AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252040 MtrunA17_Chr8g0367931 95.775 568 14 2 1 566 1 560 0.0 1088
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252040 AT3G26570.2 72.389 565 130 8 23 566 14 573 0.0 751
Msa1252040 AT3G26570.1 72.389 565 130 8 23 566 40 599 0.0 751

Find 144 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAGGGTTTGGTCTAGTTTA+TGG 0.115139 8_2:+48810145 Msa1252040:CDS
GCTGCAGCTGCTGCTTGTCC+TGG 0.170623 8_2:-48810606 None:intergenic
GAGGAGCTGGAGCTGTATTT+TGG 0.186713 8_2:+48810167 Msa1252040:CDS
TGTTTATTTGTGGTGAAATT+TGG 0.201876 8_2:+48811480 Msa1252040:CDS
CCGGCCCATGTCCGACCTTT+TGG 0.230396 8_2:+48811938 Msa1252040:CDS
GAAACTAGGGCTACCGATAT+CGG 0.248191 8_2:+48811193 Msa1252040:CDS
CCTTTGTTTATGACATCTTT+AGG 0.248421 8_2:+48808482 Msa1252040:CDS
GAATCTTTGTGTTATTCTTT+AGG 0.268299 8_2:-48807992 None:intergenic
TGGAACCGTCGGGGCTTTCC+TGG 0.279990 8_2:+48810728 Msa1252040:CDS
TGCTGCTGGTACTTGGTTAC+AGG 0.284265 8_2:+48808796 Msa1252040:CDS
GTTCTTGCTTGGGGTGGATT+TGG 0.288654 8_2:+48811041 Msa1252040:CDS
AGCTTCTTCTCTGATATTAC+AGG 0.298759 8_2:+48810834 Msa1252040:CDS
GGTGGATTTGGAATCGTTGC+AGG 0.303853 8_2:+48811053 Msa1252040:CDS
CAGAGAAGAAGCTTATGTTT+TGG 0.304120 8_2:-48810824 None:intergenic
CACTTGCTGCTGCTGGTACT+TGG 0.307974 8_2:+48808789 Msa1252040:CDS
TTCATGGGCGGTTACTATTC+CGG 0.308155 8_2:+48811307 Msa1252040:CDS
CTGCAGCTGCTGCTTGTCCT+GGG 0.310215 8_2:-48810605 None:intergenic
GAAATATATGAGAGTTTCTA+TGG 0.311789 8_2:-48808151 None:intergenic
GTTCTGTTTGCTTCGAAACT+AGG 0.311873 8_2:+48811179 Msa1252040:CDS
GAAGATGTCCGAGTTGTTTA+CGG 0.312285 8_2:-48810764 None:intergenic
ACTCTTTCTCTTCATTCATA+TGG 0.320845 8_2:+48807958 Msa1252040:five_prime_UTR
TCCGATTGATGTTCTTGCTT+GGG 0.350128 8_2:+48811031 Msa1252040:CDS
GAGAATAACGATGAAGTATC+AGG 0.354438 8_2:+48808380 Msa1252040:CDS
GCTGTATTTCTCGGCGTAAC+TGG 0.359205 8_2:+48810639 Msa1252040:CDS
TGAAGGAGATTTGTGCTTCA+TGG 0.362113 8_2:+48811291 Msa1252040:CDS
CAAGTCAAATACTCCACATT+TGG 0.370050 8_2:+48810791 Msa1252040:CDS
CTTTCTTCACTTGCTGCTGC+TGG 0.370685 8_2:+48808782 Msa1252040:CDS
ACGCAGTTTGCATCATACTA+TGG 0.372671 8_2:+48810082 Msa1252040:intron
GATTCAAATTCATTTCTTGA+TGG 0.377613 8_2:-48808067 None:intergenic
ACTCAACTTGAAATAGTTTA+CGG 0.382692 8_2:+48810867 Msa1252040:CDS
TTCCGATTGATGTTCTTGCT+TGG 0.384604 8_2:+48811030 Msa1252040:CDS
GCACCAATTGCTGTATTTCT+CGG 0.392067 8_2:+48810630 Msa1252040:CDS
TACAGAGTTATAGCTACAAT+TGG 0.393371 8_2:+48811092 Msa1252040:CDS
AATGCCTGGCTTAGAGCTAT+TGG 0.394818 8_2:-48810699 None:intergenic
ACACTAGTTGGTGCAGTAAT+GGG 0.403375 8_2:+48811224 Msa1252040:CDS
GACATCTTTAGGACAAGGTT+TGG 0.406475 8_2:+48808493 Msa1252040:CDS
TGTTTGGATTCTATATGGCT+TGG 0.409298 8_2:+48808552 Msa1252040:CDS
AAAGATGATAAGCTAGCAAA+AGG 0.409575 8_2:-48808281 None:intergenic
CATTAGCTTGTGGAACCGTC+GGG 0.412945 8_2:+48810718 Msa1252040:CDS
AGCCGAGTTTGCGGCTGCCT+CGG 0.415177 8_2:+48811154 Msa1252040:CDS
AAACTAGGGCTACCGATATC+GGG 0.416528 8_2:+48811194 Msa1252040:CDS
TGAGATTAACTGTTTATTTG+TGG 0.421107 8_2:+48811470 Msa1252040:CDS
GGTCTAGTTTATGGAGGAGC+TGG 0.421494 8_2:+48810154 Msa1252040:CDS
ATTTCAAGTTGAGTACCCTT+TGG 0.427540 8_2:-48810858 None:intergenic
ATGGGAACTTCTGTTGGATC+TGG 0.444826 8_2:+48808605 Msa1252040:CDS
ATACAATGTGTAGTAGATAC+TGG 0.453343 8_2:-48810109 None:intergenic
ATCTACTACACATTGTATAG+TGG 0.454887 8_2:+48810114 Msa1252040:CDS
AAGACAAAGATGTTATCATA+TGG 0.454924 8_2:+48808521 Msa1252040:CDS
GCATTAGCTTGTGGAACCGT+CGG 0.458457 8_2:+48810717 Msa1252040:CDS
CACCGAGGCAGCCGCAAACT+CGG 0.458951 8_2:-48811156 None:intergenic
ACGCCGAGAAATACAGCAAT+TGG 0.460216 8_2:-48810633 None:intergenic
TTCTATATGGCTTGGAACAT+TGG 0.470907 8_2:+48808560 Msa1252040:CDS
AACGATGTCTCCAACGCAAT+AGG 0.473437 8_2:+48810948 Msa1252040:CDS
AGGATTTGCAGCCGAGTTTG+CGG 0.475291 8_2:+48811145 Msa1252040:CDS
TACACTAGTTGGTGCAGTAA+TGG 0.476930 8_2:+48811223 Msa1252040:CDS
GAAGGAGATTTGTGCTTCAT+GGG 0.479920 8_2:+48811292 Msa1252040:CDS
GTGGGAGCAATGGTAGGGTT+TGG 0.480615 8_2:+48810133 Msa1252040:CDS
ATGATGGAATATGAAATATA+TGG 0.481370 8_2:+48807785 Msa1252040:five_prime_UTR
ATTCTACAAGGCGCAGCAAA+AGG 0.482474 8_2:+48810993 Msa1252040:CDS
CCAAAAGGTCGGACATGGGC+CGG 0.483454 8_2:-48811938 None:intergenic
ATGCTCCAAAAGGTCGGACA+TGG 0.485523 8_2:-48811943 None:intergenic
GATACTGCTGCTCCCAATAG+TGG 0.485743 8_2:-48810229 None:intergenic
TAGCAAGAGTGATTTCTTCG+TGG 0.487529 8_2:+48810197 Msa1252040:CDS
