AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1025610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025610 MtrunA17_Chr7g0243801 58.248 491 122 9 222 635 1 485 0.0 536
Msa1025610 MtrunA17_Chr7g0243871 54.658 483 148 8 222 635 1 481 1.68e-167 487
Msa1025610 MtrunA17_Chr7g0243761 60.554 469 134 10 222 640 1 468 9.59e-166 482
Msa1025610 MtrunA17_Chr7g0235051 55.741 479 140 9 222 640 1 467 2.42e-156 458
Msa1025610 MtrunA17_Chr7g0243851 54.978 462 159 10 222 640 1 456 3.12e-156 457
Msa1025610 MtrunA17_Chr7g0243681 75.862 261 60 1 222 479 1 261 2.05e-139 416
Msa1025610 MtrunA17_Chr7g0243681 81.529 157 28 1 483 638 335 491 2.01e-79 260
Msa1025610 MtrunA17_Chr7g0243631 71.014 276 77 1 223 495 4 279 2.40e-136 408
Msa1025610 MtrunA17_Chr7g0243631 66.047 215 61 5 436 640 288 500 5.88e-80 262
Msa1025610 MtrunA17_Chr4g0060511 69.373 271 77 2 222 486 1 271 3.15e-134 402
Msa1025610 MtrunA17_Chr4g0060511 62.241 241 67 5 408 640 277 501 3.16e-90 289
Msa1025610 MtrunA17_Chr7g0243951 68.478 276 68 2 222 486 1 268 4.07e-131 394
Msa1025610 MtrunA17_Chr7g0243951 66.197 213 62 3 436 640 287 497 3.92e-83 270
Msa1025610 MtrunA17_Chr7g0243861 69.288 267 79 1 223 486 5 271 9.46e-130 391
Msa1025610 MtrunA17_Chr7g0243861 69.159 214 55 4 436 640 290 501 1.30e-80 263
Msa1025610 MtrunA17_Chr7g0243771 72.908 251 65 1 229 476 3 253 1.51e-129 390
Msa1025610 MtrunA17_Chr7g0243771 66.029 209 60 4 436 635 278 484 8.30e-82 266
Msa1025610 MtrunA17_Chr7g0243931 63.103 290 87 3 218 495 3 284 1.78e-123 375
Msa1025610 MtrunA17_Chr7g0243931 66.822 214 60 4 436 640 293 504 5.53e-83 270
Msa1025610 MtrunA17_Chr7g0243781 62.195 246 90 1 230 472 7 252 9.53e-104 323
Msa1025610 MtrunA17_Chr7g0243781 56.540 237 79 5 408 635 263 484 2.81e-71 238
Msa1025610 MtrunA17_Chr7g0243921 65.639 227 68 3 207 428 13 234 1.42e-94 291
Msa1025610 MtrunA17_Chr7g0243811 58.261 230 94 1 244 473 1 228 3.20e-84 270
Msa1025610 MtrunA17_Chr7g0243811 49.080 163 61 4 408 563 238 385 1.41e-36 141
Msa1025610 MtrunA17_Chr7g0243711 65.566 212 66 2 436 640 119 330 1.30e-83 266
Msa1025610 MtrunA17_Chr7g0243711 76.667 90 20 1 222 311 1 89 5.72e-38 143
Msa1025610 MtrunA17_Chr5g0401851 43.542 271 146 2 230 493 8 278 2.88e-71 238
Msa1025610 MtrunA17_Chr5g0401851 44.444 207 103 4 436 633 287 490 8.71e-52 186
Msa1025610 MtrunA17_Chr8g0355221 43.704 270 146 4 229 493 12 280 3.08e-71 239
Msa1025610 MtrunA17_Chr8g0355221 55.882 170 67 2 471 633 325 493 5.61e-57 200
Msa1025610 MtrunA17_Chr4g0066141 38.462 390 189 10 260 635 8 360 1.99e-70 232
Msa1025610 MtrunA17_Chr5g0416741 43.704 270 147 2 229 493 10 279 2.51e-70 236
Msa1025610 MtrunA17_Chr5g0416741 58.108 148 61 1 483 630 341 487 1.65e-53 191
Msa1025610 MtrunA17_Chr7g0243911 58.685 213 62 6 408 611 20 215 4.19e-69 224
Msa1025610 MtrunA17_Chr7g0275681 29.832 476 246 6 232 626 12 480 1.76e-68 231
Msa1025610 MtrunA17_Chr6g0463891 45.312 256 135 3 231 481 11 266 5.28e-66 224
Msa1025610 MtrunA17_Chr6g0463891 55.844 154 68 0 483 636 341 494 7.19e-54 192
Msa1025610 MtrunA17_Chr1g0165701 43.284 268 145 5 231 493 14 279 1.20e-65 224
Msa1025610 MtrunA17_Chr1g0165701 60.256 156 61 1 483 638 341 495 8.35e-58 202
Msa1025610 MtrunA17_Chr5g0416821 39.007 282 162 4 220 493 2 281 8.27e-60 207
Msa1025610 MtrunA17_Chr5g0416821 48.235 170 66 3 471 633 326 480 4.00e-42 159
Msa1025610 MtrunA17_Chr4g0044481 32.151 423 190 7 210 559 5 403 9.80e-58 200
Msa1025610 MtrunA17_Chr7g0243611 63.448 145 36 2 347 488 1 131 3.41e-51 179
Msa1025610 MtrunA17_Chr7g0243611 80.000 95 19 0 483 577 201 295 6.30e-47 167
Msa1025610 MtrunA17_Chr8g0366391 34.084 311 189 5 229 531 6 308 2.14e-46 171
Msa1025610 MtrunA17_Chr8g0366391 46.296 162 68 3 484 638 340 489 1.58e-37 146
Msa1025610 MtrunA17_Chr4g0044501 34.783 253 158 2 229 474 7 259 7.96e-44 164
Msa1025610 MtrunA17_Chr4g0044501 48.649 185 83 6 450 629 301 478 1.59e-40 154
Msa1025610 MtrunA17_Chr4g0044511 32.192 292 167 6 209 482 10 288 1.34e-43 164
Msa1025610 MtrunA17_Chr4g0044511 48.684 152 74 2 477 628 359 506 1.31e-40 155
Msa1025610 MtrunA17_Chr4g0044521 42.995 207 108 4 432 629 264 469 6.45e-43 160
Msa1025610 MtrunA17_Chr4g0044521 33.708 267 143 8 226 481 3 246 9.62e-34 134
Msa1025610 MtrunA17_Chr7g0243731 86.076 79 11 0 483 561 1 79 1.14e-42 148
Msa1025610 MtrunA17_Chr7g0231651 41.089 202 111 3 220 415 2 201 2.12e-42 152
Msa1025610 MtrunA17_Chr8g0374901 50.993 151 74 0 485 635 337 487 2.95e-42 159
Msa1025610 MtrunA17_Chr8g0374901 35.019 257 149 6 231 482 11 254 3.96e-35 139
Msa1025610 MtrunA17_Chr7g0231631 51.007 149 58 2 482 630 130 263 2.04e-41 151
Msa1025610 MtrunA17_Chr7g0265041 37.407 270 159 6 222 483 1 268 2.97e-41 157
Msa1025610 MtrunA17_Chr7g0265041 41.935 155 84 3 474 626 338 488 4.82e-32 130
Msa1025610 MtrunA17_Chr8g0374931 50.676 148 73 0 486 633 341 488 3.71e-41 156
Msa1025610 MtrunA17_Chr8g0374931 32.258 279 160 7 222 487 1 263 3.92e-33 133
Msa1025610 MtrunA17_Chr5g0428081 50.685 146 72 0 488 633 341 486 9.62e-41 155
Msa1025610 MtrunA17_Chr5g0428081 28.295 258 166 5 231 481 10 255 1.32e-23 104
Msa1025610 MtrunA17_Chr4g0066261 49.351 154 66 3 488 635 343 490 1.04e-40 155
Msa1025610 MtrunA17_Chr4g0066261 33.591 259 155 5 231 482 10 258 9.15e-37 144
Msa1025610 MtrunA17_Chr8g0374971 49.664 149 75 0 485 633 339 487 1.75e-40 154
Msa1025610 MtrunA17_Chr8g0374971 34.884 258 148 6 231 481 11 255 4.97e-35 139
Msa1025610 MtrunA17_Chr1g0179901 33.588 262 163 5 229 482 13 271 3.74e-40 154
Msa1025610 MtrunA17_Chr1g0179901 37.912 182 96 3 459 633 329 500 1.12e-35 140
Msa1025610 MtrunA17_Chr4g0066221 35.000 260 146 6 231 481 10 255 3.89e-40 153
Msa1025610 MtrunA17_Chr4g0066221 44.134 179 79 5 472 635 317 489 4.91e-40 153
Msa1025610 MtrunA17_Chr7g0218311 49.324 148 75 0 488 635 345 492 4.16e-40 153
Msa1025610 MtrunA17_Chr7g0218311 30.657 274 163 8 231 493 15 272 1.31e-26 114
Msa1025610 MtrunA17_Chr4g0011051 41.401 157 89 2 475 630 337 491 5.05e-40 153
Msa1025610 MtrunA17_Chr4g0011051 34.307 274 160 8 230 491 7 272 8.27e-32 129
Msa1025610 MtrunA17_Chr7g0265141 38.095 210 109 5 431 625 281 484 6.30e-40 152
Msa1025610 MtrunA17_Chr7g0265141 32.331 266 171 5 229 486 6 270 1.30e-33 134
Msa1025610 MtrunA17_Chr4g0066171 46.154 156 78 2 483 635 333 485 1.68e-39 151
Msa1025610 MtrunA17_Chr4g0066171 34.532 278 138 10 231 493 20 268 3.46e-34 136
Msa1025610 MtrunA17_Chr4g0066201 46.358 151 81 0 483 633 331 481 1.76e-39 151
Msa1025610 MtrunA17_Chr4g0066201 35.273 275 141 7 231 493 17 266 5.38e-35 138
Msa1025610 MtrunA17_Chr8g0350881 49.007 151 77 0 485 635 339 489 2.41e-39 151
Msa1025610 MtrunA17_Chr8g0350881 37.354 257 143 6 231 481 11 255 3.01e-36 142
Msa1025610 MtrunA17_Chr2g0294921 47.590 166 81 1 469 634 479 638 2.46e-39 153
Msa1025610 MtrunA17_Chr2g0294921 30.496 282 171 6 217 487 145 412 1.36e-31 130
Msa1025610 MtrunA17_Chr2g0294931 48.649 148 76 0 488 635 343 490 3.69e-39 150
Msa1025610 MtrunA17_Chr2g0294931 29.603 277 170 6 222 487 1 263 6.03e-31 127
Msa1025610 MtrunA17_Chr6g0463851 44.025 159 84 2 469 627 330 483 6.33e-39 150
Msa1025610 MtrunA17_Chr6g0463851 32.830 265 147 7 231 481 10 257 1.88e-30 125
Msa1025610 MtrunA17_Chr4g0066151 45.402 174 80 4 472 633 316 486 6.95e-39 150
Msa1025610 MtrunA17_Chr4g0066151 36.471 255 141 7 231 481 17 254 1.55e-37 146
Msa1025610 MtrunA17_Chr7g0265151 42.331 163 86 3 466 626 327 483 2.11e-38 148
Msa1025610 MtrunA17_Chr7g0265151 33.455 275 144 10 230 484 7 262 7.59e-32 129
Msa1025610 MtrunA17_Chr7g0265101 42.424 165 91 2 471 635 333 493 2.40e-38 148
Msa1025610 MtrunA17_Chr7g0265101 30.743 296 185 9 230 514 7 293 1.40e-29 123
Msa1025610 MtrunA17_Chr5g0410941 46.575 146 78 0 488 633 351 496 2.94e-38 148
