124 |
| Msa0074200 | AT3G02460.4 | 33.036 | 224 | 125 | 5 | 329 | 543 | 85 | 292 | 3.56e-28 | 115 |
| Msa0074200 | AT3G02460.1 | 33.036 | 224 | 125 | 5 | 329 | 543 | 85 | 292 | 5.41e-28 | 116 |
| Msa0074200 | AT3G02460.3 | 33.036 | 224 | 125 | 5 | 329 | 543 | 85 | 292 | 9.67e-28 | 115 |
| Msa0074200 | AT3G02460.5 | 33.014 | 209 | 116 | 4 | 329 | 528 | 85 | 278 | 2.17e-25 | 107 |
| Msa0074200 | AT3G02460.2 | 33.014 | 209 | 116 | 4 | 329 | 528 | 85 | 278 | 4.47e-25 | 107 |
| Msa0074200 | AT2G30710.1 | 22.364 | 313 | 194 | 10 | 312 | 584 | 123 | 426 | 5.77e-11 | 65.9 |
Find 165 sgRNAs with CRISPR-Local
Find 518 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTTTGTTAACTCTATT+TGG | 0.187885 | 1_2:+48493750 | None:intergenic |
| ATTCTTATGGATTTACATTA+AGG | 0.237963 | 1_2:-48494363 | Msa0074200:CDS |
| GATAGTTACCTTGTAGATTA+AGG | 0.267343 | 1_2:+48494309 | None:intergenic |
| GCATCTTAGTTATTCGAGTT+TGG | 0.268245 | 1_2:-48490739 | Msa0074200:intron |
| GGCTCCTAAGGAAGATATTC+AGG | 0.270608 | 1_2:-48493403 | Msa0074200:CDS |
| AAGATGAAAGATCAGATAAA+TGG | 0.271939 | 1_2:-48494034 | Msa0074200:CDS |
| GCTTGTCCTTACTGCTTGTA+TGG | 0.273379 | 1_2:-48490445 | Msa0074200:CDS |
| GGAACTGGAGTTTCTTGTTC+AGG | 0.295607 | 1_2:-48493280 | Msa0074200:CDS |
| GCATTTGTCTCTTCTACCTT+TGG | 0.301018 | 1_2:+48493849 | None:intergenic |
| CATCTTAGTTATTCGAGTTT+GGG | 0.302374 | 1_2:-48490738 | Msa0074200:intron |
| CAGGCAATGAACTTCTTTGC+TGG | 0.328624 | 1_2:-48491980 | Msa0074200:CDS |
| GATAAATACGAACCAAGTTT+AGG | 0.330868 | 1_2:+48491032 | None:intergenic |
| TCGAACAGCGCTGGCTCTAA+TGG | 0.332061 | 1_2:-48490678 | Msa0074200:CDS |
| ACCTCTCCTCTAAGATCCTT+TGG | 0.333813 | 1_2:+48493249 | None:intergenic |
| ACCTAATGACAATGGCGATA+TGG | 0.339307 | 1_2:-48490244 | Msa0074200:CDS |
| CATGTTTACAGGGATTCTTA+TGG | 0.344482 | 1_2:-48494376 | Msa0074200:intron |
| CACCCTGCTTTGGACGAAAA+TGG | 0.347325 | 1_2:-48492851 | Msa0074200:CDS |
| CGTGAAAGATTTCCTAAACT+TGG | 0.349418 | 1_2:-48491044 | Msa0074200:intron |
| GGTTCTGATTCTTCTATAGA+TGG | 0.350793 | 1_2:+48493435 | None:intergenic |
| TTTCCCAGGTCACCCTGCTT+TGG | 0.353053 | 1_2:-48492861 | Msa0074200:CDS |
| ACTCTATTGCAATCACTTGC+TGG | 0.355603 | 1_2:-48490489 | Msa0074200:CDS |
| GGAACTAGAAACAGCTCTAA+TGG | 0.366885 | 1_2:-48488097 | Msa0074200:CDS |
| CAGGTATGGCAAGCCTTTGT+AGG | 0.371064 | 1_2:-48493137 | Msa0074200:CDS |
| TGTGACCGAGGCAAGATTGC+AGG | 0.378625 | 1_2:-48490412 | Msa0074200:CDS |
| TTTGCAGGTGGTTTGGTTGA+AGG | 0.383780 | 1_2:-48488729 | Msa0074200:intron |
| ATAAAAGAAGTTACTGATCC+TGG | 0.388707 | 1_2:-48493690 | Msa0074200:CDS |
| GAAGAATCAGAACCTGTAGA+AGG | 0.395401 | 1_2:-48493426 | Msa0074200:CDS |
| ACCATATCGCCATTGTCATT+AGG | 0.400025 | 1_2:+48490243 | None:intergenic |
| CTGGCTCTAATGGAATTATA+TGG | 0.402908 | 1_2:-48490668 | Msa0074200:intron |
| TCCTTAGGAGCCCCTTCTAC+AGG | 0.404298 | 1_2:+48493414 | None:intergenic |
| TGCCAGAAGAAAATGCCTTT+TGG | 0.406728 | 1_2:-48491940 | Msa0074200:intron |
| TATCTGCTGCAGCAGGGAAA+TGG | 0.407229 | 1_2:-48493028 | Msa0074200:CDS |
| CAACTTAGATGCAAGCCCTT+TGG | 0.408640 | 1_2:+48490311 | None:intergenic |
| CCTCTCCTCTAAGATCCTTT+GGG | 0.413885 | 1_2:+48493250 | None:intergenic |
| CAATAATAATAACCTGAGTA+TGG | 0.421905 | 1_2:+48488670 | None:intergenic |
| AGTTAATCATCTAGATTACT+TGG | 0.423177 | 1_2:-48490923 | Msa0074200:CDS |
| AGACCAGCGTTGAACCTTAC+GGG | 0.424285 | 1_2:+48493563 | None:intergenic |
| TGGGATGTTCTGCTATTTGA+AGG | 0.428824 | 1_2:-48490719 | Msa0074200:CDS |
| CTCTTCTACCTTTGGACTGT+CGG | 0.451694 | 1_2:+48493857 | None:intergenic |
| CTCCTCATAGGGTAAGTAAC+GGG | 0.451749 | 1_2:-48493905 | Msa0074200:CDS |
| TGCAAAGGAGCTACACCATT+CGG | 0.452553 | 1_2:-48493598 | Msa0074200:CDS |
| AAGGAAATGATTCAAGTAAG+AGG | 0.454115 | 1_2:-48493812 | Msa0074200:CDS |
| AAGAAGAGGGAACTCCTCAT+AGG | 0.454398 | 1_2:-48493917 | Msa0074200:CDS |
| CTATATCTTTGTGCGTATTG+AGG | 0.455696 | 1_2:+48494340 | None:intergenic |
| ATGAAAGTTGAGAAGATAAA+CGG | 0.456984 | 1_2:-48493474 | Msa0074200:CDS |
| TAGAGCTGTTTCTAGTTCCT+CGG | 0.457779 | 1_2:+48488101 | None:intergenic |
| AGAGCTCAATATTTCTTCAA+TGG | 0.459160 | 1_2:+48493518 | None:intergenic |
| GAGGAGAAGTAACCTGTTCA+TGG | 0.459590 | 1_2:+48490115 | None:intergenic |
| CTTGTCCTTACTGCTTGTAT+GGG | 0.459930 | 1_2:-48490444 | Msa0074200:CDS |
| GATGTTCTATCTGCTGCAGC+AGG | 0.460337 | 1_2:-48493035 | Msa0074200:CDS |
| GGTTGAGCTATGCAGATTGC+TGG | 0.460576 | 1_2:-48488708 | Msa0074200:CDS |
| TAGACCAGCGTTGAACCTTA+CGG | 0.461509 | 1_2:+48493562 | None:intergenic |
| TCCCCTTCACTGGCCCTCCC+AGG | 0.461692 | 1_2:+48493672 | None:intergenic |
| GTAACCTGTTCATGGACATC+TGG | 0.461869 | 1_2:+48490123 | None:intergenic |
| TCCACAATTTCGAATCATAC+AGG | 0.462928 | 1_2:-48494955 | Msa0074200:intron |
| TCGTCCAAAGCAGGGTGACC+TGG | 0.464111 | 1_2:+48492857 | None:intergenic |
| ACTTGAATCATCCCCTTCAC+TGG | 0.468248 | 1_2:+48493662 | None:intergenic |
| GGGTCTTTCTTTCTTCCGAA+TGG | 0.473917 | 1_2:+48493583 | None:intergenic |
| ACCTGTAGAAGGGGCTCCTA+AGG | 0.476336 | 1_2:-48493415 | Msa0074200:CDS |
| TCTTTATGAACATGATTCCA+TGG | 0.476774 | 1_2:-48490858 | Msa0074200:CDS |
| GGAGTCCCAAAGGATCTTAG+AGG | 0.478569 | 1_2:-48493255 | Msa0074200:CDS |
| TCTCCCTGAATATCTTCCTT+AGG | 0.479753 | 1_2:+48493399 | None:intergenic |
| GAACTGGAGTTTCTTGTTCA+GGG | 0.481923 | 1_2:-48493279 | Msa0074200:CDS |
| CAAGCATGACCCAGGGTCAC+TGG | 0.482780 | 1_2:-48490280 | Msa0074200:CDS |
| TAAGAATGTGCAGTTGGACT+TGG | 0.492915 | 1_2:-48490214 | Msa0074200:CDS |
| AGAAACAGCTCTAATGGAAA+AGG | 0.495330 | 1_2:-48488091 | Msa0074200:CDS |
| CCACTTTGGCATCAATATTG+AGG | 0.496306 | 1_2:+48490154 | None:intergenic |
| TTGAGCTCTCGTGTCAAGAA+AGG | 0.498122 | 1_2:-48493504 | Msa0074200:CDS |
| TTTCTTCTACCAGTGACCCT+GGG | 0.499737 | 1_2:+48490271 | None:intergenic |
| GACATACCGCGAACTTTCCC+AGG | 0.500707 | 1_2:-48492875 | Msa0074200:CDS |
| CCCCTCTGTTGGGTACTGTC+AGG | 0.501153 | 1_2:-48492783 | Msa0074200:intron |
| CCAAATAGAGTTAACAAAGA+AGG | 0.502011 | 1_2:-48493750 | Msa0074200:CDS |
| TGCACTAATGAGACACTAGA+TGG | 0.505018 | 1_2:-48493372 | Msa0074200:CDS |
| CCTACCAGATGTCCATGAAC+AGG | 0.505495 | 1_2:-48490127 | Msa0074200:intron |
| ATTGTGGAGGAAATTGAAAG+TGG | 0.506377 | 1_2:+48494970 | None:intergenic |
| AGAAGAAATGATAGAATCCC+AGG | 0.509368 | 1_2:-48491238 | Msa0074200:intron |
| CTCGACATAACCCCTCTGTT+GGG | 0.511757 | 1_2:-48492793 | Msa0074200:CDS |
| TCTAGATTACTTGGGAGTGC+AGG | 0.519245 | 1_2:-48490914 | Msa0074200:CDS |
| ACCTGTATGATTCGAAATTG+TGG | 0.523692 | 1_2:+48494954 | None:intergenic |
| CAGTTCCTGCAATCTTGCCT+CGG | 0.524449 | 1_2:+48490407 | None:intergenic |
| ATCTGGTAGGGAATCCACTT+TGG | 0.526741 | 1_2:+48490140 | None:intergenic |
| ATCCTGGGAGGGCCAGTGAA+GGG | 0.527274 | 1_2:-48493674 | Msa0074200:CDS |
| AGAAGAGGGAACTCCTCATA+GGG | 0.537183 | 1_2:-48493916 | Msa0074200:CDS |
| CTTTATGAACATGATTCCAT+GGG | 0.540949 | 1_2:-48490857 | Msa0074200:CDS |
| AACTAACAGTTGCGAAGGCA+AGG | 0.541203 | 1_2:-48493063 | Msa0074200:CDS |
| TCCTGGGAGGGCCAGTGAAG+GGG | 0.541304 | 1_2:-48493673 | Msa0074200:CDS |
| AAGAATCAGAACCTGTAGAA+GGG | 0.543866 | 1_2:-48493425 | Msa0074200:CDS |
| GCTCGACATAACCCCTCTGT+TGG | 0.545869 | 1_2:-48492794 | Msa0074200:CDS |
| CTGATTCTTCTATAGATGGA+AGG | 0.546548 | 1_2:+48493439 | None:intergenic |
| CGTCCAAAGCAGGGTGACCT+GGG | 0.547394 | 1_2:+48492858 | None:intergenic |
| AGAAACTCCAGTTCCTTCCA+TGG | 0.549481 | 1_2:+48493288 | None:intergenic |
| TACAAGCAGTAAGGACAAGC+TGG | 0.549735 | 1_2:+48490448 | None:intergenic |
| TCCCCGTTACTTACCCTATG+AGG | 0.550516 | 1_2:+48493903 | None:intergenic |
| ATCGTCTGCAGTTGAGCGCA+AGG | 0.552982 | 1_2:-48488056 | Msa0074200:CDS |
| TAAAAGAAGTTACTGATCCT+GGG | 0.553840 | 1_2:-48493689 | Msa0074200:CDS |
| TATAGTTTCAAGCATGACCC+AGG | 0.554282 | 1_2:-48490288 | Msa0074200:CDS |
| TATGCTATTTCGAACAGCGC+TGG | 0.554998 | 1_2:-48490687 | Msa0074200:CDS |
| AACATGATTCCATGGGAAAG+TGG | 0.555280 | 1_2:-48490850 | Msa0074200:intron |
