AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207530 MtrunA17_Chr2g0306391 99.036 415 4 0 1 415 1 415 0.0 853
Msa0207530 MtrunA17_Chr4g0062811 78.922 408 79 5 12 415 10 414 0.0 652
Msa0207530 MtrunA17_Chr3g0132041 56.584 281 113 4 128 399 103 383 5.90e-107 320
Msa0207530 MtrunA17_Chr7g0235761 45.333 300 143 6 121 399 67 366 7.57e-84 261
Msa0207530 MtrunA17_Chr1g0208941 47.601 271 115 2 121 391 75 318 5.08e-83 259
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207530 AT1G08510.1 76.296 405 87 5 1 399 1 402 0.0 608
Msa0207530 AT3G25110.1 46.644 298 136 7 121 400 68 360 1.13e-89 276
Msa0207530 AT4G13050.1 44.482 299 141 5 123 399 69 364 3.31e-86 267

Find 140 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATTGTTGTTATATA+TGG 0.196107 2_1:-39500511 Msa0207530:three_prime_UTR
TCAAAATTGTTGATAGGTTT+TGG 0.207603 2_1:+39500837 None:intergenic
CACTCACATCGCTGGCTTGC+TGG 0.220561 2_1:-39504192 Msa0207530:five_prime_UTR
TGTCAAGATTTCCCCTGTTT+TGG 0.226691 2_1:+39502057 None:intergenic
TCGATTAGATCGTACGAAAT+AGG 0.231767 2_1:-39502977 Msa0207530:CDS
GAGTGCTCCACAGCCAATTT+TGG 0.252533 2_1:-39501051 Msa0207530:CDS
AACCGCAGTTCCGTTGATTT+TGG 0.259020 2_1:+39503234 None:intergenic
GAAAACAAGTAAGGCTTTAT+AGG 0.268157 2_1:+39500738 None:intergenic
TCCATCTTCCAATTCATATA+TGG 0.276238 2_1:-39500597 Msa0207530:three_prime_UTR
GTTAAGACTGCCGGGCTTCT+TGG 0.280843 2_1:-39502787 Msa0207530:CDS
AGCTCATGACTCTCCAAAAT+TGG 0.291578 2_1:+39501038 None:intergenic
ATAATGTTTGTTTGTGTGTT+AGG 0.297244 2_1:+39504168 None:intergenic
TTCAGGATGGTCTTGTGTTT+CGG 0.325349 2_1:-39503009 Msa0207530:CDS
ATGATGGTGCCGAGATTGTT+AGG 0.330723 2_1:-39500878 Msa0207530:CDS
ATCTCTCCTCTGACCTCTTC+CGG 0.338263 2_1:+39501662 None:intergenic
TGATAGTGAGTCAAACATTT+AGG 0.340023 2_1:+39500785 None:intergenic
CTGTTATCCTCGTCCACAAC+TGG 0.341684 2_1:+39501614 None:intergenic
TCATCAATCAGTTGCCTGAT+TGG 0.344132 2_1:-39503153 Msa0207530:CDS
CTTGTGCGGGATGCCAAAAC+AGG 0.344885 2_1:-39502070 Msa0207530:CDS
GACGTTAATGAATCATTTGC+AGG 0.353941 2_1:-39502930 Msa0207530:intron
TACCATAACCATATATGAAT+TGG 0.355189 2_1:+39500589 None:intergenic
TTCCAATTCATATATGGTTA+TGG 0.356436 2_1:-39500591 Msa0207530:three_prime_UTR
GAAGTACATTGGGTGGATTC+TGG 0.356450 2_1:-39501404 Msa0207530:CDS
AGAACATCAAAATTGTTGAT+AGG 0.357493 2_1:+39500831 None:intergenic
TGGTATAGGGAAAATTGTTC+AGG 0.362930 2_1:-39503026 Msa0207530:CDS
GATATGCTTGTTGACCCTTT+TGG 0.364899 2_1:-39503046 Msa0207530:CDS
GGGCTTCTTGGTGATGGCTT+TGG 0.374601 2_1:-39502775 Msa0207530:CDS
CTTCTCAGCAGCAAGGAAAA+TGG 0.375814 2_1:+39503105 None:intergenic
AAATCCAAGCAAAGCTCTAA+TGG 0.383578 2_1:-39503286 Msa0207530:CDS
AGCAGAACTAACTCCATGTT+TGG 0.390225 2_1:+39503324 None:intergenic
GATGAAGATGATGATGTAAC+AGG 0.397644 2_1:+39503367 None:intergenic
TATATGGTTATGGTACTGTT+AGG 0.400638 2_1:-39500581 Msa0207530:three_prime_UTR
GACACTTGGGTTTCTGCGGC+AGG 0.408861 2_1:-39502118 Msa0207530:CDS
ACTAACTAAACTTGATGATT+CGG 0.409649 2_1:-39501588 Msa0207530:CDS
AAAGGGTCAACAAGCATATC+AGG 0.416344 2_1:+39503049 None:intergenic
AACATCTAGATCATTCCATC+TGG 0.417317 2_1:+39501447 None:intergenic
GTTAATTCAACGGGTGAAAG+AGG 0.442886 2_1:-39500681 Msa0207530:three_prime_UTR
CAGTCCCTGACATCTGTCTC+TGG 0.445222 2_1:-39500963 Msa0207530:CDS
GCAAGAAGCATGCTCCAATC+AGG 0.445777 2_1:+39503139 None:intergenic
TAATGTTTGTTTGTGTGTTA+GGG 0.448038 2_1:+39504169 None:intergenic
CTAATATGTGTTAATTCAAC+GGG 0.450836 2_1:-39500690 Msa0207530:three_prime_UTR
TGAGCTGCATTCCATGACTT+TGG 0.456877 2_1:-39501021 Msa0207530:CDS
AAGAGAACTTTAAAAGCAGC+AGG 0.457388 2_1:-39504282 None:intergenic
AAGGAAACTATCTAAAATTC+CGG 0.457461 2_1:-39501681 Msa0207530:CDS
CAAGAGAATAGAGTTGAAAC+AGG 0.464573 2_1:+39504030 None:intergenic
CTTAATCATGTTAAGACTGC+CGG 0.467906 2_1:-39502796 Msa0207530:CDS
AGCAGTGGATGATGCTTGAT+TGG 0.473258 2_1:-39503084 Msa0207530:CDS
GTTAGTTCTGCTAACCTTGG+AGG 0.478639 2_1:-39503313 Msa0207530:CDS
GTGAGTGAGTGGCACAGAAT+TGG 0.479676 2_1:+39504208 None:intergenic