Msa1025610 MtrunA17_Chr5g0410941 30.534 262 153 6 231 481 22 265 1.35e-27 117
Msa1025610 MtrunA17_Chr7g0265051 44.000 150 82 1 486 635 344 491 3.56e-38 148
Msa1025610 MtrunA17_Chr7g0265051 31.987 297 178 10 230 514 7 291 1.69e-28 119
Msa1025610 MtrunA17_Chr5g0419771 33.696 276 168 5 216 481 20 290 4.29e-38 148
Msa1025610 MtrunA17_Chr5g0419771 40.462 173 100 1 461 630 344 516 5.11e-37 145
Msa1025610 MtrunA17_Chr4g0066131 45.679 162 82 2 477 635 325 483 5.82e-38 147
Msa1025610 MtrunA17_Chr4g0066131 37.262 263 128 7 231 481 12 249 3.73e-37 145
Msa1025610 MtrunA17_Chr4g0066281 45.399 163 88 1 473 635 314 475 7.34e-38 146
Msa1025610 MtrunA17_Chr4g0066281 36.905 252 141 6 231 481 11 245 3.40e-37 145
Msa1025610 MtrunA17_Chr6g0463861 46.207 145 73 2 488 630 336 477 1.26e-37 146
Msa1025610 MtrunA17_Chr6g0463861 35.714 266 147 6 222 481 1 248 7.08e-33 132
Msa1025610 MtrunA17_Chr4g0014061 34.538 249 153 4 231 477 8 248 1.48e-37 146
Msa1025610 MtrunA17_Chr4g0014061 39.130 207 119 2 436 635 275 481 1.87e-37 145
Msa1025610 MtrunA17_Chr8g0374941 50.000 146 73 0 488 633 1279 1424 2.35e-37 149
Msa1025610 MtrunA17_Chr8g0374941 34.828 290 167 7 201 482 445 720 1.05e-36 147
Msa1025610 MtrunA17_Chr8g0374941 37.984 258 142 7 231 482 10 255 1.13e-35 144
Msa1025610 MtrunA17_Chr8g0374941 34.828 290 168 7 201 482 917 1193 1.73e-35 144
Msa1025610 MtrunA17_Chr8g0374941 48.800 125 64 0 488 612 341 465 3.22e-31 130
Msa1025610 MtrunA17_Chr8g0374941 50.413 121 60 0 488 608 806 926 1.45e-29 125
Msa1025610 MtrunA17_Chr7g0265111 42.938 177 90 4 467 636 353 525 7.30e-37 145
Msa1025610 MtrunA17_Chr7g0265111 33.582 268 167 7 227 487 34 297 1.12e-34 138
Msa1025610 MtrunA17_Chr7g0243721 66.327 98 33 0 404 501 1 98 3.74e-36 132
Msa1025610 MtrunA17_Chr5g0419761 33.582 268 160 6 231 485 8 270 4.72e-35 139
Msa1025610 MtrunA17_Chr5g0419761 42.857 168 85 4 469 631 332 493 7.80e-34 135
Msa1025610 MtrunA17_Chr7g0249931 24.948 477 253 16 227 626 35 483 2.08e-32 131
Msa1025610 MtrunA17_Chr2g0294941 47.581 124 65 0 488 611 241 364 3.10e-32 128
Msa1025610 MtrunA17_Chr3g0121991 25.255 491 257 13 232 631 79 550 7.92e-32 130
Msa1025610 MtrunA17_Chr8g0377921 44.526 137 68 2 488 624 333 461 4.59e-31 127
Msa1025610 MtrunA17_Chr1g0207881 26.303 422 243 16 231 627 7 385 3.55e-30 122
Msa1025610 MtrunA17_Chr7g0232391 43.182 132 65 2 488 619 337 458 5.94e-30 123
Msa1025610 MtrunA17_Chr5g0414331 26.543 486 243 19 221 626 2 453 1.19e-29 122
Msa1025610 MtrunA17_Chr3g0122001 39.053 169 83 3 469 626 793 952 2.66e-29 124
Msa1025610 MtrunA17_Chr3g0122001 36.047 172 91 3 469 629 313 476 9.77e-27 116
Msa1025610 MtrunA17_Chr6g0449931 43.836 146 72 2 484 629 335 470 6.49e-29 120
Msa1025610 MtrunA17_Chr8g0336691 42.177 147 75 2 484 630 780 916 6.96e-29 123
Msa1025610 MtrunA17_Chr8g0336691 41.096 146 76 2 484 629 1247 1382 1.26e-28 122
Msa1025610 MtrunA17_Chr8g0336691 38.776 147 80 2 484 630 341 477 4.88e-26 114
Msa1025610 MtrunA17_Chr8g0361411 45.270 148 68 2 483 630 323 457 1.16e-28 119
Msa1025610 MtrunA17_Chr7g0232411 39.437 142 76 2 488 629 337 468 1.43e-28 119
Msa1025610 MtrunA17_Chr5g0414321 25.605 496 243 20 222 631 1 456 1.56e-28 119
Msa1025610 MtrunA17_Chr7g0275511 41.176 136 70 2 484 619 343 468 2.24e-28 119
Msa1025610 MtrunA17_Chr7g0232401 40.741 162 83 4 470 628 318 469 2.34e-28 119
Msa1025610 MtrunA17_Chr8g0336651 42.466 146 74 2 484 629 1111 1246 3.71e-28 120
Msa1025610 MtrunA17_Chr8g0336651 41.259 143 74 2 488 630 646 778 6.15e-27 117
Msa1025610 MtrunA17_Chr8g0336651 38.849 139 75 2 484 622 332 460 3.12e-24 108
Msa1025610 MtrunA17_Chr8g0339451 41.727 139 71 2 484 622 331 459 3.97e-28 118
Msa1025610 MtrunA17_Chr6g0486251 43.939 132 65 2 488 619 335 457 5.22e-28 117
Msa1025610 MtrunA17_Chr6g0486201 43.939 132 65 2 488 619 335 457 5.22e-28 117
Msa1025610 MtrunA17_Chr6g0464921 35.323 201 113 6 428 626 270 455 7.26e-28 117
Msa1025610 MtrunA17_Chr6g0459311 33.493 209 129 3 412 619 265 464 9.66e-28 117
Msa1025610 MtrunA17_Chr1g0153461 40.141 142 75 2 488 629 84 215 1.03e-27 111
Msa1025610 MtrunA17_Chr8g0335161 40.789 152 79 3 470 619 317 459 1.44e-27 116
Msa1025610 MtrunA17_Chr8g0373301 40.741 162 81 4 470 628 319 468 1.58e-27 116
Msa1025610 MtrunA17_Chr6g0464881 35.122 205 117 8 430 631 268 459 3.03e-27 115
Msa1025610 MtrunA17_Chr8g0370941 41.727 139 71 2 483 619 351 481 3.25e-27 115
Msa1025610 MtrunA17_Chr8g0339441 41.727 139 71 2 484 622 297 425 3.42e-27 114
Msa1025610 MtrunA17_Chr6g0464861 35.294 204 106 7 431 626 268 453 3.59e-27 115
Msa1025610 MtrunA17_Chr6g0464861 26.250 240 140 10 222 447 1 217 1.95e-13 73.2
Msa1025610 MtrunA17_Chr7g0232311 40.000 140 74 2 484 623 331 460 3.99e-27 115
Msa1025610 MtrunA17_Chr5g0448521 34.969 163 102 2 462 624 307 465 6.90e-27 114
Msa1025610 MtrunA17_Chr1g0207971 34.146 164 97 3 469 632 307 459 1.05e-26 114
Msa1025610 MtrunA17_Chr8g0334851 40.397 151 80 3 484 634 337 477 1.41e-26 113
Msa1025610 MtrunA17_Chr5g0420801 24.380 484 261 18 227 629 2 461 1.50e-26 113
Msa1025610 MtrunA17_Chr7g0218841 24.790 476 230 16 232 623 6 437 1.65e-26 112
Msa1025610 MtrunA17_Chr6g0464841 38.365 159 86 4 469 626 307 454 1.66e-26 113
Msa1025610 MtrunA17_Chr1g0207931 23.077 546 310 21 133 627 12 498 1.76e-26 113
Msa1025610 MtrunA17_Chr8g0339601 40.741 135 70 2 488 622 202 326 1.97e-26 110
Msa1025610 MtrunA17_Chr6g0454271 39.716 141 70 3 486 626 161 286 2.47e-26 109
Msa1025610 MtrunA17_Chr8g0339631 38.764 178 96 5 460 635 311 477 2.67e-26 112
Msa1025610 MtrunA17_Chr5g0440421 36.667 150 86 2 477 626 349 489 2.89e-26 112
Msa1025610 MtrunA17_Chr5g0440421 26.772 254 162 8 232 466 10 258 2.24e-15 79.3
Msa1025610 MtrunA17_Chr8g0334861 38.710 155 84 4 470 623 316 460 4.67e-26 112
Msa1025610 MtrunA17_Chr1g0159551 34.715 193 99 6 449 626 279 459 5.13e-26 111
Msa1025610 MtrunA17_Chr8g0339461 37.671 146 81 2 484 629 339 474 5.56e-26 111
Msa1025610 MtrunA17_Chr8g0347281 40.288 139 73 2 484 622 340 468 6.32e-26 111
Msa1025610 MtrunA17_Chr8g0347271 40.288 139 73 2 484 622 341 469 7.05e-26 111
Msa1025610 MtrunA17_Chr8g0335141 33.182 220 135 4 412 629 262 471 9.19e-26 111
Msa1025610 MtrunA17_Chr8g0337381 40.714 140 69 3 491 629 2 128 1.26e-25 102
Msa1025610 MtrunA17_Chr1g0173121 37.888 161 82 4 474 626 312 462 1.36e-25 110
Msa1025610 MtrunA17_Chr6g0454351 39.716 141 70 3 486 626 339 464 1.83e-25 110
Msa1025610 MtrunA17_Chr1g0207981 28.700 223 124 8 411 626 278 472 2.27e-25 110
Msa1025610 MtrunA17_Chr6g0454171 37.589 141 73 3 486 626 184 309 2.66e-25 107
Msa1025610 MtrunA17_Chr7g0250001 32.075 212 118 7 431 634 262 455 2.90e-25 109
Msa1025610 MtrunA17_Chr7g0250001 27.686 242 119 13 229 447 3 211 9.66e-12 67.8
Msa1025610 MtrunA17_Chr6g0462551 39.716 141 75 2 484 624 332 462 3.15e-25 109
Msa1025610 MtrunA17_Chr5g0442521 40.602 133 75 2 492 624 345 473 3.39e-25 109
Msa1025610 MtrunA17_Chr6g0454221 39.286 140 70 3 486 625 105 229 3.48e-25 106
Msa1025610 MtrunA17_Chr6g0454371 36.879 141 74 3 486 626 45 170 3.65e-25 102
Msa1025610 MtrunA17_Chr6g0454151 36.806 144 77 2 483 626 348 477 4.50e-25 109
Msa1025610 MtrunA17_Chr3g0078841 39.007 141 71 3 486 626 352 477 5.39e-25 108
Msa1025610 MtrunA17_Chr3g0079711 35.795 176 88 5 449 621 33 186 5.44e-25 102
Msa1025610 MtrunA17_Chr1g0153451 36.986 146 82 2 484 629 331 466 5.88e-25 108
Msa1025610 MtrunA17_Chr6g0464871 35.443 158 92 2 469 626 319 466 6.39e-25 108
Msa1025610 MtrunA17_Chr8g0336331 38.889 144 74 2 483 626 347 476 7.63e-25 108
Msa1025610 MtrunA17_Chr8g0336731 35.526 152 88 2 484 635 358 499 8.57e-25 108
Msa1025610 MtrunA17_Chr7g0249961 34.171 199 115 7 431 626 74 259 1.01e-24 104