| TCTTCAATGGCACTAAGAGA+TGG | 0.555356 | 1_2:+48493531 | None:intergenic |
| CTGTTCATGGACATCTGGTA+GGG | 0.557704 | 1_2:+48490128 | None:intergenic |
| ATAGAAGAAAGGTCAAAGAA+AGG | 0.558990 | 1_2:-48490351 | Msa0074200:CDS |
| GATCCTGGGAGGGCCAGTGA+AGG | 0.560349 | 1_2:-48493675 | Msa0074200:CDS |
| TGCTAGTAGTAAACGCCTCA+AGG | 0.560918 | 1_2:+48492820 | None:intergenic |
| CCTGTTCATGGACATCTGGT+AGG | 0.561806 | 1_2:+48490127 | None:intergenic |
| ACTTGGGAGTGCAGGTGGCA+TGG | 0.563275 | 1_2:-48490906 | Msa0074200:CDS |
| CCTCAATATTGATGCCAAAG+TGG | 0.565085 | 1_2:-48490154 | Msa0074200:CDS |
| CAACGTACGCTTACTTAACA+AGG | 0.568230 | 1_2:+48494613 | None:intergenic |
| TAAGGAAGATATTCAGGGAG+AGG | 0.568280 | 1_2:-48493397 | Msa0074200:CDS |
| CGGGGATGATTCAAGTAGCA+AGG | 0.569254 | 1_2:-48493886 | Msa0074200:CDS |
| AGAAAAGATCTGCCATACTC+AGG | 0.572795 | 1_2:-48488682 | Msa0074200:intron |
| TTAGTTACAACAACAGATGC+AGG | 0.574166 | 1_2:-48490522 | Msa0074200:CDS |
| ATCTTGCCTCGGTCACAGCT+AGG | 0.574382 | 1_2:+48490418 | None:intergenic |
| AGCTGATAAGAATGTGCAGT+TGG | 0.578288 | 1_2:-48490220 | Msa0074200:CDS |
| GTATAACTCAGGACATTCGT+TGG | 0.580032 | 1_2:-48491294 | Msa0074200:intron |
| TCTGTTGTTGTAACTAATGC+AGG | 0.580339 | 1_2:+48490528 | None:intergenic |
| TACAGCAAATAATTCTGCAA+AGG | 0.580535 | 1_2:-48493613 | Msa0074200:CDS |
| GTTAATCATCTAGATTACTT+GGG | 0.581715 | 1_2:-48490922 | Msa0074200:CDS |
| GCTCCTAAGGAAGATATTCA+GGG | 0.582697 | 1_2:-48493402 | Msa0074200:CDS |
| GGTAACCCATACAAGCAGTA+AGG | 0.586072 | 1_2:+48490439 | None:intergenic |
| GGGTGACCTGGGAAAGTTCG+CGG | 0.586499 | 1_2:+48492869 | None:intergenic |
| ACCTGACAGTACCCAACAGA+GGG | 0.587069 | 1_2:+48492782 | None:intergenic |
| TAGATGGTGGTAACAGCCCA+AGG | 0.587236 | 1_2:-48493356 | Msa0074200:CDS |
| AGTAGCGAGGTAAAAGAAGA+GGG | 0.587418 | 1_2:-48493930 | Msa0074200:CDS |
| AGATTACTTGGGAGTGCAGG+TGG | 0.589590 | 1_2:-48490911 | Msa0074200:CDS |
| CAAGAAACTAACAGTTGCGA+AGG | 0.600202 | 1_2:-48493068 | Msa0074200:CDS |
| AAGTAGCGAGGTAAAAGAAG+AGG | 0.600562 | 1_2:-48493931 | Msa0074200:CDS |
| CCCAAAGGATCTTAGAGGAG+AGG | 0.605081 | 1_2:-48493250 | Msa0074200:intron |
| ATAAAGATTGATAGAAACCA+TGG | 0.606123 | 1_2:+48490874 | None:intergenic |
| AGCTCTAATGGAAAAGGTGA+AGG | 0.608776 | 1_2:-48488085 | Msa0074200:CDS |
| GGTTTCTTCCGACAGTCCAA+AGG | 0.608808 | 1_2:-48493865 | Msa0074200:CDS |
| TCGTGTGTTCACACCTACAA+AGG | 0.609319 | 1_2:+48493124 | None:intergenic |
| AGAAGTTACTGATCCTGGGA+GGG | 0.613294 | 1_2:-48493685 | Msa0074200:CDS |
| AATGCAGACATAATTAGTGA+AGG | 0.613496 | 1_2:-48493831 | Msa0074200:CDS |
| AGAGTATTCCTTAATCTACA+AGG | 0.616845 | 1_2:-48494317 | Msa0074200:intron |
| GGGTTACCTAGCTGTGACCG+AGG | 0.620962 | 1_2:-48490424 | Msa0074200:CDS |
| TGTAGGTGTGAACACACGAC+GGG | 0.624136 | 1_2:-48493120 | Msa0074200:CDS |
| AGAATCAGAACCTGTAGAAG+GGG | 0.629859 | 1_2:-48493424 | Msa0074200:CDS |
| CTGGAGTTTCTTGTTCAGGG+AGG | 0.633518 | 1_2:-48493276 | Msa0074200:CDS |
| TGTTCAGGGAGGAGTCCCAA+AGG | 0.636381 | 1_2:-48493265 | Msa0074200:CDS |
| CTGTTCGAAATAGCATAACA+CGG | 0.636645 | 1_2:+48490693 | None:intergenic |
| ACTCCTCATAGGGTAAGTAA+CGG | 0.642978 | 1_2:-48493906 | Msa0074200:CDS |
| TCTATAATATCTAAAACAGA+CGG | 0.643315 | 1_2:+48490369 | None:intergenic |
| ATGTTCTATCTGCTGCAGCA+GGG | 0.649404 | 1_2:-48493034 | Msa0074200:CDS |
| AGGTGTGAACACACGACGGG+TGG | 0.649560 | 1_2:-48493117 | Msa0074200:CDS |
| ATGGAGAAAGCAGATTGAGA+AGG | 0.650978 | 1_2:-48493009 | Msa0074200:intron |
| TCGTCTGCAGTTGAGCGCAA+GGG | 0.651354 | 1_2:-48488055 | Msa0074200:intron |
| AGGCAAGATTGCAGGAACTG+AGG | 0.652313 | 1_2:-48490404 | Msa0074200:CDS |
| TCATATCTTGAACAGAGCCG+AGG | 0.653362 | 1_2:-48488118 | Msa0074200:intron |
| TGAGCTATGCAGATTGCTGG+AGG | 0.658548 | 1_2:-48488705 | Msa0074200:CDS |
| TAATATCTAAAACAGACGGT+CGG | 0.666423 | 1_2:+48490373 | None:intergenic |
| GGAAGAAAGAAAGACCCGTA+AGG | 0.666823 | 1_2:-48493577 | Msa0074200:CDS |
| ATTCTTCTATAGATGGAAGG+TGG | 0.669300 | 1_2:+48493442 | None:intergenic |
| TGTATGATTCGAAATTGTGG+AGG | 0.670349 | 1_2:+48494957 | None:intergenic |
| ATAGTTTCAAGCATGACCCA+GGG | 0.673596 | 1_2:-48490287 | Msa0074200:CDS |
| ATTGAAAGCTGAAAGTAGCG+AGG | 0.682041 | 1_2:-48493943 | Msa0074200:CDS |
| TCCTCATAGGGTAAGTAACG+GGG | 0.691440 | 1_2:-48493904 | Msa0074200:CDS |
| AAGAAGTTACTGATCCTGGG+AGG | 0.692089 | 1_2:-48493686 | Msa0074200:CDS |
| AGATGGTGGTAACAGCCCAA+GGG | 0.696356 | 1_2:-48493355 | Msa0074200:CDS |
| TGGCATGGATATCTGCACCA+TGG | 0.701471 | 1_2:-48490891 | Msa0074200:CDS |
| TACCTGACAGTACCCAACAG+AGG | 0.706079 | 1_2:+48492781 | None:intergenic |
| ACTAATGAGACACTAGATGG+TGG | 0.708991 | 1_2:-48493369 | Msa0074200:CDS |
| TTGTAGGTGTGAACACACGA+CGG | 0.712835 | 1_2:-48493121 | Msa0074200:CDS |
| AAAATGGCAGAAATTCCTTG+AGG | 0.726393 | 1_2:-48492835 | Msa0074200:CDS |
| AGACCCGTAAGGTTCAACGC+TGG | 0.736163 | 1_2:-48493566 | Msa0074200:CDS |
| CCTGACAGTACCCAACAGAG+GGG | 0.792308 | 1_2:+48492783 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATAGTTTTAAATAAAATAT+TGG | - | chr1_2:48489409-48489428 | Msa0074200:intron | 10.0% |
| !!! | AATAATATATCTTTTATTCT+AGG | - | chr1_2:48491613-48491632 | Msa0074200:intron | 10.0% |
| !!! | TAATTTAAAATTCTAATTTC+TGG | - | chr1_2:48493116-48493135 | Msa0074200:CDS | 10.0% |
| !!! | AATTTAAAATTCTAATTTCT+GGG | - | chr1_2:48493117-48493136 | Msa0074200:CDS | 10.0% |
| !! | CAAATTATATTTATTCTTAA+CGG | - | chr1_2:48493253-48493272 | Msa0074200:CDS | 10.0% |
| !! | AATAAAGAATATTTGAAAAT+GGG | + | chr1_2:48493816-48493835 | None:intergenic | 10.0% |
| !! | AAATAAAGAATATTTGAAAA+TGG | + | chr1_2:48493817-48493836 | None:intergenic | 10.0% |
| !!! | TTTATTAAAATTTCTGAAAA+TGG | - | chr1_2:48494586-48494605 | Msa0074200:intron | 10.0% |
| !! | TTTATGTTTATATTTCTTGT+CGG | - | chr1_2:48487699-48487718 | Msa0074200:intron | 15.0% |
| !!! | AGTATTATATTTTAGCTTTT+TGG | - | chr1_2:48487995-48488014 | Msa0074200:intron | 15.0% |
| !! | TATGATAAATACATCAATTT+AGG | + | chr1_2:48488100-48488119 | None:intergenic | 15.0% |
| !!! | TAACTAATTTTTCATAATAG+GGG | + | chr1_2:48489601-48489620 | None:intergenic | 15.0% |
| !!! | CTAACTAATTTTTCATAATA+GGG | + | chr1_2:48489602-48489621 | None:intergenic | 15.0% |
| !!! | ACTAACTAATTTTTCATAAT+AGG | + | chr1_2:48489603-48489622 | None:intergenic | 15.0% |
| !!! | AACGAACAAAAATATTTTTA+CGG | + | chr1_2:48489654-48489673 | None:intergenic | 15.0% |
| !!! | TTAATTTGTCTTATGTTTAT+AGG | - | chr1_2:48490830-48490849 | Msa0074200:intron | 15.0% |
| !!! | ATTATTGATGATTATTTTGA+AGG | - | chr1_2:48490895-48490914 | Msa0074200:CDS | 15.0% |
| !! | AACTTATGTCTTTAATAAAA+TGG | - | chr1_2:48490959-48490978 | Msa0074200:intron | 15.0% |
| !!! | TTTTATTCTATGAATGTTTT+TGG | - | chr1_2:48491216-48491235 | Msa0074200:intron | 15.0% |
| !!! | TTTTAGATATTATAGAAGAA+AGG | - | chr1_2:48491803-48491822 | Msa0074200:intron | 15.0% |
| !!! | TAATACATGATTTCAAATTT+TGG | + | chr1_2:48493077-48493096 | None:intergenic | 15.0% |
| !! | TAATACATGATTTCAAATAT+AGG | + | chr1_2:48493279-48493298 | None:intergenic | 15.0% |
| !! | ATAATTATTTATCCTATAGA+CGG | - | chr1_2:48493357-48493376 | Msa0074200:CDS | 15.0% |
| !!! | TGTTTTAATTATCTATTTGT+TGG | - | chr1_2:48494163-48494182 | Msa0074200:intron | 15.0% |
| !!! | GTTTTAATTATCTATTTGTT+GGG | - | chr1_2:48494164-48494183 | Msa0074200:intron | 15.0% |
| !!! | TCAATTTGCATTTATTTTTT+TGG | - | chr1_2:48494866-48494885 | Msa0074200:intron | 15.0% |
| !! | AATAAAAAGTGATTAATGAG+TGG | + | chr1_2:48487349-48487368 | None:intergenic | 20.0% |
| !! | ACAAATCAAAATTGAGATAT+TGG | + | chr1_2:48487401-48487420 | None:intergenic | 20.0% |
| !!! | GATTTGTTAACAATTCTATT+TGG | - | chr1_2:48487414-48487433 | Msa0074200:intron | 20.0% |
| !!! | CTGTTTTATACAGAAATTAT+AGG | - | chr1_2:48487663-48487682 | Msa0074200:intron | 20.0% |
| !! | ATTCTTATGGATTTACATTA+AGG | - | chr1_2:48487802-48487821 | Msa0074200:intron | 20.0% |
