Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052030 | XP_003589133.1 | 97.717 | 438 | 10 | 0 | 1 | 438 | 6 | 443 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052030 | sp|P43297|RD21A_ARATH | 72.979 | 433 | 107 | 4 | 8 | 437 | 8 | 433 | 0.0 | 626 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052030 | Q2HTQ3 | 97.717 | 438 | 10 | 0 | 1 | 438 | 6 | 443 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa0052030 | -0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa0018070 | Msa0052030 | 0.820112 | 8.147694e-53 | -8.615850e-47 |
| Msa0018210 | Msa0052030 | 0.831135 | 1.982191e-55 | -8.615850e-47 |
| Msa0018940 | Msa0052030 | 0.803467 | 3.438427e-49 | -8.615850e-47 |
| Msa0026650 | Msa0052030 | 0.817549 | 3.113434e-52 | -8.615850e-47 |
| Msa0050200 | Msa0052030 | 0.810434 | 1.154891e-50 | -8.615850e-47 |
| Msa0051930 | Msa0052030 | 0.813458 | 2.533872e-51 | -8.615850e-47 |
| Msa0052030 | Msa0058270 | 0.814260 | 1.686415e-51 | -8.615850e-47 |
| Msa0052030 | Msa0061150 | 0.845360 | 4.262536e-59 | -8.615850e-47 |
| Msa0052030 | Msa0064300 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa0052030 | Msa0065950 | 0.838301 | 3.119662e-57 | -8.615850e-47 |
| Msa0052030 | Msa0085720 | 0.808718 | 2.699119e-50 | -8.615850e-47 |
| Msa0052030 | Msa0086890 | 0.819853 | 9.337551e-53 | -8.615850e-47 |
| Msa0052030 | Msa0097400 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0052030 | Msa0102120 | 0.821928 | 3.110790e-53 | -8.615850e-47 |
| Msa0052030 | Msa0105700 | 0.847530 | 1.090726e-59 | -8.615850e-47 |
| Msa0052030 | Msa0130520 | 0.833817 | 4.288224e-56 | -8.615850e-47 |
| Msa0052030 | Msa0142280 | 0.807696 | 4.454676e-50 | -8.615850e-47 |
| Msa0052030 | Msa0152170 | 0.847472 | 1.131651e-59 | -8.615850e-47 |
| Msa0052030 | Msa0153830 | 0.805190 | 1.504562e-49 | -8.615850e-47 |
| Msa0052030 | Msa0163780 | 0.807017 | 6.206345e-50 | -8.615850e-47 |
| Msa0052030 | Msa0169820 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
| Msa0052030 | Msa0183010 | -0.816040 | 6.787639e-52 | -8.615850e-47 |
| Msa0052030 | Msa0187220 | 0.810279 | 1.247316e-50 | -8.615850e-47 |
| Msa0052030 | Msa0199700 | 0.801154 | 1.029166e-48 | -8.615850e-47 |
| Msa0052030 | Msa0199800 | -0.809241 | 2.085123e-50 | -8.615850e-47 |
| Msa0052030 | Msa0230640 | -0.816505 | 5.343126e-52 | -8.615850e-47 |
| Msa0052030 | Msa0266210 | 0.802870 | 4.570145e-49 | -8.615850e-47 |
| Msa0052030 | Msa0271650 | 0.805679 | 1.187945e-49 | -8.615850e-47 |
| Msa0052030 | Msa0287670 | 0.803713 | 3.056891e-49 | -8.615850e-47 |
| Msa0052030 | Msa0307470 | 0.833530 | 5.058073e-56 | -8.615850e-47 |
| Msa0052030 | Msa0315290 | 0.811194 | 7.910577e-51 | -8.615850e-47 |
| Msa0052030 | Msa0340690 | 0.802061 | 6.708865e-49 | -8.615850e-47 |
| Msa0052030 | Msa0340710 | 0.807150 | 5.817089e-50 | -8.615850e-47 |
| Msa0052030 | Msa0347610 | 0.843785 | 1.132015e-58 | -8.615850e-47 |
| Msa0052030 | Msa0365490 | 0.804735 | 1.873242e-49 | -8.615850e-47 |
| Msa0052030 | Msa0388840 | 0.859116 | 5.166884e-63 | -8.615850e-47 |
| Msa0052030 | Msa0389810 | 0.869531 | 2.887228e-66 | -8.615850e-47 |
| Msa0052030 | Msa0394340 | 0.819983 | 8.718400e-53 | -8.615850e-47 |
| Msa0052030 | Msa0433530 | 0.855899 | 4.627195e-62 | -8.615850e-47 |
| Msa0052030 | Msa0442200 | 0.814649 | 1.383231e-51 | -8.615850e-47 |
| Msa0052030 | Msa0444090 | 0.805785 | 1.129050e-49 | -8.615850e-47 |
| Msa0052030 | Msa0468130 | 0.868291 | 7.281267e-66 | -8.615850e-47 |
| Msa0052030 | Msa0477260 | 0.831216 | 1.892473e-55 | -8.615850e-47 |
| Msa0052030 | Msa0489610 | 0.845859 | 3.122485e-59 | -8.615850e-47 |
| Msa0052030 | Msa0491520 | 0.802984 | 4.327826e-49 | -8.615850e-47 |
| Msa0052030 | Msa0500720 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
| Msa0052030 | Msa0530650 | 0.802151 | 6.426428e-49 | -8.615850e-47 |
| Msa0052030 | Msa0534410 | 0.807238 | 5.573627e-50 | -8.615850e-47 |
| Msa0052030 | Msa0545080 | 0.806853 | 6.721889e-50 | -8.615850e-47 |
| Msa0052030 | Msa0568240 | 0.812823 | 3.491919e-51 | -8.615850e-47 |
| Msa0052030 | Msa0570330 | 0.824664 | 7.141341e-54 | -8.615850e-47 |
| Msa0052030 | Msa0574850 | 0.812278 | 4.594840e-51 | -8.615850e-47 |
| Msa0052030 | Msa0587030 | 0.830558 | 2.745235e-55 | -8.615850e-47 |
| Msa0052030 | Msa0587190 | 0.811305 | 7.482098e-51 | -8.615850e-47 |
| Msa0052030 | Msa0615340 | 0.830210 | 3.338253e-55 | -8.615850e-47 |
| Msa0052030 | Msa0626850 | 0.825219 | 5.281878e-54 | -8.615850e-47 |
| Msa0052030 | Msa0627350 | 0.802242 | 6.156389e-49 | -8.615850e-47 |
| Msa0052030 | Msa0631990 | 0.811189 | 7.930503e-51 | -8.615850e-47 |
| Msa0052030 | Msa0647830 | 0.807577 | 4.721787e-50 | -8.615850e-47 |
| Msa0052030 | Msa0649130 | 0.820177 | 7.870375e-53 | -8.615850e-47 |
| Msa0052030 | Msa0658820 | 0.818268 | 2.141838e-52 | -8.615850e-47 |
| Msa0052030 | Msa0660300 | 0.832161 | 1.106976e-55 | -8.615850e-47 |
| Msa0052030 | Msa0664970 | 0.827253 | 1.732720e-54 | -8.615850e-47 |
| Msa0052030 | Msa0670660 | 0.821167 | 4.662137e-53 | -8.615850e-47 |
| Msa0052030 | Msa0679550 | 0.812086 | 5.059156e-51 | -8.615850e-47 |
| Msa0052030 | Msa0690440 | 0.800533 | 1.378268e-48 | -8.615850e-47 |
| Msa0052030 | Msa0704730 | 0.827248 | 1.737540e-54 | -8.615850e-47 |
| Msa0052030 | Msa0722910 | 0.804681 | 1.921837e-49 | -8.615850e-47 |
| Msa0052030 | Msa0722920 | 0.811099 | 8.292549e-51 | -8.615850e-47 |
| Msa0052030 | Msa0723110 | 0.827091 | 1.894164e-54 | -8.615850e-47 |
| Msa0052030 | Msa0724560 | 0.825883 | 3.677256e-54 | -8.615850e-47 |
| Msa0052030 | Msa0731180 | 0.834284 | 3.276709e-56 | -8.615850e-47 |
| Msa0052030 | Msa0756310 | 0.802154 | 6.417313e-49 | -8.615850e-47 |
| Msa0052030 | Msa0771580 | 0.807799 | 4.235851e-50 | -8.615850e-47 |
| Msa0052030 | Msa0794320 | 0.800332 | 1.514957e-48 | -8.615850e-47 |
| Msa0052030 | Msa0805920 | 0.809698 | 1.663699e-50 | -8.615850e-47 |
| Msa0052030 | Msa0827470 | 0.817633 | 2.979968e-52 | -8.615850e-47 |
| Msa0052030 | Msa0835730 | 0.814108 | 1.822271e-51 | -8.615850e-47 |
| Msa0052030 | Msa0843250 | 0.828566 | 8.374617e-55 | -8.615850e-47 |