Msa1025610 MtrunA17_Chr8g0361371 36.709 158 87 4 467 619 314 463 1.70e-24 107
Msa1025610 MtrunA17_Chr8g0377941 39.568 139 76 2 488 626 331 461 2.01e-24 107
Msa1025610 MtrunA17_Chr6g0454201 39.007 141 71 3 486 626 355 480 2.16e-24 107
Msa1025610 MtrunA17_Chr6g0454301 39.007 141 71 3 486 626 605 730 2.62e-24 108
Msa1025610 MtrunA17_Chr6g0454301 38.571 140 71 3 486 625 104 228 5.41e-21 97.8
Msa1025610 MtrunA17_Chr6g0454331 39.007 141 71 3 486 626 353 478 3.08e-24 106
Msa1025610 MtrunA17_Chr7g0232341 34.146 164 96 4 470 631 318 471 3.12e-24 106
Msa1025610 MtrunA17_Chr6g0454361 37.589 141 73 3 486 626 355 480 3.34e-24 106
Msa1025610 MtrunA17_Chr2g0307961 41.844 141 68 3 487 626 341 468 3.36e-24 106
Msa1025610 MtrunA17_Chr7g0232331 38.298 141 76 3 470 609 318 448 3.57e-24 106
Msa1025610 MtrunA17_Chr8g0357361 45.455 121 64 2 450 568 144 264 3.61e-24 102
Msa1025610 MtrunA17_Chr2g0329111 40.310 129 67 3 485 612 340 459 4.86e-24 106
Msa1025610 MtrunA17_Chr3g0079731 37.143 140 79 3 484 623 347 477 5.22e-24 105
Msa1025610 MtrunA17_Chr6g0462521 40.845 142 71 4 484 622 318 449 5.77e-24 105
Msa1025610 MtrunA17_Chr6g0454291 39.716 141 70 3 486 626 351 476 6.24e-24 105
Msa1025610 MtrunA17_Chr8g0336741 38.129 139 76 2 484 622 339 467 6.32e-24 105
Msa1025610 MtrunA17_Chr3g0098111 30.481 187 113 4 449 628 295 471 9.30e-24 105
Msa1025610 MtrunA17_Chr5g0442541 40.602 133 75 2 492 624 335 463 9.65e-24 105
Msa1025610 MtrunA17_Chr5g0442561 37.594 133 79 2 492 624 342 470 9.68e-24 105
Msa1025610 MtrunA17_Chr2g0302991 38.356 146 81 2 481 626 326 462 1.03e-23 104
Msa1025610 MtrunA17_Chr3g0118751 24.301 465 256 17 232 626 6 444 1.09e-23 104
Msa1025610 MtrunA17_Chr6g0454141 36.301 146 77 4 482 626 349 479 1.56e-23 104
Msa1025610 MtrunA17_Chr1g0207951 32.778 180 106 5 449 626 942 1108 1.58e-23 106
Msa1025610 MtrunA17_Chr1g0207951 32.653 147 89 2 481 627 435 571 5.35e-21 98.2
Msa1025610 MtrunA17_Chr5g0442581 40.816 147 80 3 492 635 346 488 2.37e-23 104
Msa1025610 MtrunA17_Chr7g0218831 31.797 217 113 8 411 623 251 436 2.53e-23 103
Msa1025610 MtrunA17_Chr6g0454131 36.170 141 75 3 486 626 353 478 3.62e-23 103
Msa1025610 MtrunA17_Chr3g0118721 37.857 140 72 3 487 626 165 289 3.76e-23 100
Msa1025610 MtrunA17_Chr7g0217881 23.480 477 258 16 232 626 10 461 3.89e-23 103
Msa1025610 MtrunA17_Chr8g0365811 36.184 152 84 4 479 628 819 959 4.40e-23 104
Msa1025610 MtrunA17_Chr8g0365811 31.757 148 93 2 481 628 338 477 8.19e-17 84.7
Msa1025610 MtrunA17_Chr6g0462541 38.686 137 74 2 488 624 335 461 4.53e-23 103
Msa1025610 MtrunA17_Chr5g0393591 23.109 476 252 18 232 639 17 446 6.22e-23 102
Msa1025610 MtrunA17_Chr8g0355011 25.000 328 189 9 342 626 48 361 6.39e-23 100
Msa1025610 MtrunA17_Chr8g0334831 39.167 120 65 1 484 603 340 451 6.63e-23 102
Msa1025610 MtrunA17_Chr5g0442511 36.765 136 82 2 492 627 363 494 8.29e-23 102
Msa1025610 MtrunA17_Chr4g0053321 31.818 176 108 3 461 634 322 487 9.51e-23 102
Msa1025610 MtrunA17_Chr6g0462531 39.394 132 70 3 484 615 332 453 1.07e-22 101
Msa1025610 MtrunA17_Chr7g0218821 30.493 223 116 8 411 627 262 451 1.14e-22 101
Msa1025610 MtrunA17_Chr6g0454401 37.589 141 73 3 486 626 355 480 1.14e-22 102
Msa1025610 MtrunA17_Chr7g0249981 33.668 199 116 7 431 626 281 466 1.16e-22 102
Msa1025610 MtrunA17_Chr3g0112771 40.690 145 71 3 488 632 328 457 1.43e-22 101
Msa1025610 MtrunA17_Chr2g0302961 36.184 152 76 3 481 626 329 465 1.76e-22 101
Msa1025610 MtrunA17_Chr6g0454231 29.386 228 109 7 435 626 7 218 1.84e-22 101
Msa1025610 MtrunA17_Chr8g0382021 37.415 147 84 3 477 623 347 485 1.94e-22 101
Msa1025610 MtrunA17_Chr5g0442601 36.585 164 88 3 467 624 720 873 2.13e-22 102
Msa1025610 MtrunA17_Chr5g0442601 56.452 62 27 0 492 553 272 333 1.43e-13 74.3
Msa1025610 MtrunA17_Chr6g0454341 35.294 136 74 2 491 626 356 477 3.01e-22 100
Msa1025610 MtrunA17_Chr6g0454261 38.194 144 75 3 483 626 350 479 3.21e-22 100
Msa1025610 MtrunA17_Chr5g0403641 35.971 139 81 2 484 622 368 498 4.61e-22 100
Msa1025610 MtrunA17_Chr8g0359821 36.170 141 75 3 486 626 352 477 4.67e-22 100
Msa1025610 MtrunA17_Chr7g0241801 25.476 420 243 15 230 601 7 404 5.46e-22 99.4
Msa1025610 MtrunA17_Chr6g0453951 35.461 141 76 3 486 626 401 526 5.94e-22 100
Msa1025610 MtrunA17_Chr5g0442491 34.682 173 100 4 461 624 304 472 6.14e-22 99.8
Msa1025610 MtrunA17_Chr3g0118711 36.429 140 74 3 487 626 356 480 6.31e-22 99.8
Msa1025610 MtrunA17_Chr3g0118771 38.571 140 71 3 487 626 364 488 7.08e-22 99.4
Msa1025610 MtrunA17_Chr6g0454211 36.170 141 75 3 486 626 641 766 7.88e-22 100
Msa1025610 MtrunA17_Chr3g0118671 37.143 140 73 3 487 626 349 473 9.11e-22 99.0
Msa1025610 MtrunA17_Chr3g0118691 37.143 140 73 3 487 626 358 482 9.42e-22 99.0
Msa1025610 MtrunA17_Chr6g0454121 35.461 141 76 3 486 626 353 478 1.25e-21 98.6
Msa1025610 MtrunA17_Chr8g0380531 33.503 197 113 6 436 627 275 458 1.36e-21 98.2
Msa1025610 MtrunA17_Chr6g0452771 36.879 141 74 3 486 626 354 479 1.43e-21 98.6
Msa1025610 MtrunA17_Chr5g0432731 35.000 140 83 3 491 629 167 299 1.52e-21 95.5
Msa1025610 MtrunA17_Chr4g0053501 30.952 168 104 3 461 626 307 464 1.83e-21 98.2
Msa1025610 MtrunA17_Chr6g0462571 40.146 137 72 3 488 624 333 459 1.91e-21 98.2
Msa1025610 MtrunA17_Chr6g0454181 35.294 136 74 2 491 626 358 479 2.04e-21 97.8
Msa1025610 MtrunA17_Chr4g0050341 37.419 155 81 4 474 627 352 491 2.32e-21 97.8
Msa1025610 MtrunA17_Chr3g0118701 36.429 140 74 3 487 626 358 482 3.14e-21 97.4
Msa1025610 MtrunA17_Chr6g0454321 35.294 136 73 3 486 621 352 472 3.18e-21 98.2
Msa1025610 MtrunA17_Chr5g0423981 34.028 144 81 2 483 626 315 444 4.33e-21 96.7
Msa1025610 MtrunA17_Chr5g0431441 39.286 140 76 4 488 626 334 465 4.48e-21 96.7
Msa1025610 MtrunA17_Chr5g0409591 38.983 118 59 2 484 601 354 458 6.36e-21 96.7
Msa1025610 MtrunA17_Chr6g0454191 36.029 136 73 2 491 626 359 480 6.91e-21 96.3
Msa1025610 MtrunA17_Chr1g0207831 28.922 204 111 6 433 627 286 464 1.32e-20 95.5
Msa1025610 MtrunA17_Chr1g0161351 33.553 152 89 3 481 630 360 501 1.50e-20 95.5
Msa1025610 MtrunA17_Chr1g0207861 34.483 145 82 4 486 628 337 470 2.34e-20 94.7
Msa1025610 MtrunA17_Chr7g0218811 35.766 137 74 3 488 624 325 447 2.83e-20 94.4
Msa1025610 MtrunA17_Chr5g0401721 29.518 166 106 3 461 626 316 470 5.24e-20 93.6
Msa1025610 MtrunA17_Chr6g0453961 34.043 141 78 3 486 626 364 489 5.51e-20 93.6
Msa1025610 MtrunA17_Chr5g0412131 35.329 167 84 6 461 623 323 469 5.92e-20 93.6
Msa1025610 MtrunA17_Chr5g0412111 35.294 153 81 5 476 628 329 463 1.05e-19 92.4
Msa1025610 MtrunA17_Chr8g0369341 34.028 144 83 2 486 629 340 471 1.20e-19 92.4
Msa1025610 MtrunA17_Chr5g0412101 35.256 156 77 5 475 623 332 470 1.23e-19 92.4
Msa1025610 MtrunA17_Chr4g0072761 33.333 186 98 5 442 623 289 452 1.46e-19 92.0
Msa1025610 MtrunA17_Chr5g0431361 34.194 155 93 4 477 628 307 455 2.19e-19 91.7
Msa1025610 MtrunA17_Chr5g0429711 29.358 218 126 7 412 626 269 461 3.78e-19 90.9
Msa1025610 MtrunA17_Chr8g0336261 37.273 110 56 1 483 592 41 137 5.33e-19 84.0
Msa1025610 MtrunA17_Chr5g0429681 32.984 191 92 7 450 624 327 497 3.84e-18 87.8
Msa1025610 MtrunA17_Chr4g0072771 35.075 134 74 2 495 628 347 467 4.77e-18 87.4
Msa1025610 MtrunA17_Chr3g0106251 25.095 263 160 10 365 626 67 293 5.11e-18 85.5
Msa1025610 MtrunA17_Chr5g0431421 33.766 154 95 4 477 628 302 450 5.86e-18 87.0
Msa1025610 MtrunA17_Chr5g0431401 34.483 145 90 3 484 628 311 450 3.09e-17 84.7
Msa1025610 MtrunA17_Chr5g0431371 32.468 154 95 4 478 628 303 450 4.71e-17 84.3
Msa1025610 MtrunA17_Chr3g0106231 31.214 173 104 7 469 640 304 462 4.81e-17 84.3
Msa1025610 MtrunA17_Chr4g0032331 31.731 208 106 10 436 628 268 454 5.46e-17 84.0
Msa1025610 MtrunA17_Chr2g0278711 30.000 170 97 4 469 630 325 480 1.65e-16 82.8