GATCTGGTGCATTGTCACTT+AGG 0.491977 8_2:+48808621 Msa1252040:CDS
TTCTGTTTGCTTCGAAACTA+GGG 0.492039 8_2:+48811180 Msa1252040:CDS
CCCCAAGCAAGAACATCAAT+CGG 0.492615 8_2:-48811032 None:intergenic
CAACATGCTGCAACAGAAAA+CGG 0.492938 8_2:+48808356 Msa1252040:CDS
TGAAGAGAAAGAGTGGAAGT+AGG 0.496911 8_2:-48807949 None:intergenic
TCGGCTGCAAATCCTCTTGT+CGG 0.500344 8_2:-48811137 None:intergenic
TGTATAGTGGGAGCAATGGT+AGG 0.500362 8_2:+48810127 Msa1252040:CDS
GTTGGTGCAGTAATGGGAGT+TGG 0.502537 8_2:+48811230 Msa1252040:CDS
CTCTGATATTACAGGTCCAA+AGG 0.503091 8_2:+48810842 Msa1252040:CDS
CTCCAACGCAATAGGTCCAT+TGG 0.509756 8_2:+48810956 Msa1252040:CDS
TGTGGTGAAATTTGGAGAAG+AGG 0.513040 8_2:+48811488 Msa1252040:CDS
AGTGTATGTGTCCCCGATAT+CGG 0.513359 8_2:-48811206 None:intergenic
TACGGATAGTTCTGTTGACC+AGG 0.515812 8_2:-48810746 None:intergenic
ATGAATTTGAATCACTCTTG+TGG 0.516731 8_2:+48808077 Msa1252040:CDS
TGGGCGGTTACTATTCCGGT+TGG 0.521858 8_2:+48811311 Msa1252040:CDS
AAGAAAGAGTGGAAAGAATG+TGG 0.521922 8_2:-48807915 None:intergenic
AGAGTGGAAGTAGGTGATGA+TGG 0.524249 8_2:-48807940 None:intergenic
CGTTGCAGGGCTAATGATGT+GGG 0.524372 8_2:+48811067 Msa1252040:CDS
CGGTTCCACAAGCTAATGCC+TGG 0.524860 8_2:-48810713 None:intergenic
AATGCAATGGGAACTTCTGT+TGG 0.531915 8_2:+48808599 Msa1252040:CDS
CTAAGCCAGGCATTAGCTTG+TGG 0.542312 8_2:+48810708 Msa1252040:CDS
AATGATGTTGCAAATGCAAT+GGG 0.542803 8_2:+48808587 Msa1252040:CDS
CCGATTGATGTTCTTGCTTG+GGG 0.552108 8_2:+48811032 Msa1252040:CDS
GTGGATTTGGAATCGTTGCA+GGG 0.552937 8_2:+48811054 Msa1252040:CDS
TTGTCTACAAATGCATCCGA+AGG 0.553473 8_2:+48810257 Msa1252040:CDS
ATGTTTGGTGAAAGTGGAAG+TGG 0.554452 8_2:-48808224 None:intergenic
TCGGGGACACATACACTAGT+TGG 0.555114 8_2:+48811212 Msa1252040:CDS
CGAGTTTGCGGCTGCCTCGG+TGG 0.555593 8_2:+48811157 Msa1252040:CDS
GCTAAAACCGATGCTCCAAA+AGG 0.555709 8_2:-48811953 None:intergenic
ATTGATGTTCTTGCTTGGGG+TGG 0.555893 8_2:+48811035 Msa1252040:CDS
GGGTTTGGTCTAGTTTATGG+AGG 0.557081 8_2:+48810148 Msa1252040:CDS
TCGTTGCAGGGCTAATGATG+TGG 0.557121 8_2:+48811066 Msa1252040:CDS
TGTTTCATGTCATTTGCTCA+CGG 0.557308 8_2:+48810921 Msa1252040:CDS
TTTGCTATGTTTGGTGAAAG+TGG 0.557718 8_2:-48808230 None:intergenic
AGTTTGCATCATACTATGGT+TGG 0.559979 8_2:+48810086 Msa1252040:intron
TCTGATATTACAGGTCCAAA+GGG 0.566683 8_2:+48810843 Msa1252040:CDS
ATAGCTAATGCACCGGCCAA+TGG 0.568991 8_2:-48810972 None:intergenic
TGTGACTAGTACAATGCAGA+AGG 0.570955 8_2:+48808703 Msa1252040:CDS
TACAATTGGAAAGAAAATAA+CGG 0.573343 8_2:+48811106 Msa1252040:CDS
GAAGAATATAAGTGAATGAG+TGG 0.575850 8_2:-48807854 None:intergenic
AAGATGATAAGCTAGCAAAA+GGG 0.577341 8_2:-48808280 None:intergenic
TCTACTACACATTGTATAGT+GGG 0.579166 8_2:+48810115 Msa1252040:CDS
TGTGTTGACAGCTGCAGTGT+TGG 0.582448 8_2:+48808649 Msa1252040:CDS
CCTAAAGATGTCATAAACAA+AGG 0.582464 8_2:-48808482 None:intergenic
TATTAGGCATAAGTATCAGT+CGG 0.582550 8_2:+48811872 Msa1252040:intron
GTATAGTGGGAGCAATGGTA+GGG 0.585259 8_2:+48810128 Msa1252040:CDS
TAACGATGAAGTATCAGGAA+TGG 0.585273 8_2:+48808385 Msa1252040:CDS
TGCTCCAAAAGGTCGGACAT+GGG 0.590352 8_2:-48811942 None:intergenic
GCTAAGTGGGAAAGCAGCAA+AGG 0.591804 8_2:-48810667 None:intergenic
TTGGAGAAGAGGATCGGCAA+GGG 0.595338 8_2:+48811499 Msa1252040:CDS
TAATGATGTTGCAAATGCAA+TGG 0.596839 8_2:+48808586 Msa1252040:CDS
TATAACAATATGTATAGTAA+TGG 0.596864 8_2:+48808445 Msa1252040:CDS
TGATGATGGTGAAGAAAGAG+TGG 0.596925 8_2:-48807926 None:intergenic
ACATTGTATAGTGGGAGCAA+TGG 0.597997 8_2:+48810123 Msa1252040:CDS
TTGTAGAATAGCTAATGCAC+CGG 0.598942 8_2:-48810979 None:intergenic
AGAAACTCTCTTAGAAACAA+AGG 0.598982 8_2:-48808191 None:intergenic
ATATGAATGAAGAGAAAGAG+TGG 0.599742 8_2:-48807956 None:intergenic
AAACAGTTAATCTCAAAAGA+CGG 0.605053 8_2:-48811462 None:intergenic
TGAAATTTGGAGAAGAGGAT+CGG 0.607910 8_2:+48811493 Msa1252040:CDS
AACGCAATAGGTCCATTGGC+CGG 0.610227 8_2:+48810960 Msa1252040:CDS
AAAGTGGAAGTGGCTTCACA+TGG 0.610618 8_2:-48808214 None:intergenic
GGTGCATTAGCTATTCTACA+AGG 0.615570 8_2:+48810981 Msa1252040:CDS
AGAACTATCCGTAAACAACT+CGG 0.621558 8_2:+48810756 Msa1252040:CDS
ATGGGAGTTGGATTCGCGAG+AGG 0.625208 8_2:+48811242 Msa1252040:CDS
TTTATGACATCTTTAGGACA+AGG 0.625714 8_2:+48808488 Msa1252040:CDS
AAACCGATGCTCCAAAAGGT+CGG 0.633672 8_2:-48811949 None:intergenic
ACGGAACTTACACCGACAAG+AGG 0.634990 8_2:+48811125 Msa1252040:CDS
GGAGATTTGTGCTTCATGGG+CGG 0.643143 8_2:+48811295 Msa1252040:CDS
GTTGACCAGGAAAGCCCCGA+CGG 0.645332 8_2:-48810733 None:intergenic