AAAATGGTATGCGTCGTGAT+TGG 0.485644 2_1:-39502093 Msa0207530:CDS
GAGATTGTTAGGGGTAGGAC+TGG 0.487479 2_1:-39500867 Msa0207530:CDS
TCTGTCTCTGGTGCTGACAT+TGG 0.489613 2_1:-39500951 Msa0207530:CDS
AACTGATTGATGAATGTCCT+TGG 0.491484 2_1:+39503163 None:intergenic
TATCAGCTGGAGGTGCAGAT+TGG 0.494151 2_1:-39500767 Msa0207530:three_prime_UTR
TGATGGTGCCGAGATTGTTA+GGG 0.496988 2_1:-39500877 Msa0207530:CDS
TTCTGATCCAGTTGTGGACG+AGG 0.498778 2_1:-39501621 Msa0207530:CDS
ACTGCCGGGCTTCTTGGTGA+TGG 0.499989 2_1:-39502781 Msa0207530:CDS
AAAGCCATCACCAAGAAGCC+CGG 0.500537 2_1:+39502777 None:intergenic
ACTATCTAAAATTCCGGAAG+AGG 0.500584 2_1:-39501675 Msa0207530:CDS
TGTTACTCGGATGCAGGTTG+TGG 0.502339 2_1:-39502713 Msa0207530:CDS
TATATAACGAAGTGGCTGGC+TGG 0.505440 2_1:-39504234 Msa0207530:five_prime_UTR
AACATTTAGGTGCTCTGTGA+TGG 0.506232 2_1:+39500798 None:intergenic
ACCATATATGAATTGGAAGA+TGG 0.507891 2_1:+39500596 None:intergenic
GTTAATAATGTGAAGTACAT+TGG 0.509594 2_1:-39501415 Msa0207530:CDS
TCAACGGGTGAAAGAGGGAT+AGG 0.509607 2_1:-39500675 Msa0207530:three_prime_UTR
GAGCAGAGGAAGAATAGAGT+AGG 0.510390 2_1:+39500618 None:intergenic
ATGTTTGACTCACTATCAGC+TGG 0.510915 2_1:-39500780 Msa0207530:three_prime_UTR
ATTCCATGACTTTGGAGTAC+AGG 0.511740 2_1:-39501013 Msa0207530:CDS
CACTTGCTTCGACTCGATGA+TGG 0.516598 2_1:-39500894 Msa0207530:CDS
ACTTGATATGGGTTGTTACT+CGG 0.517014 2_1:-39502726 Msa0207530:CDS
AGAACTAACTCCATGTTTGG+AGG 0.519503 2_1:+39503327 None:intergenic
GTGCCACTCACTCACATCGC+TGG 0.520638 2_1:-39504200 Msa0207530:five_prime_UTR
AGATCTCATGAAAACAAGTA+AGG 0.521133 2_1:+39500729 None:intergenic
ACTAATATGTGTTAATTCAA+CGG 0.521513 2_1:-39500691 Msa0207530:three_prime_UTR
TCGGCTGAATATATTCGCAC+TGG 0.521996 2_1:-39501569 Msa0207530:CDS
TAAGCCATTAGAGCTTTGCT+TGG 0.523646 2_1:+39503282 None:intergenic
TTAATAATGTGAAGTACATT+GGG 0.528885 2_1:-39501414 Msa0207530:CDS
TATATATATAACGAAGTGGC+TGG 0.531033 2_1:-39504238 Msa0207530:five_prime_UTR
TTAATCATGTTAAGACTGCC+GGG 0.532564 2_1:-39502795 Msa0207530:CDS
TCATCTTCATCTGACAGTGT+TGG 0.533513 2_1:-39503355 Msa0207530:CDS
TGACTCTCCAAAATTGGCTG+TGG 0.535831 2_1:+39501044 None:intergenic
CAGCACCAGAGACAGATGTC+AGG 0.537306 2_1:+39500958 None:intergenic
GTCCTTGGGTGATGTTGTGA+TGG 0.537958 2_1:+39503178 None:intergenic
ATGGGTTGTTACTCGGATGC+AGG 0.539000 2_1:-39502719 Msa0207530:CDS
TCCTTGCTGCTGAGAAGCAG+TGG 0.539829 2_1:-39503099 Msa0207530:CDS
AGATTGTTAGGGGTAGGACT+GGG 0.539935 2_1:-39500866 Msa0207530:CDS
GGAGTTAGTTCTGCTAACCT+TGG 0.540076 2_1:-39503316 Msa0207530:CDS
GAGAACTTTAAAAGCAGCAG+GGG 0.541825 2_1:-39504280 None:intergenic
TGAATTGGAAGATGGAGCAG+AGG 0.546647 2_1:+39500604 None:intergenic
AAGTTGTTCAAGTAGACACT+TGG 0.551856 2_1:-39502132 Msa0207530:CDS
GCGTCGTGATTGGCTTGTGC+GGG 0.553139 2_1:-39502083 Msa0207530:CDS
TTGTTAGGGGTAGGACTGGG+TGG 0.554507 2_1:-39500863 Msa0207530:CDS
TTGGAAATTTAGCTGACAGC+GGG 0.555268 2_1:-39500932 Msa0207530:CDS
TGAAGAGAAGAGAAGAGAAG+AGG 0.555485 2_1:+39504139 None:intergenic
TTGTGCGGGATGCCAAAACA+GGG 0.559601 2_1:-39502069 Msa0207530:CDS
GCTTGGATTTGAATCCTCCA+AGG 0.561042 2_1:+39503299 None:intergenic
ACTGATTGATGAATGTCCTT+GGG 0.565331 2_1:+39503164 None:intergenic
TGTTAATTCTGATCCAGTTG+TGG 0.567572 2_1:-39501627 Msa0207530:CDS
TTAATTCAACGGGTGAAAGA+GGG 0.576794 2_1:-39500680 Msa0207530:three_prime_UTR
AGTCCTACCCCTAACAATCT+CGG 0.577020 2_1:+39500869 None:intergenic
AGTACAGGAGGGAATGTGGC+AGG 0.577889 2_1:-39500998 Msa0207530:CDS
TGCGTCGTGATTGGCTTGTG+CGG 0.578969 2_1:-39502084 Msa0207530:CDS
TTAGGGGTAGGACTGGGTGG+AGG 0.580415 2_1:-39500860 Msa0207530:CDS
ATAATGTGAAGTACATTGGG+TGG 0.582097 2_1:-39501411 Msa0207530:CDS
ACAAGCATATCAGGTCGTCT+AGG 0.587704 2_1:+39503058 None:intergenic
AAATCTTGACAAGAGCATCC+AGG 0.590317 2_1:-39502045 Msa0207530:intron
ACATCTAGATCATTCCATCT+GGG 0.591455 2_1:+39501448 None:intergenic
CCATGACTTTGGAGTACAGG+AGG 0.592758 2_1:-39501010 Msa0207530:CDS