| !! | ATATTTGAATTTGGCAATAA+AGG | + | chr1_2:48487943-48487962 | None:intergenic | 20.0% |
| !!! | ATTGTATTTCTGTTACTTAT+TGG | + | chr1_2:48488072-48488091 | None:intergenic | 20.0% |
| !! | ATTGATGTATTTATCATATC+AGG | - | chr1_2:48488102-48488121 | Msa0074200:CDS | 20.0% |
| !! | ACAAATCAAAATAAATTCCA+AGG | + | chr1_2:48489198-48489217 | None:intergenic | 20.0% |
| !!! | TGGAATTTATTTTGATTTGT+AGG | - | chr1_2:48489198-48489217 | Msa0074200:intron | 20.0% |
| !! | ATTCCAAAAGTTTAAACATT+CGG | + | chr1_2:48489459-48489478 | None:intergenic | 20.0% |
| !! | ATTATAGATAAATTTCCCAA+TGG | + | chr1_2:48489555-48489574 | None:intergenic | 20.0% |
| !! | TTAGAAAAGAAAATTTAGAC+TGG | + | chr1_2:48489921-48489940 | None:intergenic | 20.0% |
| !!! | GTCTAAATTTTCTTTTCTAA+AGG | - | chr1_2:48489921-48489940 | Msa0074200:intron | 20.0% |
| !! | ACTATTATCTATGTTGTATA+GGG | + | chr1_2:48490291-48490310 | None:intergenic | 20.0% |
| !! | AACTATTATCTATGTTGTAT+AGG | + | chr1_2:48490292-48490311 | None:intergenic | 20.0% |
| !!! | ATTTGATAATCATAGTATTG+AGG | - | chr1_2:48491017-48491036 | Msa0074200:intron | 20.0% |
| !!! | TTTGATAATCATAGTATTGA+GGG | - | chr1_2:48491018-48491037 | Msa0074200:intron | 20.0% |
| !!! | GAAAGTGGTAAAATATTTTT+TGG | - | chr1_2:48491330-48491349 | Msa0074200:intron | 20.0% |
| !!! | TCTATAATATCTAAAACAGA+CGG | + | chr1_2:48491799-48491818 | None:intergenic | 20.0% |
| !! | AAGTTTAAATCTAATTCACA+AGG | + | chr1_2:48492118-48492137 | None:intergenic | 20.0% |
| !! | TACATCAAATTAGAGTTTAA+TGG | + | chr1_2:48492146-48492165 | None:intergenic | 20.0% |
| !! | TGCACTTAAAAGATTTAAAA+GGG | - | chr1_2:48492354-48492373 | Msa0074200:intron | 20.0% |
| !! | AAGATGTAATTCTGTATTAA+AGG | + | chr1_2:48492462-48492481 | None:intergenic | 20.0% |
| !!! | GCTTTCTATTTTCAAATTTA+AGG | - | chr1_2:48492750-48492769 | Msa0074200:intron | 20.0% |
| !!! | AGTTTTTTTGCTAAAGAAAA+TGG | - | chr1_2:48492785-48492804 | Msa0074200:CDS | 20.0% |
| !!! | CTAATTTTCTGGTTTAATTA+CGG | - | chr1_2:48493329-48493348 | Msa0074200:CDS | 20.0% |
| !! | TATAAAGATGCATATATTGT+TGG | + | chr1_2:48493766-48493785 | None:intergenic | 20.0% |
| !! | TCATATTTATGAAGTAACAT+GGG | + | chr1_2:48493962-48493981 | None:intergenic | 20.0% |
| !! | TTCATATTTATGAAGTAACA+TGG | + | chr1_2:48493963-48493982 | None:intergenic | 20.0% |
| !!! | ATCCTAGATTTTTTTTTATC+AGG | + | chr1_2:48494436-48494455 | None:intergenic | 20.0% |
| !! | TTTCCTATAAATATACTTCA+TGG | - | chr1_2:48494633-48494652 | Msa0074200:CDS | 20.0% |
| !!! | TAAATCGATTGTTGTTTTTA+TGG | + | chr1_2:48494731-48494750 | None:intergenic | 20.0% |
| !!! | ACAATCGATTTATCTAAAAT+TGG | - | chr1_2:48494739-48494758 | Msa0074200:intron | 20.0% |
| !!! | TGCATTTATTTTTTTGGTTA+AGG | - | chr1_2:48494872-48494891 | Msa0074200:intron | 20.0% |
| !! | ACGTATTTTGTATTTTGTTG+CGG | - | chr1_2:48487616-48487635 | Msa0074200:intron | 25.0% |
| ! | CAGGGAAATATATTTGAATT+TGG | + | chr1_2:48487952-48487971 | None:intergenic | 25.0% |
| ! | TATATTTCCCTGAATAATCA+AGG | - | chr1_2:48487960-48487979 | Msa0074200:intron | 25.0% |
| !! | TGTTTTTCCTTGATTATTCA+GGG | + | chr1_2:48487970-48487989 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCCTTGATTATTC+AGG | + | chr1_2:48487971-48487990 | None:intergenic | 25.0% |
| ! | AAGATGAAAGATCAGATAAA+TGG | - | chr1_2:48488131-48488150 | Msa0074200:intron | 25.0% |
| !! | ATCAGTAACTTCTTTTATCT+CGG | + | chr1_2:48488473-48488492 | None:intergenic | 25.0% |
| ! | ATGAAAGTTGAGAAGATAAA+CGG | - | chr1_2:48488691-48488710 | Msa0074200:CDS | 25.0% |
| !! | TTAAATCATTTTCTTCCCTT+GGG | + | chr1_2:48488828-48488847 | None:intergenic | 25.0% |
| !! | TTTCCGAATGTTTAAACTTT+TGG | - | chr1_2:48489453-48489472 | Msa0074200:intron | 25.0% |
| ! | ATTGAAATATATTGTGCCAT+TGG | - | chr1_2:48489536-48489555 | Msa0074200:intron | 25.0% |
| !! | TTGAAATATATTGTGCCATT+GGG | - | chr1_2:48489537-48489556 | Msa0074200:intron | 25.0% |
| ! | TGTATAAGAAAATTAGACTC+TGG | + | chr1_2:48489742-48489761 | None:intergenic | 25.0% |
| ! | ATGTTAGTATACTGTAAAAC+TGG | - | chr1_2:48489849-48489868 | Msa0074200:intron | 25.0% |
| !! | TAAAACTGGTAACTTCTTTT+GGG | - | chr1_2:48489863-48489882 | Msa0074200:intron | 25.0% |
| ! | CATAGCTCAGAAAAATAATT+TGG | + | chr1_2:48490003-48490022 | None:intergenic | 25.0% |
| !!! | CAAATTATTTTTCTGAGCTA+TGG | - | chr1_2:48490001-48490020 | Msa0074200:intron | 25.0% |
| ! | GGATAGGATTACAAAATAAA+AGG | - | chr1_2:48490022-48490041 | Msa0074200:intron | 25.0% |
| !! | TTTTGTTACTAAATACATGC+AGG | - | chr1_2:48490166-48490185 | Msa0074200:CDS | 25.0% |
| ! | CTATTATCTATGTTGTATAG+GGG | + | chr1_2:48490290-48490309 | None:intergenic | 25.0% |
| ! | TACAACATAGATAATAGTTG+TGG | - | chr1_2:48490293-48490312 | Msa0074200:CDS | 25.0% |
| ! | TCTTATGGCAACTAATTATA+AGG | - | chr1_2:48490340-48490359 | Msa0074200:CDS | 25.0% |
| ! | CTTATGGCAACTAATTATAA+GGG | - | chr1_2:48490341-48490360 | Msa0074200:CDS | 25.0% |
| ! | AACTGTATCAAAAGAAGTAA+TGG | - | chr1_2:48490433-48490452 | Msa0074200:CDS | 25.0% |
| !! | ATCATGTTGGTAAAAAACTA+GGG | + | chr1_2:48490490-48490509 | None:intergenic | 25.0% |
| !! | TATCATGTTGGTAAAAAACT+AGG | + | chr1_2:48490491-48490510 | None:intergenic | 25.0% |
| ! | AAAAATGTTATTGAGTATCC+AGG | - | chr1_2:48490542-48490561 | Msa0074200:intron | 25.0% |
| !! | TCTTGGTTATCTTGTATTTT+GGG | + | chr1_2:48490605-48490624 | None:intergenic | 25.0% |
| !! | TTCTTGGTTATCTTGTATTT+TGG | + | chr1_2:48490606-48490625 | None:intergenic | 25.0% |
| ! | TAGTAAACATCCAATAAAGA+AGG | + | chr1_2:48490798-48490817 | None:intergenic | 25.0% |
| ! | AGTTAATCATCTAGATTACT+TGG | - | chr1_2:48491242-48491261 | Msa0074200:CDS | 25.0% |
| ! | GTTAATCATCTAGATTACTT+GGG | - | chr1_2:48491243-48491262 | Msa0074200:CDS | 25.0% |
| ! | ATAAAGATTGATAGAAACCA+TGG | + | chr1_2:48491294-48491313 | None:intergenic | 25.0% |
| !!! | TATAGTATTGATTTCGATCT+TGG | - | chr1_2:48491369-48491388 | Msa0074200:intron | 25.0% |
| !!! | GAGTTTTTAAAGATTCCAAA+GGG | - | chr1_2:48491839-48491858 | Msa0074200:intron | 25.0% |
| ! | GAAAAAAAACCTAATGACAA+TGG | - | chr1_2:48491913-48491932 | Msa0074200:intron | 25.0% |
| ! | TATATCTCAGTATCATAGAT+AGG | + | chr1_2:48492320-48492339 | None:intergenic | 25.0% |
| ! | GTGCACTTAAAAGATTTAAA+AGG | - | chr1_2:48492353-48492372 | Msa0074200:intron | 25.0% |
| !!! | TTTTAAGTACGATTTTCTGA+AGG | + | chr1_2:48492487-48492506 | None:intergenic | 25.0% |
| ! | AGAAAATAATTATCTCCCTA+TGG | + | chr1_2:48492520-48492539 | None:intergenic | 25.0% |
| ! | ATCTGTCTACTTAACAAATA+TGG | - | chr1_2:48492609-48492628 | Msa0074200:intron | 25.0% |
| ! | TCTGTCTACTTAACAAATAT+GGG | - | chr1_2:48492610-48492629 | Msa0074200:intron | 25.0% |
| !!! | TTTTTTGCTAAAGAAAATGG+AGG | - | chr1_2:48492788-48492807 | Msa0074200:CDS | 25.0% |
| ! | ATACTTCTCTAGTAAGAATA+TGG | + | chr1_2:48492865-48492884 | None:intergenic | 25.0% |
| !!! | TATGCGTTGAACTTTATTTT+TGG | - | chr1_2:48492914-48492933 | Msa0074200:intron | 25.0% |
| !!! | ATGCGTTGAACTTTATTTTT+GGG | - | chr1_2:48492915-48492934 | Msa0074200:intron | 25.0% |
| ! | GTCAAATTATATACTCTCAA+TGG | - | chr1_2:48493051-48493070 | Msa0074200:CDS | 25.0% |
| !! | CTAATTTCTGGGTTTAATTA+TGG | - | chr1_2:48493128-48493147 | Msa0074200:CDS | 25.0% |
| !! | CATTTCAAAGTCTAATTTTC+TGG | - | chr1_2:48493318-48493337 | Msa0074200:CDS | 25.0% |
| ! | CAATAATAATAACCTGAGTA+TGG | + | chr1_2:48493498-48493517 | None:intergenic | 25.0% |
| ! | CATACTCAGGTTATTATTAT+TGG | - | chr1_2:48493496-48493515 | Msa0074200:CDS | 25.0% |
| !!! | GTTATATTTTGGAAACATTC+TGG | + | chr1_2:48493572-48493591 | None:intergenic | 25.0% |
| ! | GAATGTTTCCAAAATATAAC+TGG | - | chr1_2:48493572-48493591 | Msa0074200:CDS | 25.0% |
| ! | GAAAGGAATTTCTTATACAT+AGG | + | chr1_2:48493682-48493701 | None:intergenic | 25.0% |
| ! | CAATCATTGGAAATATTGAA+AGG | + | chr1_2:48493699-48493718 | None:intergenic | 25.0% |
| !!! | ATTGATTTGAACACAATCAT+TGG | + | chr1_2:48493712-48493731 | None:intergenic | 25.0% |