TTCATGTCATTTGCTCACGG+TGG 0.649798 8_2:+48810924 Msa1252040:CDS
TTTGGAGAAGAGGATCGGCA+AGG 0.650366 8_2:+48811498 Msa1252040:CDS
ATTAGCTTGTGGAACCGTCG+GGG 0.654249 8_2:+48810719 Msa1252040:CDS
AACTAGGGCTACCGATATCG+GGG 0.656003 8_2:+48811195 Msa1252040:CDS
TGTCTACAAATGCATCCGAA+GGG 0.657192 8_2:+48810258 Msa1252040:CDS
TGTTAGATCAGAAACAGTGA+AGG 0.658218 8_2:+48811274 Msa1252040:CDS
TGGTTTCTATGTGAAGACTG+TGG 0.659744 8_2:+48811539 Msa1252040:CDS
GTGACTAGTACAATGCAGAA+GGG 0.662462 8_2:+48808704 Msa1252040:CDS
GTATACAGTGCAAGTAACCC+AGG 0.669512 8_2:+48810588 Msa1252040:CDS
GTTGCAGGGCTAATGATGTG+GGG 0.715224 8_2:+48811068 Msa1252040:CDS
CGAAGCAAACAGAACCACCG+AGG 0.756636 8_2:-48811171 None:intergenic
GTGGTGCATGAAGCTTCTTG+AGG 0.778176 8_2:-48807835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACAATATGTATAGTAA+TGG + chr8_2:48808445-48808464 Msa1252040:CDS 15.0%
!! TTTCAGAGTAAATTAAAAAT+TGG - chr8_2:48809134-48809153 None:intergenic 15.0%
!!! TATCTTTTGATAATTTAACA+TGG + chr8_2:48811795-48811814 Msa1252040:intron 15.0%
!!! ATGATGGAATATGAAATATA+TGG + chr8_2:48807785-48807804 Msa1252040:five_prime_UTR 20.0%
!!! TGATGTTTTTTTTGTATGTT+TGG - chr8_2:48808114-48808133 None:intergenic 20.0%
!!! GTATTGAATTTGTTAACAAT+TGG + chr8_2:48808917-48808936 Msa1252040:intron 20.0%
!! AAAAGTAATTAGGTGTATTA+TGG + chr8_2:48808986-48809005 Msa1252040:intron 20.0%
!!! TAATCAAGTTGAAAATTTGA+AGG + chr8_2:48809021-48809040 Msa1252040:intron 20.0%
!!! AATCAAGTTGAAAATTTGAA+GGG + chr8_2:48809022-48809041 Msa1252040:intron 20.0%
!! TCAAAACAATGATAATACAA+AGG + chr8_2:48809108-48809127 Msa1252040:intron 20.0%
!!! AGTCATAAAAGAGATAATTT+TGG - chr8_2:48809801-48809820 None:intergenic 20.0%
!! ATAATCCAATGAACTTAATT+AGG + chr8_2:48810041-48810060 Msa1252040:intron 20.0%
!! TTAATGCAACATTTATTTCA+TGG + chr8_2:48810289-48810308 Msa1252040:intron 20.0%
!! TACAATTGGAAAGAAAATAA+CGG + chr8_2:48811106-48811125 Msa1252040:CDS 20.0%
!!! TTTTCAAGATATAATAGAAC+AGG + chr8_2:48811402-48811421 Msa1252040:intron 20.0%
!! TGAAATAATTTAGCAATCTT+TGG + chr8_2:48811614-48811633 Msa1252040:intron 20.0%
!! TGAAAATTCAGAGAAAATAT+TGG + chr8_2:48811648-48811667 Msa1252040:intron 20.0%
!!! AACTATTTTTGTTGCTATGA+TGG + chr8_2:48807769-48807788 Msa1252040:five_prime_UTR 25.0%
!! GAATCTTTGTGTTATTCTTT+AGG - chr8_2:48807995-48808014 None:intergenic 25.0%
! GATTCAAATTCATTTCTTGA+TGG - chr8_2:48808070-48808089 None:intergenic 25.0%
! GAAATATATGAGAGTTTCTA+TGG - chr8_2:48808154-48808173 None:intergenic 25.0%
!!! TTCAAACTTTTTGCTATGTT+TGG - chr8_2:48808242-48808261 None:intergenic 25.0%
! AAGACAAAGATGTTATCATA+TGG + chr8_2:48808521-48808540 Msa1252040:CDS 25.0%
!!! ACTTTTGTTTGGATTCTATA+TGG + chr8_2:48808547-48808566 Msa1252040:CDS 25.0%
! TCAACAAGATCTTATATTCA+GGG - chr8_2:48808865-48808884 None:intergenic 25.0%
!!! ATCAAGTTGAAAATTTGAAG+GGG + chr8_2:48809023-48809042 Msa1252040:intron 25.0%
!! TACTCTGAAAATTTGCAATT+TGG + chr8_2:48809144-48809163 Msa1252040:intron 25.0%
!!! CAATTTGGTTTTTGTGATAT+AGG + chr8_2:48809159-48809178 Msa1252040:intron 25.0%
! TACCATCTTAGAATTTCAAT+TGG + chr8_2:48809332-48809351 Msa1252040:intron 25.0%
!! ATCCAATTGAAATTCTAAGA+TGG - chr8_2:48809337-48809356 None:intergenic 25.0%
! TACAAATGACACATTTCTAA+TGG - chr8_2:48809527-48809546 None:intergenic 25.0%
! CACTTAGAAAATGTAAACTA+AGG - chr8_2:48809565-48809584 None:intergenic 25.0%
!!! TTAAAATGATGCTGTTGTTT+TGG - chr8_2:48809732-48809751 None:intergenic 25.0%
!! TTGAGTTTTCTGAGTTATTA+AGG + chr8_2:48809928-48809947 Msa1252040:intron 25.0%
! AAGTACCTAATTAAGTTCAT+TGG - chr8_2:48810049-48810068 None:intergenic 25.0%
! ACTCAACTTGAAATAGTTTA+CGG + chr8_2:48810867-48810886 Msa1252040:CDS 25.0%
! AAACAGTTAATCTCAAAAGA+CGG - chr8_2:48811465-48811484 None:intergenic 25.0%
! TGAGATTAACTGTTTATTTG+TGG + chr8_2:48811470-48811489 Msa1252040:CDS 25.0%
! TGTTTATTTGTGGTGAAATT+TGG + chr8_2:48811480-48811499 Msa1252040:CDS 25.0%
GAAGAATATAAGTGAATGAG+TGG - chr8_2:48807857-48807876 None:intergenic 30.0%
ATATGAATGAAGAGAAAGAG+TGG - chr8_2:48807959-48807978 None:intergenic 30.0%
ACTCTTTCTCTTCATTCATA+TGG + chr8_2:48807958-48807977 Msa1252040:five_prime_UTR 30.0%
ATGAATTTGAATCACTCTTG+TGG + chr8_2:48808077-48808096 Msa1252040:CDS 30.0%
AGAAACTCTCTTAGAAACAA+AGG - chr8_2:48808194-48808213 None:intergenic 30.0%
AAGATGATAAGCTAGCAAAA+GGG - chr8_2:48808283-48808302 None:intergenic 30.0%
AAAGATGATAAGCTAGCAAA+AGG - chr8_2:48808284-48808303 None:intergenic 30.0%