Msa1025610 MtrunA17_Chr3g0112761 32.867 143 82 2 487 629 324 452 2.63e-16 82.0
Msa1025610 MtrunA17_Chr7g0218791 31.343 134 79 2 492 625 326 446 8.01e-16 80.5
Msa1025610 MtrunA17_Chr3g0118661 31.928 166 86 6 469 625 331 478 8.20e-16 80.5
Msa1025610 MtrunA17_Chr5g0426401 36.134 119 60 3 487 605 186 288 8.80e-16 79.0
Msa1025610 MtrunA17_Chr4g0042931 35.000 140 80 4 474 613 322 450 2.49e-15 79.0
Msa1025610 MtrunA17_Chr7g0241781 35.065 154 84 6 449 601 266 404 2.64e-15 78.6
Msa1025610 MtrunA17_Chr5g0426431 31.325 166 89 5 469 626 329 477 3.95e-15 78.6
Msa1025610 MtrunA17_Chr4g0066231 43.373 83 35 3 529 605 1 77 8.01e-15 70.1
Msa1025610 MtrunA17_Chr3g0092641 33.750 160 79 7 469 619 329 470 9.10e-15 77.4
Msa1025610 MtrunA17_Chr4g0042891 32.258 155 94 4 474 628 324 467 1.31e-14 76.6
Msa1025610 MtrunA17_Chr6g0482061 34.307 137 77 5 478 613 342 466 1.40e-13 73.6
Msa1025610 MtrunA17_Chr5g0448551 39.437 71 42 1 485 555 324 393 1.56e-11 67.0
Msa1025610 MtrunA17_Chr4g0069611 24.771 218 147 7 390 602 232 437 2.01e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025610 AT3G53160.1 32.225 481 244 10 227 626 3 482 9.03e-67 227
Msa1025610 AT4G34135.2 33.453 278 171 5 222 486 1 277 2.96e-45 164
Msa1025610 AT4G34135.1 33.453 278 171 5 222 486 1 277 4.34e-44 165
Msa1025610 AT4G34135.1 52.113 142 64 2 487 628 346 483 3.22e-32 130
Msa1025610 AT2G36770.1 33.557 298 184 4 223 514 5 294 4.35e-44 165
Msa1025610 AT2G36770.1 44.898 147 80 1 488 633 349 495 2.54e-38 149
Msa1025610 AT2G15480.1 40.000 230 109 6 408 630 277 484 5.67e-41 156
Msa1025610 AT2G15480.1 29.368 269 176 5 230 485 8 275 6.30e-37 144
Msa1025610 AT2G36780.1 33.209 268 172 3 220 481 2 268 6.68e-41 156
Msa1025610 AT2G36780.1 45.638 149 76 2 488 633 349 495 1.10e-37 147
Msa1025610 AT2G15490.1 51.701 147 65 2 484 630 344 484 7.31e-41 155
Msa1025610 AT2G15490.1 31.716 268 160 6 230 481 5 265 5.56e-37 144
Msa1025610 AT2G15490.3 51.701 147 65 2 484 630 341 481 8.45e-41 155
Msa1025610 AT2G15490.3 31.716 268 160 6 230 481 5 265 5.32e-37 144
Msa1025610 AT2G36800.1 50.694 144 67 2 487 626 347 490 1.46e-40 155
Msa1025610 AT2G36800.1 34.100 261 160 6 231 482 11 268 5.37e-40 153
Msa1025610 AT4G34131.1 32.246 276 174 5 224 488 2 275 1.99e-40 154
Msa1025610 AT4G34131.1 53.846 143 58 4 487 628 346 481 1.99e-38 149
Msa1025610 AT2G15480.2 40.426 235 111 7 408 630 277 494 2.32e-40 154
Msa1025610 AT2G15480.2 29.368 269 176 5 230 485 8 275 5.30e-37 145
Msa1025610 AT2G36790.1 46.939 147 77 1 487 632 347 493 5.07e-40 153
Msa1025610 AT2G36790.1 33.846 260 161 5 231 482 12 268 2.09e-39 152
Msa1025610 AT2G16890.2 28.067 481 251 16 224 626 4 467 6.61e-40 153
Msa1025610 AT1G10400.1 27.975 479 242 15 230 626 5 462 1.26e-39 152
Msa1025610 AT2G36750.1 40.000 175 97 3 466 634 319 491 1.04e-38 150
Msa1025610 AT2G36750.1 33.835 266 152 6 231 482 9 264 2.43e-38 149
Msa1025610 AT2G36760.1 31.599 269 177 4 220 482 2 269 2.72e-38 149
Msa1025610 AT2G36760.1 42.384 151 86 1 484 633 345 495 2.66e-37 145
Msa1025610 AT3G53150.1 31.837 245 159 4 230 467 20 263 6.99e-34 136
Msa1025610 AT3G53150.1 40.000 175 85 4 469 629 347 515 1.19e-30 126
Msa1025610 AT4G34138.1 46.711 152 71 3 484 634 344 486 8.66e-34 135
Msa1025610 AT4G34138.1 31.179 263 169 4 229 481 8 268 2.74e-33 134
Msa1025610 AT2G16890.3 27.586 435 222 14 224 581 4 422 1.22e-33 134
Msa1025610 AT4G01070.1 42.384 151 77 2 484 634 335 475 9.89e-30 123
Msa1025610 AT5G26310.1 43.125 160 75 5 484 639 334 481 4.81e-27 115
Msa1025610 AT2G31750.1 32.883 222 120 8 408 626 259 454 5.33e-27 115
Msa1025610 AT3G50740.1 44.056 143 70 4 488 629 343 476 7.84e-27 115
Msa1025610 AT2G31750.2 32.883 222 120 8 408 626 259 454 9.42e-27 114
Msa1025610 AT1G05675.1 35.023 217 114 8 408 623 259 449 1.07e-26 114
Msa1025610 AT5G66690.1 43.243 148 67 5 484 627 334 468 1.54e-26 114
Msa1025610 AT1G05680.1 34.101 217 116 7 408 623 259 449 3.09e-26 112
Msa1025610 AT2G15490.2 30.890 191 111 4 230 404 5 190 8.40e-26 107
Msa1025610 AT2G15490.2 40.909 88 46 2 543 630 189 270 6.31e-11 63.9
Msa1025610 AT4G14090.1 40.127 157 82 3 471 625 308 454 1.46e-25 110
Msa1025610 AT2G30140.1 23.391 466 260 15 229 623 9 448 1.78e-25 110
Msa1025610 AT5G05870.1 30.830 253 147 6 383 626 221 454 2.83e-25 110
Msa1025610 AT1G01420.1 41.176 136 69 3 484 619 335 459 2.99e-25 110
Msa1025610 AT5G14860.1 34.536 194 117 5 436 626 289 475 3.14e-25 110
Msa1025610 AT5G14860.1 28.358 268 161 10 222 466 1 260 1.26e-14 77.4
Msa1025610 AT1G01420.2 41.176 136 69 3 484 619 338 462 3.27e-25 110
Msa1025610 AT2G43840.2 33.831 201 118 6 428 627 261 447 4.36e-25 109
Msa1025610 AT2G43820.1 35.625 160 93 3 470 628 298 448 4.60e-25 108
Msa1025610 AT2G43840.1 34.000 200 117 6 429 627 262 447 5.33e-25 108
Msa1025610 AT2G30140.2 23.391 466 259 16 229 623 9 447 1.91e-24 107
Msa1025610 AT2G18560.1 33.544 158 92 4 470 622 223 372 1.97e-24 106
Msa1025610 AT1G07260.1 38.462 143 79 4 484 626 338 471 2.96e-24 107
Msa1025610 AT3G16520.3 35.000 140 78 2 484 623 330 456 3.80e-24 106
Msa1025610 AT1G07250.1 40.411 146 79 2 481 626 335 472 4.20e-24 106
Msa1025610 AT3G11340.1 24.788 472 247 18 233 629 9 447 5.77e-24 105
Msa1025610 AT2G18570.1 39.259 135 73 3 489 622 336 462 8.53e-24 105
Msa1025610 AT2G29740.1 39.726 146 80 3 481 626 337 474 1.10e-23 105
Msa1025610 AT1G06000.1 36.416 173 81 3 469 626 275 433 1.42e-23 104
Msa1025610 AT4G15550.1 41.481 135 72 3 491 625 345 472 2.23e-23 104
Msa1025610 AT4G15480.1 36.076 158 88 5 483 636 341 489 2.34e-23 104
Msa1025610 AT1G73880.1 36.047 172 91 4 469 633 314 473 4.13e-23 103
Msa1025610 AT5G12890.1 35.099 151 87 3 477 625 339 480 6.70e-23 103
Msa1025610 AT3G21790.1 38.519 135 80 1 492 626 347 478 9.48e-23 102
Msa1025610 AT1G22400.1 33.721 172 94 4 469 634 332 489 1.19e-22 102
Msa1025610 AT3G16520.1 35.938 128 69 2 484 611 330 444 1.77e-22 101
Msa1025610 AT3G16520.2 35.938 128 69 2 484 611 330 444 1.80e-22 101
Msa1025610 AT4G36770.1 40.323 124 59 3 489 612 337 445 3.20e-22 100
Msa1025610 AT3G46660.1 36.364 143 76 3 487 629 331 458 3.63e-22 100
Msa1025610 AT5G59590.1 28.458 253 147 8 385 626 220 449 5.03e-22 100
Msa1025610 AT1G01390.1 43.182 132 65 2 484 615 335 456 5.73e-22 100
Msa1025610 AT3G21750.1 33.708 178 99 4 461 626 298 468 5.75e-22 100
Msa1025610 AT2G31790.1 34.810 158 90 4 469 623 306 453 6.15e-22 99.8
Msa1025610 AT1G01390.2 43.182 132 65 2 484 615 352 473 6.30e-22 100
Msa1025610 AT3G21800.1 36.735 147 81 5 484 626 337 475 6.33e-22 100
Msa1025610 AT4G15260.1 33.742 163 92 5 475 626 197 354 6.87e-22 98.2
Msa1025610 AT2G29730.1 32.727 165 101 3 469 630 309 466 8.11e-22 99.4
Msa1025610 AT3G46670.1 36.111 144 77 3 486 629 323 451 8.12e-22 99.4
Msa1025610 AT2G30150.1 29.508 244 150 9 390 629 214 439 9.89e-22 99.0
Msa1025610 AT1G05560.2 40.441 136 70 3 491 626 377 501 1.10e-21 99.4
Msa1025610 AT2G29710.1 33.951 162 96 3 469 626 308 462 1.30e-21 99.0
Msa1025610 AT2G30150.2 29.508 244 150 9 390 629 230 455 1.52e-21 98.6
Msa1025610 AT1G22380.1 35.374 147 73 4 469 607 331 463 1.57e-21 99.0
Msa1025610 AT1G05560.1 40.441 136 70 3 491 626 327 451 1.62e-21 98.6
Msa1025610 AT2G36970.1 31.333 150 90 3 484 633 341 477 2.18e-21 98.6
Msa1025610 AT2G23260.1 33.750 160 95 4 469 626 303 453 2.60e-21 97.8
Msa1025610 AT1G07240.1 35.714 154 95 2 473 626 326 475 3.94e-21 97.4
Msa1025610 AT1G78270.1 36.552 145 69 4 487 626 354 480 6.71e-21 97.1
Msa1025610 AT1G22340.1 39.706 136 63 4 494 626 362 481 6.81e-21 96.7
Msa1025610 AT4G15490.1 33.333 147 89 3 488 634 337 474 1.43e-20 95.9
Msa1025610 AT1G05530.1 39.706 136 71 3 491 626 330 454 2.65e-20 94.7
Msa1025610 AT3G46680.1 36.691 139 73 3 486 624 324 447 3.18e-20 94.4
