AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264230 MtrunA17_Chr4g0074171 98.790 496 6 0 1 496 1 496 0.0 1009
Msa1264230 MtrunA17_Chr1g0149961 89.919 496 50 0 1 496 1 496 0.0 938
Msa1264230 MtrunA17_Chr2g0310091 31.130 469 306 7 22 482 68 527 7.02e-72 237
Msa1264230 MtrunA17_Chr3g0118081 34.820 471 280 10 17 469 39 500 1.94e-62 212
Msa1264230 MtrunA17_Chr3g0118121 33.898 472 283 11 17 469 9 470 7.28e-61 207
Msa1264230 MtrunA17_Chr8g0365221 31.352 488 307 10 21 493 66 540 9.18e-61 208
Msa1264230 MtrunA17_Chr8g0390631 28.958 480 321 9 17 485 15 485 5.00e-57 197
Msa1264230 MtrunA17_Chr4g0059521 31.838 468 298 9 17 469 9 470 1.13e-55 193
Msa1264230 MtrunA17_Chr8g0390651 27.835 485 320 8 17 485 24 494 2.28e-55 192
Msa1264230 MtrunA17_Chr3g0117861 29.508 488 316 11 21 493 67 541 4.33e-53 187
Msa1264230 MtrunA17_Chr4g0059221 28.571 497 317 10 17 493 65 543 9.68e-53 186
Msa1264230 MtrunA17_Chr6g0485311 29.363 487 321 10 17 489 21 498 1.15e-52 185
Msa1264230 MtrunA17_Chr6g0485301 28.689 488 312 10 17 485 23 493 4.84e-52 184
Msa1264230 MtrunA17_Chr2g0294411 29.314 481 302 13 29 485 62 528 2.30e-47 173
Msa1264230 MtrunA17_Chr2g0279751 29.339 484 310 12 22 487 21 490 1.54e-46 169
Msa1264230 MtrunA17_Chr4g0049641 27.673 477 319 10 22 483 48 513 2.53e-44 163
Msa1264230 MtrunA17_Chr2g0300801 24.280 486 342 14 19 490 25 498 2.83e-31 126
Msa1264230 MtrunA17_Chr2g0328781 26.966 445 281 15 44 467 14 435 5.71e-27 114
Msa1264230 MtrunA17_Chr3g0124811 25.764 458 313 12 39 485 7 448 4.73e-26 110
Msa1264230 MtrunA17_Chr8g0384741 26.107 429 282 13 53 467 74 481 1.17e-25 110
Msa1264230 MtrunA17_Chr8g0372381 26.118 425 287 11 53 467 14 421 3.61e-23 102
Msa1264230 MtrunA17_Chr1g0159811 25.231 432 296 11 41 461 7 422 1.21e-22 100
Msa1264230 MtrunA17_Chr4g0032441 28.618 304 196 11 158 448 105 400 2.06e-16 81.6
Msa1264230 MtrunA17_Chr4g0060261 25.070 355 232 13 22 360 57 393 3.00e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264230 AT2G24270.4 89.718 496 51 0 1 496 1 496 0.0 940
Msa1264230 AT2G24270.2 89.718 496 51 0 1 496 41 536 0.0 940
Msa1264230 AT2G24270.3 89.718 496 51 0 1 496 1 496 0.0 939
Msa1264230 AT2G24270.1 89.718 496 51 0 1 496 1 496 0.0 939
Msa1264230 AT1G74920.1 34.783 483 284 12 17 477 9 482 5.11e-69 229
Msa1264230 AT1G74920.2 34.576 483 280 13 17 477 9 477 5.44e-67 224
Msa1264230 AT1G79440.1 31.130 469 306 6 22 482 59 518 4.72e-66 222
Msa1264230 AT3G48170.1 30.913 482 304 12 17 477 9 482 3.06e-61 209
Msa1264230 AT3G48000.1 30.426 493 305 11 21 493 63 537 1.27e-58 202
Msa1264230 AT1G23800.1 30.642 483 315 9 22 493 60 533 2.44e-58 202
Msa1264230 AT3G24503.1 28.778 483 325 8 17 488 21 495 2.97e-54 190
Msa1264230 AT3G66658.1 29.221 462 299 12 25 467 58 510 2.30e-46 170
Msa1264230 AT3G66658.2 29.122 467 293 13 25 467 58 510 3.69e-46 170
Msa1264230 AT2G14170.2 28.512 477 315 11 22 483 11 476 2.00e-43 160
Msa1264230 AT2G14170.3 28.692 474 314 10 22 482 120 582 1.34e-42 160
Msa1264230 AT2G14170.1 28.512 477 315 11 22 483 120 585 1.55e-42 160
Msa1264230 AT1G23800.2 30.696 316 204 6 22 330 60 367 2.75e-34 134