CCTAAAGATGTCATAAACAA+AGG - chr8_2:48808485-48808504 None:intergenic 30.0%
! CCTTTGTTTATGACATCTTT+AGG + chr8_2:48808482-48808501 Msa1252040:CDS 30.0%
!! TTTATGACATCTTTAGGACA+AGG + chr8_2:48808488-48808507 Msa1252040:CDS 30.0%
! TCATATGGAACACTTTTGTT+TGG + chr8_2:48808536-48808555 Msa1252040:CDS 30.0%
TAATGATGTTGCAAATGCAA+TGG + chr8_2:48808586-48808605 Msa1252040:CDS 30.0%
AATGATGTTGCAAATGCAAT+GGG + chr8_2:48808587-48808606 Msa1252040:CDS 30.0%
! TCTTGTTGCTAATGTTTTTC+AGG + chr8_2:48808730-48808749 Msa1252040:CDS 30.0%
! CTTGTTGCTAATGTTTTTCA+GGG + chr8_2:48808731-48808750 Msa1252040:CDS 30.0%
!! TTGTTGCTAATGTTTTTCAG+GGG + chr8_2:48808732-48808751 Msa1252040:CDS 30.0%
GATAGTACTAAATTGCGAAA+CGG - chr8_2:48808837-48808856 None:intergenic 30.0%
GTCAACAAGATCTTATATTC+AGG - chr8_2:48808866-48808885 None:intergenic 30.0%
! AGATCTTGTTGACTAAATCA+CGG + chr8_2:48808873-48808892 Msa1252040:intron 30.0%
AAGTTTACCATTTATGAGAG+AGG + chr8_2:48808951-48808970 Msa1252040:intron 30.0%
! TGTTGGTTGCAAAAGTAATT+AGG + chr8_2:48808976-48808995 Msa1252040:intron 30.0%
!! TCAAGTTGAAAATTTGAAGG+GGG + chr8_2:48809024-48809043 Msa1252040:intron 30.0%
! TATGCTGAAGTTTTCAAATG+AGG + chr8_2:48809085-48809104 Msa1252040:intron 30.0%
GATATAGGAATCTAGTACTT+AGG + chr8_2:48809174-48809193 Msa1252040:intron 30.0%
AAAGTTTATCCAAAATCCGT+TGG - chr8_2:48809310-48809329 None:intergenic 30.0%
TCTTAACAAAAACCTTGGTT+AGG + chr8_2:48809446-48809465 Msa1252040:intron 30.0%
!! ATGTGTCATTTGTATGACAT+TGG + chr8_2:48809533-48809552 Msa1252040:intron 30.0%
!! TGTGTCATTTGTATGACATT+GGG + chr8_2:48809534-48809553 Msa1252040:intron 30.0%
! CAGCTTTTTATTGCTATAGT+TGG + chr8_2:48809685-48809704 Msa1252040:intron 30.0%
TTGCTATAGTTGGAAAGTAA+AGG + chr8_2:48809695-48809714 Msa1252040:intron 30.0%
ATACAATGTGTAGTAGATAC+TGG - chr8_2:48810112-48810131 None:intergenic 30.0%
ATCTACTACACATTGTATAG+TGG + chr8_2:48810114-48810133 Msa1252040:CDS 30.0%
TCTACTACACATTGTATAGT+GGG + chr8_2:48810115-48810134 Msa1252040:CDS 30.0%
TCGTATTGTTAACACATCAT+CGG - chr8_2:48810396-48810415 None:intergenic 30.0%
GTCAAATTCATCAAATGAAG+TGG + chr8_2:48810419-48810438 Msa1252040:intron 30.0%
AAACTATTATGAACTGACAG+TGG + chr8_2:48810466-48810485 Msa1252040:intron 30.0%
TTGGAAAAATCTTGCTAAGT+GGG - chr8_2:48810683-48810702 None:intergenic 30.0%
ATTGGAAAAATCTTGCTAAG+TGG - chr8_2:48810684-48810703 None:intergenic 30.0%
! AGAGAAGAAGCTTATGTTTT+GGG - chr8_2:48810826-48810845 None:intergenic 30.0%
! GAAATAGTTTACGGAGTTTT+CGG + chr8_2:48810876-48810895 Msa1252040:CDS 30.0%
TACAGAGTTATAGCTACAAT+TGG + chr8_2:48811092-48811111 Msa1252040:CDS 30.0%
TAGAACAGGTTATATGTATG+TGG + chr8_2:48811416-48811435 Msa1252040:intron 30.0%
AATTTAACATGGTGAACCTT+TGG + chr8_2:48811806-48811825 Msa1252040:intron 30.0%
TATTAGGCATAAGTATCAGT+CGG + chr8_2:48811872-48811891 Msa1252040:intron 30.0%
! TTTTTCACCTGCAGATTTTT+CGG - chr8_2:48811916-48811935 None:intergenic 30.0%
AAGAAAGAGTGGAAAGAATG+TGG - chr8_2:48807918-48807937 None:intergenic 35.0%
!! GTGAAAGAAGTGTGTGTTTT+TGG - chr8_2:48808017-48808036 None:intergenic 35.0%
! TTTGCTATGTTTGGTGAAAG+TGG - chr8_2:48808233-48808252 None:intergenic 35.0%
! AGCTTATCATCTTTTGCAGA+AGG + chr8_2:48808290-48808309 Msa1252040:CDS 35.0%
! GAGAATAACGATGAAGTATC+AGG + chr8_2:48808380-48808399 Msa1252040:CDS 35.0%
! TAACGATGAAGTATCAGGAA+TGG + chr8_2:48808385-48808404 Msa1252040:CDS 35.0%
TGTTTGGATTCTATATGGCT+TGG + chr8_2:48808552-48808571 Msa1252040:CDS 35.0%
! TTCTATATGGCTTGGAACAT+TGG + chr8_2:48808560-48808579 Msa1252040:CDS 35.0%
!!! AAGGATACTTTGCTTTTTGC+AGG + chr8_2:48808755-48808774 Msa1252040:CDS 35.0%
!!! AGGATACTTTGCTTTTTGCA+GGG + chr8_2:48808756-48808775 Msa1252040:CDS 35.0%
CAACAATCCTCTCTCATAAA+TGG - chr8_2:48808961-48808980 None:intergenic 35.0%
CATTTATGAGAGAGGATTGT+TGG + chr8_2:48808959-48808978 Msa1252040:intron 35.0%
! CAAGTTGAAAATTTGAAGGG+GGG + chr8_2:48809025-48809044 Msa1252040:intron 35.0%
TAAGAGTCTCACATTGGATA+AGG - chr8_2:48809224-48809243 None:intergenic 35.0%
CTAACACAACCTTACAAAAC+CGG + chr8_2:48809357-48809376 Msa1252040:intron 35.0%
AAAACCTTGGTTAGGAACAT+AGG + chr8_2:48809454-48809473 Msa1252040:intron 35.0%
!!! TTCCTTGTTTTCTTCTGCTA+GGG - chr8_2:48809483-48809502 None:intergenic 35.0%
!!! TTTCCTTGTTTTCTTCTGCT+AGG - chr8_2:48809484-48809503 None:intergenic 35.0%
!! GTGTCATTTGTATGACATTG+GGG + chr8_2:48809535-48809554 Msa1252040:intron 35.0%
GTGTCAGATATTAGTGTATG+CGG + chr8_2:48809582-48809601 Msa1252040:intron 35.0%