| ! | ACTCACTTTATATTCCATTA+AGG | - | chr1_2:48493842-48493861 | Msa0074200:CDS | 25.0% |
| ! | GATTTGTGTTTCTTAGAATA+TGG | - | chr1_2:48494186-48494205 | Msa0074200:intron | 25.0% |
| !! | CTCAAGTTCTACTATTTTAT+CGG | + | chr1_2:48494464-48494483 | None:intergenic | 25.0% |
| ! | TTTATAGGAAAATAAGAGCA+AGG | + | chr1_2:48494624-48494643 | None:intergenic | 25.0% |
| ! | CAGGAATGAGTTTAATATAA+TGG | + | chr1_2:48494915-48494934 | None:intergenic | 25.0% |
| ! | ATAAGTAATATGCGAAAAAC+AGG | - | chr1_2:48494951-48494970 | Msa0074200:intron | 25.0% |
| GAAGAAATAGCGAAATGTTA+GGG | + | chr1_2:48487278-48487297 | None:intergenic | 30.0% | |
| TGAAGAAATAGCGAAATGTT+AGG | + | chr1_2:48487279-48487298 | None:intergenic | 30.0% | |
| TATGAGTTAACGATGATGAT+CGG | + | chr1_2:48487376-48487395 | None:intergenic | 30.0% | |
| ! | TTTTCAGAGTGAAAAGCAAT+GGG | - | chr1_2:48487492-48487511 | Msa0074200:intron | 30.0% |
| CATTTAACATGTACATTACC+TGG | + | chr1_2:48487588-48487607 | None:intergenic | 30.0% | |
| ATATTTCTTGTCGGATATGA+AGG | - | chr1_2:48487708-48487727 | Msa0074200:intron | 30.0% | |
| ! | AGAGTATTCCTTAATCTACA+AGG | - | chr1_2:48487848-48487867 | Msa0074200:intron | 30.0% |
| GATAGTTACCTTGTAGATTA+AGG | + | chr1_2:48487859-48487878 | None:intergenic | 30.0% | |
| GTATTTATCATATCAGGAAG+AGG | - | chr1_2:48488108-48488127 | Msa0074200:intron | 30.0% | |
| AATGCAGACATAATTAGTGA+AGG | - | chr1_2:48488334-48488353 | Msa0074200:intron | 30.0% | |
| AAGGAAATGATTCAAGTAAG+AGG | - | chr1_2:48488353-48488372 | Msa0074200:intron | 30.0% | |
| CCTTCTTTGTTAACTCTATT+TGG | + | chr1_2:48488418-48488437 | None:intergenic | 30.0% | |
| CCAAATAGAGTTAACAAAGA+AGG | - | chr1_2:48488415-48488434 | Msa0074200:intron | 30.0% | |
| ATAAAAGAAGTTACTGATCC+TGG | - | chr1_2:48488475-48488494 | Msa0074200:intron | 30.0% | |
| TAAAAGAAGTTACTGATCCT+GGG | - | chr1_2:48488476-48488495 | Msa0074200:intron | 30.0% | |
| TACAGCAAATAATTCTGCAA+AGG | - | chr1_2:48488552-48488571 | Msa0074200:intron | 30.0% | |
| AGAGCTCAATATTTCTTCAA+TGG | + | chr1_2:48488650-48488669 | None:intergenic | 30.0% | |
| ! | GTTAAATCATTTTCTTCCCT+TGG | + | chr1_2:48488829-48488848 | None:intergenic | 30.0% |
| AATATTGTATAGTGTAGGGA+AGG | + | chr1_2:48489001-48489020 | None:intergenic | 30.0% | |
| CAGCAATATTGTATAGTGTA+GGG | + | chr1_2:48489005-48489024 | None:intergenic | 30.0% | |
| ACAGCAATATTGTATAGTGT+AGG | + | chr1_2:48489006-48489025 | None:intergenic | 30.0% | |
| ! | CTATACAATATTGCTGTTAC+AGG | - | chr1_2:48489009-48489028 | Msa0074200:intron | 30.0% |
| ! | GGAAAATGCTATTTAGTCTA+AGG | + | chr1_2:48489262-48489281 | None:intergenic | 30.0% |
| ! | AAATAGCATTTTCCATTCTC+AGG | - | chr1_2:48489268-48489287 | Msa0074200:intron | 30.0% |
| AAGGAAAATACTTGTTTGGA+GGG | + | chr1_2:48489501-48489520 | None:intergenic | 30.0% | |
| TTGCAAGGAAAATACTTGTT+TGG | + | chr1_2:48489505-48489524 | None:intergenic | 30.0% | |
| ! | AAACAAGTATTTTCCTTGCA+AGG | - | chr1_2:48489504-48489523 | Msa0074200:intron | 30.0% |
| CAATTTCTTTATTCCTTGCA+AGG | + | chr1_2:48489520-48489539 | None:intergenic | 30.0% | |
| CTATAATGTCCAGAAACTTA+TGG | - | chr1_2:48489568-48489587 | Msa0074200:intron | 30.0% | |
| TGCTGTAAATAAAAACAGCA+AGG | + | chr1_2:48489689-48489708 | None:intergenic | 30.0% | |
| GAAAATTAGACTCTGGATTT+AGG | + | chr1_2:48489735-48489754 | None:intergenic | 30.0% | |
| TTTGCAAACTAGATAACAAG+TGG | + | chr1_2:48489770-48489789 | None:intergenic | 30.0% | |
| CTATGTCATATAACTGATCA+TGG | - | chr1_2:48489790-48489809 | Msa0074200:intron | 30.0% | |
| TTCCTTTCAAGAACTACAAA+AGG | - | chr1_2:48489817-48489836 | Msa0074200:intron | 30.0% | |
| ! | GTAAAACTGGTAACTTCTTT+TGG | - | chr1_2:48489862-48489881 | Msa0074200:intron | 30.0% |
| ! | TTTCTAAAGGACTTATGTTC+TGG | - | chr1_2:48489934-48489953 | Msa0074200:intron | 30.0% |
| ! | TGGAAAATGAAAAGCACAAT+CGG | - | chr1_2:48489954-48489973 | Msa0074200:intron | 30.0% |
| ! | TATTTTTCTGAGCTATGGAT+AGG | - | chr1_2:48490006-48490025 | Msa0074200:intron | 30.0% |
| !! | AAGGTTTAGAATAGCTTTTG+AGG | - | chr1_2:48490041-48490060 | Msa0074200:intron | 30.0% |
| AACTTCCATCAATTGTCTTA+TGG | - | chr1_2:48490325-48490344 | Msa0074200:CDS | 30.0% | |
| GTCTATTTATGACTGCATAT+TGG | - | chr1_2:48490386-48490405 | Msa0074200:CDS | 30.0% | |
| ATTTATGACTGCATATTGGT+TGG | - | chr1_2:48490390-48490409 | Msa0074200:CDS | 30.0% | |
| ! | TCATGTTGGTAAAAAACTAG+GGG | + | chr1_2:48490489-48490508 | None:intergenic | 30.0% |
| !! | TATTTTGGGAAACACTAGTT+AGG | + | chr1_2:48490591-48490610 | None:intergenic | 30.0% |
| ATCTGGAAAACAGAAATTCT+TGG | + | chr1_2:48490622-48490641 | None:intergenic | 30.0% | |
| !! | AGTTAGTTTGCAGTCAATAA+GGG | + | chr1_2:48490661-48490680 | None:intergenic | 30.0% |
| !! | TAGTTAGTTTGCAGTCAATA+AGG | + | chr1_2:48490662-48490681 | None:intergenic | 30.0% |
| ! | GTAGGAAAATAGAGCTTTAA+AGG | + | chr1_2:48490746-48490765 | None:intergenic | 30.0% |
| TGTTACAGAAGAAATAAGCA+GGG | + | chr1_2:48490771-48490790 | None:intergenic | 30.0% | |
| GTAACACAAACCTTCTTTAT+TGG | - | chr1_2:48490785-48490804 | Msa0074200:intron | 30.0% | |
| GGATGTTTACTATCAATACT+TGG | - | chr1_2:48490806-48490825 | Msa0074200:intron | 30.0% | |
| ATGATTATCAAATCTGACTC+AGG | + | chr1_2:48491010-48491029 | None:intergenic | 30.0% | |
| !!! | ATAGAAGCTTTTAACTTGTC+AGG | - | chr1_2:48491069-48491088 | Msa0074200:CDS | 30.0% |
| GATAAATACGAACCAAGTTT+AGG | + | chr1_2:48491136-48491155 | None:intergenic | 30.0% | |
| TCTTTATGAACATGATTCCA+TGG | - | chr1_2:48491307-48491326 | Msa0074200:intron | 30.0% | |
| CTTTATGAACATGATTCCAT+GGG | - | chr1_2:48491308-48491327 | Msa0074200:intron | 30.0% | |
| ! | AATATTTTACCACTTTCCCA+TGG | + | chr1_2:48491327-48491346 | None:intergenic | 30.0% |
| ! | CATCTTAGTTATTCGAGTTT+GGG | - | chr1_2:48491427-48491446 | Msa0074200:intron | 30.0% |
| ACTCAGAAATAGAAAAACAC+AGG | + | chr1_2:48491529-48491548 | None:intergenic | 30.0% | |
| ! | TAATATCTAAAACAGACGGT+CGG | + | chr1_2:48491795-48491814 | None:intergenic | 30.0% |
| ATAGAAGAAAGGTCAAAGAA+AGG | - | chr1_2:48491814-48491833 | Msa0074200:intron | 30.0% | |
| !! | CGAGTTTTTAAAGATTCCAA+AGG | - | chr1_2:48491838-48491857 | Msa0074200:intron | 30.0% |
| GATTTAAAAGGGACTAGAAT+AGG | - | chr1_2:48492365-48492384 | Msa0074200:intron | 30.0% | |
| TTAAAAAATGCTTGCTCCAT+AGG | - | chr1_2:48492501-48492520 | Msa0074200:intron | 30.0% | |
| TAAAAAATGCTTGCTCCATA+GGG | - | chr1_2:48492502-48492521 | Msa0074200:intron | 30.0% | |
| !!! | TGCGTTGAACTTTATTTTTG+GGG | - | chr1_2:48492916-48492935 | Msa0074200:intron | 30.0% |
| TTACATTGCATATGCATAGT+TGG | - | chr1_2:48492973-48492992 | Msa0074200:intron | 30.0% | |
| ATGAAGAGTTGCACAATAAT+GGG | + | chr1_2:48493204-48493223 | None:intergenic | 30.0% | |
| TATGAAGAGTTGCACAATAA+TGG | + | chr1_2:48493205-48493224 | None:intergenic | 30.0% | |
| ATAATAAAGCAACCGTCTAT+AGG | + | chr1_2:48493372-48493391 | None:intergenic | 30.0% | |
| ACTAAGAGTTGCACAATAAT+GGG | + | chr1_2:48493397-48493416 | None:intergenic | 30.0% | |
| AACTAAGAGTTGCACAATAA+TGG | + | chr1_2:48493398-48493417 | None:intergenic | 30.0% | |
| !!! | ATGATTAACAGCTTTTTTGC+AGG | - | chr1_2:48493421-48493440 | Msa0074200:CDS | 30.0% |
| TCCAAAATATAACTGGATGA+AGG | - | chr1_2:48493579-48493598 | Msa0074200:CDS | 30.0% | |
| ! | TCCTTCATCCAGTTATATTT+TGG | + | chr1_2:48493583-48493602 | None:intergenic | 30.0% |
| ! | TATTTCCAAACTCAGTTTTG+GGG | + | chr1_2:48493735-48493754 | None:intergenic | 30.0% |
| ! | CTATTTCCAAACTCAGTTTT+GGG | + | chr1_2:48493736-48493755 | None:intergenic | 30.0% |
| ! | ACTATTTCCAAACTCAGTTT+TGG | + | chr1_2:48493737-48493756 | None:intergenic | 30.0% |
| AGTAACATGGGTAATGAAAA+GGG | + | chr1_2:48493950-48493969 | None:intergenic | 30.0% | |
| AAGTAACATGGGTAATGAAA+AGG | + | chr1_2:48493951-48493970 | None:intergenic | 30.0% | |
| ATATGAAACACACATGGAAA+TGG | + | chr1_2:48494033-48494052 | None:intergenic | 30.0% | |
| TTCAAGATATGAAACACACA+TGG | + | chr1_2:48494039-48494058 | None:intergenic | 30.0% | |