Msa1264230 AT1G54100.2 24.898 490 328 13 19 487 24 494 3.71e-34 135
Msa1264230 AT1G54100.1 24.898 490 328 13 19 487 24 494 3.71e-34 135
Msa1264230 AT1G44170.1 25.352 426 301 12 51 468 9 425 3.00e-25 108
Msa1264230 AT1G44170.2 25.352 426 301 12 51 468 9 425 3.00e-25 108
Msa1264230 AT1G44170.3 26.814 317 223 7 158 468 49 362 6.15e-25 107
Msa1264230 AT4G34240.4 24.362 431 289 11 53 468 65 473 7.81e-23 102
Msa1264230 AT4G34240.1 24.362 431 289 11 53 468 80 488 8.02e-23 102
Msa1264230 AT4G34240.3 26.814 317 223 6 158 468 33 346 5.78e-21 95.5
Msa1264230 AT4G36250.1 27.245 323 215 10 158 467 108 423 1.29e-20 95.1
Msa1264230 AT5G62530.1 23.932 351 233 15 19 353 56 388 1.87e-14 76.3
Msa1264230 AT4G34240.2 24.127 315 204 9 53 354 80 372 4.16e-14 74.3

Find 158 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTGAAATTCAATTTATT+TGG 0.121577 8_2:-67635690 None:intergenic
TCCCTTCTCTCTTGTATTCT+TGG 0.177591 8_2:-67634233 None:intergenic
TTAGCAAACGCAACTCTTAA+AGG 0.191611 8_2:+67630548 Msa1264230:five_prime_UTR
CACCAAGCCTTCAATGAAAT+TGG 0.219619 8_2:-67634178 None:intergenic
CTTGGAAGTGAGGCAATATT+TGG 0.238356 8_2:-67632298 None:intergenic
GTTGCTGCAAACATTATAAA+AGG 0.248305 8_2:+67633534 Msa1264230:CDS
TCTCATTTGGCCTTTGCTAT+TGG 0.249553 8_2:+67634257 Msa1264230:CDS
CTCCCAAGAGGAAGTTAATA+AGG 0.272304 8_2:+67631895 Msa1264230:CDS
CACCTTATACAGTTCACTTC+TGG 0.297696 8_2:-67633317 None:intergenic
GGTCTAATCAGCTGTGTTAC+TGG 0.308486 8_2:+67633257 Msa1264230:CDS
TGCTAGCAACTTTGGACTTC+AGG 0.313262 8_2:+67634383 Msa1264230:CDS
GGGACAAACTAGAATTGTTT+TGG 0.315561 8_2:-67630650 None:intergenic
AATGATCTGGCCCACGGGCT+GGG 0.316466 8_2:-67635064 None:intergenic
TATTGAGGCTTTCTTGTAGT+AGG 0.325145 8_2:-67630964 None:intergenic
ACAGAATTGATCCTAATTAC+AGG 0.326513 8_2:-67634336 None:intergenic
AAATGATCTGGCCCACGGGC+TGG 0.326624 8_2:-67635065 None:intergenic
GATTCCGTTACAAATGGAAT+TGG 0.329253 8_2:+67633464 Msa1264230:CDS
GGTATAAAAGACAGTGGAAT+TGG 0.332029 8_2:+67635323 Msa1264230:CDS
TATTTGGTCCTTTCATTTCC+CGG 0.335147 8_2:-67632282 None:intergenic
TGTCAGCTCACTATGACTTA+TGG 0.335489 8_2:-67635491 None:intergenic
TCTGGTTAATATAGTTGATT+TGG 0.336291 8_2:-67630759 None:intergenic
AAGAGAGTAGGAGGAGTGTC+TGG 0.336650 8_2:-67630777 None:intergenic
CTTTGCTATTGGATAATGTT+AGG 0.338290 8_2:+67634268 Msa1264230:CDS
TTGCAGCTTTGTGTTCTTTG+AGG 0.338729 8_2:-67632006 None:intergenic
ATTGCTCCTGCACTCATTGC+TGG 0.338801 8_2:+67632690 Msa1264230:CDS
GAAGAAGGAGTAAGGATTCT+TGG 0.343223 8_2:+67632228 Msa1264230:CDS
TCTTGGAGAGGGAAAGTTCT+TGG 0.345028 8_2:+67632245 Msa1264230:CDS
GTTCATTGCTTTCACTTGGC+TGG 0.348410 8_2:+67633224 Msa1264230:CDS
AGAGGAAGTTAATAAGGTTA+TGG 0.352924 8_2:+67631901 Msa1264230:CDS
TGAAGATGCTGACCTTGATT+TGG 0.358975 8_2:+67633512 Msa1264230:CDS
AACACAGCTGATTAGACCTT+TGG 0.359110 8_2:-67633252 None:intergenic
CATTGTAATGCTAGCAACTT+TGG 0.359882 8_2:+67634375 Msa1264230:CDS
ATCCTAATTACAGGCAAAAC+TGG 0.370576 8_2:-67634327 None:intergenic
GGAATCAGTCGCTGATAGTT+TGG 0.370635 8_2:+67634065 Msa1264230:CDS
TCCCATGCAATTCTCATGTC+TGG 0.371621 8_2:-67634291 None:intergenic
TGAGTGTCAATCAATATTTA+TGG 0.374398 8_2:-67630716 None:intergenic