!!! CTGTTGTTTTGGAAACCTTT+TGG - chr8_2:48809721-48809740 None:intergenic 35.0%
AGTTTGCATCATACTATGGT+TGG + chr8_2:48810086-48810105 Msa1252040:intron 35.0%
!!! TGGATTTTTTCGCCACTATT+GGG + chr8_2:48810217-48810236 Msa1252040:CDS 35.0%
CGTATTGTTAACACATCATC+GGG - chr8_2:48810395-48810414 None:intergenic 35.0%
AGAACTATCCGTAAACAACT+CGG + chr8_2:48810756-48810775 Msa1252040:CDS 35.0%
CAAGTCAAATACTCCACATT+TGG + chr8_2:48810791-48810810 Msa1252040:CDS 35.0%
!! AGAAGAAGCTTATGTTTTGG+GGG - chr8_2:48810824-48810843 None:intergenic 35.0%
! GAGAAGAAGCTTATGTTTTG+GGG - chr8_2:48810825-48810844 None:intergenic 35.0%
! CAGAGAAGAAGCTTATGTTT+TGG - chr8_2:48810827-48810846 None:intergenic 35.0%
AGCTTCTTCTCTGATATTAC+AGG + chr8_2:48810834-48810853 Msa1252040:CDS 35.0%
TCTGATATTACAGGTCCAAA+GGG + chr8_2:48810843-48810862 Msa1252040:CDS 35.0%
!! ATTTCAAGTTGAGTACCCTT+TGG - chr8_2:48810861-48810880 None:intergenic 35.0%
! TGTTTCATGTCATTTGCTCA+CGG + chr8_2:48810921-48810940 Msa1252040:CDS 35.0%
TTGTAGAATAGCTAATGCAC+CGG - chr8_2:48810982-48811001 None:intergenic 35.0%
TTCTGTTTGCTTCGAAACTA+GGG + chr8_2:48811180-48811199 Msa1252040:CDS 35.0%
TGTTAGATCAGAAACAGTGA+AGG + chr8_2:48811274-48811293 Msa1252040:CDS 35.0%
TGAAATTTGGAGAAGAGGAT+CGG + chr8_2:48811493-48811512 Msa1252040:CDS 35.0%
!!! GGGATGAAATTTTTGGTGTT+TGG + chr8_2:48811519-48811538 Msa1252040:CDS 35.0%
TAGCAATCTTTGGACTTTGA+AGG + chr8_2:48811624-48811643 Msa1252040:intron 35.0%
CTGAAGAATCTTTCAACAGA+TGG - chr8_2:48811748-48811767 None:intergenic 35.0%
GTCTAGATCTTAAAAGCCAA+AGG - chr8_2:48811825-48811844 None:intergenic 35.0%
! TTTTCACCTGCAGATTTTTC+GGG - chr8_2:48811915-48811934 None:intergenic 35.0%
!! TGATGATGGTGAAGAAAGAG+TGG - chr8_2:48807929-48807948 None:intergenic 40.0%
TGAAGAGAAAGAGTGGAAGT+AGG - chr8_2:48807952-48807971 None:intergenic 40.0%
! ATGTTTGGTGAAAGTGGAAG+TGG - chr8_2:48808227-48808246 None:intergenic 40.0%
! ATCTTTTGCAGAAGGAGAAG+AGG + chr8_2:48808298-48808317 Msa1252040:CDS 40.0%
CAACATGCTGCAACAGAAAA+CGG + chr8_2:48808356-48808375 Msa1252040:CDS 40.0%
!! GACATCTTTAGGACAAGGTT+TGG + chr8_2:48808493-48808512 Msa1252040:CDS 40.0%
AATGCAATGGGAACTTCTGT+TGG + chr8_2:48808599-48808618 Msa1252040:CDS 40.0%
!!! TTTTCAGGGGCATTGTTGAT+GGG + chr8_2:48808674-48808693 Msa1252040:CDS 40.0%
TGTGACTAGTACAATGCAGA+AGG + chr8_2:48808703-48808722 Msa1252040:CDS 40.0%
GTGACTAGTACAATGCAGAA+GGG + chr8_2:48808704-48808723 Msa1252040:CDS 40.0%
!!! TGCTAATGTTTTTCAGGGGA+AGG + chr8_2:48808736-48808755 Msa1252040:CDS 40.0%
GTGTGTTAAGAGTCTCACAT+TGG - chr8_2:48809230-48809249 None:intergenic 40.0%
ACTTAGGACCTGATAGTAGA+TGG + chr8_2:48809283-48809302 Msa1252040:intron 40.0%
GGGACTCTTAACAAAAACCT+TGG + chr8_2:48809441-48809460 Msa1252040:intron 40.0%
TATTAGTGTATGCGGCTACA+TGG + chr8_2:48809590-48809609 Msa1252040:intron 40.0%
ATTAGTGTATGCGGCTACAT+GGG + chr8_2:48809591-48809610 Msa1252040:intron 40.0%
GTTGGAAAGTAAAGGCCAAA+AGG + chr8_2:48809703-48809722 Msa1252040:intron 40.0%
ACGCAGTTTGCATCATACTA+TGG + chr8_2:48810082-48810101 Msa1252040:intron 40.0%
! ACATTGTATAGTGGGAGCAA+TGG + chr8_2:48810123-48810142 Msa1252040:CDS 40.0%
! GTAGGGTTTGGTCTAGTTTA+TGG + chr8_2:48810145-48810164 Msa1252040:CDS 40.0%
TAGCAAGAGTGATTTCTTCG+TGG + chr8_2:48810197-48810216 Msa1252040:CDS 40.0%
!!! GTGGATTTTTTCGCCACTAT+TGG + chr8_2:48810216-48810235 Msa1252040:CDS 40.0%
TTGTCTACAAATGCATCCGA+AGG + chr8_2:48810257-48810276 Msa1252040:CDS 40.0%
TGTCTACAAATGCATCCGAA+GGG + chr8_2:48810258-48810277 Msa1252040:CDS 40.0%
TGCATGGGGGAAAATATTAG+GGG - chr8_2:48810564-48810583 None:intergenic 40.0%
CTGCATGGGGGAAAATATTA+GGG - chr8_2:48810565-48810584 None:intergenic 40.0%
ACTGCATGGGGGAAAATATT+AGG - chr8_2:48810566-48810585 None:intergenic 40.0%
ACTGTATACAAACTGCATGG+GGG - chr8_2:48810577-48810596 None:intergenic 40.0%
CACTGTATACAAACTGCATG+GGG - chr8_2:48810578-48810597 None:intergenic 40.0%
GCACTGTATACAAACTGCAT+GGG - chr8_2:48810579-48810598 None:intergenic 40.0%
TGCACTGTATACAAACTGCA+TGG - chr8_2:48810580-48810599 None:intergenic 40.0%
GCACCAATTGCTGTATTTCT+CGG + chr8_2:48810630-48810649 Msa1252040:CDS 40.0%
!!! TTTTCCAATAGCTCTAAGCC+AGG + chr8_2:48810695-48810714 Msa1252040:CDS 40.0%
GAAGATGTCCGAGTTGTTTA+CGG - chr8_2:48810767-48810786 None:intergenic 40.0%
CTCTGATATTACAGGTCCAA+AGG + chr8_2:48810842-48810861 Msa1252040:CDS 40.0%
GGTGCATTAGCTATTCTACA+AGG + chr8_2:48810981-48811000 Msa1252040:CDS 40.0%