| Msa0052030 | Msa0848900 | 0.816734 | 4.747108e-52 | -8.615850e-47 |
| Msa0052030 | Msa0869120 | 0.814372 | 1.593136e-51 | -8.615850e-47 |
| Msa0052030 | Msa0876360 | 0.828161 | 1.048629e-54 | -8.615850e-47 |
| Msa0052030 | Msa0878880 | 0.817470 | 3.243847e-52 | -8.615850e-47 |
| Msa0052030 | Msa0880110 | 0.816677 | 4.889183e-52 | -8.615850e-47 |
| Msa0052030 | Msa0944550 | 0.845048 | 5.178361e-59 | -8.615850e-47 |
| Msa0052030 | Msa0947760 | 0.808815 | 2.572360e-50 | -8.615850e-47 |
| Msa0052030 | Msa0974630 | 0.804864 | 1.760472e-49 | -8.615850e-47 |
| Msa0052030 | Msa0978700 | 0.825371 | 4.861946e-54 | -8.615850e-47 |
| Msa0052030 | Msa0982270 | 0.868377 | 6.832810e-66 | -8.615850e-47 |
| Msa0052030 | Msa0992490 | -0.810554 | 1.088179e-50 | -8.615850e-47 |
| Msa0052030 | Msa1018040 | 0.800843 | 1.191406e-48 | -8.615850e-47 |
| Msa0052030 | Msa1031810 | 0.803434 | 3.492850e-49 | -8.615850e-47 |
| Msa0052030 | Msa1070850 | 0.825939 | 3.566093e-54 | -8.615850e-47 |
| Msa0052030 | Msa1090260 | 0.800416 | 1.456156e-48 | -8.615850e-47 |
| Msa0052030 | Msa1092090 | 0.821173 | 4.648924e-53 | -8.615850e-47 |
| Msa0052030 | Msa1109820 | 0.818054 | 2.394654e-52 | -8.615850e-47 |
| Msa0052030 | Msa1118750 | 0.813090 | 3.051530e-51 | -8.615850e-47 |
| Msa0052030 | Msa1158670 | 0.828875 | 7.050860e-55 | -8.615850e-47 |
| Msa0052030 | Msa1163590 | -0.803624 | 3.189433e-49 | -8.615850e-47 |
| Msa0052030 | Msa1174310 | 0.851704 | 7.462130e-61 | -8.615850e-47 |
| Msa0052030 | Msa1212170 | 0.826214 | 3.067546e-54 | -8.615850e-47 |
| Msa0052030 | Msa1212250 | 0.813354 | 2.671359e-51 | -8.615850e-47 |
| Msa0052030 | Msa1222280 | 0.817548 | 3.115476e-52 | -8.615850e-47 |
| Msa0052030 | Msa1229610 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0052030 | Msa1230830 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0052030 | Msa1235400 | 0.863044 | 3.295937e-64 | -8.615850e-47 |
| Msa0052030 | Msa1263290 | -0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0052030 | Msa1272320 | 0.803097 | 4.102302e-49 | -8.615850e-47 |
| Msa0052030 | Msa1276510 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa0052030 | Msa1279210 | 0.804353 | 2.249614e-49 | -8.615850e-47 |
| Msa0052030 | Msa1306750 | 0.842711 | 2.187844e-58 | -8.615850e-47 |
| Msa0052030 | Msa1307740 | 0.879565 | 1.123323e-69 | -8.615850e-47 |
| Msa0052030 | Msa1314770 | 0.850714 | 1.420262e-60 | -8.615850e-47 |
| Msa0052030 | Msa1335230 | 0.812265 | 4.625060e-51 | -8.615850e-47 |
| Msa0052030 | Msa1344660 | 0.802520 | 5.396818e-49 | -8.615850e-47 |
| Msa0052030 | Msa1348600 | 0.849276 | 3.588239e-60 | -8.615850e-47 |
| Msa0052030 | Msa1350690 | 0.805148 | 1.535423e-49 | -8.615850e-47 |
| Msa0052030 | Msa1373350 | 0.826432 | 2.722137e-54 | -8.615850e-47 |
| Msa0052030 | Msa1376160 | -0.810838 | 9.443929e-51 | -8.615850e-47 |
| Msa0052030 | Msa1376930 | 0.810422 | 1.162144e-50 | -8.615850e-47 |
| Msa0052030 | Msa1378230 | 0.801039 | 1.086871e-48 | -8.615850e-47 |
| Msa0052030 | Msa1419000 | 0.824258 | 8.898251e-54 | -8.615850e-47 |
| Msa0052030 | Msa1444250 | -0.804738 | 1.870636e-49 | -8.615850e-47 |
| Msa0052030 | Msa1451620 | -0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0052030 | Msa1462060 | 0.803759 | 2.990115e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052030 | MtrunA17_Chr1g0153011 | 93.379 | 438 | 10 | 1 | 1 | 438 | 6 | 424 | 0.0 | 845 |
| Msa0052030 | MtrunA17_Chr3g0134231 | 72.811 | 434 | 115 | 2 | 7 | 438 | 11 | 443 | 0.0 | 646 |
| Msa0052030 | MtrunA17_Chr1g0208261 | 68.510 | 416 | 124 | 3 | 22 | 436 | 66 | 475 | 0.0 | 579 |
| Msa0052030 | MtrunA17_Chr4g0053311 | 64.543 | 361 | 114 | 1 | 3 | 363 | 2 | 348 | 8.02e-178 | 501 |
| Msa0052030 | MtrunA17_Chr3g0142071 | 51.020 | 392 | 181 | 6 | 49 | 438 | 49 | 431 | 2.56e-132 | 389 |
| Msa0052030 | MtrunA17_Chr3g0144281 | 52.632 | 342 | 150 | 4 | 16 | 357 | 19 | 348 | 6.60e-128 | 374 |
| Msa0052030 | MtrunA17_Chr3g0116551 | 51.397 | 358 | 162 | 8 | 11 | 365 | 6 | 354 | 1.15e-123 | 363 |
| Msa0052030 | MtrunA17_Chr4g0058081 | 49.862 | 363 | 172 | 7 | 13 | 373 | 6 | 360 | 7.04e-119 | 351 |
| Msa0052030 | MtrunA17_Chr2g0283901 | 45.388 | 412 | 200 | 8 | 42 | 438 | 43 | 444 | 2.91e-116 | 349 |
| Msa0052030 | MtrunA17_Chr4g0040881 | 51.368 | 329 | 137 | 7 | 37 | 355 | 28 | 343 | 5.12e-113 | 335 |
| Msa0052030 | MtrunA17_Chr4g0041061 | 53.165 | 316 | 125 | 7 | 50 | 355 | 41 | 343 | 5.77e-113 | 335 |
| Msa0052030 | MtrunA17_Chr5g0405751 | 48.864 | 352 | 151 | 8 | 16 | 355 | 8 | 342 | 1.53e-111 | 332 |
| Msa0052030 | MtrunA17_Chr4g0041081 | 52.532 | 316 | 127 | 7 | 50 | 355 | 41 | 343 | 1.95e-111 | 331 |
| Msa0052030 | MtrunA17_Chr4g0024411 | 50.462 | 325 | 145 | 6 | 38 | 355 | 26 | 341 | 2.94e-111 | 331 |
| Msa0052030 | MtrunA17_Chr2g0315491 | 49.271 | 343 | 152 | 7 | 19 | 355 | 13 | 339 | 3.89e-111 | 330 |
| Msa0052030 | MtrunA17_Chr4g0041521 | 52.597 | 308 | 135 | 6 | 50 | 355 | 40 | 338 | 8.21e-109 | 324 |
| Msa0052030 | MtrunA17_Chr4g0040851 | 45.352 | 355 | 183 | 6 | 4 | 356 | 14 | 359 | 1.24e-107 | 322 |
| Msa0052030 | MtrunA17_Chr4g0041481 | 51.948 | 308 | 137 | 6 | 50 | 355 | 40 | 338 | 1.91e-107 | 321 |
| Msa0052030 | MtrunA17_Chr4g0060251 | 50.467 | 321 | 140 | 8 | 45 | 355 | 32 | 343 | 7.51e-107 | 320 |
| Msa0052030 | MtrunA17_Chr2g0325121 | 46.307 | 352 | 166 | 7 | 14 | 358 | 3 | 338 | 1.06e-106 | 319 |
| Msa0052030 | MtrunA17_Chr4g0041471 | 47.664 | 321 | 161 | 6 | 39 | 356 | 25 | 341 | 6.80e-101 | 304 |
| Msa0052030 | MtrunA17_Chr2g0319991 | 45.342 | 322 | 172 | 4 | 38 | 356 | 23 | 343 | 7.16e-99 | 299 |
| Msa0052030 | MtrunA17_Chr7g0248391 | 46.326 | 313 | 149 | 10 | 50 | 358 | 42 | 339 | 1.17e-86 | 268 |
| Msa0052030 | MtrunA17_Chr7g0248811 | 43.077 | 325 | 166 | 8 | 37 | 355 | 23 | 334 | 7.90e-86 | 266 |
| Msa0052030 | MtrunA17_Chr8g0379151 | 40.599 | 367 | 184 | 14 | 5 | 357 | 27 | 373 | 1.73e-75 | 240 |
| Msa0052030 | MtrunA17_Chr2g0283741 | 37.057 | 367 | 209 | 12 | 9 | 362 | 8 | 365 | 8.04e-71 | 228 |
| Msa0052030 | MtrunA17_Chr0c27g0493921 | 38.227 | 361 | 190 | 12 | 11 | 356 | 6 | 348 | 2.74e-67 | 218 |