CATGGTTCATTGCTTTCACT+TGG 0.375400 8_2:+67633220 Msa1264230:CDS
ATCCAGAAGTGAACTGTATA+AGG 0.377796 8_2:+67633315 Msa1264230:CDS
AGATTGACTGGATAGTTAAA+AGG 0.381527 8_2:-67632654 None:intergenic
GACAAAGATGAGACGATAGA+AGG 0.386574 8_2:-67635746 None:intergenic
AGCCAATTTCATTGAAGGCT+TGG 0.386673 8_2:+67634176 Msa1264230:CDS
TTTGTCAAGCACATCGTGTT+AGG 0.393933 8_2:+67635763 Msa1264230:three_prime_UTR
ATTAGTGATGCAATGGAATC+AGG 0.394652 8_2:+67635020 Msa1264230:CDS
ATGGCTAAGATCACTCCTAA+TGG 0.394955 8_2:-67632627 None:intergenic
TTTATAAGTTTCACCTGAAA+GGG 0.396189 8_2:-67635089 None:intergenic
TAACCTTATTAACTTCCTCT+TGG 0.406814 8_2:-67631898 None:intergenic
TCATCAGCCAATTTCATTGA+AGG 0.421085 8_2:+67634171 Msa1264230:CDS
GGTTGTAAGATCTGGTGATT+TGG 0.422138 8_2:+67632191 Msa1264230:intron
TACTGCTGTTAAGGTTGTCT+TGG 0.427731 8_2:+67634038 Msa1264230:CDS
GCTGATGATTCTGATACAAC+TGG 0.428644 8_2:-67634156 None:intergenic
ATTGCATGGGAGGAGCCATT+TGG 0.428782 8_2:+67634303 Msa1264230:CDS
TCAGAGGTGTACTGCTGTTA+AGG 0.430225 8_2:+67634029 Msa1264230:CDS
TCAATGAAGGTTGTAAGATC+TGG 0.431004 8_2:+67632183 Msa1264230:intron
AACCTTATTAACTTCCTCTT+GGG 0.435727 8_2:-67631897 None:intergenic
AGGATATAAATTACCTGAGT+TGG 0.437333 8_2:-67632735 None:intergenic
AGCTTCACTGGTGGAGATAC+CGG 0.437992 8_2:+67633414 Msa1264230:intron
TCACTTCTGGATGCATTGTA+AGG 0.440343 8_2:-67633304 None:intergenic
AGAGAGAAGGGAATCTCATT+TGG 0.440505 8_2:+67634244 Msa1264230:CDS
TGTCATCATGTTTATGCTGT+TGG 0.446435 8_2:-67635360 None:intergenic
ACTGGCAAAGGCTCGGAGAT+TGG 0.449931 8_2:+67633275 Msa1264230:CDS
GCCAAGCCCTTCTTATACCA+TGG 0.453850 8_2:+67635409 Msa1264230:CDS
ATGATCTGGCCCACGGGCTG+GGG 0.455886 8_2:-67635063 None:intergenic
TGGCTAAGATCACTCCTAAT+GGG 0.455898 8_2:-67632626 None:intergenic
CGGCATTGCAATTTCAAAGA+AGG 0.458206 8_2:+67633434 Msa1264230:CDS
ACACAGCTGATTAGACCTTT+GGG 0.458219 8_2:-67633251 None:intergenic
ATAATTAACGCTGGATCACT+TGG 0.461108 8_2:+67630622 Msa1264230:five_prime_UTR
CTTCTTTGAAATTGCAATGC+CGG 0.461936 8_2:-67633433 None:intergenic
ATTGAGGCTTTCTTGTAGTA+GGG 0.466187 8_2:-67630963 None:intergenic
TTACCTTGAACTTTGTATTG+AGG 0.467120 8_2:-67630979 None:intergenic
ATTCCGTTACAAATGGAATT+GGG 0.467485 8_2:+67633465 Msa1264230:CDS
ACCTGAAAGGGAAAATGATC+TGG 0.469238 8_2:-67635077 None:intergenic
AAGCCTCAATACAAAGTTCA+AGG 0.469357 8_2:+67630976 Msa1264230:CDS
AATATTATGCTGATGGAGAA+TGG 0.471141 8_2:+67630902 Msa1264230:CDS
GTTTCTTACTGTGCTGAAGA+AGG 0.471237 8_2:+67632213 Msa1264230:CDS
AGGATCAATTCTGTTGAAGA+AGG 0.476795 8_2:+67634345 Msa1264230:CDS
ACAGGCAAAACTGGTCCAAA+TGG 0.487090 8_2:-67634318 None:intergenic
TCACATGACAAAGCTATTTG+TGG 0.487893 8_2:+67630676 Msa1264230:five_prime_UTR
TTTGAGACAGCAAGATTGAC+TGG 0.493697 8_2:-67632666 None:intergenic
TACATCTCCGTCTAAAATCT+CGG 0.493728 8_2:-67630875 None:intergenic
ATATAAATTACCTGAGTTGG+AGG 0.495354 8_2:-67632732 None:intergenic
TATTAGCCCATGGTATAAGA+AGG 0.496914 8_2:-67635416 None:intergenic
CAAAATCAGCACAAAAGTCA+TGG 0.497875 8_2:+67631930 Msa1264230:CDS
TGTTAAGGTTGTCTTGGTAA+TGG 0.498386 8_2:+67634044 Msa1264230:CDS
TTGCTATCCGATAGCTTCAC+TGG 0.502581 8_2:+67633402 Msa1264230:intron