| TGTTTCTTAGAATATGGACT+AGG | - | chr1_2:48494192-48494211 | Msa0074200:intron | 30.0% | |
| ! | CACTATAGATTTTCCATCTT+GGG | + | chr1_2:48494329-48494348 | None:intergenic | 30.0% |
| ! | ACACTATAGATTTTCCATCT+TGG | + | chr1_2:48494330-48494349 | None:intergenic | 30.0% |
| AAGATGGAAAATCTATAGTG+TGG | - | chr1_2:48494329-48494348 | Msa0074200:CDS | 30.0% | |
| GGCCTGATAAAAAAAAATCT+AGG | - | chr1_2:48494431-48494450 | Msa0074200:intron | 30.0% | |
| AAAATAGTAGAACTTGAGCT+AGG | - | chr1_2:48494466-48494485 | Msa0074200:intron | 30.0% | |
| GCACCATGAAGTATATTTAT+AGG | + | chr1_2:48494639-48494658 | None:intergenic | 30.0% | |
| ! | GAAGTTAGTCTGATTAATGA+AGG | - | chr1_2:48494675-48494694 | Msa0074200:CDS | 30.0% |
| TATACTAATATGTGTGCTTC+AGG | + | chr1_2:48494934-48494953 | None:intergenic | 30.0% | |
| ATTGTGGAGGAAATTGAAAG+TGG | + | chr1_2:48487198-48487217 | None:intergenic | 35.0% | |
| TGTATGATTCGAAATTGTGG+AGG | + | chr1_2:48487211-48487230 | None:intergenic | 35.0% | |
| TCCACAATTTCGAATCATAC+AGG | - | chr1_2:48487210-48487229 | Msa0074200:intron | 35.0% | |
| ACCTGTATGATTCGAAATTG+TGG | + | chr1_2:48487214-48487233 | None:intergenic | 35.0% | |
| ACGCTTTAATGCATGAAATG+TGG | - | chr1_2:48487442-48487461 | Msa0074200:intron | 35.0% | |
| ! | GTTTTCAGAGTGAAAAGCAA+TGG | - | chr1_2:48487491-48487510 | Msa0074200:intron | 35.0% |
| TCATGTGTATGCATGTTTAC+AGG | - | chr1_2:48487778-48487797 | Msa0074200:intron | 35.0% | |
| CATGTGTATGCATGTTTACA+GGG | - | chr1_2:48487779-48487798 | Msa0074200:intron | 35.0% | |
| CATGTTTACAGGGATTCTTA+TGG | - | chr1_2:48487789-48487808 | Msa0074200:intron | 35.0% | |
| CTATATCTTTGTGCGTATTG+AGG | + | chr1_2:48487828-48487847 | None:intergenic | 35.0% | |
| TATCCTTTGTGCTTCACTTT+GGG | - | chr1_2:48487875-48487894 | Msa0074200:intron | 35.0% | |
| ATTCTTCTATAGATGGAAGG+TGG | + | chr1_2:48488726-48488745 | None:intergenic | 35.0% | |
| CTGATTCTTCTATAGATGGA+AGG | + | chr1_2:48488729-48488748 | None:intergenic | 35.0% | |
| ! | GGTTCTGATTCTTCTATAGA+TGG | + | chr1_2:48488733-48488752 | None:intergenic | 35.0% |
| AAGAATCAGAACCTGTAGAA+GGG | - | chr1_2:48488740-48488759 | Msa0074200:intron | 35.0% | |
| TTCCATGGAGAAAAAAGTTC+TGG | + | chr1_2:48488865-48488884 | None:intergenic | 35.0% | |
| !!! | AGAACTTTTTTCTCCATGGA+AGG | - | chr1_2:48488864-48488883 | Msa0074200:intron | 35.0% |
| !! | ACTTTTTCCCCAACAAAAGT+GGG | + | chr1_2:48488971-48488990 | None:intergenic | 35.0% |
| !!! | TACTTTTTCCCCAACAAAAG+TGG | + | chr1_2:48488972-48488991 | None:intergenic | 35.0% |
| ! | CAATATTGCTGTTACAGGTA+TGG | - | chr1_2:48489014-48489033 | Msa0074200:intron | 35.0% |
| AAAATGGCAGAAATTCCTTG+AGG | - | chr1_2:48489330-48489349 | Msa0074200:intron | 35.0% | |
| AAAATACTTGTTTGGAGGGA+TGG | + | chr1_2:48489497-48489516 | None:intergenic | 35.0% | |
| CAAGGAAAATACTTGTTTGG+AGG | + | chr1_2:48489502-48489521 | None:intergenic | 35.0% | |
| GGAAAATGACCATAAGTTTC+TGG | + | chr1_2:48489580-48489599 | None:intergenic | 35.0% | |
| ! | CACCTTTTGTAGTTCTTGAA+AGG | + | chr1_2:48489822-48489841 | None:intergenic | 35.0% |
| !! | AGGTGTCTTTTCATTTGTTG+AGG | - | chr1_2:48490061-48490080 | Msa0074200:intron | 35.0% |
| ACATCTGTTAATCTCTTCAC+TGG | - | chr1_2:48490084-48490103 | Msa0074200:intron | 35.0% | |
| ! | TTCTTCATCATTGCTGTTGT+TGG | - | chr1_2:48490112-48490131 | Msa0074200:intron | 35.0% |
| !!! | TACCAAAAGGCATTTTCTTC+TGG | + | chr1_2:48490230-48490249 | None:intergenic | 35.0% |
| ! | AGAAGAAAATGCCTTTTGGT+AGG | - | chr1_2:48490229-48490248 | Msa0074200:CDS | 35.0% |
| GGGAAATATAAGGCAAGTTT+CGG | + | chr1_2:48490258-48490277 | None:intergenic | 35.0% | |
| AGTTGCCATAAGACAATTGA+TGG | + | chr1_2:48490333-48490352 | None:intergenic | 35.0% | |
| TGGTAAAAAACTAGGGGTTA+AGG | + | chr1_2:48490483-48490502 | None:intergenic | 35.0% | |
| !! | TTAGTTTGCAGTCAATAAGG+GGG | + | chr1_2:48490659-48490678 | None:intergenic | 35.0% |
| !! | GTTAGTTTGCAGTCAATAAG+GGG | + | chr1_2:48490660-48490679 | None:intergenic | 35.0% |
| TAATTGTAGTAGAGCAGCAT+AGG | + | chr1_2:48490717-48490736 | None:intergenic | 35.0% | |
| GTGTTACAGAAGAAATAAGC+AGG | + | chr1_2:48490772-48490791 | None:intergenic | 35.0% | |
| !! | TAGGATCTGATTTGTTGTAC+TGG | - | chr1_2:48490849-48490868 | Msa0074200:intron | 35.0% |
| ! | TTGTTGTACTGGTATAACTC+AGG | - | chr1_2:48490860-48490879 | Msa0074200:CDS | 35.0% |
| AGAAGAAATGATAGAATCCC+AGG | - | chr1_2:48490927-48490946 | Msa0074200:intron | 35.0% | |
| CATAAGTTAGATTCACACCT+GGG | + | chr1_2:48490947-48490966 | None:intergenic | 35.0% | |
| ACATAAGTTAGATTCACACC+TGG | + | chr1_2:48490948-48490967 | None:intergenic | 35.0% | |
| CGTGAAAGATTTCCTAAACT+TGG | - | chr1_2:48491121-48491140 | Msa0074200:intron | 35.0% | |
| ATTGTGTCAATGAATCAGCT+TGG | - | chr1_2:48491184-48491203 | Msa0074200:intron | 35.0% | |
| TTGTGTCAATGAATCAGCTT+GGG | - | chr1_2:48491185-48491204 | Msa0074200:intron | 35.0% | |
| AGATGCAGAAACACATCAAA+AGG | + | chr1_2:48491412-48491431 | None:intergenic | 35.0% | |
| ! | GCATCTTAGTTATTCGAGTT+TGG | - | chr1_2:48491426-48491445 | Msa0074200:intron | 35.0% |
| CTGTTCGAAATAGCATAACA+CGG | + | chr1_2:48491475-48491494 | None:intergenic | 35.0% | |
| !! | CTGGCTCTAATGGAATTATA+TGG | - | chr1_2:48491497-48491516 | Msa0074200:intron | 35.0% |
| TCTGTTGTTGTAACTAATGC+AGG | + | chr1_2:48491640-48491659 | None:intergenic | 35.0% | |
| TTAGTTACAACAACAGATGC+AGG | - | chr1_2:48491643-48491662 | Msa0074200:intron | 35.0% | |
| !! | GTTAACCTGATAGTGGTAAA+AGG | - | chr1_2:48492235-48492254 | Msa0074200:intron | 35.0% |
| AATCTGTATTATCAAGCGTG+AGG | - | chr1_2:48492287-48492306 | Msa0074200:intron | 35.0% | |
| ATCTGTATTATCAAGCGTGA+GGG | - | chr1_2:48492288-48492307 | Msa0074200:intron | 35.0% | |
| TGAGATATAGCATTTGACTC+AGG | - | chr1_2:48492331-48492350 | Msa0074200:intron | 35.0% | |
| TAAAAGGGACTAGAATAGGA+TGG | - | chr1_2:48492369-48492388 | Msa0074200:intron | 35.0% | |
| ATGGTATTAGATTGCAATGC+TGG | - | chr1_2:48492388-48492407 | Msa0074200:intron | 35.0% | |
| AGATCATTGTGCACACTATT+TGG | - | chr1_2:48492684-48492703 | Msa0074200:intron | 35.0% | |
| !!! | ATTAACAGCTTTTTTGCAGG+TGG | - | chr1_2:48493424-48493443 | Msa0074200:CDS | 35.0% |
| !! | TAGGCTTTGAATTACTCCAA+TGG | + | chr1_2:48493663-48493682 | None:intergenic | 35.0% |
| TTGAAAATGGGTCAACGATA+CGG | + | chr1_2:48493804-48493823 | None:intergenic | 35.0% | |
| TACAAGCAAGAAGACCTTAA+TGG | + | chr1_2:48493859-48493878 | None:intergenic | 35.0% | |
| GTAACATGGGTAATGAAAAG+GGG | + | chr1_2:48493949-48493968 | None:intergenic | 35.0% | |
| AACACACATGGAAATGGATA+AGG | + | chr1_2:48494027-48494046 | None:intergenic | 35.0% | |
| ! | AGAAACAGCTCTAATGGAAA+AGG | - | chr1_2:48494074-48494093 | Msa0074200:intron | 35.0% |
| AGGATTGTTCAAAGCTTACA+AGG | - | chr1_2:48494249-48494268 | Msa0074200:intron | 35.0% | |
| TTTCCATCTTGGGTATCAAA+GGG | + | chr1_2:48494319-48494338 | None:intergenic | 35.0% | |
| ! | TTTTCCATCTTGGGTATCAA+AGG | + | chr1_2:48494320-48494339 | None:intergenic | 35.0% |
| ATCTATAGTGTGGACAAATG+TGG | - | chr1_2:48494339-48494358 | Msa0074200:CDS | 35.0% | |
| TCTATAGTGTGGACAAATGT+GGG | - | chr1_2:48494340-48494359 | Msa0074200:CDS | 35.0% | |
| !! | ATGTGAAGAGGTGTTGTTAT+TGG | + | chr1_2:48494370-48494389 | None:intergenic | 35.0% |
| CTAGATATGTAGATAGAGAG+TGG | - | chr1_2:48494396-48494415 | Msa0074200:intron | 35.0% | |
| AGATAGAGAGTGGACAAATA+CGG | - | chr1_2:48494406-48494425 | Msa0074200:intron | 35.0% | |
| AAAGGCTATGCCAATCTAAA+CGG | + | chr1_2:48494516-48494535 | None:intergenic | 35.0% | |
| !! | GCCTTTTGAGGACTATATTT+TGG | - | chr1_2:48494530-48494549 | Msa0074200:intron | 35.0% |
| GCCAAAATATAGTCCTCAAA+AGG | + | chr1_2:48494534-48494553 | None:intergenic | 35.0% | |
| !!! | CTATATTTTGGCCATATCTC+TGG | - | chr1_2:48494542-48494561 | Msa0074200:intron | 35.0% |
| ATCCACATAAACCAGAGATA+TGG | + | chr1_2:48494556-48494575 | None:intergenic | 35.0% | |