| Msa0052030 | MtrunA17_Chr2g0283671 | 51.739 | 230 | 106 | 5 | 128 | 356 | 2 | 227 | 6.15e-67 | 213 |
| Msa0052030 | MtrunA17_Chr2g0311471 | 40.884 | 362 | 183 | 15 | 7 | 356 | 4 | 346 | 7.00e-67 | 217 |
| Msa0052030 | MtrunA17_Chr4g0070441 | 38.710 | 341 | 181 | 11 | 10 | 335 | 5 | 332 | 1.69e-64 | 211 |
| Msa0052030 | MtrunA17_Chr1g0155781 | 41.946 | 298 | 147 | 8 | 56 | 336 | 57 | 345 | 4.06e-64 | 210 |
| Msa0052030 | MtrunA17_Chr4g0035551 | 38.983 | 354 | 168 | 12 | 13 | 336 | 6 | 341 | 8.26e-64 | 209 |
| Msa0052030 | MtrunA17_Chr2g0311381 | 41.231 | 325 | 165 | 15 | 48 | 355 | 34 | 349 | 1.27e-60 | 201 |
| Msa0052030 | MtrunA17_Chr2g0311391 | 35.492 | 386 | 190 | 16 | 7 | 354 | 4 | 368 | 4.08e-55 | 187 |
| Msa0052030 | MtrunA17_Chr1g0199131 | 33.962 | 371 | 201 | 10 | 4 | 348 | 6 | 358 | 8.98e-55 | 186 |
| Msa0052030 | MtrunA17_Chr1g0156161 | 45.249 | 221 | 111 | 7 | 138 | 354 | 47 | 261 | 1.06e-52 | 177 |
| Msa0052030 | MtrunA17_Chr2g0283751 | 38.889 | 288 | 155 | 10 | 11 | 287 | 10 | 287 | 1.23e-50 | 173 |
| Msa0052030 | MtrunA17_Chr4g0036731 | 35.714 | 294 | 146 | 8 | 50 | 336 | 48 | 305 | 1.84e-46 | 163 |
| Msa0052030 | MtrunA17_Chr4g0036281 | 32.551 | 341 | 179 | 10 | 7 | 336 | 9 | 309 | 1.67e-44 | 158 |
| Msa0052030 | MtrunA17_Chr4g0037291 | 34.459 | 296 | 151 | 7 | 50 | 336 | 89 | 350 | 4.72e-44 | 157 |
| Msa0052030 | MtrunA17_Chr7g0248421 | 48.993 | 149 | 71 | 3 | 164 | 311 | 57 | 201 | 9.38e-40 | 141 |
| Msa0052030 | MtrunA17_Chr7g0248371 | 50.476 | 105 | 49 | 3 | 258 | 361 | 34 | 136 | 4.18e-29 | 111 |
| Msa0052030 | MtrunA17_Chr2g0311091 | 35.714 | 182 | 107 | 3 | 19 | 190 | 3 | 184 | 5.42e-29 | 112 |
| Msa0052030 | MtrunA17_Chr1g0156771 | 51.429 | 105 | 47 | 3 | 138 | 239 | 53 | 156 | 8.89e-28 | 108 |
| Msa0052030 | MtrunA17_Chr2g0283661 | 39.259 | 135 | 78 | 2 | 42 | 175 | 25 | 156 | 9.26e-28 | 111 |
| Msa0052030 | MtrunA17_Chr2g0283661 | 44.954 | 109 | 57 | 3 | 248 | 355 | 164 | 270 | 6.61e-25 | 103 |
| Msa0052030 | MtrunA17_Chr7g0248661 | 53.947 | 76 | 33 | 2 | 282 | 356 | 2 | 76 | 2.51e-21 | 87.4 |
| Msa0052030 | MtrunA17_Chr7g0271041 | 28.114 | 281 | 157 | 13 | 97 | 348 | 66 | 330 | 1.06e-19 | 90.1 |
| Msa0052030 | MtrunA17_Chr7g0271031 | 27.046 | 281 | 160 | 12 | 97 | 348 | 110 | 374 | 6.31e-17 | 82.4 |
| Msa0052030 | MtrunA17_Chr1g0147901 | 27.451 | 102 | 66 | 1 | 5 | 106 | 1 | 94 | 5.50e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052030 | AT1G47128.1 | 72.979 | 433 | 107 | 4 | 8 | 437 | 8 | 433 | 0.0 | 626 |
| Msa0052030 | AT5G43060.1 | 72.055 | 433 | 110 | 5 | 9 | 437 | 9 | 434 | 0.0 | 610 |
| Msa0052030 | AT3G19390.1 | 60.325 | 431 | 150 | 8 | 9 | 436 | 8 | 420 | 0.0 | 514 |
| Msa0052030 | AT4G36880.1 | 61.890 | 328 | 119 | 2 | 41 | 362 | 40 | 367 | 1.70e-150 | 432 |
| Msa0052030 | AT1G09850.1 | 52.897 | 397 | 172 | 5 | 44 | 438 | 26 | 409 | 4.51e-144 | 418 |
| Msa0052030 | AT4G23520.1 | 55.307 | 358 | 141 | 9 | 5 | 358 | 9 | 351 | 3.00e-136 | 395 |
| Msa0052030 | AT3G19400.1 | 59.133 | 323 | 122 | 6 | 40 | 358 | 34 | 350 | 4.20e-136 | 395 |
| Msa0052030 | AT4G11310.1 | 51.524 | 361 | 165 | 6 | 1 | 358 | 1 | 354 | 1.86e-127 | 373 |
| Msa0052030 | AT4G11320.2 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 3.35e-126 | 370 |
| Msa0052030 | AT4G11320.1 | 51.801 | 361 | 164 | 6 | 3 | 358 | 6 | 361 | 3.35e-126 | 370 |
| Msa0052030 | AT3G48340.1 | 52.113 | 355 | 163 | 5 | 12 | 365 | 4 | 352 | 9.95e-126 | 369 |
| Msa0052030 | AT1G20850.1 | 53.731 | 335 | 145 | 4 | 23 | 357 | 30 | 354 | 8.69e-123 | 361 |
| Msa0052030 | AT4G35350.1 | 50.712 | 351 | 162 | 4 | 7 | 357 | 14 | 353 | 1.32e-121 | 358 |
| Msa0052030 | AT5G50260.1 | 55.521 | 317 | 135 | 5 | 49 | 363 | 37 | 349 | 3.11e-119 | 352 |
| Msa0052030 | AT1G06260.1 | 47.714 | 350 | 164 | 6 | 11 | 357 | 10 | 343 | 1.70e-109 | 327 |
| Msa0052030 | AT3G48350.1 | 47.922 | 361 | 173 | 7 | 5 | 362 | 1 | 349 | 5.88e-109 | 326 |
| Msa0052030 | AT5G45890.1 | 45.042 | 353 | 173 | 6 | 7 | 355 | 9 | 344 | 3.60e-105 | 316 |
| Msa0052030 | AT3G43960.1 | 51.032 | 339 | 151 | 10 | 37 | 368 | 28 | 358 | 3.73e-103 | 311 |
| Msa0052030 | AT3G19400.2 | 58.566 | 251 | 95 | 5 | 40 | 286 | 34 | 279 | 1.88e-100 | 301 |
| Msa0052030 | AT2G34080.1 | 42.033 | 364 | 183 | 8 | 1 | 356 | 1 | 344 | 1.13e-91 | 281 |
| Msa0052030 | AT2G27420.1 | 42.936 | 361 | 183 | 10 | 5 | 356 | 1 | 347 | 2.75e-91 | 280 |
| Msa0052030 | AT3G49340.1 | 46.815 | 314 | 152 | 9 | 50 | 356 | 35 | 340 | 1.33e-90 | 278 |
| Msa0052030 | AT4G35350.2 | 48.239 | 284 | 136 | 4 | 7 | 290 | 14 | 286 | 3.02e-89 | 273 |
| Msa0052030 | AT1G29080.1 | 41.905 | 315 | 175 | 7 | 46 | 356 | 35 | 345 | 3.24e-82 | 257 |
| Msa0052030 | AT1G29090.1 | 40.000 | 365 | 179 | 11 | 9 | 356 | 13 | 354 | 6.02e-81 | 254 |
| Msa0052030 | AT3G48350.2 | 44.097 | 288 | 148 | 5 | 5 | 290 | 1 | 277 | 2.94e-74 | 234 |
| Msa0052030 | AT1G29110.1 | 35.673 | 342 | 202 | 6 | 19 | 356 | 6 | 333 | 4.11e-70 | 225 |
| Msa0052030 | AT5G60360.1 | 38.286 | 350 | 179 | 12 | 27 | 356 | 24 | 356 | 3.27e-66 | 216 |
| Msa0052030 | AT3G45310.1 | 36.533 | 375 | 200 | 12 | 1 | 356 | 1 | 356 | 2.51e-65 | 214 |
| Msa0052030 | AT4G39090.1 | 39.806 | 309 | 159 | 7 | 42 | 334 | 46 | 343 | 2.55e-64 | 211 |
| Msa0052030 | AT5G60360.2 | 37.714 | 350 | 180 | 12 | 27 | 356 | 24 | 355 | 8.04e-64 | 209 |
| Msa0052030 | AT5G60360.3 | 38.532 | 327 | 173 | 10 | 27 | 335 | 24 | 340 | 2.34e-63 | 209 |
| Msa0052030 | AT2G21430.1 | 36.212 | 359 | 185 | 10 | 1 | 334 | 1 | 340 | 6.42e-63 | 207 |
| Msa0052030 | AT3G45310.2 | 36.074 | 377 | 198 | 13 | 1 | 356 | 1 | 355 | 7.75e-63 | 207 |
| Msa0052030 | AT4G16190.1 | 35.574 | 357 | 195 | 11 | 6 | 336 | 3 | 350 | 1.37e-57 | 194 |
| Msa0052030 | AT3G54940.2 | 33.333 | 357 | 195 | 10 | 6 | 336 | 8 | 347 | 1.88e-52 | 180 |
| Msa0052030 | AT3G54940.3 | 32.394 | 284 | 160 | 7 | 6 | 272 | 8 | 276 | 6.50e-40 | 144 |
| Msa0052030 | AT4G01610.1 | 27.148 | 291 | 173 | 12 | 97 | 361 | 66 | 343 | 9.33e-20 | 90.9 |
| Msa0052030 | AT1G02305.1 | 28.058 | 278 | 161 | 12 | 97 | 348 | 69 | 333 | 1.51e-19 | 90.1 |
| Msa0052030 | AT4G01610.2 | 26.460 | 291 | 175 | 12 | 97 | 361 | 66 | 343 | 6.25e-18 | 85.5 |