AGCTGTTGCAGCTCTTCACA+TGG 0.503024 8_2:+67633202 Msa1264230:CDS
GGAGTAAGGATTCTTGGAGA+GGG 0.504125 8_2:+67632234 Msa1264230:CDS
CAAAGACCCCACTTTGGAAG+AGG 0.506615 8_2:+67631954 Msa1264230:CDS
ATCAGCTGTGTTACTGGCAA+AGG 0.512241 8_2:+67633263 Msa1264230:CDS
AGAGAGAAGAAGAGAGTAGG+AGG 0.519126 8_2:-67630786 None:intergenic
TGTGCTCAAGCCTCCAACTC+AGG 0.519656 8_2:+67632722 Msa1264230:CDS
AGGAGTAAGGATTCTTGGAG+AGG 0.519697 8_2:+67632233 Msa1264230:CDS
AATAGCTTTGTCATGTGACT+AGG 0.522732 8_2:-67630671 None:intergenic
AGGCATGATTCCGTTACAAA+TGG 0.524495 8_2:+67633458 Msa1264230:CDS
GAATGGAAGAAATCTACCTC+TGG 0.525185 8_2:+67630919 Msa1264230:CDS
GTGATATCACAGTCATCCTC+AGG 0.527858 8_2:-67634132 None:intergenic
CCAAGCCCTTCTTATACCAT+GGG 0.527974 8_2:+67635410 Msa1264230:CDS
CCTCCCAATTCCATTTGTAA+CGG 0.528245 8_2:-67633468 None:intergenic
GCTTTGCTATTTCTTTGACT+AGG 0.532020 8_2:-67632039 None:intergenic
GAATTTCCAGCAATGAGTGC+AGG 0.537751 8_2:-67632696 None:intergenic
ACTGTGCTGAAGAAGGAGTA+AGG 0.539338 8_2:+67632220 Msa1264230:CDS
AATACAATGCTTAGCTCATG+TGG 0.539529 8_2:-67635516 None:intergenic
TGCCAAGAATACAAGAGAGA+AGG 0.540006 8_2:+67634231 Msa1264230:CDS
GCCAAGAATACAAGAGAGAA+GGG 0.542461 8_2:+67634232 Msa1264230:CDS
GACAGTGGAATTGGATCACA+AGG 0.542522 8_2:+67635332 Msa1264230:CDS
GGGAAAATGATCTGGCCCAC+GGG 0.547265 8_2:-67635069 None:intergenic
ACAAAGATGAGACGATAGAA+GGG 0.549350 8_2:-67635745 None:intergenic
GTGAATGATGCTAAACAGAA+AGG 0.552242 8_2:+67634198 Msa1264230:CDS
ATTGCAATTTCAAAGAAGGC+AGG 0.554951 8_2:+67633438 Msa1264230:CDS
GTATACAAATATTATGCTGA+TGG 0.557846 8_2:+67630895 Msa1264230:CDS
CTGTGTTACTGGCAAAGGCT+CGG 0.559016 8_2:+67633268 Msa1264230:CDS
TGCAGAGAGAAGAAGAGAGT+AGG 0.561873 8_2:-67630789 None:intergenic
CAAATATTGCCTCACTTCCA+AGG 0.562000 8_2:+67632299 Msa1264230:CDS
ATAAATTCTGCCCCAGCCCG+TGG 0.562052 8_2:+67635053 Msa1264230:CDS
GCTGCAAACATTATAAAAGG+AGG 0.564563 8_2:+67633537 Msa1264230:CDS
TGAAATAGACCTTGGAAGTG+AGG 0.565780 8_2:-67632308 None:intergenic
TGTTTGCAGCAACCAAATCA+AGG 0.571187 8_2:-67633524 None:intergenic
GTTCAGCCCTCTTCCAAAGT+GGG 0.573357 8_2:-67631961 None:intergenic
ATAGCTTTGTCATGTGACTA+GGG 0.575690 8_2:-67630670 None:intergenic
ATTAGCCCATGGTATAAGAA+GGG 0.576461 8_2:-67635415 None:intergenic
CATGGGCAAAGACCCCACTT+TGG 0.577477 8_2:+67631948 Msa1264230:CDS
GGCCAGACATGAGAATTGCA+TGG 0.578690 8_2:+67634289 Msa1264230:CDS
CTGATGATTCTGATACAACT+GGG 0.582007 8_2:-67634155 None:intergenic
GGTTGAGAAAGTGAAGGCTA+AGG 0.585982 8_2:+67634086 Msa1264230:CDS
AAAATCAGCACAAAAGTCAT+GGG 0.588574 8_2:+67631931 Msa1264230:CDS
TAAATTCTGCCCCAGCCCGT+GGG 0.592262 8_2:+67635054 Msa1264230:CDS
AAAGACCCCACTTTGGAAGA+GGG 0.592379 8_2:+67631955 Msa1264230:CDS
AAGGTGGCAAAACTAAGTGT+TGG 0.592797 8_2:+67634105 Msa1264230:CDS
TGGATAGTTAAAAGGCGGAA+TGG 0.594322 8_2:-67632646 None:intergenic
CCCATGGTATAAGAAGGGCT+TGG 0.597949 8_2:-67635410 None:intergenic
AGTTCAGCCCTCTTCCAAAG+TGG 0.601662 8_2:-67631962 None:intergenic
GCCAGACATGAGAATTGCAT+GGG 0.604840 8_2:+67634290 Msa1264230:CDS
AGGGAAAATGATCTGGCCCA+CGG 0.606213 8_2:-67635070 None:intergenic