| ATACTTCATGGTGCAAAAAG+TGG | - | chr1_2:48494645-48494664 | Msa0074200:CDS | 35.0% | |
| !! | TGTTTTTATGGTTTCTCCTC+AGG | + | chr1_2:48494719-48494738 | None:intergenic | 35.0% |
| ATAGATCCCAATGTATTGCT+TGG | - | chr1_2:48494768-48494787 | Msa0074200:intron | 35.0% | |
| TATGGACCAAGCAATACATT+GGG | + | chr1_2:48494777-48494796 | None:intergenic | 35.0% | |
| ATATGGACCAAGCAATACAT+TGG | + | chr1_2:48494778-48494797 | None:intergenic | 35.0% | |
| ATATAGCTAACTCCATCCAA+GGG | - | chr1_2:48494794-48494813 | Msa0074200:intron | 35.0% | |
| GTAATATGCGAAAAACAGGA+AGG | - | chr1_2:48494955-48494974 | Msa0074200:intron | 35.0% | |
| AGTTAACGATGATGATCGGA+AGG | + | chr1_2:48487372-48487391 | None:intergenic | 40.0% | |
| CAACGTACGCTTACTTAACA+AGG | + | chr1_2:48487555-48487574 | None:intergenic | 40.0% | |
| CTTGTTAAGTAAGCGTACGT+TGG | - | chr1_2:48487553-48487572 | Msa0074200:intron | 40.0% | |
| TTCTTGTCGGATATGAAGGA+AGG | - | chr1_2:48487712-48487731 | Msa0074200:intron | 40.0% | |
| CTATCCTTTGTGCTTCACTT+TGG | - | chr1_2:48487874-48487893 | Msa0074200:intron | 40.0% | |
| AAACCCAAAGTGAAGCACAA+AGG | + | chr1_2:48487881-48487900 | None:intergenic | 40.0% | |
| ATTGAAAGCTGAAAGTAGCG+AGG | - | chr1_2:48488222-48488241 | Msa0074200:intron | 40.0% | |
| AAGTAGCGAGGTAAAAGAAG+AGG | - | chr1_2:48488234-48488253 | Msa0074200:intron | 40.0% | |
| AGTAGCGAGGTAAAAGAAGA+GGG | - | chr1_2:48488235-48488254 | Msa0074200:intron | 40.0% | |
| ACTCCTCATAGGGTAAGTAA+CGG | - | chr1_2:48488259-48488278 | Msa0074200:intron | 40.0% | |
| GCATTTGTCTCTTCTACCTT+TGG | + | chr1_2:48488319-48488338 | None:intergenic | 40.0% | |
| TCTTCAATGGCACTAAGAGA+TGG | + | chr1_2:48488637-48488656 | None:intergenic | 40.0% | |
| GAAGAATCAGAACCTGTAGA+AGG | - | chr1_2:48488739-48488758 | Msa0074200:intron | 40.0% | |
| AGAATCAGAACCTGTAGAAG+GGG | - | chr1_2:48488741-48488760 | Msa0074200:intron | 40.0% | |
| GCTCCTAAGGAAGATATTCA+GGG | - | chr1_2:48488763-48488782 | Msa0074200:intron | 40.0% | |
| TCTCCCTGAATATCTTCCTT+AGG | + | chr1_2:48488769-48488788 | None:intergenic | 40.0% | |
| TAAGGAAGATATTCAGGGAG+AGG | - | chr1_2:48488768-48488787 | Msa0074200:intron | 40.0% | |
| TGCACTAATGAGACACTAGA+TGG | - | chr1_2:48488793-48488812 | Msa0074200:intron | 40.0% | |
| ACTAATGAGACACTAGATGG+TGG | - | chr1_2:48488796-48488815 | Msa0074200:intron | 40.0% | |
| !!! | TGCCAGAACTTTTTTCTCCA+TGG | - | chr1_2:48488860-48488879 | Msa0074200:intron | 40.0% |
| ! | TTTTTCTCCATGGAAGGAAC+TGG | - | chr1_2:48488870-48488889 | Msa0074200:intron | 40.0% |
| GAACTGGAGTTTCTTGTTCA+GGG | - | chr1_2:48488886-48488905 | Msa0074200:intron | 40.0% | |
| !! | ACTCAAGTTCCCACTTTTGT+TGG | - | chr1_2:48488959-48488978 | Msa0074200:intron | 40.0% |
| !! | CTCAAGTTCCCACTTTTGTT+GGG | - | chr1_2:48488960-48488979 | Msa0074200:intron | 40.0% |
| !! | TCAAGTTCCCACTTTTGTTG+GGG | - | chr1_2:48488961-48488980 | Msa0074200:intron | 40.0% |
| CAAGAAACTAACAGTTGCGA+AGG | - | chr1_2:48489097-48489116 | Msa0074200:intron | 40.0% | |
| ATGGAGAAAGCAGATTGAGA+AGG | - | chr1_2:48489156-48489175 | Msa0074200:intron | 40.0% | |
| !! | ATATTTTTACGGAGCGAGAG+AGG | + | chr1_2:48489643-48489662 | None:intergenic | 40.0% |
| TCTGTTAATCTCTTCACTGG+TGG | - | chr1_2:48490087-48490106 | Msa0074200:intron | 40.0% | |
| ! | TGCCAGAAGAAAATGCCTTT+TGG | - | chr1_2:48490225-48490244 | Msa0074200:CDS | 40.0% |
| AGTTTCGGAAACCTACCAAA+AGG | + | chr1_2:48490243-48490262 | None:intergenic | 40.0% | |
| GACTGACAAGGGGAAATATA+AGG | + | chr1_2:48490268-48490287 | None:intergenic | 40.0% | |
| CCTCTGTTTGTGTATCATGT+TGG | + | chr1_2:48490503-48490522 | None:intergenic | 40.0% | |
| CCAACATGATACACAAACAG+AGG | - | chr1_2:48490500-48490519 | Msa0074200:CDS | 40.0% | |
| TGATACACAAACAGAGGTCA+AGG | - | chr1_2:48490506-48490525 | Msa0074200:CDS | 40.0% | |
| GGGAGGTAGTTACATAAATC+TGG | + | chr1_2:48490639-48490658 | None:intergenic | 40.0% | |
| GAAGAAATAAGCAGGGAAGT+AGG | + | chr1_2:48490764-48490783 | None:intergenic | 40.0% | |
| GTATAACTCAGGACATTCGT+TGG | - | chr1_2:48490871-48490890 | Msa0074200:CDS | 40.0% | |
| TCAAATCTGACTCAGGAATC+AGG | + | chr1_2:48491003-48491022 | None:intergenic | 40.0% | |
| AGCTTCTATGAGTCTGTGAA+TGG | + | chr1_2:48491058-48491077 | None:intergenic | 40.0% | |
| !!! | GAAGCTTTTAACTTGTCAGG+TGG | - | chr1_2:48491072-48491091 | Msa0074200:CDS | 40.0% |
| TCAATTCCTCAAAAACGAGC+TGG | + | chr1_2:48491099-48491118 | None:intergenic | 40.0% | |
| AACATGATTCCATGGGAAAG+TGG | - | chr1_2:48491315-48491334 | Msa0074200:intron | 40.0% | |
| ! | TGGGATGTTCTGCTATTTGA+AGG | - | chr1_2:48491446-48491465 | Msa0074200:intron | 40.0% |
| ACTCTATTGCAATCACTTGC+TGG | - | chr1_2:48491676-48491695 | Msa0074200:intron | 40.0% | |
| CTTGTCCTTACTGCTTGTAT+GGG | - | chr1_2:48491721-48491740 | Msa0074200:intron | 40.0% | |
| TATAGTTTCAAGCATGACCC+AGG | - | chr1_2:48491877-48491896 | Msa0074200:intron | 40.0% | |
| ATAGTTTCAAGCATGACCCA+GGG | - | chr1_2:48491878-48491897 | Msa0074200:intron | 40.0% | |
| ACCTAATGACAATGGCGATA+TGG | - | chr1_2:48491921-48491940 | Msa0074200:intron | 40.0% | |
| ACCATATCGCCATTGTCATT+AGG | + | chr1_2:48491925-48491944 | None:intergenic | 40.0% | |
| AGCTGATAAGAATGTGCAGT+TGG | - | chr1_2:48491945-48491964 | Msa0074200:CDS | 40.0% | |
| TAAGAATGTGCAGTTGGACT+TGG | - | chr1_2:48491951-48491970 | Msa0074200:CDS | 40.0% | |
| CCACTTTGGCATCAATATTG+AGG | + | chr1_2:48492014-48492033 | None:intergenic | 40.0% | |
| CCTCAATATTGATGCCAAAG+TGG | - | chr1_2:48492011-48492030 | Msa0074200:intron | 40.0% | |
| !!! | GATAGCCTCTGTTTTTGCAA+GGG | + | chr1_2:48492096-48492115 | None:intergenic | 40.0% |
| ACAAAACAGACACGTCTTGA+AGG | + | chr1_2:48492195-48492214 | None:intergenic | 40.0% | |
| GTCATGTTCTATCTTGAGTC+AGG | - | chr1_2:48492213-48492232 | Msa0074200:intron | 40.0% | |
| ! | GCAAACCTTTTACCACTATC+AGG | + | chr1_2:48492243-48492262 | None:intergenic | 40.0% |
| AATGGAGGATCACTATGTCA+CGG | - | chr1_2:48492803-48492822 | Msa0074200:CDS | 40.0% | |
| !!! | ACTTTATTTTTGGGGTCGTG+TGG | - | chr1_2:48492924-48492943 | Msa0074200:intron | 40.0% |
| !!! | CTTTATTTTTGGGGTCGTGT+GGG | - | chr1_2:48492925-48492944 | Msa0074200:intron | 40.0% |
| !! | ATATGCATAGTTGGTAGCGT+AGG | - | chr1_2:48492982-48493001 | Msa0074200:intron | 40.0% |
| CGTGACTCAAATCTTCTTGA+TGG | - | chr1_2:48493012-48493031 | Msa0074200:CDS | 40.0% | |
| AGAAAAGATCTGCCATACTC+AGG | - | chr1_2:48493483-48493502 | Msa0074200:CDS | 40.0% | |
| CTGGCAACTTTATATGTAGC+AGG | + | chr1_2:48493553-48493572 | None:intergenic | 40.0% | |
| TCAATCCCCAAAACTGAGTT+TGG | - | chr1_2:48493727-48493746 | Msa0074200:CDS | 40.0% | |
| !! | TAGAGCTGTTTCTAGTTCCT+CGG | + | chr1_2:48494067-48494086 | None:intergenic | 40.0% |
| ! | GGAACTAGAAACAGCTCTAA+TGG | - | chr1_2:48494068-48494087 | Msa0074200:intron | 40.0% |
| ! | AGCTCTAATGGAAAAGGTGA+AGG | - | chr1_2:48494080-48494099 | Msa0074200:intron | 40.0% |
| !!! | CTAGCTTTTGGAATTGAGTC+AGG | + | chr1_2:48494218-48494237 | None:intergenic | 40.0% |
| ATTCCAAAAGCTAGCTCAAG+AGG | - | chr1_2:48494224-48494243 | Msa0074200:intron | 40.0% | |
| TCCTACTTCGACAAGAAACA+TGG | + | chr1_2:48494285-48494304 | None:intergenic | 40.0% | |
| TTCCATCTTGGGTATCAAAG+GGG | + | chr1_2:48494318-48494337 | None:intergenic | 40.0% | |
| !! | ATCTAGCTCTAGATGTGAAG+AGG | + | chr1_2:48494382-48494401 | None:intergenic | 40.0% |
| AGAAGCTAACCCGTTTAGAT+TGG | - | chr1_2:48494503-48494522 | Msa0074200:intron | 40.0% | |
| AAGGCTATGCCAATCTAAAC+GGG | + | chr1_2:48494515-48494534 | None:intergenic | 40.0% | |
| ! | TAGATTGGCATAGCCTTTTG+AGG | - | chr1_2:48494518-48494537 | Msa0074200:intron | 40.0% |
| TGGTGCAAAAAGTGGATCAA+TGG | - | chr1_2:48494653-48494672 | Msa0074200:CDS | 40.0% | |
| GAAGAAGACTAGAAAACCTG+AGG | - | chr1_2:48494700-48494719 | Msa0074200:intron | 40.0% | |
| CTTGGATGGAGTTAGCTATA+TGG | + | chr1_2:48494795-48494814 | None:intergenic | 40.0% | |
| CATATAGCTAACTCCATCCA+AGG | - | chr1_2:48494793-48494812 | Msa0074200:intron | 40.0% | |