| Msa0052030 | AT1G02300.1 | 28.095 | 210 | 122 | 8 | 161 | 348 | 148 | 350 | 3.78e-13 | 71.2 |
Find 116 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCGTAGGATGAAGAAAT+TGG | 0.244550 | 1_2:-6216046 | Msa0052030:CDS |
| TATGTTCATCAATGAATTTA+AGG | 0.255434 | 1_2:+6216166 | None:intergenic |
| GGTGGTGATGGTCCAGGGTT+AGG | 0.264790 | 1_2:+6213011 | None:intergenic |
| CAGAAAACGGGAAAGATTAT+TGG | 0.266107 | 1_2:-6213172 | Msa0052030:CDS |
| GGGTTCTGTCCATTCTTAAT+TGG | 0.270191 | 1_2:+6213035 | None:intergenic |
| TTCCTCCAATCAACAGATTC+AGG | 0.289567 | 1_2:+6215976 | None:intergenic |
| TGTTGCTGTATTTACGAGTA+TGG | 0.314590 | 1_2:-6212927 | Msa0052030:CDS |
| TTTCTCACCTAAACCGTTGT+AGG | 0.323971 | 1_2:+6216218 | None:intergenic |
| AACTTACATATTCATATAAC+TGG | 0.326706 | 1_2:+6213874 | None:intergenic |
| AGGATGCAATGGTGGACTTA+TGG | 0.331252 | 1_2:-6214253 | Msa0052030:CDS |
| TGAATTCGACATATAGATTA+GGG | 0.336748 | 1_2:-6216137 | Msa0052030:CDS |
| GTGGTGATGGTCCAGGGTTA+GGG | 0.341154 | 1_2:+6213012 | None:intergenic |
| GGAAAATCCTACAACGGTTT+AGG | 0.345309 | 1_2:-6216225 | Msa0052030:CDS |
| ATGGTAGATGTGACCAGAAC+AGG | 0.354867 | 1_2:-6214158 | Msa0052030:CDS |
| GAAATTCATGGGGTGGTAGC+TGG | 0.356281 | 1_2:-6213142 | Msa0052030:CDS |
| TTGAATTCGACATATAGATT+AGG | 0.369544 | 1_2:-6216138 | Msa0052030:CDS |
| CAGACAGATGGTGGCTTGAT+AGG | 0.385214 | 1_2:+6212984 | None:intergenic |
| TGTTCCTGCTTATGATGAAT+TGG | 0.389594 | 1_2:-6213961 | Msa0052030:CDS |
| TCTTGTCAGGGTGTATTTAC+CGG | 0.390275 | 1_2:-6213245 | Msa0052030:intron |
| TGAAGAAATTGGGTGGTTCT+AGG | 0.394114 | 1_2:-6216035 | Msa0052030:CDS |
| CCAATTAACTAACCCTGTTC+TGG | 0.398872 | 1_2:+6214145 | None:intergenic |
| CCTATCGCCGTTGCTGTTGA+AGG | 0.401421 | 1_2:-6213912 | Msa0052030:CDS |
| CGTTGGTTAGATCCGCGAAC+CGG | 0.404470 | 1_2:+6216109 | None:intergenic |
| ATTGGATTGTGAGAAATTCA+TGG | 0.410060 | 1_2:-6213154 | Msa0052030:CDS |
| GGAGATGATCGACATGTCTA+AGG | 0.412540 | 1_2:+6216335 | None:intergenic |
| TACCCTTACAAGGCTATTGA+TGG | 0.421160 | 1_2:-6214177 | Msa0052030:CDS |
| CTACCATCAATAGCCTTGTA+AGG | 0.422671 | 1_2:+6214174 | None:intergenic |
| AATTGCCTGAATCTGTTGAT+TGG | 0.426885 | 1_2:-6215981 | Msa0052030:CDS |
| CCATTCTTAATTGGATAAGA+TGG | 0.437304 | 1_2:+6213044 | None:intergenic |
| AAATTCATGGGGTGGTAGCT+GGG | 0.440858 | 1_2:-6213141 | Msa0052030:CDS |
| TCAGCAATCGCAGCTGTTGA+AGG | 0.443055 | 1_2:-6214354 | Msa0052030:CDS |
| TTTCAATGAAGGGAGTTGTT+GGG | 0.446061 | 1_2:-6214382 | Msa0052030:intron |
| GGTGATGGTCCAGGGTTAGG+GGG | 0.448618 | 1_2:+6213014 | None:intergenic |
| TGGTGATGGTCCAGGGTTAG+GGG | 0.449337 | 1_2:+6213013 | None:intergenic |
| GTGATGGTCCAGGGTTAGGG+GGG | 0.453507 | 1_2:+6213015 | None:intergenic |
| CATAGTCAACACTTCTTCGT+TGG | 0.459007 | 1_2:+6216272 | None:intergenic |
| AGGAAGGAAGGTGCTGTTGT+TGG | 0.459612 | 1_2:-6215958 | Msa0052030:CDS |
| TCGTGCTGGACTTTGTCTTA+AGG | 0.462543 | 1_2:-6212805 | None:intergenic |
| GTTGGATACGGTACAGAAAA+CGG | 0.466958 | 1_2:-6213185 | Msa0052030:CDS |
| TTCACTATCAGAACAAGAAC+TGG | 0.467996 | 1_2:-6214301 | Msa0052030:CDS |
| AATTTCTTCATCCTACGGTT+CGG | 0.472057 | 1_2:+6216048 | None:intergenic |
| GGTGAAGGTGGTGATGGTCC+AGG | 0.475487 | 1_2:+6213005 | None:intergenic |
| TGATGAATTGGCCTTGCAAA+AGG | 0.476220 | 1_2:-6213949 | Msa0052030:CDS |
| CTTGCTTCTATACTCTTCGT+TGG | 0.478320 | 1_2:+6216092 | None:intergenic |
| GGAATAAATAAGATTGTGAC+AGG | 0.481755 | 1_2:-6214333 | Msa0052030:CDS |
| CACCCAATTTCTTCATCCTA+CGG | 0.483167 | 1_2:+6216043 | None:intergenic |
| AGTGCTTACCACAACTTGCT+TGG | 0.487527 | 1_2:+6215926 | None:intergenic |
| GCTTGTTGATTTGTCTGGGT+GGG | 0.490913 | 1_2:+6216302 | None:intergenic |
| CAACAGCAACGGCGATAGGC+TGG | 0.494154 | 1_2:+6213916 | None:intergenic |
| ATTAGGGTTGACCCGGTTCG+CGG | 0.494343 | 1_2:-6216121 | Msa0052030:CDS |
| CCTTCAACAGCAACGGCGAT+AGG | 0.495351 | 1_2:+6213912 | None:intergenic |
| AACCGTAGGATGAAGAAATT+GGG | 0.496972 | 1_2:-6216045 | Msa0052030:CDS |
| TTGGATACGGTACAGAAAAC+GGG | 0.498134 | 1_2:-6213184 | Msa0052030:CDS |
| GGCTAGTGAAACTGTGAAAG+TGG | 0.504168 | 1_2:+6216356 | None:intergenic |
| CCTGTCTGTGACACTCGTGC+TGG | 0.506173 | 1_2:-6212819 | Msa0052030:CDS |
| TGGAAGATCTTGCTTTGAGT+GGG | 0.510888 | 1_2:-6212907 | Msa0052030:CDS |
| CCATCTTATCCAATTAAGAA+TGG | 0.514473 | 1_2:-6213044 | Msa0052030:CDS |
| TGCTTGTTGATTTGTCTGGG+TGG | 0.529438 | 1_2:+6216301 | None:intergenic |
| AAATTCATTGATGAACATAA+CGG | 0.530458 | 1_2:-6216162 | Msa0052030:CDS |
| TCAAGCAGAGCAGGAAAGTG+TGG | 0.532736 | 1_2:-6213080 | Msa0052030:CDS |
| AGCTACTACAGCTGTGCTGA+AGG | 0.535391 | 1_2:-6212957 | Msa0052030:CDS |
| TTTGAGTTCATCATCAGTAA+TGG | 0.537702 | 1_2:-6214222 | Msa0052030:CDS |
| AATCTAGCTTCAAGCAGAGC+AGG | 0.546872 | 1_2:-6213089 | Msa0052030:CDS |
| TTGGATTGTGAGAAATTCAT+GGG | 0.548066 | 1_2:-6213153 | Msa0052030:CDS |
| GACCATGGTGTTGCAGCTGT+TGG | 0.548818 | 1_2:-6213203 | Msa0052030:CDS |
| TGCCTGAATCTGTTGATTGG+AGG | 0.549740 | 1_2:-6215978 | Msa0052030:CDS |
| TGCTGTTGAAGGAGGCGGTA+GGG | 0.550318 | 1_2:-6213901 | Msa0052030:CDS |
| GGTGGTAGCTGGGGTGAACA+AGG | 0.554597 | 1_2:-6213131 | Msa0052030:CDS |
| TTGATAGGTGAAGGTGGTGA+TGG | 0.555756 | 1_2:+6212999 | None:intergenic |
| GCCGTTGCTGTTGAAGGAGG+CGG | 0.557434 | 1_2:-6213906 | Msa0052030:CDS |
| GGTGTTGCAGCTGTTGGATA+CGG | 0.561703 | 1_2:-6213197 | Msa0052030:CDS |
| CATATAGATTAGGGTTGACC+CGG | 0.561757 | 1_2:-6216128 | Msa0052030:CDS |
| ATGGAAGATCTTGCTTTGAG+TGG | 0.563923 | 1_2:-6212908 | Msa0052030:CDS |
| TAGTGCTGTTCCACATCTAC+CGG | 0.566895 | 1_2:+6213226 | None:intergenic |
| CCAGCACGAGTGTCACAGAC+AGG | 0.571924 | 1_2:+6212819 | None:intergenic |
| TGAAGAGGATTACCCTTACA+AGG | 0.572769 | 1_2:-6214187 | Msa0052030:CDS |
| AATTCATGGGGTGGTAGCTG+GGG | 0.574383 | 1_2:-6213140 | Msa0052030:CDS |
| AATCGTTATGCGCCACGTGT+CGG | 0.576425 | 1_2:-6216009 | Msa0052030:CDS |
| GTTTAGGTGAGAAAGACAAA+AGG | 0.579754 | 1_2:-6216209 | Msa0052030:CDS |
| GTCAAAGACCAAGCAAGTTG+TGG | 0.584862 | 1_2:-6215934 | Msa0052030:intron |
| AAGGCCAATTCATCATAAGC+AGG | 0.585009 | 1_2:+6213957 | None:intergenic |