AATGATGATTAGTGATGCAA+TGG 0.607091 8_2:+67635013 Msa1264230:CDS
AGTTGCTAGCATTACAATGG+TGG 0.608323 8_2:-67634371 None:intergenic
TGAGATAAGATAATTAACGC+TGG 0.609290 8_2:+67630613 Msa1264230:five_prime_UTR
ATATTTATGGTGTAAAGAGA+AGG 0.610681 8_2:-67630703 None:intergenic
AGCAAAAGATGCAGTTACAG+AGG 0.611642 8_2:+67632063 Msa1264230:CDS
TGAGAAAGTGAAGGCTAAGG+TGG 0.619750 8_2:+67634089 Msa1264230:CDS
AGACATGAGAATTGCATGGG+AGG 0.621616 8_2:+67634293 Msa1264230:CDS
TTCAGCCCTCTTCCAAAGTG+GGG 0.625906 8_2:-67631960 None:intergenic
TCAGAGATAAATAACAAGTG+TGG 0.627362 8_2:+67635544 Msa1264230:three_prime_UTR
CCATGCAGCTTGCTCCCAAG+AGG 0.628360 8_2:+67631883 Msa1264230:intron
AATATGCTATTATTAGCCCA+TGG 0.629261 8_2:-67635426 None:intergenic
CCGTTACAAATGGAATTGGG+AGG 0.629301 8_2:+67633468 Msa1264230:CDS
TAGTTTGGTTGAGAAAGTGA+AGG 0.632684 8_2:+67634080 Msa1264230:CDS
AGGGCTTGGCAAGTTTATCA+CGG 0.633923 8_2:-67635396 None:intergenic
CAAAGTTGCTAGCATTACAA+TGG 0.639762 8_2:-67634374 None:intergenic
ACTAAGTGTTGGACCACCTG+AGG 0.649624 8_2:+67634116 Msa1264230:CDS
GAGGGCTGAACTTCTTCACA+AGG 0.649776 8_2:+67631973 Msa1264230:CDS
CTATCCGATAGCTTCACTGG+TGG 0.653530 8_2:+67633405 Msa1264230:intron
CAGCTCACTATGACTTATGG+AGG 0.659439 8_2:-67635488 None:intergenic
AGACACATGAAGATGCTATG+TGG 0.662329 8_2:-67635583 None:intergenic
TCAGGGATGTGTGTTCACAA+AGG 0.663222 8_2:+67634977 Msa1264230:intron
TTGACTGGATAGTTAAAAGG+CGG 0.663722 8_2:-67632651 None:intergenic
TGACAGGGTATAAAAGACAG+TGG 0.671884 8_2:+67635317 Msa1264230:intron
CTAACATTATCCAATAGCAA+AGG 0.679429 8_2:-67634267 None:intergenic
ATATCACAGTCATCCTCAGG+TGG 0.693050 8_2:-67634129 None:intergenic
TGATGATTCTGATACAACTG+GGG 0.745364 8_2:-67634154 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTCAATGA+AGG + chr8_2:67632170-67632189 Msa1264230:intron 10.0%
!! ATTTACTTTATAAATATAAC+CGG + chr8_2:67633637-67633656 Msa1264230:intron 10.0%
!!! TGAAATCATTTTTTTTTTTA+GGG + chr8_2:67634764-67634783 Msa1264230:intron 10.0%
!! ACTTTATAAAGTCAATAAAT+TGG + chr8_2:67632416-67632435 Msa1264230:intron 15.0%
!!! TTTATTTTGGTTTCTTTTAA+CGG - chr8_2:67633106-67633125 None:intergenic 15.0%
!! ATATTTATAAAGTAAATGCA+TGG - chr8_2:67633634-67633653 None:intergenic 15.0%
!!! TTTAATTTTTTCATGAAAAG+TGG + chr8_2:67634006-67634025 Msa1264230:intron 15.0%
!! AAAAAAAAAAATGATTTCAG+AGG - chr8_2:67634763-67634782 None:intergenic 15.0%
!!! CTGAAATCATTTTTTTTTTT+AGG + chr8_2:67634763-67634782 Msa1264230:intron 15.0%
!! CATATCATTAAATTAATGTT+TGG - chr8_2:67634828-67634847 None:intergenic 15.0%
!!! TTTTGTTGTTTTTGTAATTT+TGG - chr8_2:67635254-67635273 None:intergenic 15.0%
!!! GATTTGAAATTCAATTTATT+TGG - chr8_2:67635693-67635712 None:intergenic 15.0%
!!! TTTGAGTATATTTTCTAACA+TGG + chr8_2:67630834-67630853 Msa1264230:exon 20.0%
!! GTAAATTTATTTAACATGCT+TGG - chr8_2:67631506-67631525 None:intergenic 20.0%
!! CATGTTAAATAAATTTACCT+CGG + chr8_2:67631508-67631527 Msa1264230:intron 20.0%
!! ATTGTAAAGAATCATCAAAA+CGG - chr8_2:67631626-67631645 None:intergenic 20.0%
!! ACTTGTAAATTAAATGATCA+TGG + chr8_2:67632522-67632541 Msa1264230:intron 20.0%
!!! TCTTATTGTTTTATTTTGCT+TGG + chr8_2:67632562-67632581 Msa1264230:intron 20.0%