Msa1025610 AT5G59580.1 34.028 144 80 3 486 629 322 450 3.40e-20 94.4
Msa1025610 AT3G21760.1 31.429 175 99 5 468 626 311 480 3.41e-20 94.7
Msa1025610 AT2G23250.1 30.457 197 116 8 433 626 257 435 3.83e-20 94.0
Msa1025610 AT2G29750.1 37.415 147 81 4 481 626 337 473 5.26e-20 94.0
Msa1025610 AT3G46700.1 32.738 168 98 3 461 628 294 446 6.22e-20 93.6
Msa1025610 AT1G22360.1 35.374 147 76 3 469 610 328 460 7.06e-20 93.6
Msa1025610 AT4G15280.2 36.170 141 83 4 487 626 371 505 8.56e-20 93.6
Msa1025610 AT5G05860.1 31.795 195 113 5 430 619 261 440 8.65e-20 93.2
Msa1025610 AT4G15280.1 36.170 141 83 4 487 626 339 473 8.92e-20 93.2
Msa1025610 AT4G15500.1 33.793 145 83 4 488 630 333 466 1.08e-19 93.2
Msa1025610 AT1G24100.1 33.562 146 88 3 481 626 322 458 1.68e-19 92.4
Msa1025610 AT5G38040.1 26.012 346 208 13 291 626 142 449 2.38e-19 91.7
Msa1025610 AT3G46650.1 37.226 137 71 3 486 622 307 428 2.71e-19 91.3
Msa1025610 AT5G03490.1 31.138 167 94 4 468 629 315 465 3.68e-19 91.3
Msa1025610 AT3G21560.1 32.394 142 87 3 487 628 342 474 6.14e-19 90.9
Msa1025610 AT3G21780.1 34.247 146 85 4 484 626 331 468 5.92e-18 87.8
Msa1025610 AT3G46720.1 34.965 143 78 3 486 628 315 442 2.02e-17 85.9
Msa1025610 AT5G38010.1 28.862 246 143 9 391 626 230 453 2.11e-17 85.9
Msa1025610 AT3G46690.1 32.867 143 81 2 486 628 324 451 2.53e-17 85.5
Msa1025610 AT5G05900.1 33.577 137 76 3 488 624 324 445 2.68e-17 85.5
Msa1025610 AT1G51210.1 34.074 135 77 4 468 602 311 433 2.79e-17 85.1
Msa1025610 AT1G51210.1 25.410 244 163 12 232 468 20 251 5.15e-11 65.9
Msa1025610 AT3G02100.1 29.358 218 120 8 411 628 278 461 3.03e-17 85.5
Msa1025610 AT3G02100.1 25.442 283 174 13 232 493 13 279 3.31e-11 66.6
Msa1025610 AT1G22360.2 40.426 94 51 1 469 557 328 421 4.29e-17 85.1
Msa1025610 AT5G17050.1 29.932 147 90 2 480 626 323 456 9.46e-17 84.0
Msa1025610 AT1G22370.1 51.562 64 31 0 494 557 186 249 1.18e-16 81.6
Msa1025610 AT5G05880.1 30.612 147 88 2 483 629 319 451 1.40e-16 83.2
Msa1025610 AT1G22370.2 40.426 94 51 1 469 557 326 419 2.88e-16 82.4
Msa1025610 AT1G30530.1 29.082 196 115 4 433 626 277 450 1.79e-15 79.7
Msa1025610 AT5G17030.1 28.947 152 83 2 481 626 323 455 3.15e-15 79.0
Msa1025610 AT3G55700.1 27.376 263 142 10 385 629 222 453 4.36e-15 78.6
Msa1025610 AT5G17040.1 28.105 153 85 2 480 626 306 439 7.54e-15 77.8
Msa1025610 AT5G17040.2 28.105 153 85 2 480 626 204 337 7.54e-15 76.6
Msa1025610 AT2G28080.1 32.258 155 82 5 474 628 342 473 8.17e-15 77.8
Msa1025610 AT2G26480.1 33.333 132 73 3 488 619 322 438 1.36e-14 77.0
Msa1025610 AT2G16890.4 27.562 283 153 11 224 478 4 262 1.39e-14 75.5
Msa1025610 AT2G16890.1 27.562 283 153 11 224 478 4 262 1.39e-14 75.5
Msa1025610 AT5G05890.1 31.507 146 85 3 484 629 325 455 1.70e-14 76.6
Msa1025610 AT3G55710.1 33.099 142 79 3 492 632 334 460 2.05e-14 76.6
Msa1025610 AT5G49690.1 32.530 166 92 4 469 633 308 454 2.11e-14 76.6
Msa1025610 AT3G22250.1 44.737 76 38 2 487 559 341 415 6.92e-13 71.6

Find 119 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGACTTTGTTGGGCAATTA+AGG 0.159723 7_1:+56381815 Msa1025610:CDS
TTGTCTTCTGGTTCATAAAT+TGG 0.172910 7_1:-56383718 None:intergenic
TAAAGATTTAGAAGTATAAA+TGG 0.197801 7_1:-56381572 None:intergenic
CAACCACCCATCTGCATAAA+AGG 0.220307 7_1:+56381331 Msa1025610:CDS
TTCATAAATTGGTTCAAAAT+AGG 0.231897 7_1:-56383707 None:intergenic
GTCAATATTCCATTCATATA+TGG 0.253631 7_1:-56381680 None:intergenic
AGTTTCAGCTTGGGCTAAAA+AGG 0.270587 7_1:+56383840 Msa1025610:CDS
AGTGATAGTGATAATGAAAT+TGG 0.282862 7_1:+56381487 Msa1025610:CDS
ATAGACAATGACAACAATTT+AGG 0.293188 7_1:+56383071 Msa1025610:CDS
CTGCATAAAAGGATTTAAAA+TGG 0.293258 7_1:+56381342 Msa1025610:CDS
AAGTTACATGAAGTTGGTTA+TGG 0.327914 7_1:-56382923 None:intergenic
TTGTGTTAACTTGTGCCCTT+AGG 0.329137 7_1:-56383540 None:intergenic
GTGTAGAGGCGATGGTTAGA+AGG 0.330413 7_1:+56384145 Msa1025610:CDS
GGCACCACAGCTTCAGATAT+TGG 0.334165 7_1:+56383930 Msa1025610:CDS
GGTTACATTAACACCATGTT+TGG 0.347379 7_1:-56383006 None:intergenic
CAGATGGGTGGTTGAATTAT+AGG 0.349432 7_1:-56381322 None:intergenic
TGGAGCTTCCTGATTGGTTA+AGG 0.358240 7_1:+56383665 Msa1025610:CDS
TTAATAACTACAGACTTTGT+TGG 0.371180 7_1:+56381805 Msa1025610:CDS
ATGATGAAAAGAAGGGTGAT+AGG 0.380002 7_1:+56383863 Msa1025610:CDS
TTGGGCAATTAAGGGGTTGG+TGG 0.388857 7_1:+56381824 Msa1025610:CDS
TAATAACTACAGACTTTGTT+GGG 0.391005 7_1:+56381806 Msa1025610:CDS
AGGGGTTTATCATATGGAAC+TGG 0.391050 7_1:+56383908 Msa1025610:CDS
GTCACAATTCCACCTGTTGC+AGG 0.391898 7_1:-56383958 None:intergenic
AGTTACATGAAGTTGGTTAT+GGG 0.392694 7_1:-56382922 None:intergenic
AATCTTGCTGTGTCTATCAT+AGG 0.398579 7_1:-56382978 None:intergenic
AGACTTTGTTGGGCAATTAA+GGG 0.411543 7_1:+56381816 Msa1025610:CDS
AAAGATTTAGAAGTATAAAT+GGG 0.418832 7_1:-56381571 None:intergenic
GAAGAAAAGTTACATGAAGT+TGG 0.421968 7_1:-56382929 None:intergenic
TTTCAAACATGGCCGTCAAT+TGG 0.422517 7_1:-56381519 None:intergenic
CTCCTCTGGAGCTTCCTGAT+TGG 0.424526 7_1:+56383659 Msa1025610:CDS
GGAGCTTCCTGATTGGTTAA+GGG 0.426094 7_1:+56383666 Msa1025610:CDS
AACATCGGCCACGCGATCAT+TGG 0.439739 7_1:-56384027 None:intergenic
CTATAAGAGGCCTTCACCTC+AGG 0.454029 7_1:+56381606 Msa1025610:CDS
TGTGTTAACTTGTGCCCTTA+GGG 0.455243 7_1:-56383539 None:intergenic
TTGGAAAATCCATATATGAA+TGG 0.456994 7_1:+56381671 Msa1025610:CDS
TTTCTTCCATTTCCATCTCC+CGG 0.457352 7_1:+56382945 Msa1025610:CDS
GCAACAAGGGGTTTATCATA+TGG 0.462033 7_1:+56383902 Msa1025610:CDS
TGTAGAGGCGATGGTTAGAA+GGG 0.462962 7_1:+56384146 Msa1025610:CDS
GATCGCGTGGCCGATGTTTG+CGG 0.472860 7_1:+56384032 Msa1025610:CDS
ATATGGCCGGGAGATGGAAA+TGG 0.477586 7_1:-56382951 None:intergenic
ATATTGGATCACCCTGCAAC+AGG 0.478995 7_1:+56383946 Msa1025610:CDS
TACAATTGAGATGACTCCTC+TGG 0.479939 7_1:+56383645 Msa1025610:CDS
TGATGAAAAGAAGGGTGATA+GGG 0.484411 7_1:+56383864 Msa1025610:CDS
GGTGTTGAAAATCTCAAAGA+TGG 0.489386 7_1:+56383152 Msa1025610:CDS
TGTAGGACCAGTTTCAGCTT+GGG 0.490185 7_1:+56383831 Msa1025610:CDS
GTTTCTTAACATGTGCCCTA+AGG 0.490869 7_1:+56383524 Msa1025610:CDS
TATACTTCATGATAAAATGA+AGG 0.492042 7_1:-56383564 None:intergenic
TCTTGAAACAGAACCTCAAT+CGG 0.492439 7_1:-56383230 None:intergenic
GTGTAGGACCAGTTTCAGCT+TGG 0.496388 7_1:+56383830 Msa1025610:CDS
TTGTTGGGCAATTAAGGGGT+TGG 0.500213 7_1:+56381821 Msa1025610:CDS
TGTCTATCATAGGAATCATA+TGG 0.504696 7_1:-56382968 None:intergenic
TAGTATTTGTGTAGAGGCGA+TGG 0.504974 7_1:+56384137 Msa1025610:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_1:+56383119 Msa1025610:CDS
TGGGCAATTAAGGGGTTGGT+GGG 0.511177 7_1:+56381825 Msa1025610:CDS
GGAATCATATGGCCGGGAGA+TGG 0.512968 7_1:-56382957 None:intergenic
TCACTGATATGATGTATCCT+TGG 0.515837 7_1:+56383273 Msa1025610:CDS
GGTTCAAAATAGGCTGTGGC+AGG 0.518930 7_1:-56383697 None:intergenic
TTTCTTAACATGTGCCCTAA+GGG 0.521088 7_1:+56383525 Msa1025610:CDS
TTGAAGAAATCTAAAGAACT+TGG 0.522053 7_1:+56384330 Msa1025610:CDS
ATTCTCGAAAGCTTGAATGC+TGG 0.525561 7_1:+56384000 Msa1025610:CDS
GGAAGACCAACTTGAGCTGA+AGG 0.526822 7_1:-56383125 None:intergenic
GATGAAAAGAAGGGTGATAG+GGG 0.538718 7_1:+56383865 Msa1025610:CDS
ATATATGAATGGAATATTGA+CGG 0.539924 7_1:+56381682 Msa1025610:CDS
ATCATAGGAATCATATGGCC+GGG 0.542322 7_1:-56382963 None:intergenic
GTGCAAAAGAAAACAAGTCA+TGG 0.544183 7_1:+56384112 Msa1025610:CDS
GTTGGTGGGATCACTATCTC+CGG 0.545415 7_1:+56381839 Msa1025610:CDS
GACTTTGTTGGGCAATTAAG+GGG 0.547821 7_1:+56381817 Msa1025610:CDS
TCCTTGTTGTTTACAAACAG+TGG 0.549599 7_1:-56381758 None:intergenic
TATCATAGGAATCATATGGC+CGG 0.549945 7_1:-56382964 None:intergenic
GTAGCTGCTTCCACAGTCCA+AGG 0.552855 7_1:-56383290 None:intergenic
GCTCAAGTTGGTCTTCCAGA+TGG 0.555432 7_1:+56383131 Msa1025610:CDS
ATTGGAATGTGTAGTAATGA+TGG 0.560009 7_1:-56383027 None:intergenic