TTCCGATTGATGTTCTTGCT+TGG + chr8_2:48811030-48811049 Msa1252040:CDS 40.0%
TCCGATTGATGTTCTTGCTT+GGG + chr8_2:48811031-48811050 Msa1252040:CDS 40.0%
GTTCTGTTTGCTTCGAAACT+AGG + chr8_2:48811179-48811198 Msa1252040:CDS 40.0%
! TACACTAGTTGGTGCAGTAA+TGG + chr8_2:48811223-48811242 Msa1252040:CDS 40.0%
! ACACTAGTTGGTGCAGTAAT+GGG + chr8_2:48811224-48811243 Msa1252040:CDS 40.0%
TGAAGGAGATTTGTGCTTCA+TGG + chr8_2:48811291-48811310 Msa1252040:CDS 40.0%
GAAGGAGATTTGTGCTTCAT+GGG + chr8_2:48811292-48811311 Msa1252040:CDS 40.0%
TGTGGTGAAATTTGGAGAAG+AGG + chr8_2:48811488-48811507 Msa1252040:CDS 40.0%
! TCGGCAAGGGATGAAATTTT+TGG + chr8_2:48811512-48811531 Msa1252040:CDS 40.0%
TGGTTTCTATGTGAAGACTG+TGG + chr8_2:48811539-48811558 Msa1252040:CDS 40.0%
!!! GGCTTTTAAGATCTAGACAG+TGG + chr8_2:48811827-48811846 Msa1252040:intron 40.0%
! TTTCACCTGCAGATTTTTCG+GGG - chr8_2:48811914-48811933 None:intergenic 40.0%
AATCTGCAGGTGAAAAACTC+CGG + chr8_2:48811919-48811938 Msa1252040:CDS 40.0%
AGAGTGGAAGTAGGTGATGA+TGG - chr8_2:48807943-48807962 None:intergenic 45.0%
AAAGTGGAAGTGGCTTCACA+TGG - chr8_2:48808217-48808236 None:intergenic 45.0%
! CGTTTTCTGTTGCAGCATGT+TGG - chr8_2:48808358-48808377 None:intergenic 45.0%
ATGGGAACTTCTGTTGGATC+TGG + chr8_2:48808605-48808624 Msa1252040:CDS 45.0%
! GATCTGGTGCATTGTCACTT+AGG + chr8_2:48808621-48808640 Msa1252040:CDS 45.0%
!! CTGCAGTGTTGGAGTTTTCA+GGG + chr8_2:48808660-48808679 Msa1252040:CDS 45.0%
!! TGCAGTGTTGGAGTTTTCAG+GGG + chr8_2:48808661-48808680 Msa1252040:CDS 45.0%
!!! GTTTTCAGGGGCATTGTTGA+TGG + chr8_2:48808673-48808692 Msa1252040:CDS 45.0%
TTGAAGGGGGGCTTAGAAAA+AGG + chr8_2:48809037-48809056 Msa1252040:intron 45.0%
TGAAGGGGGGCTTAGAAAAA+GGG + chr8_2:48809038-48809057 Msa1252040:intron 45.0%
!! CTGATAGCGGTGACTAACTT+AGG + chr8_2:48809267-48809286 Msa1252040:intron 45.0%
CCTGATAGTAGATGGTCCAA+CGG + chr8_2:48809291-48809310 Msa1252040:intron 45.0%
!! GTAGATGGTCCAACGGATTT+TGG + chr8_2:48809298-48809317 Msa1252040:intron 45.0%
GTAATAATCACCTCGCTAGC+CGG - chr8_2:48809379-48809398 None:intergenic 45.0%
AGAACATAGCTCTTGCAACG+TGG + chr8_2:48809420-48809439 Msa1252040:intron 45.0%
GAACATAGCTCTTGCAACGT+GGG + chr8_2:48809421-48809440 Msa1252040:intron 45.0%
GAGTCCTATGTTCCTAACCA+AGG - chr8_2:48809461-48809480 None:intergenic 45.0%
CTCCCTAGCAGAAGAAAACA+AGG + chr8_2:48809478-48809497 Msa1252040:intron 45.0%
! TGTATAGTGGGAGCAATGGT+AGG + chr8_2:48810127-48810146 Msa1252040:CDS 45.0%
! GTATAGTGGGAGCAATGGTA+GGG + chr8_2:48810128-48810147 Msa1252040:CDS 45.0%
! GGGTTTGGTCTAGTTTATGG+AGG + chr8_2:48810148-48810167 Msa1252040:CDS 45.0%
! AGGAGCTGGAGCTGTATTTT+GGG + chr8_2:48810168-48810187 Msa1252040:CDS 45.0%
GCATTAACGAGCTTACCCTT+CGG - chr8_2:48810276-48810295 None:intergenic 45.0%
GTATACAGTGCAAGTAACCC+AGG + chr8_2:48810588-48810607 Msa1252040:CDS 45.0%
ACGCCGAGAAATACAGCAAT+TGG - chr8_2:48810636-48810655 None:intergenic 45.0%
AATGCCTGGCTTAGAGCTAT+TGG - chr8_2:48810702-48810721 None:intergenic 45.0%
! TACGGATAGTTCTGTTGACC+AGG - chr8_2:48810749-48810768 None:intergenic 45.0%
!!! AAGCTTATGTTTTGGGGGAC+GGG - chr8_2:48810819-48810838 None:intergenic 45.0%
!!! GAAGCTTATGTTTTGGGGGA+CGG - chr8_2:48810820-48810839 None:intergenic 45.0%
! CGGAGTTTTCGGTTATATGC+AGG + chr8_2:48810887-48810906 Msa1252040:CDS 45.0%
! TTCATGTCATTTGCTCACGG+TGG + chr8_2:48810924-48810943 Msa1252040:CDS 45.0%
AACGATGTCTCCAACGCAAT+AGG + chr8_2:48810948-48810967 Msa1252040:CDS 45.0%
ATTCTACAAGGCGCAGCAAA+AGG + chr8_2:48810993-48811012 Msa1252040:CDS 45.0%
CCCCAAGCAAGAACATCAAT+CGG - chr8_2:48811035-48811054 None:intergenic 45.0%
CCGATTGATGTTCTTGCTTG+GGG + chr8_2:48811032-48811051 Msa1252040:CDS 45.0%
ATTGATGTTCTTGCTTGGGG+TGG + chr8_2:48811035-48811054 Msa1252040:CDS 45.0%
! GTGGATTTGGAATCGTTGCA+GGG + chr8_2:48811054-48811073 Msa1252040:CDS 45.0%
GAAACTAGGGCTACCGATAT+CGG + chr8_2:48811193-48811212 Msa1252040:CDS 45.0%
AAACTAGGGCTACCGATATC+GGG + chr8_2:48811194-48811213 Msa1252040:CDS 45.0%
AGTGTATGTGTCCCCGATAT+CGG - chr8_2:48811209-48811228 None:intergenic 45.0%
TTCATGGGCGGTTACTATTC+CGG + chr8_2:48811307-48811326 Msa1252040:CDS 45.0%
CCACGTGTAAATCACCGATA+AGG - chr8_2:48811342-48811361 None:intergenic 45.0%
CCTTATCGGTGATTTACACG+TGG + chr8_2:48811339-48811358 Msa1252040:intron 45.0%
!!! AGATTTTTCGGGGGCAGTTT+CGG - chr8_2:48811904-48811923 None:intergenic 45.0%
!! TTCACCTGCAGATTTTTCGG+GGG - chr8_2:48811913-48811932 None:intergenic 45.0%