!!! AACTCAAACTATTTTCATAT+AGG + chr8_2:67632921-67632940 Msa1264230:intron 20.0%
!! CTTATTAAGAAAACAGTTTA+TGG - chr8_2:67632947-67632966 None:intergenic 20.0%
!!! CTGACATAAACTTTTTATTT+TGG - chr8_2:67633119-67633138 None:intergenic 20.0%
!! TTGCAATTTAAATACATTCA+TGG - chr8_2:67633675-67633694 None:intergenic 20.0%
!! TTAGCAGTTATATGAATAAA+CGG - chr8_2:67633854-67633873 None:intergenic 20.0%
!!! TTAATGTTTGGTTCTAATTT+CGG - chr8_2:67634816-67634835 None:intergenic 20.0%
!! ATTAGAATTTAATTCATGCA+CGG - chr8_2:67634889-67634908 None:intergenic 20.0%
!! AATACCAAATATACACAAAA+TGG - chr8_2:67635121-67635140 None:intergenic 20.0%
!! TTTGTGTATATTTGGTATTA+CGG + chr8_2:67635122-67635141 Msa1264230:intron 20.0%
! ATATTTATGGTGTAAAGAGA+AGG - chr8_2:67630706-67630725 None:intergenic 25.0%
! TGAGTGTCAATCAATATTTA+TGG - chr8_2:67630719-67630738 None:intergenic 25.0%
! TCTGGTTAATATAGTTGATT+TGG - chr8_2:67630762-67630781 None:intergenic 25.0%
! GTATACAAATATTATGCTGA+TGG + chr8_2:67630895-67630914 Msa1264230:CDS 25.0%
! AACTTGTATAATTCTTCATG+TGG + chr8_2:67631042-67631061 Msa1264230:intron 25.0%
!! AGATACTGTTAATAACGTTT+TGG + chr8_2:67631219-67631238 Msa1264230:intron 25.0%
!! GATACTGTTAATAACGTTTT+GGG + chr8_2:67631220-67631239 Msa1264230:intron 25.0%
!!! GTCTTTGAAATTGTGATTAA+CGG + chr8_2:67631263-67631282 Msa1264230:intron 25.0%
! TAATCTCTGATTTAACGAAT+TGG + chr8_2:67631292-67631311 Msa1264230:intron 25.0%
! TAACAACATAAGTTAATGGA+TGG - chr8_2:67631359-67631378 None:intergenic 25.0%
! AGAAATGAAGTTATAAGGAA+AGG + chr8_2:67631742-67631761 Msa1264230:intron 25.0%
! AGAAAACAACTATGTTCAAT+AGG + chr8_2:67631837-67631856 Msa1264230:intron 25.0%
! CGAGAAATTATGAAAATGAT+TGG + chr8_2:67632145-67632164 Msa1264230:intron 25.0%
!!! TACTTCAATCATTTTAGAAC+TGG + chr8_2:67632374-67632393 Msa1264230:intron 25.0%
!! TTTAGAACTGGAAAATCAAT+AGG + chr8_2:67632386-67632405 Msa1264230:intron 25.0%
!! TTAAGCTTTTTATCGAAACA+GGG - chr8_2:67632829-67632848 None:intergenic 25.0%
!! ATTAAGCTTTTTATCGAAAC+AGG - chr8_2:67632830-67632849 None:intergenic 25.0%
! TCAAATAAATCAATCCAAAC+AGG + chr8_2:67633046-67633065 Msa1264230:intron 25.0%
! ACTAACAAAAGATACATTTG+AGG + chr8_2:67633774-67633793 Msa1264230:intron 25.0%
!!! TATGAATAAACGGTCATTTT+GGG - chr8_2:67633844-67633863 None:intergenic 25.0%
!! ATATGAATAAACGGTCATTT+TGG - chr8_2:67633845-67633864 None:intergenic 25.0%
!! TTTTACTGTGTGTTTGATTA+TGG + chr8_2:67634591-67634610 Msa1264230:intron 25.0%
!!! AAAACTGATTTTGACATGTT+TGG - chr8_2:67634737-67634756 None:intergenic 25.0%
! ATTGAACTTGAAATTGTTCA+GGG + chr8_2:67634960-67634979 Msa1264230:intron 25.0%
! TTTATAAGTTTCACCTGAAA+GGG - chr8_2:67635092-67635111 None:intergenic 25.0%
!! TTTTATAAGTTTCACCTGAA+AGG - chr8_2:67635093-67635112 None:intergenic 25.0%
!! CAATCCATTTTGTGTATATT+TGG + chr8_2:67635114-67635133 Msa1264230:intron 25.0%
!! ATTTGCAAAAGCTCTAATTA+TGG + chr8_2:67635177-67635196 Msa1264230:intron 25.0%
!! TCAAATGTTTTATCATTGAC+AGG + chr8_2:67635301-67635320 Msa1264230:intron 25.0%
!! CAAATGTTTTATCATTGACA+GGG + chr8_2:67635302-67635321 Msa1264230:intron 25.0%