| GGTGTATTTACCGGTAGATG+TGG | 0.590389 | 1_2:-6213236 | Msa0052030:CDS |
| GTTGGTTAGATCCGCGAACC+GGG | 0.598424 | 1_2:+6216110 | None:intergenic |
| TACCATCAATAGCCTTGTAA+GGG | 0.599159 | 1_2:+6214175 | None:intergenic |
| GAGTTCATCATCAGTAATGG+TGG | 0.599792 | 1_2:-6214219 | Msa0052030:CDS |
| ACTATCAGAACAAGAACTGG+TGG | 0.602270 | 1_2:-6214298 | Msa0052030:CDS |
| GTGAAGGTGGTGATGGTCCA+GGG | 0.603987 | 1_2:+6213006 | None:intergenic |
| ATCGCCGTTGCTGTTGAAGG+AGG | 0.609464 | 1_2:-6213909 | Msa0052030:CDS |
| TTGCTGTTGAAGGAGGCGGT+AGG | 0.609931 | 1_2:-6213902 | Msa0052030:CDS |
| GAAGAGTGGTTAGTGAAACA+TGG | 0.615801 | 1_2:-6216246 | Msa0052030:CDS |
| CAAAGATCGATCCGAACCGT+AGG | 0.618623 | 1_2:-6216059 | Msa0052030:CDS |
| CAGCAAGTAGCAGACTCAAG+AGG | 0.620435 | 1_2:+6212876 | None:intergenic |
| TAGTAGCTGTCACAGACAGA+TGG | 0.620790 | 1_2:+6212972 | None:intergenic |
| TGGTAGATGTGACCAGAACA+GGG | 0.623188 | 1_2:-6214157 | Msa0052030:intron |
| TGGTGGCATTGACTCTGAAG+AGG | 0.626193 | 1_2:-6214202 | Msa0052030:CDS |
| TCATACAACGAAGGATGCAA+TGG | 0.627683 | 1_2:-6214264 | Msa0052030:CDS |
| TACAACGAAGGATGCAATGG+TGG | 0.630463 | 1_2:-6214261 | Msa0052030:CDS |
| GGCAATTTATCACCGACACG+TGG | 0.638153 | 1_2:+6215997 | None:intergenic |
| TGTTGACTATGTACGAAGAG+TGG | 0.640568 | 1_2:-6216260 | Msa0052030:CDS |
| TAGCTGTCACAGACAGATGG+TGG | 0.645708 | 1_2:+6212975 | None:intergenic |
| ATTACTGATGATGAACTCAA+AGG | 0.646757 | 1_2:+6214224 | None:intergenic |
| GGTGGCTTGATAGGTGAAGG+TGG | 0.647988 | 1_2:+6212993 | None:intergenic |
| ACCGCCTCCTTCAACAGCAA+CGG | 0.651172 | 1_2:+6213905 | None:intergenic |
| TCTGTTGATTGGAGGAAGGA+AGG | 0.651628 | 1_2:-6215970 | Msa0052030:CDS |
| TGAATCTGTTGATTGGAGGA+AGG | 0.656666 | 1_2:-6215974 | Msa0052030:CDS |
| CACAGACAGGATACTCATGA+GGG | 0.662230 | 1_2:+6212832 | None:intergenic |
| TCACAGACAGGATACTCATG+AGG | 0.662392 | 1_2:+6212831 | None:intergenic |
| ATCCAACAGCTGCAACACCA+TGG | 0.676166 | 1_2:+6213201 | None:intergenic |
| CGTAGGATGAAGAAATTGGG+TGG | 0.680087 | 1_2:-6216042 | Msa0052030:CDS |
| GATGGTGGCTTGATAGGTGA+AGG | 0.689206 | 1_2:+6212990 | None:intergenic |
| GGAAGATCTTGCTTTGAGTG+GGG | 0.689687 | 1_2:-6212906 | Msa0052030:CDS |
| AAACATGGAAAATCCTACAA+CGG | 0.700433 | 1_2:-6216231 | Msa0052030:CDS |
| ATTGTGAGAAATTCATGGGG+TGG | 0.703535 | 1_2:-6213149 | Msa0052030:CDS |
| TGTGATACATCATACAACGA+AGG | 0.706999 | 1_2:-6214273 | Msa0052030:CDS |
| TGTGGAACAGCACTAGACCA+TGG | 0.711951 | 1_2:-6213218 | Msa0052030:CDS |
| TGGATTGTGAGAAATTCATG+GGG | 0.737069 | 1_2:-6213152 | Msa0052030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAAATTTTAATTCATAAA+AGG | - | chr1_2:6213861-6213880 | Msa0052030:intron | 10.0% |
| !!! | CAAAATTTTAATTCATAAAA+GGG | - | chr1_2:6213862-6213881 | Msa0052030:intron | 10.0% |
| !! | TCAAAAAAAAAAAAATTAAC+AGG | + | chr1_2:6215867-6215886 | None:intergenic | 10.0% |
| !! | AAAAGAAAAAGAAAAAAGAA+AGG | + | chr1_2:6213338-6213357 | None:intergenic | 15.0% |
| !!! | TTAGATTTTTCTTATTTTCT+TGG | - | chr1_2:6213671-6213690 | Msa0052030:intron | 15.0% |
| !! | TTAAACTAAAAACAATTCTT+TGG | - | chr1_2:6214127-6214146 | Msa0052030:intron | 15.0% |
| !!! | TTTTTTTTTGTAGTCATATA+AGG | - | chr1_2:6214179-6214198 | Msa0052030:CDS | 15.0% |
| !!! | AACAAAAAAGCATTATATTA+TGG | + | chr1_2:6214616-6214635 | None:intergenic | 15.0% |
| !!! | ATAATATTAGCAATTTTTTG+TGG | + | chr1_2:6214792-6214811 | None:intergenic | 15.0% |
| !! | TATGTTCATCAATGAATTTA+AGG | + | chr1_2:6213039-6213058 | None:intergenic | 20.0% |
| !! | AAATTCATTGATGAACATAA+CGG | - | chr1_2:6213040-6213059 | Msa0052030:CDS | 20.0% |
| !!! | ATTTTCTTGGATATGTTATT+AGG | - | chr1_2:6213684-6213703 | Msa0052030:intron | 20.0% |
| !! | TACAATACACCAAAAAATTA+TGG | + | chr1_2:6213941-6213960 | None:intergenic | 20.0% |
| !!! | ATGATTTAAAATTTTGTCAC+CGG | + | chr1_2:6214006-6214025 | None:intergenic | 20.0% |
| !! | GACTACAAAAAAAAAGAAAA+AGG | + | chr1_2:6214174-6214193 | None:intergenic | 20.0% |
| !!! | TATATTTCGTATGACTTTTA+AGG | + | chr1_2:6214388-6214407 | None:intergenic | 20.0% |
| !!! | TATCTTCTTTTTTTCAATGA+AGG | - | chr1_2:6214809-6214828 | Msa0052030:intron | 20.0% |
| !!! | ATCTTCTTTTTTTCAATGAA+GGG | - | chr1_2:6214810-6214829 | Msa0052030:intron | 20.0% |
| !! | AACTTACATATTCATATAAC+TGG | + | chr1_2:6215331-6215350 | None:intergenic | 20.0% |
| !! | ATTAATTCTACTATGAAACT+AGG | - | chr1_2:6215356-6215375 | Msa0052030:intron | 20.0% |
| !! | ATGTATTGTTAGATACAATA+TGG | + | chr1_2:6215689-6215708 | None:intergenic | 20.0% |
| !! | TATTGTATCTAACAATACAT+TGG | - | chr1_2:6215689-6215708 | Msa0052030:intron | 20.0% |
| !! | TATAAATTGTTTAGAAGAGA+AGG | + | chr1_2:6215726-6215745 | None:intergenic | 20.0% |
| ! | TTGAATTCGACATATAGATT+AGG | - | chr1_2:6213064-6213083 | Msa0052030:CDS | 25.0% |
| ! | TGAATTCGACATATAGATTA+GGG | - | chr1_2:6213065-6213084 | Msa0052030:CDS | 25.0% |
| ! | TAATGATGTACTTTAATCTG+TGG | - | chr1_2:6213591-6213610 | Msa0052030:intron | 25.0% |
| !!! | TGATTTAAAATTTTGTCACC+GGG | + | chr1_2:6214005-6214024 | None:intergenic | 25.0% |
| !!! | ATTTTAATGATCTGAGAGTT+AGG | + | chr1_2:6214052-6214071 | None:intergenic | 25.0% |
| ! | TTGCATTTGTTTGTTCAATA+TGG | - | chr1_2:6214288-6214307 | Msa0052030:CDS | 25.0% |
| ! | TGCATTTGTTTGTTCAATAT+GGG | - | chr1_2:6214289-6214308 | Msa0052030:CDS | 25.0% |
| !! | TTTAAGGTAGACATGATTAA+AGG | + | chr1_2:6214372-6214391 | None:intergenic | 25.0% |
| ! | TTGATATATTGAGTACTCTT+GGG | + | chr1_2:6214563-6214582 | None:intergenic | 25.0% |
| ! | ATTGATATATTGAGTACTCT+TGG | + | chr1_2:6214564-6214583 | None:intergenic | 25.0% |
| ! | GTACTCAATATATCAATCAT+TGG | - | chr1_2:6214567-6214586 | Msa0052030:intron | 25.0% |
| ! | CAATCATTGGTGTAATAATA+TGG | - | chr1_2:6214580-6214599 | Msa0052030:intron | 25.0% |
| ! | AATCAAACTCAGTTAATCAT+GGG | + | chr1_2:6214714-6214733 | None:intergenic | 25.0% |
| ! | TAATCAAACTCAGTTAATCA+TGG | + | chr1_2:6214715-6214734 | None:intergenic | 25.0% |
| ! | TGATTAACTGAGTTTGATTA+AGG | - | chr1_2:6214715-6214734 | Msa0052030:intron | 25.0% |
| !! | TTAAGGAACATGATAGTTTT+TGG | - | chr1_2:6214732-6214751 | Msa0052030:intron | 25.0% |