AAACCGATGCTCCAAAAGGT+CGG - chr8_2:48811952-48811971 None:intergenic 45.0%
!!! TATATGATTATATTTTTATT+AGG + chr8_2:48811856-48811875 Msa1252040:intron 5.0%
GTGGTGCATGAAGCTTCTTG+AGG - chr8_2:48807838-48807857 None:intergenic 50.0%
! TGTGTTGACAGCTGCAGTGT+TGG + chr8_2:48808649-48808668 Msa1252040:CDS 50.0%
!! GCTGCAGTGTTGGAGTTTTC+AGG + chr8_2:48808659-48808678 Msa1252040:CDS 50.0%
! CTTTCTTCACTTGCTGCTGC+TGG + chr8_2:48808782-48808801 Msa1252040:CDS 50.0%
TGCTGCTGGTACTTGGTTAC+AGG + chr8_2:48808796-48808815 Msa1252040:CDS 50.0%
ATCAGTCTTGAGCGTGAGGA+GGG - chr8_2:48809252-48809271 None:intergenic 50.0%
TATCAGTCTTGAGCGTGAGG+AGG - chr8_2:48809253-48809272 None:intergenic 50.0%
CTCACGCTCAAGACTGATAG+CGG + chr8_2:48809254-48809273 Msa1252040:intron 50.0%
CCGTTGGACCATCTACTATC+AGG - chr8_2:48809294-48809313 None:intergenic 50.0%
! GGTCTAGTTTATGGAGGAGC+TGG + chr8_2:48810154-48810173 Msa1252040:CDS 50.0%
! GAGGAGCTGGAGCTGTATTT+TGG + chr8_2:48810167-48810186 Msa1252040:CDS 50.0%
! GGAGCTGGAGCTGTATTTTG+GGG + chr8_2:48810169-48810188 Msa1252040:CDS 50.0%
GATACTGCTGCTCCCAATAG+TGG - chr8_2:48810232-48810251 None:intergenic 50.0%
GCTGTATTTCTCGGCGTAAC+TGG + chr8_2:48810639-48810658 Msa1252040:CDS 50.0%
GCTAAGTGGGAAAGCAGCAA+AGG - chr8_2:48810670-48810689 None:intergenic 50.0%
! CTAAGCCAGGCATTAGCTTG+TGG + chr8_2:48810708-48810727 Msa1252040:CDS 50.0%
!! GCATTAGCTTGTGGAACCGT+CGG + chr8_2:48810717-48810736 Msa1252040:CDS 50.0%
!! CATTAGCTTGTGGAACCGTC+GGG + chr8_2:48810718-48810737 Msa1252040:CDS 50.0%
!! ATTAGCTTGTGGAACCGTCG+GGG + chr8_2:48810719-48810738 Msa1252040:CDS 50.0%
CTCCAACGCAATAGGTCCAT+TGG + chr8_2:48810956-48810975 Msa1252040:CDS 50.0%
AACGCAATAGGTCCATTGGC+CGG + chr8_2:48810960-48810979 Msa1252040:CDS 50.0%
! ATAGCTAATGCACCGGCCAA+TGG - chr8_2:48810975-48810994 None:intergenic 50.0%
! GTTCTTGCTTGGGGTGGATT+TGG + chr8_2:48811041-48811060 Msa1252040:CDS 50.0%
! GGTGGATTTGGAATCGTTGC+AGG + chr8_2:48811053-48811072 Msa1252040:CDS 50.0%
TCGTTGCAGGGCTAATGATG+TGG + chr8_2:48811066-48811085 Msa1252040:CDS 50.0%
CGTTGCAGGGCTAATGATGT+GGG + chr8_2:48811067-48811086 Msa1252040:CDS 50.0%
GTTGCAGGGCTAATGATGTG+GGG + chr8_2:48811068-48811087 Msa1252040:CDS 50.0%
ACGGAACTTACACCGACAAG+AGG + chr8_2:48811125-48811144 Msa1252040:CDS 50.0%
TCGGCTGCAAATCCTCTTGT+CGG - chr8_2:48811140-48811159 None:intergenic 50.0%
AGGATTTGCAGCCGAGTTTG+CGG + chr8_2:48811145-48811164 Msa1252040:CDS 50.0%
AACTAGGGCTACCGATATCG+GGG + chr8_2:48811195-48811214 Msa1252040:CDS 50.0%
TCGGGGACACATACACTAGT+TGG + chr8_2:48811212-48811231 Msa1252040:CDS 50.0%
! GTTGGTGCAGTAATGGGAGT+TGG + chr8_2:48811230-48811249 Msa1252040:CDS 50.0%
GGAGATTTGTGCTTCATGGG+CGG + chr8_2:48811295-48811314 Msa1252040:CDS 50.0%
!! TCCGGTTGGTGCTACCTTAT+CGG + chr8_2:48811325-48811344 Msa1252040:intron 50.0%
ACCGATAAGGTAGCACCAAC+CGG - chr8_2:48811329-48811348 None:intergenic 50.0%
TTTGGAGAAGAGGATCGGCA+AGG + chr8_2:48811498-48811517 Msa1252040:CDS 50.0%
TTGGAGAAGAGGATCGGCAA+GGG + chr8_2:48811499-48811518 Msa1252040:CDS 50.0%
!!! GATTTTTCGGGGGCAGTTTC+GGG - chr8_2:48811903-48811922 None:intergenic 50.0%
TGCTCCAAAAGGTCGGACAT+GGG - chr8_2:48811945-48811964 None:intergenic 50.0%
ATGCTCCAAAAGGTCGGACA+TGG - chr8_2:48811946-48811965 None:intergenic 50.0%
!!! TGTCCGACCTTTTGGAGCAT+CGG + chr8_2:48811946-48811965 Msa1252040:CDS 50.0%
! CACTTGCTGCTGCTGGTACT+TGG + chr8_2:48808789-48808808 Msa1252040:CDS 55.0%
CGCTATCAGTCTTGAGCGTG+AGG - chr8_2:48809256-48809275 None:intergenic 55.0%
!! CCTCGCTAGCCGGTTTTGTA+AGG - chr8_2:48809369-48809388 None:intergenic 55.0%
CCTTACAAAACCGGCTAGCG+AGG + chr8_2:48809366-48809385 Msa1252040:intron 55.0%
GTGGGAGCAATGGTAGGGTT+TGG + chr8_2:48810133-48810152 Msa1252040:CDS 55.0%
CGGTTCCACAAGCTAATGCC+TGG - chr8_2:48810716-48810735 None:intergenic 55.0%
GGCCAATGGACCTATTGCGT+TGG - chr8_2:48810961-48810980 None:intergenic 55.0%
CGAAGCAAACAGAACCACCG+AGG - chr8_2:48811174-48811193 None:intergenic 55.0%
ATGGGAGTTGGATTCGCGAG+AGG + chr8_2:48811242-48811261 Msa1252040:CDS 55.0%
TGGGCGGTTACTATTCCGGT+TGG + chr8_2:48811311-48811330 Msa1252040:CDS 55.0%
ACTGCCCCCGAAAAATCTGC+AGG + chr8_2:48811906-48811925 Msa1252040:CDS 55.0%
! CTGCAGCTGCTGCTTGTCCT+GGG - chr8_2:48810608-48810627 None:intergenic 60.0%
GTTGACCAGGAAAGCCCCGA+CGG - chr8_2:48810736-48810755 None:intergenic 60.0%
! TGGGGGACGGGTTCCAAATG+TGG - chr8_2:48810807-48810826 None:intergenic 60.0%
CCAAAAGGTCGGACATGGGC+CGG - chr8_2:48811941-48811960 None:intergenic 60.0%