| ACAACCAAGTTTAGTACCCT+TGG | + | chr1_2:48494813-48494832 | None:intergenic | 40.0% | |
| GTATTGAGACGCGTGGAAAT+GGG | + | chr1_2:48487256-48487275 | None:intergenic | 45.0% | |
| GTTAAGTAAGCGTACGTTGG+AGG | - | chr1_2:48487556-48487575 | Msa0074200:intron | 45.0% | |
| GATATGAAGGAAGGAGACTG+TGG | - | chr1_2:48487721-48487740 | Msa0074200:intron | 45.0% | |
| AAGAAGAGGGAACTCCTCAT+AGG | - | chr1_2:48488248-48488267 | Msa0074200:intron | 45.0% | |
| AGAAGAGGGAACTCCTCATA+GGG | - | chr1_2:48488249-48488268 | Msa0074200:intron | 45.0% | |
| CTCCTCATAGGGTAAGTAAC+GGG | - | chr1_2:48488260-48488279 | Msa0074200:intron | 45.0% | |
| TCCTCATAGGGTAAGTAACG+GGG | - | chr1_2:48488261-48488280 | Msa0074200:intron | 45.0% | |
| CTCTTCTACCTTTGGACTGT+CGG | + | chr1_2:48488311-48488330 | None:intergenic | 45.0% | |
| AAGAAGTTACTGATCCTGGG+AGG | - | chr1_2:48488479-48488498 | Msa0074200:intron | 45.0% | |
| AGAAGTTACTGATCCTGGGA+GGG | - | chr1_2:48488480-48488499 | Msa0074200:intron | 45.0% | |
| ACTTGAATCATCCCCTTCAC+TGG | + | chr1_2:48488506-48488525 | None:intergenic | 45.0% | |
| TGCAAAGGAGCTACACCATT+CGG | - | chr1_2:48488567-48488586 | Msa0074200:intron | 45.0% | |
| GGGTCTTTCTTTCTTCCGAA+TGG | + | chr1_2:48488585-48488604 | None:intergenic | 45.0% | |
| GGAAGAAAGAAAGACCCGTA+AGG | - | chr1_2:48488588-48488607 | Msa0074200:intron | 45.0% | |
| ! | TAGACCAGCGTTGAACCTTA+CGG | + | chr1_2:48488606-48488625 | None:intergenic | 45.0% |
| TTGAGCTCTCGTGTCAAGAA+AGG | - | chr1_2:48488661-48488680 | Msa0074200:intron | 45.0% | |
| GGCTCCTAAGGAAGATATTC+AGG | - | chr1_2:48488762-48488781 | Msa0074200:intron | 45.0% | |
| AGAAACTCCAGTTCCTTCCA+TGG | + | chr1_2:48488880-48488899 | None:intergenic | 45.0% | |
| GGAACTGGAGTTTCTTGTTC+AGG | - | chr1_2:48488885-48488904 | Msa0074200:intron | 45.0% | |
| !! | CCTCTCCTCTAAGATCCTTT+GGG | + | chr1_2:48488918-48488937 | None:intergenic | 45.0% |
| !! | ACCTCTCCTCTAAGATCCTT+TGG | + | chr1_2:48488919-48488938 | None:intergenic | 45.0% |
| TCGTGTGTTCACACCTACAA+AGG | + | chr1_2:48489044-48489063 | None:intergenic | 45.0% | |
| TTGTAGGTGTGAACACACGA+CGG | - | chr1_2:48489044-48489063 | Msa0074200:intron | 45.0% | |
| AACTAACAGTTGCGAAGGCA+AGG | - | chr1_2:48489102-48489121 | Msa0074200:intron | 45.0% | |
| ATGTTCTATCTGCTGCAGCA+GGG | - | chr1_2:48489131-48489150 | Msa0074200:intron | 45.0% | |
| !!! | TGCCATTTTCGTCCAAAGCA+GGG | + | chr1_2:48489319-48489338 | None:intergenic | 45.0% |
| TGCTAGTAGTAAACGCCTCA+AGG | + | chr1_2:48489348-48489367 | None:intergenic | 45.0% | |
| CAGGCAATGAACTTCTTTGC+TGG | - | chr1_2:48490185-48490204 | Msa0074200:CDS | 45.0% | |
| TTGTATAGGGGACTGACAAG+GGG | + | chr1_2:48490278-48490297 | None:intergenic | 45.0% | |
| GTTGTATAGGGGACTGACAA+GGG | + | chr1_2:48490279-48490298 | None:intergenic | 45.0% | |
| TGTTGTATAGGGGACTGACA+AGG | + | chr1_2:48490280-48490299 | None:intergenic | 45.0% | |
| ACACAAACAGAGGTCAAGGA+TGG | - | chr1_2:48490510-48490529 | Msa0074200:CDS | 45.0% | |
| !! | ATCCAGGTGTTCTAAAGACC+TGG | - | chr1_2:48490558-48490577 | Msa0074200:intron | 45.0% |
| !! | TACCAGGTCTTTAGAACACC+TGG | + | chr1_2:48490563-48490582 | None:intergenic | 45.0% |
| CACTAGTTAGGAGAGTTACC+AGG | + | chr1_2:48490579-48490598 | None:intergenic | 45.0% | |
| GAGCAGCATAGGTAACTGTT+TGG | + | chr1_2:48490706-48490725 | None:intergenic | 45.0% | |
| ! | TCTAGATTACTTGGGAGTGC+AGG | - | chr1_2:48491251-48491270 | Msa0074200:CDS | 45.0% |
| !! | TATGCTATTTCGAACAGCGC+TGG | - | chr1_2:48491478-48491497 | Msa0074200:intron | 45.0% |
| TACAAGCAGTAAGGACAAGC+TGG | + | chr1_2:48491720-48491739 | None:intergenic | 45.0% | |
| GCTTGTCCTTACTGCTTGTA+TGG | - | chr1_2:48491720-48491739 | Msa0074200:intron | 45.0% | |
| GGTAACCCATACAAGCAGTA+AGG | + | chr1_2:48491729-48491748 | None:intergenic | 45.0% | |
| CAACTTAGATGCAAGCCCTT+TGG | + | chr1_2:48491857-48491876 | None:intergenic | 45.0% | |
| TTTCTTCTACCAGTGACCCT+GGG | + | chr1_2:48491897-48491916 | None:intergenic | 45.0% | |
| ! | TTTTCTTCTACCAGTGACCC+TGG | + | chr1_2:48491898-48491917 | None:intergenic | 45.0% |
| ATCTGGTAGGGAATCCACTT+TGG | + | chr1_2:48492028-48492047 | None:intergenic | 45.0% | |
| CTGTTCATGGACATCTGGTA+GGG | + | chr1_2:48492040-48492059 | None:intergenic | 45.0% | |
| GTAACCTGTTCATGGACATC+TGG | + | chr1_2:48492045-48492064 | None:intergenic | 45.0% | |
| GAGGAGAAGTAACCTGTTCA+TGG | + | chr1_2:48492053-48492072 | None:intergenic | 45.0% | |
| ! | GTTTTTGCAAGGGAGAAGCA+AGG | + | chr1_2:48492086-48492105 | None:intergenic | 45.0% |
| CTTCTCCCTTGCAAAAACAG+AGG | - | chr1_2:48492088-48492107 | Msa0074200:intron | 45.0% | |
| !!! | GGATAGCCTCTGTTTTTGCA+AGG | + | chr1_2:48492097-48492116 | None:intergenic | 45.0% |
| GAGTCAGGTTAACCTGATAG+TGG | - | chr1_2:48492228-48492247 | Msa0074200:intron | 45.0% | |
| TTGCAATGCTGGATCTTCAG+TGG | - | chr1_2:48492399-48492418 | Msa0074200:intron | 45.0% | |
| TGCAATGCTGGATCTTCAGT+GGG | - | chr1_2:48492400-48492419 | Msa0074200:intron | 45.0% | |
| !!! | CAGCTTTTTTGCAGGTGGTT+TGG | - | chr1_2:48493429-48493448 | Msa0074200:CDS | 45.0% |
| !! | TTTGCAGGTGGTTTGGTTGA+AGG | - | chr1_2:48493436-48493455 | Msa0074200:CDS | 45.0% |
| AGCATGAGGCTAATTGCACT+GGG | + | chr1_2:48493614-48493633 | None:intergenic | 45.0% | |
| AAGCATGAGGCTAATTGCAC+TGG | + | chr1_2:48493615-48493634 | None:intergenic | 45.0% | |
| CAGCAGATAGGAGAGTAACA+GGG | + | chr1_2:48493640-48493659 | None:intergenic | 45.0% | |
| TTACTCCAATGGCAGCAGAT+AGG | + | chr1_2:48493652-48493671 | None:intergenic | 45.0% | |
| AAAATGGGTCAACGATACGG+AGG | + | chr1_2:48493801-48493820 | None:intergenic | 45.0% | |
| TCATATCTTGAACAGAGCCG+AGG | - | chr1_2:48494047-48494066 | Msa0074200:intron | 45.0% | |
| !!! | TCACCTCTTGAGCTAGCTTT+TGG | + | chr1_2:48494230-48494249 | None:intergenic | 45.0% |
| AAAAGCTAGCTCAAGAGGTG+AGG | - | chr1_2:48494229-48494248 | Msa0074200:intron | 45.0% | |
| GCCATGTTTCTTGTCGAAGT+AGG | - | chr1_2:48494281-48494300 | Msa0074200:intron | 45.0% | |
| ATAGTGTGGACAAATGTGGG+TGG | - | chr1_2:48494343-48494362 | Msa0074200:CDS | 45.0% | |
| ! | GGCCATATCTCTGGTTTATG+TGG | - | chr1_2:48494551-48494570 | Msa0074200:intron | 45.0% |
| CCAAGTTTAGTACCCTTGGA+TGG | + | chr1_2:48494809-48494828 | None:intergenic | 45.0% | |
| !! | CCATCCAAGGGTACTAAACT+TGG | - | chr1_2:48494806-48494825 | Msa0074200:intron | 45.0% |
| GACGCGTGGAAATGGGATTA+CGG | + | chr1_2:48487249-48487268 | None:intergenic | 50.0% | |
| ! | GGTATTGAGACGCGTGGAAA+TGG | + | chr1_2:48487257-48487276 | None:intergenic | 50.0% |
| !! | TGTTAGGGTATTGAGACGCG+TGG | + | chr1_2:48487263-48487282 | None:intergenic | 50.0% |
| ! | GTACGTTGGAGGTTGATTCC+AGG | - | chr1_2:48487567-48487586 | Msa0074200:intron | 50.0% |
| AGGAAGGAGACTGTGGTAGT+TGG | - | chr1_2:48487728-48487747 | Msa0074200:intron | 50.0% | |
| TCCCCGTTACTTACCCTATG+AGG | + | chr1_2:48488265-48488284 | None:intergenic | 50.0% | |
| CGGGGATGATTCAAGTAGCA+AGG | - | chr1_2:48488279-48488298 | Msa0074200:intron | 50.0% | |
| GGTTTCTTCCGACAGTCCAA+AGG | - | chr1_2:48488300-48488319 | Msa0074200:intron | 50.0% | |
| ! | AGACCAGCGTTGAACCTTAC+GGG | + | chr1_2:48488605-48488624 | None:intergenic | 50.0% |
| ! | TAGATGGTGGTAACAGCCCA+AGG | - | chr1_2:48488809-48488828 | Msa0074200:intron | 50.0% |
| ! | AGATGGTGGTAACAGCCCAA+GGG | - | chr1_2:48488810-48488829 | Msa0074200:intron | 50.0% |
| CTGGAGTTTCTTGTTCAGGG+AGG | - | chr1_2:48488889-48488908 | Msa0074200:intron | 50.0% | |
| GGAGTCCCAAAGGATCTTAG+AGG | - | chr1_2:48488910-48488929 | Msa0074200:intron | 50.0% | |
| CCCAAAGGATCTTAGAGGAG+AGG | - | chr1_2:48488915-48488934 | Msa0074200:intron | 50.0% | |
| CAGGTATGGCAAGCCTTTGT+AGG | - | chr1_2:48489028-48489047 | Msa0074200:intron | 50.0% | |
| TGTAGGTGTGAACACACGAC+GGG | - | chr1_2:48489045-48489064 | Msa0074200:intron | 50.0% | |
| GATGTTCTATCTGCTGCAGC+AGG | - | chr1_2:48489130-48489149 | Msa0074200:intron | 50.0% | |
| TATCTGCTGCAGCAGGGAAA+TGG | - | chr1_2:48489137-48489156 | Msa0074200:intron | 50.0% | |