TCCACTGCTTCTCAGCAGCA+AGG 0.592772 2_1:+39503098 None:intergenic
CCTCCTGTACTCCAAAGTCA+TGG 0.597089 2_1:+39501010 None:intergenic
GGTTACAACTACGACGGTGA+AGG 0.598952 2_1:-39503215 Msa0207530:CDS
CGTTATATATATAATCCACC+TGG 0.600787 2_1:+39504248 None:intergenic
CAACGGGTGAAAGAGGGATA+GGG 0.600933 2_1:-39500674 Msa0207530:three_prime_UTR
GTTGGAAAATCCTCCAAACA+TGG 0.605432 2_1:-39503337 Msa0207530:CDS
AGTTGTTCAAGTAGACACTT+GGG 0.611713 2_1:-39502131 Msa0207530:CDS
TTGGAGTACAGGAGGGAATG+TGG 0.613380 2_1:-39501002 Msa0207530:CDS
AGAGAACTTTAAAAGCAGCA+GGG 0.621042 2_1:-39504281 None:intergenic
AGCACCAGAGACAGATGTCA+GGG 0.622472 2_1:+39500959 None:intergenic
CACCATCACAACATCACCCA+AGG 0.625250 2_1:-39503180 Msa0207530:CDS
AGTAGACACTTGGGTTTCTG+CGG 0.630478 2_1:-39502122 Msa0207530:CDS
CATGACTTTGGAGTACAGGA+GGG 0.633124 2_1:-39501009 Msa0207530:CDS
GATGGTGCCGAGATTGTTAG+GGG 0.638472 2_1:-39500876 Msa0207530:CDS
GTGCCGAGATTGTTAGGGGT+AGG 0.642317 2_1:-39500872 Msa0207530:CDS
AAGCCAGCGATGTGAGTGAG+TGG 0.643224 2_1:+39504197 None:intergenic
TGGTTGATCGTTATCCGACG+TGG 0.644890 2_1:-39502693 Msa0207530:intron
GCAGCACCTTCCAAAATCAA+CGG 0.646470 2_1:-39503244 Msa0207530:CDS
ATAGGGAAAATTGTTCAGGA+TGG 0.648420 2_1:-39503022 Msa0207530:CDS
TCATGATGAATAAACTGACA+AGG 0.652704 2_1:-39501700 Msa0207530:CDS
AAAATTCCGGAAGAGGTCAG+AGG 0.654352 2_1:-39501668 Msa0207530:CDS
CTCAGCAGCAAGGAAAATGG+TGG 0.660147 2_1:+39503108 None:intergenic
GGATTATATATATAACGAAG+TGG 0.664627 2_1:-39504242 Msa0207530:five_prime_UTR
ATTGGAAATTTAGCTGACAG+CGG 0.670615 2_1:-39500933 Msa0207530:CDS
GTACATTGGGTGGATTCTGG+AGG 0.672791 2_1:-39501401 Msa0207530:intron
TTCCAAAATCAACGGAACTG+CGG 0.674773 2_1:-39503236 Msa0207530:CDS
TTTGACTCACTATCAGCTGG+AGG 0.685307 2_1:-39500777 Msa0207530:three_prime_UTR
AACTGCGGTTACAACTACGA+CGG 0.716495 2_1:-39503221 Msa0207530:CDS
TAGATCGTACGAAATAGGTG+CGG 0.735860 2_1:-39502972 Msa0207530:CDS
AGAACTTTAAAAGCAGCAGG+GGG 0.739894 2_1:-39504279 None:intergenic
TGTGCGGGATGCCAAAACAG+GGG 0.744085 2_1:-39502068 Msa0207530:CDS
AAGGTTAAGACTAACCACGT+CGG 0.758321 2_1:+39502679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAACAAAAAAAAAA+AGG + chr2_1:39500927-39500946 None:intergenic 10.0%
!!! TTTTTTGTAATTTTCTTTTT+GGG + chr2_1:39501078-39501097 None:intergenic 10.0%
!!! ATTTTTTGTAATTTTCTTTT+TGG + chr2_1:39501079-39501098 None:intergenic 10.0%
!!! ATTATCAATTTTTGTAAAAT+AGG + chr2_1:39502888-39502907 None:intergenic 10.0%
!!! ATTTAATTTTTTCTTCAAAA+TGG - chr2_1:39504206-39504225 Msa0207530:five_prime_UTR 10.0%
!!! TATTAAATTGTTGTTATATA+TGG - chr2_1:39504240-39504259 Msa0207530:five_prime_UTR 10.0%
!!! TATTGTTATTGTTTTTTTTC+TGG - chr2_1:39501190-39501209 Msa0207530:intron 15.0%
!!! TAATTATTTGTTTTGATAAC+AGG - chr2_1:39501924-39501943 Msa0207530:intron 15.0%
!!! TACAAACTTTTTATAAAAGT+AGG + chr2_1:39502408-39502427 None:intergenic 15.0%
!! ACTAAACAAATAATCAAAAA+GGG + chr2_1:39503628-39503647 None:intergenic 15.0%
!!! GAGATTTTGAATTTTGAATA+TGG + chr2_1:39500654-39500673 None:intergenic 20.0%
!!! AATTTTTTTCTTTCTGTTTG+TGG - chr2_1:39500847-39500866 Msa0207530:CDS 20.0%
!! TTAAGTGATTATACAAAGTT+AGG + chr2_1:39501117-39501136 None:intergenic 20.0%
!! TGTATAATCACTTAAATTCA+AGG - chr2_1:39501122-39501141 Msa0207530:intron 20.0%
!!! TTGTTTTGTAGATGTTATTA+TGG - chr2_1:39501273-39501292 Msa0207530:intron 20.0%
!!! TTTATGTAACAAATTTGTTG+TGG - chr2_1:39501877-39501896 Msa0207530:intron 20.0%
!!! TTATGTAACAAATTTGTTGT+GGG - chr2_1:39501878-39501897 Msa0207530:intron 20.0%
!!! AGCTTTATACATATGAATTT+TGG - chr2_1:39502314-39502333 Msa0207530:intron 20.0%
!!! GCTTTATACATATGAATTTT+GGG - chr2_1:39502315-39502334 Msa0207530:intron 20.0%
!!! TATGCTTGAAATTATGTTTT+TGG - chr2_1:39502540-39502559 Msa0207530:intron 20.0%
!!! AACATTTTCAACATATCTTA+TGG + chr2_1:39502774-39502793 None:intergenic 20.0%
!! TTAATAATGTGAAGTACATT+GGG - chr2_1:39503337-39503356 Msa0207530:CDS 20.0%
!! ATCTTTGATAAACAAATCAA+TGG - chr2_1:39503494-39503513 Msa0207530:intron 20.0%