! GCTGCAGCTGCTGCTTGTCC+TGG - chr8_2:48810609-48810628 None:intergenic 65.0%
TGGAACCGTCGGGGCTTTCC+TGG + chr8_2:48810728-48810747 Msa1252040:CDS 65.0%
AGCCGAGTTTGCGGCTGCCT+CGG + chr8_2:48811154-48811173 Msa1252040:CDS 65.0%
CACCGAGGCAGCCGCAAACT+CGG - chr8_2:48811159-48811178 None:intergenic 65.0%
! CCGGCCCATGTCCGACCTTT+TGG + chr8_2:48811938-48811957 Msa1252040:CDS 65.0%
CGAGTTTGCGGCTGCCTCGG+TGG + chr8_2:48811157-48811176 Msa1252040:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 48807755 48811974 48807755 ID=Msa1252040;Name=Msa1252040
chr8_2 mRNA 48807755 48811974 48807755 ID=Msa1252040-mRNA-1;Parent=Msa1252040;Name=Msa1252040-mRNA-1;_AED=0.10;_eAED=0.10;_QI=322|0.5|0.4|0.8|1|1|5|0|636
chr8_2 exon 48807755 48808817 48807755 ID=Msa1252040-mRNA-1:exon:14709;Parent=Msa1252040-mRNA-1
chr8_2 exon 48810088 48810279 48810088 ID=Msa1252040-mRNA-1:exon:14710;Parent=Msa1252040-mRNA-1
chr8_2 exon 48810585 48811332 48810585 ID=Msa1252040-mRNA-1:exon:14711;Parent=Msa1252040-mRNA-1
chr8_2 exon 48811460 48811592 48811460 ID=Msa1252040-mRNA-1:exon:14712;Parent=Msa1252040-mRNA-1
chr8_2 exon 48811878 48811974 48811878 ID=Msa1252040-mRNA-1:exon:14713;Parent=Msa1252040-mRNA-1
chr8_2 five_prime_UTR 48807755 48808076 48807755 ID=Msa1252040-mRNA-1:five_prime_utr;Parent=Msa1252040-mRNA-1
chr8_2 CDS 48808077 48808817 48808077 ID=Msa1252040-mRNA-1:cds;Parent=Msa1252040-mRNA-1
chr8_2 CDS 48810088 48810279 48810088 ID=Msa1252040-mRNA-1:cds;Parent=Msa1252040-mRNA-1
chr8_2 CDS 48810585 48811332 48810585 ID=Msa1252040-mRNA-1:cds;Parent=Msa1252040-mRNA-1
chr8_2 CDS 48811460 48811592 48811460 ID=Msa1252040-mRNA-1:cds;Parent=Msa1252040-mRNA-1
chr8_2 CDS 48811878 48811974 48811878 ID=Msa1252040-mRNA-1:cds;Parent=Msa1252040-mRNA-1
Gene Sequence

>Msa1252040

ATGAATTTGAATCACTCTTGTGGTTTTTCTTTAACCAAACATACAAAAAAAACATCATTAACTTCTTCTATTTTCCATAGAAACTCTCATATATTTCTCTCTAGAAACACTTCACCTTTGTTTCTAAGAGAGTTTCTCCATGTGAAGCCACTTCCACTTTCACCAAACATAGCAAAAAGTTTGAAAAACTGTAAACTCAAACACCCTTTTGCTAGCTTATCATCTTTTGCAGAAGGAGAAGAGGATTCAAAAGAAGAAATTCAGCACAATGAACATCACCAACATGCTGCAACAGAAAACGGAGAGAATAACGATGAAGTATCAGGAATGGCTAAAGCATTTCACATATCATCAAGAACAGCTTCTGCTATAACAATATGTATAGTAATGGCTGCACTTGTTTTTCCTTTGTTTATGACATCTTTAGGACAAGGTTTGGCATTGAAGACAAAGATGTTATCATATGGAACACTTTTGTTTGGATTCTATATGGCTTGGAACATTGGTGCTAATGATGTTGCAAATGCAATGGGAACTTCTGTTGGATCTGGTGCATTGTCACTTAGGCAAGCTGTGTTGACAGCTGCAGTGTTGGAGTTTTCAGGGGCATTGTTGATGGGAACTCATGTGACTAGTACAATGCAGAAGGGAATTCTTGTTGCTAATGTTTTTCAGGGGAAGGATACTTTGCTTTTTGCAGGGTTGCTTTCTTCACTTGCTGCTGCTGGTACTTGGTTACAGTTTGCATCATACTATGGTTGGCCAGTATCTACTACACATTGTATAGTGGGAGCAATGGTAGGGTTTGGTCTAGTTTATGGAGGAGCTGGAGCTGTATTTTGGGGTTCACTAGCAAGAGTGATTTCTTCGTGGATTTTTTCGCCACTATTGGGAGCAGCAGTATCGTTTATTGTCTACAAATGCATCCGAAGGTTTGTATACAGTGCAAGTAACCCAGGACAAGCAGCAGCTGCAGCAGCACCAATTGCTGTATTTCTCGGCGTAACTGGAATTTCCTTTGCTGCTTTCCCACTTAGCAAGATTTTTCCAATAGCTCTAAGCCAGGCATTAGCTTGTGGAACCGTCGGGGCTTTCCTGGTCAACAGAACTATCCGTAAACAACTCGGACATCTTCTAGACAAGTCAAATACTCCACATTTGGAACCCGTCCCCCAAAACATAAGCTTCTTCTCTGATATTACAGGTCCAAAGGGTACTCAACTTGAAATAGTTTACGGAGTTTTCGGTTATATGCAGGTTTTATCAGCGTGTTTCATGTCATTTGCTCACGGTGGAAACGATGTCTCCAACGCAATAGGTCCATTGGCCGGTGCATTAGCTATTCTACAAGGCGCAGCAAAAGGAGCTGATATAGTTATTCCGATTGATGTTCTTGCTTGGGGTGGATTTGGAATCGTTGCAGGGCTAATGATGTGGGGTTACAGAGTTATAGCTACAATTGGAAAGAAAATAACGGAACTTACACCGACAAGAGGATTTGCAGCCGAGTTTGCGGCTGCCTCGGTGGTTCTGTTTGCTTCGAAACTAGGGCTACCGATATCGGGGACACATACACTAGTTGGTGCAGTAATGGGAGTTGGATTCGCGAGAGGATTTAACAATGTTAGATCAGAAACAGTGAAGGAGATTTGTGCTTCATGGGCGGTTACTATTCCGGTTGCGCCGTCTTTTGAGATTAACTGTTTATTTGTGGTGAAATTTGGAGAAGAGGATCGGCAAGGGATGAAATTTTTGGTGTTTGGTTTCTATGTGAAGACTGTGGTTGCAGAAGAGACTGATGAAATTGCAGACATGCATAAGTATCAGTCGGTTTTGCCCGAAACTGCCCCCGAAAAATCTGCAGGTGAAAAACTCCGGCCCATGTCCGACCTTTTGGAGCATCGGTTTTAG

Protein sequence

>Msa1252040

MNLNHSCGFSLTKHTKKTSLTSSIFHRNSHIFLSRNTSPLFLREFLHVKPLPLSPNIAKSLKNCKLKHPFASLSSFAEGEEDSKEEIQHNEHHQHAATENGENNDEVSGMAKAFHISSRTASAITICIVMAALVFPLFMTSLGQGLALKTKMLSYGTLLFGFYMAWNIGANDVANAMGTSVGSGALSLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVANVFQGKDTLLFAGLLSSLAAAGTWLQFASYYGWPVSTTHCIVGAMVGFGLVYGGAGAVFWGSLARVISSWIFSPLLGAAVSFIVYKCIRRFVYSASNPGQAAAAAAPIAVFLGVTGISFAAFPLSKIFPIALSQALACGTVGAFLVNRTIRKQLGHLLDKSNTPHLEPVPQNISFFSDITGPKGTQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGAAKGADIVIPIDVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISGTHTLVGAVMGVGFARGFNNVRSETVKEICASWAVTIPVAPSFEINCLFVVKFGEEDRQGMKFLVFGFYVKTVVAEETDEIADMHKYQSVLPETAPEKSAGEKLRPMSDLLEHRF*