| ! | ATGACAATAGTAAATGTTTG+TGG | - | chr1_2:6215094-6215113 | Msa0052030:intron | 25.0% |
| ! | TAACACTCTAATTCTTTCAT+TGG | - | chr1_2:6215146-6215165 | Msa0052030:intron | 25.0% |
| !!! | TTCATTGGTTTTAAACTGTT+TGG | - | chr1_2:6215161-6215180 | Msa0052030:intron | 25.0% |
| !! | AATTTTATACTGTGTTGCAT+TGG | - | chr1_2:6215379-6215398 | Msa0052030:intron | 25.0% |
| !! | ATTTTATACTGTGTTGCATT+GGG | - | chr1_2:6215380-6215399 | Msa0052030:intron | 25.0% |
| ! | AATATGGAATAAAAATTCCC+TGG | + | chr1_2:6215470-6215489 | None:intergenic | 25.0% |
| !! | AGTATTCTGACTTTCTAAAA+TGG | - | chr1_2:6215514-6215533 | Msa0052030:intron | 25.0% |
| ! | ACAATATGGTTTAGATACAT+TGG | + | chr1_2:6215675-6215694 | None:intergenic | 25.0% |
| ! | TTGAATAAAAATCATCTGTC+TGG | - | chr1_2:6215798-6215817 | Msa0052030:intron | 25.0% |
| !!! | TTTTGCTTGTTGATTTGTCT+GGG | + | chr1_2:6212907-6212926 | None:intergenic | 30.0% |
| AAACATGGAAAATCCTACAA+CGG | - | chr1_2:6212971-6212990 | Msa0052030:CDS | 30.0% | |
| ! | AGAGTATAGAAGCAAGTTTT+TGG | - | chr1_2:6213117-6213136 | Msa0052030:CDS | 30.0% |
| ! | GAGTATAGAAGCAAGTTTTT+GGG | - | chr1_2:6213118-6213137 | Msa0052030:CDS | 30.0% |
| TTTCCAGATATTGTTACACA+TGG | + | chr1_2:6213553-6213572 | None:intergenic | 30.0% | |
| ! | TGGATTTCCTTATTTGCTTT+GGG | - | chr1_2:6213780-6213799 | Msa0052030:intron | 30.0% |
| ATGAAATCCCAAAGCAAATA+AGG | + | chr1_2:6213790-6213809 | None:intergenic | 30.0% | |
| GCAAATCAAAATCAATCGTA+TGG | + | chr1_2:6214099-6214118 | None:intergenic | 30.0% | |
| CCATGTTATGATTGATTGAT+AGG | + | chr1_2:6214336-6214355 | None:intergenic | 30.0% | |
| CCTATCAATCAATCATAACA+TGG | - | chr1_2:6214333-6214352 | Msa0052030:CDS | 30.0% | |
| GTAGATAATCATGTATCATG+TGG | - | chr1_2:6214502-6214521 | Msa0052030:intron | 30.0% | |
| TACTTCTGCTCAAGAAATAA+AGG | + | chr1_2:6214659-6214678 | None:intergenic | 30.0% | |
| ATCAAACTCAGTTAATCATG+GGG | + | chr1_2:6214713-6214732 | None:intergenic | 30.0% | |
| GGAATAAATAAGATTGTGAC+AGG | - | chr1_2:6214869-6214888 | Msa0052030:intron | 30.0% | |
| ! | ATTACTGATGATGAACTCAA+AGG | + | chr1_2:6214981-6215000 | None:intergenic | 30.0% |
| ! | TTTGAGTTCATCATCAGTAA+TGG | - | chr1_2:6214980-6214999 | Msa0052030:intron | 30.0% |
| ATAACGTCATATTCATGTCA+TGG | - | chr1_2:6215403-6215422 | Msa0052030:intron | 30.0% | |
| ATTGCGTGATTATGTGAATA+TGG | + | chr1_2:6215486-6215505 | None:intergenic | 30.0% | |
| TACTAGGGATATCTTTCATT+CGG | + | chr1_2:6215607-6215626 | None:intergenic | 30.0% | |
| TTTGTCTCTATCGAATGTAT+AGG | + | chr1_2:6215761-6215780 | None:intergenic | 30.0% | |
| ATTGGATTGTGAGAAATTCA+TGG | - | chr1_2:6216048-6216067 | Msa0052030:CDS | 30.0% | |
| TTGGATTGTGAGAAATTCAT+GGG | - | chr1_2:6216049-6216068 | Msa0052030:CDS | 30.0% | |
| CCATTCTTAATTGGATAAGA+TGG | + | chr1_2:6216161-6216180 | None:intergenic | 30.0% | |
| CCATCTTATCCAATTAAGAA+TGG | - | chr1_2:6216158-6216177 | Msa0052030:CDS | 30.0% | |
| !!! | CTTTTGCTTGTTGATTTGTC+TGG | + | chr1_2:6212908-6212927 | None:intergenic | 35.0% |
| GTTTAGGTGAGAAAGACAAA+AGG | - | chr1_2:6212993-6213012 | Msa0052030:CDS | 35.0% | |
| AATTTCTTCATCCTACGGTT+CGG | + | chr1_2:6213157-6213176 | None:intergenic | 35.0% | |
| AACCGTAGGATGAAGAAATT+GGG | - | chr1_2:6213157-6213176 | Msa0052030:CDS | 35.0% | |
| AATTGCCTGAATCTGTTGAT+TGG | - | chr1_2:6213221-6213240 | Msa0052030:CDS | 35.0% | |
| CAGATATTGTTACACATGGA+TGG | + | chr1_2:6213549-6213568 | None:intergenic | 35.0% | |
| CATCCATGTGTAACAATATC+TGG | - | chr1_2:6213547-6213566 | Msa0052030:intron | 35.0% | |
| CTTGATCCTGATAATTCATC+TGG | - | chr1_2:6213760-6213779 | Msa0052030:intron | 35.0% | |
| GGAAATCCAGATGAATTATC+AGG | + | chr1_2:6213769-6213788 | None:intergenic | 35.0% | |
| ! | CTGGATTTCCTTATTTGCTT+TGG | - | chr1_2:6213779-6213798 | Msa0052030:intron | 35.0% |
| CATACATACACCAAGAAACT+GGG | + | chr1_2:6213974-6213993 | None:intergenic | 35.0% | |
| ACATACATACACCAAGAAAC+TGG | + | chr1_2:6213975-6213994 | None:intergenic | 35.0% | |
| ! | AGTTTCTTGGTGTATGTATG+TGG | - | chr1_2:6213974-6213993 | Msa0052030:CDS | 35.0% |
| ! | TAAAATTTTGTCACCGGGTA+AGG | + | chr1_2:6214000-6214019 | None:intergenic | 35.0% |
| TTAATGATCTGAGAGTTAGG+AGG | + | chr1_2:6214049-6214068 | None:intergenic | 35.0% | |
| GTAGTCATATAAGGTCTGTT+TGG | - | chr1_2:6214188-6214207 | Msa0052030:CDS | 35.0% | |
| ! | CCAAGAATTCTGGTGATTTT+AGG | + | chr1_2:6214267-6214286 | None:intergenic | 35.0% |
| CCTAAAATCACCAGAATTCT+TGG | - | chr1_2:6214264-6214283 | Msa0052030:CDS | 35.0% | |
| CAAATGCAAACCAAGAATTC+TGG | + | chr1_2:6214277-6214296 | None:intergenic | 35.0% | |
| ! | CCTTAAAAGTTTTACGACGA+CGG | - | chr1_2:6214429-6214448 | Msa0052030:intron | 35.0% |
| ! | TTTTCAATGAAGGGAGTTGT+TGG | - | chr1_2:6214819-6214838 | Msa0052030:intron | 35.0% |
| TTTCAATGAAGGGAGTTGTT+GGG | - | chr1_2:6214820-6214839 | Msa0052030:intron | 35.0% | |
| TTCACTATCAGAACAAGAAC+TGG | - | chr1_2:6214901-6214920 | Msa0052030:intron | 35.0% | |
| TGTGATACATCATACAACGA+AGG | - | chr1_2:6214929-6214948 | Msa0052030:intron | 35.0% | |
| !! | TACCATCAATAGCCTTGTAA+GGG | + | chr1_2:6215030-6215049 | None:intergenic | 35.0% |
| GTGGAAGATAGTTAATCAGT+AGG | - | chr1_2:6215113-6215132 | Msa0052030:intron | 35.0% | |
| TGTTCCTGCTTATGATGAAT+TGG | - | chr1_2:6215241-6215260 | Msa0052030:intron | 35.0% | |
| ATAAAAATTCCCTGGAGTCA+GGG | + | chr1_2:6215462-6215481 | None:intergenic | 35.0% | |
| AATAAAAATTCCCTGGAGTC+AGG | + | chr1_2:6215463-6215482 | None:intergenic | 35.0% | |
| GATTCAAAGCATGTTTCAGA+TGG | - | chr1_2:6215536-6215555 | Msa0052030:intron | 35.0% | |
| ATGAAAGATATCCCTAGTAG+TGG | - | chr1_2:6215608-6215627 | Msa0052030:intron | 35.0% | |
| ATGCTATATAGCCACTACTA+GGG | + | chr1_2:6215622-6215641 | None:intergenic | 35.0% | |
| TATCGAATGTATAGGCAATG+AGG | + | chr1_2:6215753-6215772 | None:intergenic | 35.0% | |
| GGCTATTGAAGATAATGTGA+AGG | + | chr1_2:6215846-6215865 | None:intergenic | 35.0% | |
| TTGACTTTGCTTCACAAGAT+TGG | - | chr1_2:6215883-6215902 | Msa0052030:intron | 35.0% | |
| TATTCCATTTGTCTCTTGTC+AGG | - | chr1_2:6215944-6215963 | Msa0052030:CDS | 35.0% | |