!! GACTAAACAAATAATCAAAA+AGG + chr2_1:39503629-39503648 None:intergenic 20.0%
!! TGTTTAGTCAATAAACTTAT+CGG - chr2_1:39503640-39503659 Msa0207530:intron 20.0%
!! ACTAATATGTGTTAATTCAA+CGG - chr2_1:39504060-39504079 Msa0207530:five_prime_UTR 20.0%
!! ACTTTCATTGGAAAAAAATA+AGG + chr2_1:39504271-39504290 None:intergenic 20.0%
! GGATTATATATATAACGAAG+TGG - chr2_1:39500509-39500528 Msa0207530:three_prime_UTR 25.0%
! TAATGTTTGTTTGTGTGTTA+GGG + chr2_1:39500585-39500604 None:intergenic 25.0%
! ATAATGTTTGTTTGTGTGTT+AGG + chr2_1:39500586-39500605 None:intergenic 25.0%
!! TCATTTTCTCTCATTCTTTA+AGG - chr2_1:39500746-39500765 Msa0207530:three_prime_UTR 25.0%
! ATAATCACTTAAATTCAAGG+TGG - chr2_1:39501125-39501144 Msa0207530:intron 25.0%
! ACAACAACAAAACAACAATT+TGG + chr2_1:39501216-39501235 None:intergenic 25.0%
! GCACATTTAACAAATCAAAA+AGG + chr2_1:39502094-39502113 None:intergenic 25.0%
! ATTTAACCTAATCTTCAATC+TGG + chr2_1:39502261-39502280 None:intergenic 25.0%
! AAGATTAGGTTAAATTCTTC+TGG - chr2_1:39502266-39502285 Msa0207530:intron 25.0%
! AGATTAGGTTAAATTCTTCT+GGG - chr2_1:39502267-39502286 Msa0207530:intron 25.0%
! ACAGGGTATGAAATATAAAA+TGG - chr2_1:39502361-39502380 Msa0207530:intron 25.0%
!! TTTTACCATAATATGTAGCT+AGG + chr2_1:39502446-39502465 None:intergenic 25.0%
!!! TTTTGCAATTTCTGATTTGT+TGG - chr2_1:39502998-39503017 Msa0207530:CDS 25.0%
!! TTTTGATGTTTTACAGTGTT+TGG - chr2_1:39503027-39503046 Msa0207530:CDS 25.0%
!! TTTGATGTTTTACAGTGTTT+GGG - chr2_1:39503028-39503047 Msa0207530:CDS 25.0%
!! AAGGAAACTATCTAAAATTC+CGG - chr2_1:39503070-39503089 Msa0207530:CDS 25.0%
!! ACTAACTAAACTTGATGATT+CGG - chr2_1:39503163-39503182 Msa0207530:CDS 25.0%
! GTTAATAATGTGAAGTACAT+TGG - chr2_1:39503336-39503355 Msa0207530:CDS 25.0%
! ATATCAACAGTAGAATGAAT+TGG - chr2_1:39503581-39503600 Msa0207530:intron 25.0%
! GTTTAGTCAATAAACTTATC+GGG - chr2_1:39503641-39503660 Msa0207530:intron 25.0%
!!! TCAAAATTGTTGATAGGTTT+TGG + chr2_1:39503917-39503936 None:intergenic 25.0%
! AGAACATCAAAATTGTTGAT+AGG + chr2_1:39503923-39503942 None:intergenic 25.0%
! CTAATATGTGTTAATTCAAC+GGG - chr2_1:39504061-39504080 Msa0207530:five_prime_UTR 25.0%
! TTCCAATTCATATATGGTTA+TGG - chr2_1:39504160-39504179 Msa0207530:five_prime_UTR 25.0%
! TACCATAACCATATATGAAT+TGG + chr2_1:39504165-39504184 None:intergenic 25.0%
CGTTATATATATAATCCACC+TGG + chr2_1:39500506-39500525 None:intergenic 30.0%
TATATATATAACGAAGTGGC+TGG - chr2_1:39500513-39500532 Msa0207530:three_prime_UTR 30.0%
! CAAACATATTCCACACTTTT+TGG - chr2_1:39500673-39500692 Msa0207530:three_prime_UTR 30.0%
GAATTAGAATCCAAAAAGTG+TGG + chr2_1:39500686-39500705 None:intergenic 30.0%
! AAACAGGTCTGTATTGTTTT+TGG + chr2_1:39500708-39500727 None:intergenic 30.0%
!! TTTTGTTTCTTCTATGAAGC+TGG + chr2_1:39500818-39500837 None:intergenic 30.0%
!!! GTTGTTTTAAATTTGCATGC+AGG - chr2_1:39501315-39501334 Msa0207530:intron 30.0%
! CAATTTTCCCTATACCAAAA+GGG + chr2_1:39501722-39501741 None:intergenic 30.0%
! ACAATTTTCCCTATACCAAA+AGG + chr2_1:39501723-39501742 None:intergenic 30.0%
! AAGTTCTTTTTGCACATTTC+TGG + chr2_1:39502009-39502028 None:intergenic 30.0%
TGTGCAAAAAGAACTTGATA+TGG - chr2_1:39502013-39502032 Msa0207530:intron 30.0%
GTGCAAAAAGAACTTGATAT+GGG - chr2_1:39502014-39502033 Msa0207530:intron 30.0%
!! TGCTATCTCTATTTCTATCT+TGG - chr2_1:39502131-39502150 Msa0207530:CDS 30.0%
! ATAGCTAAACTTTTTGTCTC+AGG - chr2_1:39502223-39502242 Msa0207530:intron 30.0%
AACAATTTGCAAAGTACAGA+CGG + chr2_1:39502505-39502524 None:intergenic 30.0%
AGTGAATCTATATTTGCTTC+AGG - chr2_1:39502592-39502611 Msa0207530:intron 30.0%
GTGAATCTATATTTGCTTCA+GGG - chr2_1:39502593-39502612 Msa0207530:intron 30.0%
TGAATCTATATTTGCTTCAG+GGG - chr2_1:39502594-39502613 Msa0207530:intron 30.0%
GCTTGAAAGATTAAAAACAG+TGG + chr2_1:39502830-39502849 None:intergenic 30.0%
!! TCAGTTTGCTTTTGTCAAAT+CGG - chr2_1:39502915-39502934 Msa0207530:intron 30.0%
TCATGATGAATAAACTGACA+AGG - chr2_1:39503051-39503070 Msa0207530:CDS 30.0%