!!! AGCATATTTTTATGTATGTG+TGG + chr8_2:67635441-67635460 Msa1264230:three_prime_UTR 25.0%
!!! GCATATTTTTATGTATGTGT+GGG + chr8_2:67635442-67635461 Msa1264230:three_prime_UTR 25.0%
!!! TATTCCTAACTTTTTTGACA+AGG - chr8_2:67635660-67635679 None:intergenic 25.0%
! ACTTGAAAACATTTTCTGCA+TGG + chr8_2:67630515-67630534 Msa1264230:five_prime_UTR 30.0%
TGAGATAAGATAATTAACGC+TGG + chr8_2:67630613-67630632 Msa1264230:five_prime_UTR 30.0%
!!! ACAAACTAGAATTGTTTTGG+TGG - chr8_2:67630650-67630669 None:intergenic 30.0%
!! TGGTTTTCTTGTTGATTGTT+TGG - chr8_2:67630742-67630761 None:intergenic 30.0%
AATATTATGCTGATGGAGAA+TGG + chr8_2:67630902-67630921 Msa1264230:CDS 30.0%
TTACCTTGAACTTTGTATTG+AGG - chr8_2:67630982-67631001 None:intergenic 30.0%
GATGTGATCATGTAAGTATA+TGG + chr8_2:67631064-67631083 Msa1264230:intron 30.0%
! TGCTATTGTTCATCCTTTTA+AGG - chr8_2:67631098-67631117 None:intergenic 30.0%
CCTCTAACAACATAAGTTAA+TGG - chr8_2:67631363-67631382 None:intergenic 30.0%
CCATTAACTTATGTTGTTAG+AGG + chr8_2:67631360-67631379 Msa1264230:intron 30.0%
! TAACGTGCAACAAAAGTTTT+TGG - chr8_2:67631439-67631458 None:intergenic 30.0%
TATTGATGTGAGATCTACAT+AGG + chr8_2:67631573-67631592 Msa1264230:intron 30.0%
ATTGATGTGAGATCTACATA+GGG + chr8_2:67631574-67631593 Msa1264230:intron 30.0%
!! TTGCTGATTCAAAAAACTCA+AGG + chr8_2:67631659-67631678 Msa1264230:intron 30.0%
! ATTTCCCTAATTGCTCTTTT+CGG + chr8_2:67631717-67631736 Msa1264230:intron 30.0%
AACCTTATTAACTTCCTCTT+GGG - chr8_2:67631900-67631919 None:intergenic 30.0%
TAACCTTATTAACTTCCTCT+TGG - chr8_2:67631901-67631920 None:intergenic 30.0%
AGAGGAAGTTAATAAGGTTA+TGG + chr8_2:67631901-67631920 Msa1264230:CDS 30.0%
AAAATCAGCACAAAAGTCAT+GGG + chr8_2:67631931-67631950 Msa1264230:CDS 30.0%
!! GAATAAGTTAAGTGTTGCTT+AGG + chr8_2:67632112-67632131 Msa1264230:intron 30.0%
ATATGTAGTGAAATAGACCT+TGG - chr8_2:67632319-67632338 None:intergenic 30.0%
!! ATTGATTTTCAGATCCCATT+AGG + chr8_2:67632612-67632631 Msa1264230:intron 30.0%
AGATTGACTGGATAGTTAAA+AGG - chr8_2:67632657-67632676 None:intergenic 30.0%
! ATATAAATTACCTGAGTTGG+AGG - chr8_2:67632735-67632754 None:intergenic 30.0%
AGGATATAAATTACCTGAGT+TGG - chr8_2:67632738-67632757 None:intergenic 30.0%
TCGTCAAAAACACTACATAT+GGG + chr8_2:67632770-67632789 Msa1264230:intron 30.0%
AAGTGGATAGTATGAGAATA+TGG - chr8_2:67632798-67632817 None:intergenic 30.0%
TCATACTATCCACTTTCTTA+TGG + chr8_2:67632803-67632822 Msa1264230:intron 30.0%
ATAAGCTGACAACAACTTAT+TGG + chr8_2:67632962-67632981 Msa1264230:intron 30.0%
! CATTAGCTAGAACTTTTATG+AGG - chr8_2:67633077-67633096 None:intergenic 30.0%
TTCTTTACTGTTCCTTCTAA+TGG + chr8_2:67633156-67633175 Msa1264230:intron 30.0%
ATTCCGTTACAAATGGAATT+GGG + chr8_2:67633465-67633484 Msa1264230:CDS 30.0%
GTTGCTGCAAACATTATAAA+AGG + chr8_2:67633534-67633553 Msa1264230:CDS 30.0%
! TAAAAGGAGGTTTTTCATAC+AGG + chr8_2:67633550-67633569 Msa1264230:CDS 30.0%
! AATACATTCATGGATTGTAG+TGG - chr8_2:67633665-67633684 None:intergenic 30.0%
!! GTAAGTTTTCTTAGAGTGTT+TGG - chr8_2:67633801-67633820 None:intergenic 30.0%
AATATAAGATGAATGCTGCA+TGG + chr8_2:67633930-67633949 Msa1264230:intron 30.0%