| ATTCCATTTGTCTCTTGTCA+GGG | - | chr1_2:6215945-6215964 | Msa0052030:CDS | 35.0% | |
| CAGAAAACGGGAAAGATTAT+TGG | - | chr1_2:6216030-6216049 | Msa0052030:CDS | 35.0% | |
| TGGATTGTGAGAAATTCATG+GGG | - | chr1_2:6216050-6216069 | Msa0052030:CDS | 35.0% | |
| TGTTGCTGTATTTACGAGTA+TGG | - | chr1_2:6216275-6216294 | Msa0052030:CDS | 35.0% | |
| CATAGTCAACACTTCTTCGT+TGG | + | chr1_2:6212933-6212952 | None:intergenic | 40.0% | |
| ! | TGTTGACTATGTACGAAGAG+TGG | - | chr1_2:6212942-6212961 | Msa0052030:CDS | 40.0% |
| GAAGAGTGGTTAGTGAAACA+TGG | - | chr1_2:6212956-6212975 | Msa0052030:CDS | 40.0% | |
| GGAAAATCCTACAACGGTTT+AGG | - | chr1_2:6212977-6212996 | Msa0052030:CDS | 40.0% | |
| TTTCTCACCTAAACCGTTGT+AGG | + | chr1_2:6212987-6213006 | None:intergenic | 40.0% | |
| CATATAGATTAGGGTTGACC+CGG | - | chr1_2:6213074-6213093 | Msa0052030:CDS | 40.0% | |
| CTTGCTTCTATACTCTTCGT+TGG | + | chr1_2:6213113-6213132 | None:intergenic | 40.0% | |
| GAACCGTAGGATGAAGAAAT+TGG | - | chr1_2:6213156-6213175 | Msa0052030:CDS | 40.0% | |
| CACCCAATTTCTTCATCCTA+CGG | + | chr1_2:6213162-6213181 | None:intergenic | 40.0% | |
| TGAAGAAATTGGGTGGTTCT+AGG | - | chr1_2:6213167-6213186 | Msa0052030:CDS | 40.0% | |
| TTCCTCCAATCAACAGATTC+AGG | + | chr1_2:6213229-6213248 | None:intergenic | 40.0% | |
| ! | TGAATCTGTTGATTGGAGGA+AGG | - | chr1_2:6213228-6213247 | Msa0052030:CDS | 40.0% |
| AAAAATTATGGCACCCTTCC+CGG | + | chr1_2:6213929-6213948 | None:intergenic | 40.0% | |
| !!! | GGAAGGGTGCCATAATTTTT+TGG | - | chr1_2:6213929-6213948 | Msa0052030:CDS | 40.0% |
| TGTAAGATATCCATCAGCTG+TGG | + | chr1_2:6214244-6214263 | None:intergenic | 40.0% | |
| ! | CCGTCGTCGTAAAACTTTTA+AGG | + | chr1_2:6214432-6214451 | None:intergenic | 40.0% |
| ACTATCAGAACAAGAACTGG+TGG | - | chr1_2:6214904-6214923 | Msa0052030:intron | 40.0% | |
| TCATACAACGAAGGATGCAA+TGG | - | chr1_2:6214938-6214957 | Msa0052030:intron | 40.0% | |
| GAGTTCATCATCAGTAATGG+TGG | - | chr1_2:6214983-6215002 | Msa0052030:intron | 40.0% | |
| TGAAGAGGATTACCCTTACA+AGG | - | chr1_2:6215015-6215034 | Msa0052030:intron | 40.0% | |
| TACCCTTACAAGGCTATTGA+TGG | - | chr1_2:6215025-6215044 | Msa0052030:intron | 40.0% | |
| !! | CTACCATCAATAGCCTTGTA+AGG | + | chr1_2:6215031-6215050 | None:intergenic | 40.0% |
| CCAATTAACTAACCCTGTTC+TGG | + | chr1_2:6215060-6215079 | None:intergenic | 40.0% | |
| !! | CCAGAACAGGGTTAGTTAAT+TGG | - | chr1_2:6215057-6215076 | Msa0052030:intron | 40.0% |
| AAGGCCAATTCATCATAAGC+AGG | + | chr1_2:6215248-6215267 | None:intergenic | 40.0% | |
| !! | TGATGAATTGGCCTTGCAAA+AGG | - | chr1_2:6215253-6215272 | Msa0052030:intron | 40.0% |
| AACCAAATTCTCTGCAGTCA+GGG | + | chr1_2:6215438-6215457 | None:intergenic | 40.0% | |
| AAACCAAATTCTCTGCAGTC+AGG | + | chr1_2:6215439-6215458 | None:intergenic | 40.0% | |
| GCAATCACGCTTTGTGATTT+CGG | + | chr1_2:6215563-6215582 | None:intergenic | 40.0% | |
| CATGCTATATAGCCACTACT+AGG | + | chr1_2:6215623-6215642 | None:intergenic | 40.0% | |
| CTAGTAGTGGCTATATAGCA+TGG | - | chr1_2:6215621-6215640 | Msa0052030:intron | 40.0% | |
| AAAATCATCTGTCTGGCAAG+TGG | - | chr1_2:6215805-6215824 | Msa0052030:intron | 40.0% | |
| TCTTGTCAGGGTGTATTTAC+CGG | - | chr1_2:6215957-6215976 | Msa0052030:CDS | 40.0% | |
| GTTGGATACGGTACAGAAAA+CGG | - | chr1_2:6216017-6216036 | Msa0052030:CDS | 40.0% | |
| TTGGATACGGTACAGAAAAC+GGG | - | chr1_2:6216018-6216037 | Msa0052030:CDS | 40.0% | |
| ATTGTGAGAAATTCATGGGG+TGG | - | chr1_2:6216053-6216072 | Msa0052030:CDS | 40.0% | |
| GGGTTCTGTCCATTCTTAAT+TGG | + | chr1_2:6216170-6216189 | None:intergenic | 40.0% | |
| ! | ATGGAAGATCTTGCTTTGAG+TGG | - | chr1_2:6216294-6216313 | Msa0052030:CDS | 40.0% |
| ! | TGGAAGATCTTGCTTTGAGT+GGG | - | chr1_2:6216295-6216314 | Msa0052030:CDS | 40.0% |
| GGCTAGTGAAACTGTGAAAG+TGG | + | chr1_2:6212849-6212868 | None:intergenic | 45.0% | |
| GGAGATGATCGACATGTCTA+AGG | + | chr1_2:6212870-6212889 | None:intergenic | 45.0% | |
| !! | GCTTGTTGATTTGTCTGGGT+GGG | + | chr1_2:6212903-6212922 | None:intergenic | 45.0% |
| !! | TGCTTGTTGATTTGTCTGGG+TGG | + | chr1_2:6212904-6212923 | None:intergenic | 45.0% |
| CGTAGGATGAAGAAATTGGG+TGG | - | chr1_2:6213160-6213179 | Msa0052030:CDS | 45.0% | |
| ! | TGCCTGAATCTGTTGATTGG+AGG | - | chr1_2:6213224-6213243 | Msa0052030:CDS | 45.0% |
| ! | TCTGTTGATTGGAGGAAGGA+AGG | - | chr1_2:6213232-6213251 | Msa0052030:CDS | 45.0% |
| GTCAAAGACCAAGCAAGTTG+TGG | - | chr1_2:6213268-6213287 | Msa0052030:intron | 45.0% | |
| ! | AGTGCTTACCACAACTTGCT+TGG | + | chr1_2:6213279-6213298 | None:intergenic | 45.0% |
| ACTCCCCGCATAAGTTAAGT+AGG | - | chr1_2:6213901-6213920 | Msa0052030:CDS | 45.0% | |
| CTCCCCGCATAAGTTAAGTA+GGG | - | chr1_2:6213902-6213921 | Msa0052030:CDS | 45.0% | |
| GACCCTACTTAACTTATGCG+GGG | + | chr1_2:6213907-6213926 | None:intergenic | 45.0% | |
| GGACCCTACTTAACTTATGC+GGG | + | chr1_2:6213908-6213927 | None:intergenic | 45.0% | |
| CGGACCCTACTTAACTTATG+CGG | + | chr1_2:6213909-6213928 | None:intergenic | 45.0% | |
| CGCATAAGTTAAGTAGGGTC+CGG | - | chr1_2:6213907-6213926 | Msa0052030:CDS | 45.0% | |
| GCATAAGTTAAGTAGGGTCC+GGG | - | chr1_2:6213908-6213927 | Msa0052030:CDS | 45.0% | |
| ! | TGTATGTATGTGGCCTTACC+CGG | - | chr1_2:6213984-6214003 | Msa0052030:CDS | 45.0% |
| AGTATCATCACCACAGCTGA+TGG | - | chr1_2:6214231-6214250 | Msa0052030:CDS | 45.0% | |
| CTCAGTTAATCATGGGGTGA+AGG | + | chr1_2:6214707-6214726 | None:intergenic | 45.0% | |
| TACAACGAAGGATGCAATGG+TGG | - | chr1_2:6214941-6214960 | Msa0052030:intron | 45.0% | |
| !! | AGGATGCAATGGTGGACTTA+TGG | - | chr1_2:6214949-6214968 | Msa0052030:intron | 45.0% |
| ATGGTAGATGTGACCAGAAC+AGG | - | chr1_2:6215044-6215063 | Msa0052030:intron | 45.0% | |
| TGGTAGATGTGACCAGAACA+GGG | - | chr1_2:6215045-6215064 | Msa0052030:intron | 45.0% | |
| ! | GTTTGCAACAGCCTTTTGCA+AGG | + | chr1_2:6215267-6215286 | None:intergenic | 45.0% |
| TTCCCTGACTGCAGAGAATT+TGG | - | chr1_2:6215433-6215452 | Msa0052030:intron | 45.0% | |
| ! | AATTTGGTTTCCCTGACTCC+AGG | - | chr1_2:6215449-6215468 | Msa0052030:intron | 45.0% |
| ! | ATTTGGTTTCCCTGACTCCA+GGG | - | chr1_2:6215450-6215469 | Msa0052030:intron | 45.0% |