TAGTAGAGATTGTCTGAATA+AGG - chr2_1:39503458-39503477 Msa0207530:intron 30.0%
! TGATAGTGAGTCAAACATTT+AGG + chr2_1:39503969-39503988 None:intergenic 30.0%
! GAAAACAAGTAAGGCTTTAT+AGG + chr2_1:39504016-39504035 None:intergenic 30.0%
AGATCTCATGAAAACAAGTA+AGG + chr2_1:39504025-39504044 None:intergenic 30.0%
TCCATCTTCCAATTCATATA+TGG - chr2_1:39504154-39504173 Msa0207530:five_prime_UTR 30.0%
ACCATATATGAATTGGAAGA+TGG + chr2_1:39504158-39504177 None:intergenic 30.0%
TATATGGTTATGGTACTGTT+AGG - chr2_1:39504170-39504189 Msa0207530:five_prime_UTR 30.0%
CAAGAGAATAGAGTTGAAAC+AGG + chr2_1:39500724-39500743 None:intergenic 35.0%
! AGGAATAAAACGCATCGTTT+TGG + chr2_1:39500774-39500793 None:intergenic 35.0%
! CTTTCTGTTTGTGGCTTTTA+AGG - chr2_1:39500856-39500875 Msa0207530:CDS 35.0%
TGCAGGTGTAAAAATCAACA+TGG - chr2_1:39501332-39501351 Msa0207530:intron 35.0%
! GATGAAGATGATGATGTAAC+AGG + chr2_1:39501387-39501406 None:intergenic 35.0%
! AAATCCAAGCAAAGCTCTAA+TGG - chr2_1:39501465-39501484 Msa0207530:intron 35.0%
ACTGATTGATGAATGTCCTT+GGG + chr2_1:39501590-39501609 None:intergenic 35.0%
AACTGATTGATGAATGTCCT+TGG + chr2_1:39501591-39501610 None:intergenic 35.0%
! TTGTTGACCCTTTTGGTATA+GGG - chr2_1:39501712-39501731 Msa0207530:intron 35.0%
TGGTATAGGGAAAATTGTTC+AGG - chr2_1:39501725-39501744 Msa0207530:intron 35.0%
ATAGGGAAAATTGTTCAGGA+TGG - chr2_1:39501729-39501748 Msa0207530:intron 35.0%
TCGATTAGATCGTACGAAAT+AGG - chr2_1:39501774-39501793 Msa0207530:intron 35.0%
GACGTTAATGAATCATTTGC+AGG - chr2_1:39501821-39501840 Msa0207530:intron 35.0%
CTTAATCATGTTAAGACTGC+CGG - chr2_1:39501955-39501974 Msa0207530:intron 35.0%
TTAATCATGTTAAGACTGCC+GGG - chr2_1:39501956-39501975 Msa0207530:intron 35.0%
! ACTTGATATGGGTTGTTACT+CGG - chr2_1:39502025-39502044 Msa0207530:intron 35.0%
ATAGCACCAGATTGAAGATT+AGG - chr2_1:39502252-39502271 Msa0207530:intron 35.0%
TTGGGATTTCCTTTGTCTTT+AGG - chr2_1:39502333-39502352 Msa0207530:intron 35.0%
TTTGTCTTTAGGCTGTTACA+GGG - chr2_1:39502344-39502363 Msa0207530:intron 35.0%
! GTTAGCCTAGCTACATATTA+TGG - chr2_1:39502438-39502457 Msa0207530:intron 35.0%
AAGTTGTTCAAGTAGACACT+TGG - chr2_1:39502619-39502638 Msa0207530:intron 35.0%
AGTTGTTCAAGTAGACACTT+GGG - chr2_1:39502620-39502639 Msa0207530:intron 35.0%
!! GTTCTGAATTGACTTTTACC+TGG + chr2_1:39502727-39502746 None:intergenic 35.0%
! ACTATCTAAAATTCCGGAAG+AGG - chr2_1:39503076-39503095 Msa0207530:CDS 35.0%
TGTTAATTCTGATCCAGTTG+TGG - chr2_1:39503124-39503143 Msa0207530:CDS 35.0%
ACATCTAGATCATTCCATCT+GGG + chr2_1:39503306-39503325 None:intergenic 35.0%
AACATCTAGATCATTCCATC+TGG + chr2_1:39503307-39503326 None:intergenic 35.0%
ATAATGTGAAGTACATTGGG+TGG - chr2_1:39503340-39503359 Msa0207530:CDS 35.0%
! GAATGAATTGGTCACTTTAG+AGG - chr2_1:39503593-39503612 Msa0207530:intron 35.0%
ATTGGAAATTTAGCTGACAG+CGG - chr2_1:39503818-39503837 Msa0207530:intron 35.0%
TTAATTCAACGGGTGAAAGA+GGG - chr2_1:39504071-39504090 Msa0207530:five_prime_UTR 35.0%
TGAAGAGAAGAGAAGAGAAG+AGG + chr2_1:39500615-39500634 None:intergenic 40.0%
TGTTTCTTCTATGAAGCTGG+TGG + chr2_1:39500815-39500834 None:intergenic 40.0%
GAAAGTCTCAAATGAAGCTC+AGG + chr2_1:39500978-39500997 None:intergenic 40.0%
TCATCTTCATCTGACAGTGT+TGG - chr2_1:39501396-39501415 Msa0207530:intron 40.0%
GTTGGAAAATCCTCCAAACA+TGG - chr2_1:39501414-39501433 Msa0207530:CDS 40.0%
AGAACTAACTCCATGTTTGG+AGG + chr2_1:39501427-39501446 None:intergenic 40.0%
AGCAGAACTAACTCCATGTT+TGG + chr2_1:39501430-39501449 None:intergenic 40.0%
TAAGCCATTAGAGCTTTGCT+TGG + chr2_1:39501472-39501491 None:intergenic 40.0%
TTCCAAAATCAACGGAACTG+CGG - chr2_1:39501515-39501534 Msa0207530:intron 40.0%
TCATCAATCAGTTGCCTGAT+TGG - chr2_1:39501598-39501617 Msa0207530:CDS 40.0%
AAAGGGTCAACAAGCATATC+AGG + chr2_1:39501705-39501724 None:intergenic 40.0%
!! GATATGCTTGTTGACCCTTT+TGG - chr2_1:39501705-39501724 Msa0207530:CDS 40.0%
! CTTGTTGACCCTTTTGGTAT+AGG - chr2_1:39501711-39501730 Msa0207530:CDS 40.0%