ATATCAGTGACTATACAATC+AGG 0.562860 7_1:-56383260 None:intergenic
AAAAGAAGATCCTGAGGTGA+AGG 0.563718 7_1:-56381616 None:intergenic
GGGATCAAATCTTGGAGTGT+AGG 0.565216 7_1:+56383814 Msa1025610:CDS
CACATGAAAGAAAGCAACAA+GGG 0.568227 7_1:+56383889 Msa1025610:CDS
GTGGAAGCAGCTACAAAACT+AGG 0.568792 7_1:+56383299 Msa1025610:CDS
TATGATGTATCCTTGGACTG+TGG 0.573588 7_1:+56383280 Msa1025610:CDS
TGGTAATATAGACCAATTGA+CGG 0.575119 7_1:+56381507 Msa1025610:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_1:-56383640 None:intergenic
GAATTGTGACTCACTGTGGT+TGG 0.576367 7_1:+56383971 Msa1025610:CDS
GATGCTTCGAGATCCGATTG+AGG 0.578714 7_1:+56383217 Msa1025610:CDS
AATTGGTTCAAAATAGGCTG+TGG 0.581638 7_1:-56383701 None:intergenic
ATACTTCATGATAAAATGAA+GGG 0.583439 7_1:-56383563 None:intergenic
TGCAAAAGAAAACAAGTCAT+GGG 0.584104 7_1:+56384113 Msa1025610:CDS
GACAAGAGAGCAAAGAAATG+AGG 0.586260 7_1:+56384208 Msa1025610:CDS
GAACCAGAAGACAAAAGCTA+TGG 0.589243 7_1:+56383727 Msa1025610:CDS
TAAAATTGCTCCGCAAACAT+CGG 0.591217 7_1:-56384042 None:intergenic
AGAAACTTAGTGAAACTACA+AGG 0.595555 7_1:+56383791 Msa1025610:CDS
TTGGTGGGATCACTATCTCC+GGG 0.598805 7_1:+56381840 Msa1025610:CDS
GAGATGGTAGAGTGCTTCTG+TGG 0.606554 7_1:-56382864 None:intergenic
TCACAATTCCACCTGTTGCA+GGG 0.613109 7_1:-56383957 None:intergenic
TTGGATCACCCTGCAACAGG+TGG 0.613341 7_1:+56383949 Msa1025610:CDS
ATGGGATAGTATTTGTGTAG+AGG 0.615093 7_1:+56384131 Msa1025610:CDS
CTCGAAGCATCGATATTCCA+CGG 0.620602 7_1:-56383205 None:intergenic
AACCAATCAGGAAGCTCCAG+AGG 0.621140 7_1:-56383661 None:intergenic
TGCAAAGAGGACTATAGAGG+AGG 0.626778 7_1:+56384257 Msa1025610:CDS
TGCTGCAAAGAGGACTATAG+AGG 0.629248 7_1:+56384254 Msa1025610:CDS
GCAAAGAGGACTATAGAGGA+GGG 0.632681 7_1:+56384258 Msa1025610:CDS
AAGAGAGCAAAGAAATGAGG+AGG 0.633498 7_1:+56384211 Msa1025610:CDS
TCCACTGTTTGTAAACAACA+AGG 0.637951 7_1:+56381757 Msa1025610:CDS
AGCTAGGTGATGCTGCAAAG+AGG 0.641545 7_1:+56384244 Msa1025610:CDS
TCAATTGTATGAGGAAAACA+AGG 0.644557 7_1:-56383631 None:intergenic
CTGGTTTGCCAATGATCGCG+TGG 0.647739 7_1:+56384019 Msa1025610:CDS
AAACTTAGTGAAACTACAAG+GGG 0.652968 7_1:+56383793 Msa1025610:CDS
GAAACTTAGTGAAACTACAA+GGG 0.653342 7_1:+56383792 Msa1025610:CDS
TCAGAAGCTAAATTATCATG+AGG 0.653805 7_1:-56383589 None:intergenic
GGGGTTTATCATATGGAACT+GGG 0.653814 7_1:+56383909 Msa1025610:CDS
GAAGACCAACTTGAGCTGAA+GGG 0.661451 7_1:-56383124 None:intergenic
AAGAGGACTATAGAGGAGGG+TGG 0.668200 7_1:+56384261 Msa1025610:CDS
ATTCTCAGTAAAATCAACCG+TGG 0.672451 7_1:+56383188 Msa1025610:CDS
GCAAGATTATTAGCCAAACA+TGG 0.681952 7_1:+56382993 Msa1025610:CDS
ACACATGAAAGAAAGCAACA+AGG 0.682623 7_1:+56383888 Msa1025610:CDS
TAGAAGGGAAGAGATTGCAA+AGG 0.689092 7_1:+56384161 Msa1025610:CDS
ACATGAAAGAAAGCAACAAG+GGG 0.690985 7_1:+56383890 Msa1025610:CDS
TGATCCAATATCTGAAGCTG+TGG 0.695076 7_1:-56383934 None:intergenic
AAAGTCTGTAGTTATTAACG+AGG 0.741989 7_1:-56381800 None:intergenic
GGTGGAATTGTGACTCACTG+TGG 0.760280 7_1:+56383967 Msa1025610:CDS
AACTTAGTGAAACTACAAGG+GGG 0.786008 7_1:+56383794 Msa1025610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr7_1:56381898-56381917 Msa1025610:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr7_1:56381899-56381918 Msa1025610:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr7_1:56381899-56381918 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr7_1:56381898-56381917 None:intergenic 0.0%
!!! AAAGATTTAGAAGTATAAAT+GGG - chr7_1:56381574-56381593 None:intergenic 15.0%
!!! TAAAGATTTAGAAGTATAAA+TGG - chr7_1:56381575-56381594 None:intergenic 15.0%
!! TAGAAAAATATTACTATAAG+AGG + chr7_1:56381593-56381612 Msa1025610:CDS 15.0%
!!! TTTTGTCAAAATTCTTATTT+TGG + chr7_1:56381652-56381671 Msa1025610:CDS 15.0%
!! ATATATGAATGGAATATTGA+CGG + chr7_1:56381682-56381701 Msa1025610:CDS 20.0%
!!! TATATATATATGGGTTTGTT+AGG + chr7_1:56381938-56381957 Msa1025610:intron 20.0%
!!! ACACATTCTAAAAAATAAGT+GGG + chr7_1:56382051-56382070 Msa1025610:intron 20.0%
!!! ACACATTCTAAAAAATAAGT+GGG - chr7_1:56382051-56382070 None:intergenic 20.0%
!! AAGTAGTTAAATATACCTTA+AGG + chr7_1:56382158-56382177 Msa1025610:intron 20.0%
!! CCTATTATAAAATAGTAATG+AGG - chr7_1:56382532-56382551 None:intergenic 20.0%
!!! CCTCATTACTATTTTATAAT+AGG + chr7_1:56382529-56382548 Msa1025610:intron 20.0%
!! ATTCAAAAGCAAAAGAAAAA+TGG - chr7_1:56382692-56382711 None:intergenic 20.0%
!!! GATTAATTGTTTTTCAAAGT+GGG - chr7_1:56382748-56382767 None:intergenic 20.0%
!!! AGATTAATTGTTTTTCAAAG+TGG - chr7_1:56382749-56382768 None:intergenic 20.0%
!!! TTGAAGAGTTGATATTTAAA+GGG - chr7_1:56382791-56382810 None:intergenic 20.0%
!!! TAACATTTCTCTAAAATGAA+AGG - chr7_1:56383372-56383391 None:intergenic 20.0%
!! ATACTTCATGATAAAATGAA+GGG - chr7_1:56383566-56383585 None:intergenic 20.0%
!! TATACTTCATGATAAAATGA+AGG - chr7_1:56383567-56383586 None:intergenic 20.0%
!!! TTCATAAATTGGTTCAAAAT+AGG - chr7_1:56383710-56383729 None:intergenic 20.0%
!! TTAAATCCTTTTATGCAGAT+GGG - chr7_1:56381340-56381359 None:intergenic 25.0%
!! TTTAAATCCTTTTATGCAGA+TGG - chr7_1:56381341-56381360 None:intergenic 25.0%
! CTGCATAAAAGGATTTAAAA+TGG + chr7_1:56381342-56381361 Msa1025610:CDS 25.0%
!! AGTGATAGTGATAATGAAAT+TGG + chr7_1:56381487-56381506 Msa1025610:CDS 25.0%
!! TATATCGTGATTTTCAAACA+TGG - chr7_1:56381533-56381552 None:intergenic 25.0%
! TTGGAAAATCCATATATGAA+TGG + chr7_1:56381671-56381690 Msa1025610:CDS 25.0%
! GTCAATATTCCATTCATATA+TGG - chr7_1:56381683-56381702 None:intergenic 25.0%
! TTAATAACTACAGACTTTGT+TGG + chr7_1:56381805-56381824 Msa1025610:CDS 25.0%
! TAATAACTACAGACTTTGTT+GGG + chr7_1:56381806-56381825 Msa1025610:CDS 25.0%
! ACACCTTAATAAAAACTAGT+GGG - chr7_1:56381969-56381988 None:intergenic 25.0%
!! TTTTAGCAACATTCATCTTA+AGG - chr7_1:56382030-56382049 None:intergenic 25.0%
!! CACACATTCTAAAAAATAAG+TGG + chr7_1:56382050-56382069 Msa1025610:intron 25.0%
!! CACACATTCTAAAAAATAAG+TGG - chr7_1:56382050-56382069 None:intergenic 25.0%
!! ATATATATATGGGATTTGCT+AGG - chr7_1:56382228-56382247 None:intergenic 25.0%
!!! TCACAATAATGTTTTTTGAG+AGG + chr7_1:56382451-56382470 Msa1025610:intron 25.0%
! CTTAATTACTTGAACAAATG+AGG + chr7_1:56382629-56382648 Msa1025610:intron 25.0%
!! CTTTTGAATACTACTACTAT+GGG + chr7_1:56382703-56382722 Msa1025610:intron 25.0%
!!! CTTGAAGAGTTGATATTTAA+AGG - chr7_1:56382792-56382811 None:intergenic 25.0%
!!! ATTGTCTATGTTTTTTTGGA+AGG - chr7_1:56383060-56383079 None:intergenic 25.0%
!!! TGTCATTGTCTATGTTTTTT+TGG - chr7_1:56383064-56383083 None:intergenic 25.0%
! ATAGACAATGACAACAATTT+AGG + chr7_1:56383071-56383090 Msa1025610:CDS 25.0%
!! CTGAATAAGATGAATTTTGA+TGG - chr7_1:56383102-56383121 None:intergenic 25.0%
!! TAGAAAACATTTCTCCTTTT+AGG + chr7_1:56383502-56383521 Msa1025610:intron 25.0%
! TAAAAAGGATGATGAAAAGA+AGG + chr7_1:56383855-56383874 Msa1025610:CDS 25.0%
! AAAAAGGATGATGAAAAGAA+GGG + chr7_1:56383856-56383875 Msa1025610:CDS 25.0%
! TTGAAGAAATCTAAAGAACT+TGG + chr7_1:56384330-56384349 Msa1025610:CDS 25.0%
TGGTAATATAGACCAATTGA+CGG + chr7_1:56381507-56381526 Msa1025610:CDS 30.0%
AAAGTCTGTAGTTATTAACG+AGG - chr7_1:56381803-56381822 None:intergenic 30.0%
!!! ACACCCACTAGTTTTTATTA+AGG + chr7_1:56381963-56381982 Msa1025610:intron 30.0%
CACACCTTAATAAAAACTAG+TGG - chr7_1:56381970-56381989 None:intergenic 30.0%
! AGCAGGAGTATAATTTAATG+AGG - chr7_1:56382339-56382358 None:intergenic 30.0%
TTTCCTCTAAGCTAAATTCT+TGG + chr7_1:56382362-56382381 Msa1025610:intron 30.0%
TTACTTGAACAAATGAGGAA+TGG + chr7_1:56382634-56382653 Msa1025610:intron 30.0%
! GCTTTTGAATACTACTACTA+TGG + chr7_1:56382702-56382721 Msa1025610:intron 30.0%
!! AGAGTTGATATTTAAAGGGA+AGG - chr7_1:56382787-56382806 None:intergenic 30.0%
!! GTTTTTCAAAGTAGTTTCTG+TGG - chr7_1:56382832-56382851 None:intergenic 30.0%