| ACACCCTGACAAGAGACAAA+TGG | + | chr1_2:6215951-6215970 | None:intergenic | 45.0% | |
| GGTGTATTTACCGGTAGATG+TGG | - | chr1_2:6215966-6215985 | Msa0052030:CDS | 45.0% | |
| ! | TAGTGCTGTTCCACATCTAC+CGG | + | chr1_2:6215979-6215998 | None:intergenic | 45.0% |
| AAATTCATGGGGTGGTAGCT+GGG | - | chr1_2:6216061-6216080 | Msa0052030:CDS | 45.0% | |
| ! | AATCTAGCTTCAAGCAGAGC+AGG | - | chr1_2:6216113-6216132 | Msa0052030:CDS | 45.0% |
| TTGATAGGTGAAGGTGGTGA+TGG | + | chr1_2:6216206-6216225 | None:intergenic | 45.0% | |
| TAGTAGCTGTCACAGACAGA+TGG | + | chr1_2:6216233-6216252 | None:intergenic | 45.0% | |
| ! | GGAAGATCTTGCTTTGAGTG+GGG | - | chr1_2:6216296-6216315 | Msa0052030:CDS | 45.0% |
| CACAGACAGGATACTCATGA+GGG | + | chr1_2:6216373-6216392 | None:intergenic | 45.0% | |
| TCACAGACAGGATACTCATG+AGG | + | chr1_2:6216374-6216393 | None:intergenic | 45.0% | |
| !!! | TAATTTTAAAATTAAATACA+AGG | - | chr1_2:6213639-6213658 | Msa0052030:intron | 5.0% |
| CAAAGATCGATCCGAACCGT+AGG | - | chr1_2:6213143-6213162 | Msa0052030:CDS | 50.0% | |
| AATCGTTATGCGCCACGTGT+CGG | - | chr1_2:6213193-6213212 | Msa0052030:CDS | 50.0% | |
| GGCAATTTATCACCGACACG+TGG | + | chr1_2:6213208-6213227 | None:intergenic | 50.0% | |
| !! | AGGAAGGAAGGTGCTGTTGT+TGG | - | chr1_2:6213244-6213263 | Msa0052030:intron | 50.0% |
| AAGTTAAGTAGGGTCCGGGA+AGG | - | chr1_2:6213912-6213931 | Msa0052030:CDS | 50.0% | |
| AGTTAAGTAGGGTCCGGGAA+GGG | - | chr1_2:6213913-6213932 | Msa0052030:CDS | 50.0% | |
| CGCAGTCTTACCCAGTTTCT+TGG | - | chr1_2:6213961-6213980 | Msa0052030:CDS | 50.0% | |
| TCAGCAATCGCAGCTGTTGA+AGG | - | chr1_2:6214848-6214867 | Msa0052030:intron | 50.0% | |
| !! | TGGTGGCATTGACTCTGAAG+AGG | - | chr1_2:6215000-6215019 | Msa0052030:intron | 50.0% |
| TGTGGAACAGCACTAGACCA+TGG | - | chr1_2:6215984-6216003 | Msa0052030:CDS | 50.0% | |
| ATCCAACAGCTGCAACACCA+TGG | + | chr1_2:6216004-6216023 | None:intergenic | 50.0% | |
| ! | GGTGTTGCAGCTGTTGGATA+CGG | - | chr1_2:6216005-6216024 | Msa0052030:CDS | 50.0% |
| GAAATTCATGGGGTGGTAGC+TGG | - | chr1_2:6216060-6216079 | Msa0052030:CDS | 50.0% | |
| AATTCATGGGGTGGTAGCTG+GGG | - | chr1_2:6216062-6216081 | Msa0052030:CDS | 50.0% | |
| TCAAGCAGAGCAGGAAAGTG+TGG | - | chr1_2:6216122-6216141 | Msa0052030:CDS | 50.0% | |
| ! | GATGGTGGCTTGATAGGTGA+AGG | + | chr1_2:6216215-6216234 | None:intergenic | 50.0% |
| ! | CAGACAGATGGTGGCTTGAT+AGG | + | chr1_2:6216221-6216240 | None:intergenic | 50.0% |
| TAGCTGTCACAGACAGATGG+TGG | + | chr1_2:6216230-6216249 | None:intergenic | 50.0% | |
| AGCTACTACAGCTGTGCTGA+AGG | - | chr1_2:6216245-6216264 | Msa0052030:CDS | 50.0% | |
| CAGCAAGTAGCAGACTCAAG+AGG | + | chr1_2:6216329-6216348 | None:intergenic | 50.0% | |
| !! | GTCTGGGTGGGTTTTGTCGT+AGG | + | chr1_2:6212891-6212910 | None:intergenic | 55.0% |
| ! | ATTAGGGTTGACCCGGTTCG+CGG | - | chr1_2:6213081-6213100 | Msa0052030:CDS | 55.0% |
| GTTGGTTAGATCCGCGAACC+GGG | + | chr1_2:6213095-6213114 | None:intergenic | 55.0% | |
| ! | CGTTGGTTAGATCCGCGAAC+CGG | + | chr1_2:6213096-6213115 | None:intergenic | 55.0% |
| CCTTCAACAGCAACGGCGAT+AGG | + | chr1_2:6215293-6215312 | None:intergenic | 55.0% | |
| ! | CCTATCGCCGTTGCTGTTGA+AGG | - | chr1_2:6215290-6215309 | Msa0052030:intron | 55.0% |
| ! | ATCGCCGTTGCTGTTGAAGG+AGG | - | chr1_2:6215293-6215312 | Msa0052030:intron | 55.0% |
| ACCGCCTCCTTCAACAGCAA+CGG | + | chr1_2:6215300-6215319 | None:intergenic | 55.0% | |
| ! | TTGCTGTTGAAGGAGGCGGT+AGG | - | chr1_2:6215300-6215319 | Msa0052030:intron | 55.0% |
| TGCTGTTGAAGGAGGCGGTA+GGG | - | chr1_2:6215301-6215320 | Msa0052030:intron | 55.0% | |
| !! | GACCATGGTGTTGCAGCTGT+TGG | - | chr1_2:6215999-6216018 | Msa0052030:CDS | 55.0% |
| !! | TGGTGATGGTCCAGGGTTAG+GGG | + | chr1_2:6216192-6216211 | None:intergenic | 55.0% |
| !! | GTGGTGATGGTCCAGGGTTA+GGG | + | chr1_2:6216193-6216212 | None:intergenic | 55.0% |
| !! | GTGAAGGTGGTGATGGTCCA+GGG | + | chr1_2:6216199-6216218 | None:intergenic | 55.0% |
| GGTGGCTTGATAGGTGAAGG+TGG | + | chr1_2:6216212-6216231 | None:intergenic | 55.0% | |
| !! | TGCGGGGAGTTTTAGTGCGC+AGG | + | chr1_2:6213891-6213910 | None:intergenic | 60.0% |
| CAACAGCAACGGCGATAGGC+TGG | + | chr1_2:6215289-6215308 | None:intergenic | 60.0% | |
| ! | GCCGTTGCTGTTGAAGGAGG+CGG | - | chr1_2:6215296-6215315 | Msa0052030:intron | 60.0% |
| GGTGGTAGCTGGGGTGAACA+AGG | - | chr1_2:6216071-6216090 | Msa0052030:CDS | 60.0% | |
| GTGATGGTCCAGGGTTAGGG+GGG | + | chr1_2:6216190-6216209 | None:intergenic | 60.0% | |
| ! | GGTGATGGTCCAGGGTTAGG+GGG | + | chr1_2:6216191-6216210 | None:intergenic | 60.0% |
| !! | GGTGGTGATGGTCCAGGGTT+AGG | + | chr1_2:6216194-6216213 | None:intergenic | 60.0% |
| !! | GGTGAAGGTGGTGATGGTCC+AGG | + | chr1_2:6216200-6216219 | None:intergenic | 60.0% |
| CCAGCACGAGTGTCACAGAC+AGG | + | chr1_2:6216386-6216405 | None:intergenic | 60.0% | |
| CCTGTCTGTGACACTCGTGC+TGG | - | chr1_2:6216383-6216402 | Msa0052030:CDS | 60.0% | |
| GGACAGAACCCCCCTAACCC+TGG | - | chr1_2:6216179-6216198 | Msa0052030:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 6212806 | 6216418 | 6212806 | ID=Msa0052030;Name=Msa0052030 |
| chr1_2 | mRNA | 6212806 | 6216418 | 6212806 | ID=Msa0052030-mRNA-1;Parent=Msa0052030;Name=Msa0052030-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|4|0|438 |
| chr1_2 | exon | 6215935 | 6216418 | 6215935 | ID=Msa0052030-mRNA-1:exon:1992;Parent=Msa0052030-mRNA-1 |
| chr1_2 | exon | 6214158 | 6214393 | 6214158 | ID=Msa0052030-mRNA-1:exon:1991;Parent=Msa0052030-mRNA-1 |
| chr1_2 | exon | 6213881 | 6214021 | 6213881 | ID=Msa0052030-mRNA-1:exon:1990;Parent=Msa0052030-mRNA-1 |
| chr1_2 | exon | 6212806 | 6213258 | 6212806 | ID=Msa0052030-mRNA-1:exon:1989;Parent=Msa0052030-mRNA-1 |
| chr1_2 | CDS | 6215935 | 6216418 | 6215935 | ID=Msa0052030-mRNA-1:cds;Parent=Msa0052030-mRNA-1 |
| chr1_2 | CDS | 6214158 | 6214393 | 6214158 | ID=Msa0052030-mRNA-1:cds;Parent=Msa0052030-mRNA-1 |
| chr1_2 | CDS | 6213881 | 6214021 | 6213881 | ID=Msa0052030-mRNA-1:cds;Parent=Msa0052030-mRNA-1 |
| chr1_2 | CDS | 6212806 | 6213258 | 6212806 | ID=Msa0052030-mRNA-1:cds;Parent=Msa0052030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