!! TTCAGGATGGTCTTGTGTTT+CGG - chr2_1:39501742-39501761 Msa0207530:intron 40.0%
TAGATCGTACGAAATAGGTG+CGG - chr2_1:39501779-39501798 Msa0207530:intron 40.0%
AAGGTTAAGACTAACCACGT+CGG + chr2_1:39502075-39502094 None:intergenic 40.0%
TAGAGATAGCAGCTGAACTA+AGG + chr2_1:39502122-39502141 None:intergenic 40.0%
CTGTAACAGCCTAAAGACAA+AGG + chr2_1:39502345-39502364 None:intergenic 40.0%
CTTTGTCTTTAGGCTGTTAC+AGG - chr2_1:39502343-39502362 Msa0207530:intron 40.0%
AAAATGGTATGCGTCGTGAT+TGG - chr2_1:39502658-39502677 Msa0207530:intron 40.0%
! TGTCAAGATTTCCCCTGTTT+TGG + chr2_1:39502697-39502716 None:intergenic 40.0%
!! AAATCTTGACAAGAGCATCC+AGG - chr2_1:39502706-39502725 Msa0207530:CDS 40.0%
AGTGAAGAAAGGAGCAAGAA+AGG + chr2_1:39502749-39502768 None:intergenic 40.0%
TTTCTTGCTCCTTTCTTCAC+TGG - chr2_1:39502748-39502767 Msa0207530:CDS 40.0%
ATCTTATGGCCAGTGAAGAA+AGG + chr2_1:39502760-39502779 None:intergenic 40.0%
! ATCTCTATTTTCAGCCCAGA+TGG - chr2_1:39503289-39503308 Msa0207530:CDS 40.0%
CAATCAAACCACAATCCCTT+TGG + chr2_1:39503675-39503694 None:intergenic 40.0%
AGCTCATGACTCTCCAAAAT+TGG + chr2_1:39503716-39503735 None:intergenic 40.0%
!! ATTCCATGACTTTGGAGTAC+AGG - chr2_1:39503738-39503757 Msa0207530:intron 40.0%
TTGGAAATTTAGCTGACAGC+GGG - chr2_1:39503819-39503838 Msa0207530:intron 40.0%
AACATTTAGGTGCTCTGTGA+TGG + chr2_1:39503956-39503975 None:intergenic 40.0%
ATGTTTGACTCACTATCAGC+TGG - chr2_1:39503971-39503990 Msa0207530:intron 40.0%
GTTAATTCAACGGGTGAAAG+AGG - chr2_1:39504070-39504089 Msa0207530:five_prime_UTR 40.0%
TATATAACGAAGTGGCTGGC+TGG - chr2_1:39500517-39500536 Msa0207530:three_prime_UTR 45.0%
GGAGGTGAATGAGAATGAGA+AGG + chr2_1:39500794-39500813 None:intergenic 45.0%
TTCTTCTATGAAGCTGGTGG+AGG + chr2_1:39500812-39500831 None:intergenic 45.0%
ATTCAAGGTGGTTGAGAGAG+AGG - chr2_1:39501137-39501156 Msa0207530:intron 45.0%
!! GGAGTTAGTTCTGCTAACCT+TGG - chr2_1:39501435-39501454 Msa0207530:CDS 45.0%
!! GTTAGTTCTGCTAACCTTGG+AGG - chr2_1:39501438-39501457 Msa0207530:CDS 45.0%
GCTTGGATTTGAATCCTCCA+AGG + chr2_1:39501455-39501474 None:intergenic 45.0%
GCAGCACCTTCCAAAATCAA+CGG - chr2_1:39501507-39501526 Msa0207530:intron 45.0%
!!! GCAGTTCCGTTGATTTTGGA+AGG + chr2_1:39501516-39501535 None:intergenic 45.0%
!!! AACCGCAGTTCCGTTGATTT+TGG + chr2_1:39501520-39501539 None:intergenic 45.0%
AACTGCGGTTACAACTACGA+CGG - chr2_1:39501530-39501549 Msa0207530:intron 45.0%
CTTCTCAGCAGCAAGGAAAA+TGG + chr2_1:39501649-39501668 None:intergenic 45.0%
AGCAGTGGATGATGCTTGAT+TGG - chr2_1:39501667-39501686 Msa0207530:CDS 45.0%
ACAAGCATATCAGGTCGTCT+AGG + chr2_1:39501696-39501715 None:intergenic 45.0%
AGTAGACACTTGGGTTTCTG+CGG - chr2_1:39502629-39502648 Msa0207530:intron 45.0%
GTTTCTGCGGCAGGAAAAAA+TGG - chr2_1:39502642-39502661 Msa0207530:intron 45.0%
AAAAACAGTGGCCAGTCACA+AGG + chr2_1:39502818-39502837 None:intergenic 45.0%
AAAATTCCGGAAGAGGTCAG+AGG - chr2_1:39503083-39503102 Msa0207530:CDS 45.0%
TCGGCTGAATATATTCGCAC+TGG - chr2_1:39503182-39503201 Msa0207530:CDS 45.0%
! GAAGTACATTGGGTGGATTC+TGG - chr2_1:39503347-39503366 Msa0207530:CDS 45.0%
CCACAATCCCTTTGGTTAAG+CGG + chr2_1:39503667-39503686 None:intergenic 45.0%
TGACTCTCCAAAATTGGCTG+TGG + chr2_1:39503710-39503729 None:intergenic 45.0%
TGAGCTGCATTCCATGACTT+TGG - chr2_1:39503730-39503749 Msa0207530:intron 45.0%
!! CATGACTTTGGAGTACAGGA+GGG - chr2_1:39503742-39503761 Msa0207530:intron 45.0%
! ATGATGGTGCCGAGATTGTT+AGG - chr2_1:39503873-39503892 Msa0207530:intron 45.0%
! TGATGGTGCCGAGATTGTTA+GGG - chr2_1:39503874-39503893 Msa0207530:intron 45.0%
AGTCCTACCCCTAACAATCT+CGG + chr2_1:39503885-39503904 None:intergenic 45.0%
AGATTGTTAGGGGTAGGACT+GGG - chr2_1:39503885-39503904 Msa0207530:intron 45.0%
TTTGACTCACTATCAGCTGG+AGG - chr2_1:39503974-39503993 Msa0207530:intron 45.0%
GAGCAGAGGAAGAATAGAGT+AGG + chr2_1:39504136-39504155 None:intergenic 45.0%
TGAATTGGAAGATGGAGCAG+AGG + chr2_1:39504150-39504169 None:intergenic 45.0%
GTGAGTGAGTGGCACAGAAT+TGG + chr2_1:39500546-39500565 None:intergenic 50.0%