!!! TGCTTTTGAAATCTTTGAGA+TGG - chr7_1:56382883-56382902 None:intergenic 30.0%
! AGTTACATGAAGTTGGTTAT+GGG - chr7_1:56382925-56382944 None:intergenic 30.0%
! AAGTTACATGAAGTTGGTTA+TGG - chr7_1:56382926-56382945 None:intergenic 30.0%
GAAGAAAAGTTACATGAAGT+TGG - chr7_1:56382932-56382951 None:intergenic 30.0%
TGTCTATCATAGGAATCATA+TGG - chr7_1:56382971-56382990 None:intergenic 30.0%
ATTGGAATGTGTAGTAATGA+TGG - chr7_1:56383030-56383049 None:intergenic 30.0%
! GATTTTACTGAGAATTTCTG+AGG - chr7_1:56383183-56383202 None:intergenic 30.0%
ATATCAGTGACTATACAATC+AGG - chr7_1:56383263-56383282 None:intergenic 30.0%
TTCATTAACATGTGCCTTAA+GGG - chr7_1:56383402-56383421 None:intergenic 30.0%
ATTCATTAACATGTGCCTTA+AGG - chr7_1:56383403-56383422 None:intergenic 30.0%
CACATGTTAAGAAACCTAAA+AGG - chr7_1:56383519-56383538 None:intergenic 30.0%
TCAGAAGCTAAATTATCATG+AGG - chr7_1:56383592-56383611 None:intergenic 30.0%
TCAATTGTATGAGGAAAACA+AGG - chr7_1:56383634-56383653 None:intergenic 30.0%
!! TTGTCTTCTGGTTCATAAAT+TGG - chr7_1:56383721-56383740 None:intergenic 30.0%
AGAAACTTAGTGAAACTACA+AGG + chr7_1:56383791-56383810 Msa1025610:CDS 30.0%
GAAACTTAGTGAAACTACAA+GGG + chr7_1:56383792-56383811 Msa1025610:CDS 30.0%
AAACTTAGTGAAACTACAAG+GGG + chr7_1:56383793-56383812 Msa1025610:CDS 30.0%
!!! CTTGTTGATGTTTTGAAGAT+GGG + chr7_1:56384078-56384097 Msa1025610:CDS 30.0%
!!! TTGTTGATGTTTTGAAGATG+GGG + chr7_1:56384079-56384098 Msa1025610:CDS 30.0%
TGCAAAAGAAAACAAGTCAT+GGG + chr7_1:56384113-56384132 Msa1025610:CDS 30.0%
TCTTCAAAAAGAAGATCCTG+AGG - chr7_1:56381625-56381644 None:intergenic 35.0%
TCCACTGTTTGTAAACAACA+AGG + chr7_1:56381757-56381776 Msa1025610:CDS 35.0%
!! TCCTTGTTGTTTACAAACAG+TGG - chr7_1:56381761-56381780 None:intergenic 35.0%
AGACTTTGTTGGGCAATTAA+GGG + chr7_1:56381816-56381835 Msa1025610:CDS 35.0%
TGTATGTTAGCAACTCCTAT+AGG + chr7_1:56382074-56382093 Msa1025610:intron 35.0%
! TTTTAGCAAGCTACACCTTA+AGG - chr7_1:56382176-56382195 None:intergenic 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr7_1:56382203-56382222 None:intergenic 35.0%
! GACACTGTGATATGTTTTCA+CGG - chr7_1:56382390-56382409 None:intergenic 35.0%
TGTTCTAATGTGACAATCTC+TGG + chr7_1:56382486-56382505 Msa1025610:intron 35.0%
!! CTCTGGAACATATTTACACT+TGG + chr7_1:56382503-56382522 Msa1025610:intron 35.0%
TATCATAGGAATCATATGGC+CGG - chr7_1:56382967-56382986 None:intergenic 35.0%
! AATCTTGCTGTGTCTATCAT+AGG - chr7_1:56382981-56383000 None:intergenic 35.0%
GCAAGATTATTAGCCAAACA+TGG + chr7_1:56382993-56383012 Msa1025610:CDS 35.0%
GGTTACATTAACACCATGTT+TGG - chr7_1:56383009-56383028 None:intergenic 35.0%
!! TTTTTGGAAGGTTGAAGCAT+TGG - chr7_1:56383048-56383067 None:intergenic 35.0%
! TTGAGATTTTCAACACCATC+TGG - chr7_1:56383149-56383168 None:intergenic 35.0%
! GGTGTTGAAAATCTCAAAGA+TGG + chr7_1:56383152-56383171 Msa1025610:CDS 35.0%
ATTCTCAGTAAAATCAACCG+TGG + chr7_1:56383188-56383207 Msa1025610:CDS 35.0%
TCTTGAAACAGAACCTCAAT+CGG - chr7_1:56383233-56383252 None:intergenic 35.0%
TCACTGATATGATGTATCCT+TGG + chr7_1:56383273-56383292 Msa1025610:CDS 35.0%
CTACAAAACTAGGTATTCCA+AGG + chr7_1:56383309-56383328 Msa1025610:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG + chr7_1:56383385-56383404 Msa1025610:intron 35.0%
TTTCTTAACATGTGCCCTAA+GGG + chr7_1:56383525-56383544 Msa1025610:CDS 35.0%
! TTCTTTTCCCTTAACCAATC+AGG - chr7_1:56383676-56383695 None:intergenic 35.0%
! AATTGGTTCAAAATAGGCTG+TGG - chr7_1:56383704-56383723 None:intergenic 35.0%
AACTTAGTGAAACTACAAGG+GGG + chr7_1:56383794-56383813 Msa1025610:CDS 35.0%
ATGATGAAAAGAAGGGTGAT+AGG + chr7_1:56383863-56383882 Msa1025610:CDS 35.0%
TGATGAAAAGAAGGGTGATA+GGG + chr7_1:56383864-56383883 Msa1025610:CDS 35.0%
ACACATGAAAGAAAGCAACA+AGG + chr7_1:56383888-56383907 Msa1025610:CDS 35.0%
CACATGAAAGAAAGCAACAA+GGG + chr7_1:56383889-56383908 Msa1025610:CDS 35.0%
ACATGAAAGAAAGCAACAAG+GGG + chr7_1:56383890-56383909 Msa1025610:CDS 35.0%
TAAAATTGCTCCGCAAACAT+CGG - chr7_1:56384045-56384064 None:intergenic 35.0%
!!! GCTTGTTGATGTTTTGAAGA+TGG + chr7_1:56384077-56384096 Msa1025610:CDS 35.0%
!!! TGTTGATGTTTTGAAGATGG+GGG + chr7_1:56384080-56384099 Msa1025610:CDS 35.0%
! TGTTTTCTTTTGCACCAACT+CGG - chr7_1:56384107-56384126 None:intergenic 35.0%
GTGCAAAAGAAAACAAGTCA+TGG + chr7_1:56384112-56384131 Msa1025610:CDS 35.0%
ATGGGATAGTATTTGTGTAG+AGG + chr7_1:56384131-56384150 Msa1025610:CDS 35.0%
! AAAGGCTGTTGAGATTTTGA+TGG + chr7_1:56384179-56384198 Msa1025610:CDS 35.0%
!! AAGGCTGTTGAGATTTTGAT+GGG + chr7_1:56384180-56384199 Msa1025610:CDS 35.0%
CAGATGGGTGGTTGAATTAT+AGG - chr7_1:56381325-56381344 None:intergenic 40.0%
! AATCCTTTTATGCAGATGGG+TGG - chr7_1:56381337-56381356 None:intergenic 40.0%
TTTCAAACATGGCCGTCAAT+TGG - chr7_1:56381522-56381541 None:intergenic 40.0%
AAAAGAAGATCCTGAGGTGA+AGG - chr7_1:56381619-56381638 None:intergenic 40.0%
CAGACTTTGTTGGGCAATTA+AGG + chr7_1:56381815-56381834 Msa1025610:CDS 40.0%
GACTTTGTTGGGCAATTAAG+GGG + chr7_1:56381817-56381836 Msa1025610:CDS 40.0%
! AGCGAGAACTTCTTTTCTCT+TGG - chr7_1:56381869-56381888 None:intergenic 40.0%
AACTCCTATAGGCATTTGCT+AGG + chr7_1:56382085-56382104 Msa1025610:intron 40.0%
GTATCCTAGCAAATGCCTAT+AGG - chr7_1:56382092-56382111 None:intergenic 40.0%
TGCTCCCACATAAAAACTAG+TGG + chr7_1:56382196-56382215 Msa1025610:intron 40.0%
GCTCCCACATAAAAACTAGT+GGG + chr7_1:56382197-56382216 Msa1025610:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr7_1:56382204-56382223 None:intergenic 40.0%
TAGCTTAGAGGAAACTTAGC+AGG - chr7_1:56382356-56382375 None:intergenic 40.0%
! GAGCCAAGAATTTAGCTTAG+AGG - chr7_1:56382368-56382387 None:intergenic 40.0%
AGAAAAAAGAGGCAGCTGTT+CGG - chr7_1:56382576-56382595 None:intergenic 40.0%
!!! CTGCCTCTTTTTTCTTGACA+TGG + chr7_1:56382581-56382600 Msa1025610:intron 40.0%
CCTCCATGTCAAGAAAAAAG+AGG - chr7_1:56382587-56382606 None:intergenic 40.0%
!!! CCTCTTTTTTCTTGACATGG+AGG + chr7_1:56382584-56382603 Msa1025610:intron 40.0%
!!! CTTTTTTCTTGACATGGAGG+AGG + chr7_1:56382587-56382606 Msa1025610:intron 40.0%
! AGGAATGGAAGCATGTGTAT+TGG + chr7_1:56382649-56382668 Msa1025610:intron 40.0%
ACTACTACTATGGGATGAAG+AGG + chr7_1:56382712-56382731 Msa1025610:intron 40.0%
TAAAGGGAAGGTAGTTTCTG+TGG - chr7_1:56382775-56382794 None:intergenic 40.0%
TTTCTTCCATTTCCATCTCC+CGG + chr7_1:56382945-56382964 Msa1025610:CDS 40.0%
ATCATAGGAATCATATGGCC+GGG - chr7_1:56382966-56382985 None:intergenic 40.0%
TATGATGTATCCTTGGACTG+TGG + chr7_1:56383280-56383299 Msa1025610:CDS 40.0%
GAGCTGTAATAGTGAATCCT+TGG - chr7_1:56383329-56383348 None:intergenic 40.0%
GTTTCTTAACATGTGCCCTA+AGG + chr7_1:56383524-56383543 Msa1025610:CDS 40.0%
!! TGTGTTAACTTGTGCCCTTA+GGG - chr7_1:56383542-56383561 None:intergenic 40.0%
!! TTGTGTTAACTTGTGCCCTT+AGG - chr7_1:56383543-56383562 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_1:56383643-56383662 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_1:56383645-56383664 Msa1025610:CDS 40.0%
GAACCAGAAGACAAAAGCTA+TGG + chr7_1:56383727-56383746 Msa1025610:CDS 40.0%
!! TTTTTAGCCCAAGCTGAAAC+TGG - chr7_1:56383841-56383860 None:intergenic 40.0%
AGTTTCAGCTTGGGCTAAAA+AGG + chr7_1:56383840-56383859 Msa1025610:CDS 40.0%
GATGAAAAGAAGGGTGATAG+GGG + chr7_1:56383865-56383884 Msa1025610:CDS 40.0%
GCAACAAGGGGTTTATCATA+TGG + chr7_1:56383902-56383921 Msa1025610:CDS 40.0%
AGGGGTTTATCATATGGAAC+TGG + chr7_1:56383908-56383927 Msa1025610:CDS 40.0%
GGGGTTTATCATATGGAACT+GGG + chr7_1:56383909-56383928 Msa1025610:CDS 40.0%
! TGATCCAATATCTGAAGCTG+TGG - chr7_1:56383937-56383956 None:intergenic 40.0%
ATTCTCGAAAGCTTGAATGC+TGG + chr7_1:56384000-56384019 Msa1025610:CDS 40.0%
TAGTATTTGTGTAGAGGCGA+TGG + chr7_1:56384137-56384156 Msa1025610:CDS 40.0%