| TTCGCGGTATGTCCTGAGAA+TGG | + | chr1_2:48489283-48489302 | None:intergenic | 50.0% | |
| ! | CACCCTGCTTTGGACGAAAA+TGG | - | chr1_2:48489314-48489333 | Msa0074200:intron | 50.0% |
| !!! | CTGCCATTTTCGTCCAAAGC+AGG | + | chr1_2:48489320-48489339 | None:intergenic | 50.0% |
| CTCGACATAACCCCTCTGTT+GGG | - | chr1_2:48489372-48489391 | Msa0074200:intron | 50.0% | |
| ACCTGACAGTACCCAACAGA+GGG | + | chr1_2:48489386-48489405 | None:intergenic | 50.0% | |
| TACCTGACAGTACCCAACAG+AGG | + | chr1_2:48489387-48489406 | None:intergenic | 50.0% | |
| GTTTGCAGTCAATAAGGGGG+AGG | + | chr1_2:48490656-48490675 | None:intergenic | 50.0% | |
| ! | AGATTACTTGGGAGTGCAGG+TGG | - | chr1_2:48491254-48491273 | Msa0074200:CDS | 50.0% |
| TGGCATGGATATCTGCACCA+TGG | - | chr1_2:48491274-48491293 | Msa0074200:CDS | 50.0% | |
| CAGTTCCTGCAATCTTGCCT+CGG | + | chr1_2:48491761-48491780 | None:intergenic | 50.0% | |
| AGGCAAGATTGCAGGAACTG+AGG | - | chr1_2:48491761-48491780 | Msa0074200:intron | 50.0% | |
| CCTGTTCATGGACATCTGGT+AGG | + | chr1_2:48492041-48492060 | None:intergenic | 50.0% | |
| CCTACCAGATGTCCATGAAC+AGG | - | chr1_2:48492038-48492057 | Msa0074200:intron | 50.0% | |
| GAAGCAAGGTGAAGTTGAGG+AGG | + | chr1_2:48492072-48492091 | None:intergenic | 50.0% | |
| GGAGAAGCAAGGTGAAGTTG+AGG | + | chr1_2:48492075-48492094 | None:intergenic | 50.0% | |
| !! | GCATAGTTGGTAGCGTAGGT+TGG | - | chr1_2:48492986-48493005 | Msa0074200:intron | 50.0% |
| GGTTGAGCTATGCAGATTGC+TGG | - | chr1_2:48493457-48493476 | Msa0074200:CDS | 50.0% | |
| TGAGCTATGCAGATTGCTGG+AGG | - | chr1_2:48493460-48493479 | Msa0074200:CDS | 50.0% | |
| GAGTAACAGGGCTAAGCATG+AGG | + | chr1_2:48493628-48493647 | None:intergenic | 50.0% | |
| GCAGCAGATAGGAGAGTAAC+AGG | + | chr1_2:48493641-48493660 | None:intergenic | 50.0% | |
| ACTCTCCTATCTGCTGCCAT+TGG | - | chr1_2:48493644-48493663 | Msa0074200:CDS | 50.0% | |
| CACCCCTTTGATACCCAAGA+TGG | - | chr1_2:48494313-48494332 | Msa0074200:intron | 50.0% | |
| AGAGAGTGGACAAATACGGC+TGG | - | chr1_2:48494410-48494429 | Msa0074200:intron | 50.0% | |
| AGACCCGTAAGGTTCAACGC+TGG | - | chr1_2:48488599-48488618 | Msa0074200:intron | 55.0% | |
| ACCTGTAGAAGGGGCTCCTA+AGG | - | chr1_2:48488750-48488769 | Msa0074200:intron | 55.0% | |
| TCCTTAGGAGCCCCTTCTAC+AGG | + | chr1_2:48488754-48488773 | None:intergenic | 55.0% | |
| TGTTCAGGGAGGAGTCCCAA+AGG | - | chr1_2:48488900-48488919 | Msa0074200:intron | 55.0% | |
| GTCATTAGCTGCATGCGCCT+TGG | - | chr1_2:48489178-48489197 | Msa0074200:intron | 55.0% | |
| GACATACCGCGAACTTTCCC+AGG | - | chr1_2:48489290-48489309 | Msa0074200:intron | 55.0% | |
| TTTCCCAGGTCACCCTGCTT+TGG | - | chr1_2:48489304-48489323 | Msa0074200:intron | 55.0% | |
| GCTCGACATAACCCCTCTGT+TGG | - | chr1_2:48489371-48489390 | Msa0074200:intron | 55.0% | |
| CCTGACAGTACCCAACAGAG+GGG | + | chr1_2:48489385-48489404 | None:intergenic | 55.0% | |
| !! | GGTGGACCAGCTCGTTTTTG+AGG | - | chr1_2:48491090-48491109 | Msa0074200:intron | 55.0% |
| !! | TCGAACAGCGCTGGCTCTAA+TGG | - | chr1_2:48491487-48491506 | Msa0074200:intron | 55.0% |
| ATCTTGCCTCGGTCACAGCT+AGG | + | chr1_2:48491750-48491769 | None:intergenic | 55.0% | |
| TGTGACCGAGGCAAGATTGC+AGG | - | chr1_2:48491753-48491772 | Msa0074200:intron | 55.0% | |
| ATCGTCTGCAGTTGAGCGCA+AGG | - | chr1_2:48494109-48494128 | Msa0074200:intron | 55.0% | |
| TCGTCTGCAGTTGAGCGCAA+GGG | - | chr1_2:48494110-48494129 | Msa0074200:intron | 55.0% | |
| ATCCTGGGAGGGCCAGTGAA+GGG | - | chr1_2:48488491-48488510 | Msa0074200:intron | 60.0% | |
| AGGTGTGAACACACGACGGG+TGG | - | chr1_2:48489048-48489067 | Msa0074200:intron | 60.0% | |
| GGGTGACCTGGGAAAGTTCG+CGG | + | chr1_2:48489299-48489318 | None:intergenic | 60.0% | |
| CGTCCAAAGCAGGGTGACCT+GGG | + | chr1_2:48489310-48489329 | None:intergenic | 60.0% | |
| TCGTCCAAAGCAGGGTGACC+TGG | + | chr1_2:48489311-48489330 | None:intergenic | 60.0% | |
| ! | CCCCTCTGTTGGGTACTGTC+AGG | - | chr1_2:48489382-48489401 | Msa0074200:intron | 60.0% |
| ! | ACTTGGGAGTGCAGGTGGCA+TGG | - | chr1_2:48491259-48491278 | Msa0074200:CDS | 60.0% |
| GGGTTACCTAGCTGTGACCG+AGG | - | chr1_2:48491741-48491760 | Msa0074200:intron | 60.0% | |
| CAAGCATGACCCAGGGTCAC+TGG | - | chr1_2:48491885-48491904 | Msa0074200:intron | 60.0% | |
| GATCCTGGGAGGGCCAGTGA+AGG | - | chr1_2:48488490-48488509 | Msa0074200:intron | 65.0% | |
| TCCTGGGAGGGCCAGTGAAG+GGG | - | chr1_2:48488492-48488511 | Msa0074200:intron | 65.0% | |
| TCCCCTTCACTGGCCCTCCC+AGG | + | chr1_2:48488496-48488515 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 48487185 | 48495002 | 48487185 | ID=Msa0074200;Name=Msa0074200 |
| chr1_2 | mRNA | 48487185 | 48495002 | 48487185 | ID=Msa0074200-mRNA-1;Parent=Msa0074200;Name=Msa0074200-mRNA-1;_AED=0.08;_eAED=0.10;_QI=0|0.42|0.33|0.86|1|1|15|0|740 |
| chr1_2 | exon | 48494956 | 48495002 | 48494956 | ID=Msa0074200-mRNA-1:exon:14793;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48494627 | 48494716 | 48494627 | ID=Msa0074200-mRNA-1:exon:14792;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48494318 | 48494387 | 48494318 | ID=Msa0074200-mRNA-1:exon:14791;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48493251 | 48494063 | 48493251 | ID=Msa0074200-mRNA-1:exon:14790;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48493010 | 48493156 | 48493010 | ID=Msa0074200-mRNA-1:exon:14789;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48492784 | 48492897 | 48492784 | ID=Msa0074200-mRNA-1:exon:14788;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48491941 | 48491999 | 48491941 | ID=Msa0074200-mRNA-1:exon:14787;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48491239 | 48491305 | 48491239 | ID=Msa0074200-mRNA-1:exon:14786;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48491045 | 48491096 | 48491045 | ID=Msa0074200-mRNA-1:exon:14785;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48490851 | 48490943 | 48490851 | ID=Msa0074200-mRNA-1:exon:14784;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48490669 | 48490752 | 48490669 | ID=Msa0074200-mRNA-1:exon:14783;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48490128 | 48490552 | 48490128 | ID=Msa0074200-mRNA-1:exon:14782;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48488683 | 48488744 | 48488683 | ID=Msa0074200-mRNA-1:exon:14781;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48488056 | 48488125 | 48488056 | ID=Msa0074200-mRNA-1:exon:14780;Parent=Msa0074200-mRNA-1 |
| chr1_2 | exon | 48487185 | 48487214 | 48487185 | ID=Msa0074200-mRNA-1:exon:14779;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48494956 | 48495002 | 48494956 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48494627 | 48494716 | 48494627 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48494318 | 48494387 | 48494318 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48493251 | 48494063 | 48493251 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48493010 | 48493156 | 48493010 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48492784 | 48492897 | 48492784 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48491941 | 48491999 | 48491941 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48491239 | 48491305 | 48491239 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48491045 | 48491096 | 48491045 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48490851 | 48490943 | 48490851 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48490669 | 48490752 | 48490669 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48490128 | 48490552 | 48490128 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48488683 | 48488744 | 48488683 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48488056 | 48488125 | 48488056 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| chr1_2 | CDS | 48487185 | 48487214 | 48487185 | ID=Msa0074200-mRNA-1:cds;Parent=Msa0074200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