GGTTACAACTACGACGGTGA+AGG - chr2_1:39501536-39501555 Msa0207530:intron 50.0%
CACCATCACAACATCACCCA+AGG - chr2_1:39501571-39501590 Msa0207530:CDS 50.0%
GTCCTTGGGTGATGTTGTGA+TGG + chr2_1:39501576-39501595 None:intergenic 50.0%
! GCAAGAAGCATGCTCCAATC+AGG + chr2_1:39501615-39501634 None:intergenic 50.0%
CTCAGCAGCAAGGAAAATGG+TGG + chr2_1:39501646-39501665 None:intergenic 50.0%
AAAGCCATCACCAAGAAGCC+CGG + chr2_1:39501977-39501996 None:intergenic 50.0%
! ATGGGTTGTTACTCGGATGC+AGG - chr2_1:39502032-39502051 Msa0207530:intron 50.0%
TGTTACTCGGATGCAGGTTG+TGG - chr2_1:39502038-39502057 Msa0207530:intron 50.0%
TGGTTGATCGTTATCCGACG+TGG - chr2_1:39502058-39502077 Msa0207530:CDS 50.0%
TTGTGCGGGATGCCAAAACA+GGG - chr2_1:39502682-39502701 Msa0207530:intron 50.0%
GAATGTGCATGCCTTGTGAC+TGG - chr2_1:39502804-39502823 Msa0207530:CDS 50.0%
ATCTCTCCTCTGACCTCTTC+CGG + chr2_1:39503092-39503111 None:intergenic 50.0%
TTCTGATCCAGTTGTGGACG+AGG - chr2_1:39503130-39503149 Msa0207530:CDS 50.0%
CTGTTATCCTCGTCCACAAC+TGG + chr2_1:39503140-39503159 None:intergenic 50.0%
! GTACATTGGGTGGATTCTGG+AGG - chr2_1:39503350-39503369 Msa0207530:CDS 50.0%
AACAAGAACGCGAGAAAGCG+AGG + chr2_1:39503413-39503432 None:intergenic 50.0%
TTATCGGGCCGCTTAACCAA+AGG - chr2_1:39503656-39503675 Msa0207530:intron 50.0%
TATCGGGCCGCTTAACCAAA+GGG - chr2_1:39503657-39503676 Msa0207530:intron 50.0%
CCGCTTAACCAAAGGGATTG+TGG - chr2_1:39503664-39503683 Msa0207530:intron 50.0%
! GAGTGCTCCACAGCCAATTT+TGG - chr2_1:39503700-39503719 Msa0207530:intron 50.0%
CCTCCTGTACTCCAAAGTCA+TGG + chr2_1:39503744-39503763 None:intergenic 50.0%
!! CCATGACTTTGGAGTACAGG+AGG - chr2_1:39503741-39503760 Msa0207530:intron 50.0%
TTGGAGTACAGGAGGGAATG+TGG - chr2_1:39503749-39503768 Msa0207530:intron 50.0%
AGCACCAGAGACAGATGTCA+GGG + chr2_1:39503795-39503814 None:intergenic 50.0%
!! TCTGTCTCTGGTGCTGACAT+TGG - chr2_1:39503800-39503819 Msa0207530:intron 50.0%
! CACTTGCTTCGACTCGATGA+TGG - chr2_1:39503857-39503876 Msa0207530:intron 50.0%
! GATGGTGCCGAGATTGTTAG+GGG - chr2_1:39503875-39503894 Msa0207530:intron 50.0%
GAGATTGTTAGGGGTAGGAC+TGG - chr2_1:39503884-39503903 Msa0207530:intron 50.0%
! TATCAGCTGGAGGTGCAGAT+TGG - chr2_1:39503984-39504003 Msa0207530:intron 50.0%
TCAACGGGTGAAAGAGGGAT+AGG - chr2_1:39504076-39504095 Msa0207530:five_prime_UTR 50.0%
CAACGGGTGAAAGAGGGATA+GGG - chr2_1:39504077-39504096 Msa0207530:five_prime_UTR 50.0%
AAGCCAGCGATGTGAGTGAG+TGG + chr2_1:39500557-39500576 None:intergenic 55.0%
TCCTTGCTGCTGAGAAGCAG+TGG - chr2_1:39501652-39501671 Msa0207530:CDS 55.0%
TCCACTGCTTCTCAGCAGCA+AGG + chr2_1:39501656-39501675 None:intergenic 55.0%
GTTAAGACTGCCGGGCTTCT+TGG - chr2_1:39501964-39501983 Msa0207530:intron 55.0%
!! GGGCTTCTTGGTGATGGCTT+TGG - chr2_1:39501976-39501995 Msa0207530:intron 55.0%
!! TGCGTCGTGATTGGCTTGTG+CGG - chr2_1:39502667-39502686 Msa0207530:intron 55.0%
CTTGTGCGGGATGCCAAAAC+AGG - chr2_1:39502681-39502700 Msa0207530:intron 55.0%
TGTGCGGGATGCCAAAACAG+GGG - chr2_1:39502683-39502702 Msa0207530:intron 55.0%
AGAACGCGAGAAAGCGAGGA+GGG + chr2_1:39503409-39503428 None:intergenic 55.0%
AAGAACGCGAGAAAGCGAGG+AGG + chr2_1:39503410-39503429 None:intergenic 55.0%
AGTACAGGAGGGAATGTGGC+AGG - chr2_1:39503753-39503772 Msa0207530:intron 55.0%
CAGTCCCTGACATCTGTCTC+TGG - chr2_1:39503788-39503807 Msa0207530:intron 55.0%
CAGCACCAGAGACAGATGTC+AGG + chr2_1:39503796-39503815 None:intergenic 55.0%
GTGCCGAGATTGTTAGGGGT+AGG - chr2_1:39503879-39503898 Msa0207530:intron 55.0%
TTGTTAGGGGTAGGACTGGG+TGG - chr2_1:39503888-39503907 Msa0207530:intron 55.0%
! GTGCCACTCACTCACATCGC+TGG - chr2_1:39500551-39500570 Msa0207530:three_prime_UTR 60.0%
!! CACTCACATCGCTGGCTTGC+TGG - chr2_1:39500559-39500578 Msa0207530:three_prime_UTR 60.0%
ACTGCCGGGCTTCTTGGTGA+TGG - chr2_1:39501970-39501989 Msa0207530:intron 60.0%
GACACTTGGGTTTCTGCGGC+AGG - chr2_1:39502633-39502652 Msa0207530:intron 60.0%
!! GCGTCGTGATTGGCTTGTGC+GGG - chr2_1:39502668-39502687 Msa0207530:intron 60.0%