TAGAAGGGAAGAGATTGCAA+AGG + chr7_1:56384161-56384180 Msa1025610:CDS 40.0%
!! GTTGAGATTTTGATGGGAAG+TGG + chr7_1:56384186-56384205 Msa1025610:CDS 40.0%
GACAAGAGAGCAAAGAAATG+AGG + chr7_1:56384208-56384227 Msa1025610:CDS 40.0%
AAGAGAGCAAAGAAATGAGG+AGG + chr7_1:56384211-56384230 Msa1025610:CDS 40.0%
AGGAGGAAAGCTAAAAAGCT+AGG + chr7_1:56384228-56384247 Msa1025610:CDS 40.0%
CAACCACCCATCTGCATAAA+AGG + chr7_1:56381331-56381350 Msa1025610:CDS 45.0%
TTGTTGGGCAATTAAGGGGT+TGG + chr7_1:56381821-56381840 Msa1025610:CDS 45.0%
! CTTCTTTTCTCTTGGCTTCC+CGG - chr7_1:56381861-56381880 None:intergenic 45.0%
CTGTTCGGTCGGAAAATACT+TGG - chr7_1:56382561-56382580 None:intergenic 45.0%
ACTACTATGGGATGAAGAGG+TGG + chr7_1:56382715-56382734 Msa1025610:intron 45.0%
GAAGACCAACTTGAGCTGAA+GGG - chr7_1:56383127-56383146 None:intergenic 45.0%
!! CTCGAAGCATCGATATTCCA+CGG - chr7_1:56383208-56383227 None:intergenic 45.0%
GTGGAAGCAGCTACAAAACT+AGG + chr7_1:56383299-56383318 Msa1025610:CDS 45.0%
! TGGAGCTTCCTGATTGGTTA+AGG + chr7_1:56383665-56383684 Msa1025610:CDS 45.0%
! GGAGCTTCCTGATTGGTTAA+GGG + chr7_1:56383666-56383685 Msa1025610:CDS 45.0%
! GTGCCATAGCTTTTGTCTTC+TGG - chr7_1:56383733-56383752 None:intergenic 45.0%
CTACAAGGGGGATCAAATCT+TGG + chr7_1:56383806-56383825 Msa1025610:CDS 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_1:56383814-56383833 Msa1025610:CDS 45.0%
TGTAGGACCAGTTTCAGCTT+GGG + chr7_1:56383831-56383850 Msa1025610:CDS 45.0%
ATATTGGATCACCCTGCAAC+AGG + chr7_1:56383946-56383965 Msa1025610:CDS 45.0%
TCACAATTCCACCTGTTGCA+GGG - chr7_1:56383960-56383979 None:intergenic 45.0%
GAATTGTGACTCACTGTGGT+TGG + chr7_1:56383971-56383990 Msa1025610:CDS 45.0%
TGTAGAGGCGATGGTTAGAA+GGG + chr7_1:56384146-56384165 Msa1025610:CDS 45.0%
TGCTGCAAAGAGGACTATAG+AGG + chr7_1:56384254-56384273 Msa1025610:CDS 45.0%
TGCAAAGAGGACTATAGAGG+AGG + chr7_1:56384257-56384276 Msa1025610:CDS 45.0%
GCAAAGAGGACTATAGAGGA+GGG + chr7_1:56384258-56384277 Msa1025610:CDS 45.0%
CTATAAGAGGCCTTCACCTC+AGG + chr7_1:56381606-56381625 Msa1025610:CDS 50.0%
TTGGGCAATTAAGGGGTTGG+TGG + chr7_1:56381824-56381843 Msa1025610:CDS 50.0%
! TGGGCAATTAAGGGGTTGGT+GGG + chr7_1:56381825-56381844 Msa1025610:CDS 50.0%
! GTTGGTGGGATCACTATCTC+CGG + chr7_1:56381839-56381858 Msa1025610:CDS 50.0%
TTGGTGGGATCACTATCTCC+GGG + chr7_1:56381840-56381859 Msa1025610:CDS 50.0%
AAAAGAGGCAGCTGTTCGGT+CGG - chr7_1:56382572-56382591 None:intergenic 50.0%
! GAGATGGTAGAGTGCTTCTG+TGG - chr7_1:56382867-56382886 None:intergenic 50.0%
ATATGGCCGGGAGATGGAAA+TGG - chr7_1:56382954-56382973 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_1:56383119-56383138 Msa1025610:CDS 50.0%
GGAAGACCAACTTGAGCTGA+AGG - chr7_1:56383128-56383147 None:intergenic 50.0%
!! GCTCAAGTTGGTCTTCCAGA+TGG + chr7_1:56383131-56383150 Msa1025610:CDS 50.0%
GATGCTTCGAGATCCGATTG+AGG + chr7_1:56383217-56383236 Msa1025610:CDS 50.0%
AACCAATCAGGAAGCTCCAG+AGG - chr7_1:56383664-56383683 None:intergenic 50.0%
GGTTCAAAATAGGCTGTGGC+AGG - chr7_1:56383700-56383719 None:intergenic 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_1:56383830-56383849 Msa1025610:CDS 50.0%
GGCACCACAGCTTCAGATAT+TGG + chr7_1:56383930-56383949 Msa1025610:CDS 50.0%
GTCACAATTCCACCTGTTGC+AGG - chr7_1:56383961-56383980 None:intergenic 50.0%
GGTGGAATTGTGACTCACTG+TGG + chr7_1:56383967-56383986 Msa1025610:CDS 50.0%
GTGTAGAGGCGATGGTTAGA+AGG + chr7_1:56384145-56384164 Msa1025610:CDS 50.0%
AGCTAGGTGATGCTGCAAAG+AGG + chr7_1:56384244-56384263 Msa1025610:CDS 50.0%
AAGAGGACTATAGAGGAGGG+TGG + chr7_1:56384261-56384280 Msa1025610:CDS 50.0%
GGAATCATATGGCCGGGAGA+TGG - chr7_1:56382960-56382979 None:intergenic 55.0%
GTAGCTGCTTCCACAGTCCA+AGG - chr7_1:56383293-56383312 None:intergenic 55.0%
!! CTCCTCTGGAGCTTCCTGAT+TGG + chr7_1:56383659-56383678 Msa1025610:CDS 55.0%
TTGGATCACCCTGCAACAGG+TGG + chr7_1:56383949-56383968 Msa1025610:CDS 55.0%
! CTGGTTTGCCAATGATCGCG+TGG + chr7_1:56384019-56384038 Msa1025610:CDS 55.0%
AACATCGGCCACGCGATCAT+TGG - chr7_1:56384030-56384049 None:intergenic 55.0%
TTGAAGATGGGGGTCCGAGT+TGG + chr7_1:56384090-56384109 Msa1025610:CDS 55.0%
GATCGCGTGGCCGATGTTTG+CGG + chr7_1:56384032-56384051 Msa1025610:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 56381259 56384368 56381259 ID=Msa1025610;Name=Msa1025610
chr7_1 mRNA 56381259 56384368 56381259 ID=Msa1025610-mRNA-1;Parent=Msa1025610;Name=Msa1025610-mRNA-1;_AED=0.55;_eAED=0.55;_QI=0|0|0|0.66|1|1|3|0|640
chr7_1 exon 56381259 56381879 56381259 ID=Msa1025610-mRNA-1:exon:11285;Parent=Msa1025610-mRNA-1
chr7_1 exon 56382864 56383320 56382864 ID=Msa1025610-mRNA-1:exon:11286;Parent=Msa1025610-mRNA-1
chr7_1 exon 56383524 56384368 56383524 ID=Msa1025610-mRNA-1:exon:11287;Parent=Msa1025610-mRNA-1
chr7_1 CDS 56381259 56381879 56381259 ID=Msa1025610-mRNA-1:cds;Parent=Msa1025610-mRNA-1
chr7_1 CDS 56382864 56383320 56382864 ID=Msa1025610-mRNA-1:cds;Parent=Msa1025610-mRNA-1
chr7_1 CDS 56383524 56384368 56383524 ID=Msa1025610-mRNA-1:cds;Parent=Msa1025610-mRNA-1
Gene Sequence

>Msa1025610

ATGGTTGTGAAAAAATTAAATGAATCTGATTTTCAAAGCTCTTCTGCATCTATTAGTGATGCACCTATAATTCAACCACCCATCTGCATAAAAGGATTTAAAATGGAAACTGAAAAAGATGAATTTATCAATATACTAGATGAAAAATTAAAACAATTGCGTTTAAATGTTTTATCTCAAAAAGATACTTCAGAAATTTCTGATAGTTCTGAAGATAATACTAGTAATAGTGATAGTGATAATGAAATTGGTAATATAGACCAATTGACGGCCATGTTTGAAAATCACGATATAAATGAATCTGAAATCAATCCCATTTATACTTCTAAATCTTTAGAAAAATATTACTATAAGAGGCCTTCACCTCAGGATCTTCTTTTTGAAGAAAATGAATTTTGTCAAAATTCTTATTTTGGAAAATCCATATATGAATGGAATATTGACGGCTTAAATGAAAAGCAAATCATCATTGATATTATACATAGAGTGATTATGTATTCCACTGTTTGTAAACAACAAGGAAACTCTGATAGTTCTATAGCCTCGTTAATAACTACAGACTTTGTTGGGCAATTAAGGGGTTGGTGGGATCACTATCTCCGGGAAGCCAAGAGAAAAGAACCACAGAAGCACTCTACCATCTCAAAGATTTCAAAAGCAATAATGAAATCTCAACATTCCCATAACCAACTTCATGTAACTTTTCTTCCATTTCCATCTCCCGGCCATATGATTCCTATGATAGACACAGCAAGATTATTAGCCAAACATGGTGTTAATGTAACCATCATTACTACACATTCCAATGCTTCAACCTTCCAAAAAAACATAGACAATGACAACAATTTAGGATACTCCATCAAAATTCATCTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTTCCAGATGGTGTTGAAAATCTCAAAGATGGAACATCCTCAGAAATTCTCAGTAAAATCAACCGTGGAATATCGATGCTTCGAGATCCGATTGAGGTTCTGTTTCAAGAACTTCAACCTGATTGTATAGTCACTGATATGATGTATCCTTGGACTGTGGAAGCAGCTACAAAACTAGGTTTCTTAACATGTGCCCTAAGGGCACAAGTTAACACAACCCTTCATTTTATCATGAAGTATAGACCTCATGATAATTTAGCTTCTGATACACAGAAATTTACAATTCCTTGTTTTCCTCATACAATTGAGATGACTCCTCTGGAGCTTCCTGATTGGTTAAGGGAAAAGAATCCTGCCACAGCCTATTTTGAACCAATTTATGAACCAGAAGACAAAAGCTATGGCACACTATACAACAGTTTTCATGAACTAGAAAGTGATTATGAGAAACTTAGTGAAACTACAAGGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGGCTAAAAAGGATGATGAAAAGAAGGGTGATAGGGGACACATGAAAGAAAGCAACAAGGGGTTTATCATATGGAACTGGGCACCACAGCTTCAGATATTGGATCACCCTGCAACAGGTGGAATTGTGACTCACTGTGGTTGGAACTCGATTCTCGAAAGCTTGAATGCTGGTTTGCCAATGATCGCGTGGCCGATGTTTGCGGAGCAATTTTACAATGAGAAGTTGCTTGTTGATGTTTTGAAGATGGGGGTCCGAGTTGGTGCAAAAGAAAACAAGTCATGGGATAGTATTTGTGTAGAGGCGATGGTTAGAAGGGAAGAGATTGCAAAGGCTGTTGAGATTTTGATGGGAAGTGGACAAGAGAGCAAAGAAATGAGGAGGAAAGCTAAAAAGCTAGGTGATGCTGCAAAGAGGACTATAGAGGAGGGTGGACATTCTTACAACAACTTGATTCAGTTCATTGATGAGCTGAAATCATTGAAGAAATCTAAAGAACTTGGTGAGAAATCAGATTAG
Protein sequence

>Msa1025610

MVVKKLNESDFQSSSASISDAPIIQPPICIKGFKMETEKDEFINILDEKLKQLRLNVLSQKDTSEISDSSEDNTSNSDSDNEIGNIDQLTAMFENHDINESEINPIYTSKSLEKYYYKRPSPQDLLFEENEFCQNSYFGKSIYEWNIDGLNEKQIIIDIIHRVIMYSTVCKQQGNSDSSIASLITTDFVGQLRGWWDHYLREAKRKEPQKHSTISKISKAIMKSQHSHNQLHVTFLPFPSPGHMIPMIDTARLLAKHGVNVTIITTHSNASTFQKNIDNDNNLGYSIKIHLIQFPSAQVGLPDGVENLKDGTSSEILSKINRGISMLRDPIEVLFQELQPDCIVTDMMYPWTVEAATKLGFLTCALRAQVNTTLHFIMKYRPHDNLASDTQKFTIPCFPHTIEMTPLELPDWLREKNPATAYFEPIYEPEDKSYGTLYNSFHELESDYEKLSETTRGIKSWSVGPVSAWAKKDDEKKGDRGHMKESNKGFIIWNWAPQLQILDHPATGGIVTHCGWNSILESLNAGLPMIAWPMFAEQFYNEKLLVDVLKMGVRVGAKENKSWDSICVEAMVRREEIAKAVEILMGSGQESKEMRRKAKKLGDAAKRTIEEGGHSYNNLIQFIDELKSLKKSKELGEKSD*