GAACGCGAGAAAGCGAGGAG+GGG + chr2_1:39503408-39503427 None:intergenic 60.0%
TTAGGGGTAGGACTGGGTGG+AGG - chr2_1:39503891-39503910 Msa0207530:intron 60.0%
CAGCAGGGGGCGGGATAGCC+AGG - chr2_1:39500485-39500504 Msa0207530:three_prime_UTR 75.0%
CAGGGGGCGGGATAGCCAGG+TGG - chr2_1:39500488-39500507 Msa0207530:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 39500477 39504296 39500477 ID=Msa0207530;Name=Msa0207530
chr2_1 mRNA 39500477 39504296 39500477 ID=Msa0207530-mRNA-1;Parent=Msa0207530;Name=Msa0207530-mRNA-1;_AED=0.04;_eAED=0.04;_QI=305|1|1|1|0.83|0.71|7|326|415
chr2_1 exon 39500477 39501072 39500477 ID=Msa0207530-mRNA-1:exon:12414;Parent=Msa0207530-mRNA-1
chr2_1 exon 39501402 39501470 39501402 ID=Msa0207530-mRNA-1:exon:12413;Parent=Msa0207530-mRNA-1
chr2_1 exon 39501562 39501730 39501562 ID=Msa0207530-mRNA-1:exon:12412;Parent=Msa0207530-mRNA-1
chr2_1 exon 39502046 39502159 39502046 ID=Msa0207530-mRNA-1:exon:12411;Parent=Msa0207530-mRNA-1
chr2_1 exon 39502694 39502827 39502694 ID=Msa0207530-mRNA-1:exon:12410;Parent=Msa0207530-mRNA-1
chr2_1 exon 39502931 39503436 39502931 ID=Msa0207530-mRNA-1:exon:12409;Parent=Msa0207530-mRNA-1
chr2_1 exon 39504006 39504296 39504006 ID=Msa0207530-mRNA-1:exon:12408;Parent=Msa0207530-mRNA-1
chr2_1 five_prime_UTR 39504006 39504296 39504006 ID=Msa0207530-mRNA-1:five_prime_utr;Parent=Msa0207530-mRNA-1
chr2_1 five_prime_UTR 39503423 39503436 39503423 ID=Msa0207530-mRNA-1:five_prime_utr;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39502931 39503422 39502931 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39502694 39502827 39502694 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39502046 39502159 39502046 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39501562 39501730 39501562 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39501402 39501470 39501402 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 CDS 39500803 39501072 39500803 ID=Msa0207530-mRNA-1:cds;Parent=Msa0207530-mRNA-1
chr2_1 three_prime_UTR 39500477 39500802 39500477 ID=Msa0207530-mRNA-1:three_prime_utr;Parent=Msa0207530-mRNA-1
Gene Sequence

>Msa0207530

ATGGTTGCAACTGCTGCAACATCTTCGTTCTTTCCTGTTACATCATCATCTTCATCTGACAGTGTTGGAAAATCCTCCAAACATGGAGTTAGTTCTGCTAACCTTGGAGGATTCAAATCCAAGCAAAGCTCTAATGGCTTAAACATTAAAGCAAATGCAGCACCTTCCAAAATCAACGGAACTGCGGTTACAACTACGACGGTGAAGGTTGAAAATGATTCACCATCACAACATCACCCAAGGACATTCATCAATCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTGTTACCACCATTTTCCTTGCTGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCTAGACGACCTGATATGCTTGTTGACCCTTTTGGTATAGGGAAAATTGTTCAGGATGGTCTTGTGTTTCGGCAAAACTTTTCGATTAGATCGTACGAAATAGGTGCGGATAAAACTGCGTCTATAGAGACGTTAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAGACTGCCGGGCTTCTTGGTGATGGCTTTGGTTCTACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTTGTTACTCGGATGCAGGTTGTGGTTGATCGTTATCCGACGTGGGGTGAAGTTGTTCAAGTAGACACTTGGGTTTCTGCGGCAGGAAAAAATGGTATGCGTCGTGATTGGCTTGTGCGGGATGCCAAAACAGGGGAAATCTTGACAAGAGCATCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAAACTATCTAAAATTCCGGAAGAGGTCAGAGGAGAGATAGAGCATTATTTTGTTAATTCTGATCCAGTTGTGGACGAGGATAACAGAAAACTAACTAAACTTGATGATTCGGCTGAATATATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAATCAGCATGTTAATAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCAATTTTGGAGAGTCATGAGCTGCATTCCATGACTTTGGAGTACAGGAGGGAATGTGGCAGGAACAGTGTACTTCAGTCCCTGACATCTGTCTCTGGTGCTGACATTGGAAATTTAGCTGACAGCGGGTTTGTTGAATGCAAACACTTGCTTCGACTCGATGATGGTGCCGAGATTGTTAGGGGTAGGACTGGGTGGAGGCCAAAACCTATCAACAATTTTGATGTTCTGAATCAGTTTCCATCACAGAGCACCTAA

Protein sequence

>Msa0207530

MVATAATSSFFPVTSSSSSDSVGKSSKHGVSSANLGGFKSKQSSNGLNIKANAAPSKINGTAVTTTTVKVENDSPSQHHPRTFINQLPDWSMLLAAVTTIFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGEVVQVDTWVSAAGKNGMRRDWLVRDAKTGEILTRASSVWVMMNKLTRKLSKIPEEVRGEIEHYFVNSDPVVDEDNRKLTKLDDSAEYIRTGLSPRWNDLDVNQHVNNVKYIGWILESAPQPILESHELHSMTLEYRRECGRNSVLQSLTSVSGADIGNLADSGFVECKHLLRLDDGAEIVRGRTGWRPKPINNFDVLNQFPSQST*