CTAACATTATCCAATAGCAA+AGG - chr8_2:67634270-67634289 None:intergenic 30.0%
!! CTTTGCTATTGGATAATGTT+AGG + chr8_2:67634268-67634287 Msa1264230:CDS 30.0%
ACAGAATTGATCCTAATTAC+AGG - chr8_2:67634339-67634358 None:intergenic 30.0%
AATTGATTGTTGAAGTGAGA+GGG - chr8_2:67634421-67634440 None:intergenic 30.0%
TAATTGATTGTTGAAGTGAG+AGG - chr8_2:67634422-67634441 None:intergenic 30.0%
AAACACACAGTAAAAACGTT+TGG - chr8_2:67634586-67634605 None:intergenic 30.0%
GGTGTTAAAAATGATTTCAG+AGG - chr8_2:67634792-67634811 None:intergenic 30.0%
CATTGAACTTGAAATTGTTC+AGG + chr8_2:67634959-67634978 Msa1264230:intron 30.0%
AATGATGATTAGTGATGCAA+TGG + chr8_2:67635013-67635032 Msa1264230:CDS 30.0%
CATGTGCATATTTGATGTTA+CGG - chr8_2:67635211-67635230 None:intergenic 30.0%
AATATGCTATTATTAGCCCA+TGG - chr8_2:67635429-67635448 None:intergenic 30.0%
TCAGAGATAAATAACAAGTG+TGG + chr8_2:67635544-67635563 Msa1264230:three_prime_UTR 30.0%
TGTACCTTGTCAAAAAAGTT+AGG + chr8_2:67635653-67635672 Msa1264230:three_prime_UTR 30.0%
TTAGCAAACGCAACTCTTAA+AGG + chr8_2:67630548-67630567 Msa1264230:five_prime_UTR 35.0%
ATAATTAACGCTGGATCACT+TGG + chr8_2:67630622-67630641 Msa1264230:five_prime_UTR 35.0%
! GGGACAAACTAGAATTGTTT+TGG - chr8_2:67630653-67630672 None:intergenic 35.0%
!! ATAGCTTTGTCATGTGACTA+GGG - chr8_2:67630673-67630692 None:intergenic 35.0%
!! AATAGCTTTGTCATGTGACT+AGG - chr8_2:67630674-67630693 None:intergenic 35.0%
TCACATGACAAAGCTATTTG+TGG + chr8_2:67630676-67630695 Msa1264230:five_prime_UTR 35.0%
! TACATCTCCGTCTAAAATCT+CGG - chr8_2:67630878-67630897 None:intergenic 35.0%
ATTGAGGCTTTCTTGTAGTA+GGG - chr8_2:67630966-67630985 None:intergenic 35.0%
TATTGAGGCTTTCTTGTAGT+AGG - chr8_2:67630967-67630986 None:intergenic 35.0%
AAGCCTCAATACAAAGTTCA+AGG + chr8_2:67630976-67630995 Msa1264230:CDS 35.0%
!! TATGGACTTGCTACCTTAAA+AGG + chr8_2:67631082-67631101 Msa1264230:intron 35.0%
TGTTGTTAGAGGCTATAACT+TGG + chr8_2:67631371-67631390 Msa1264230:intron 35.0%
!!! ACAAAAGTTTTTGGTCACGT+AGG - chr8_2:67631430-67631449 None:intergenic 35.0%
TTTAACATGCTTGGATCTCA+AGG - chr8_2:67631497-67631516 None:intergenic 35.0%
AATTGCATACGAAAATTCCG+AGG - chr8_2:67631528-67631547 None:intergenic 35.0%
TTGATGTGAGATCTACATAG+GGG + chr8_2:67631575-67631594 Msa1264230:intron 35.0%
GTCGTATAAACTGTAAGCAT+CGG - chr8_2:67631695-67631714 None:intergenic 35.0%
CAAAATCAGCACAAAAGTCA+TGG + chr8_2:67631930-67631949 Msa1264230:CDS 35.0%
!! GCTTTGCTATTTCTTTGACT+AGG - chr8_2:67632042-67632061 None:intergenic 35.0%
TCAATGAAGGTTGTAAGATC+TGG + chr8_2:67632183-67632202 Msa1264230:intron 35.0%
! CTTGGTTTCAGATAGTTTTC+CGG + chr8_2:67632263-67632282 Msa1264230:CDS 35.0%
! TTGGTTTCAGATAGTTTTCC+GGG + chr8_2:67632264-67632283 Msa1264230:CDS 35.0%
! ATAGTTTTCCGGGAAATGAA+AGG + chr8_2:67632274-67632293 Msa1264230:CDS 35.0%
TATTTGGTCCTTTCATTTCC+CGG - chr8_2:67632285-67632304 None:intergenic 35.0%
! ATGCATGTATCTCAGGATTT+TGG - chr8_2:67632449-67632468 None:intergenic 35.0%
!!! ATTTTGCTTGGTTGATGATG+TGG + chr8_2:67632574-67632593 Msa1264230:intron 35.0%
TTGACTGGATAGTTAAAAGG+CGG - chr8_2:67632654-67632673 None:intergenic 35.0%
TTTGACGAGTATCACAATGA+AGG - chr8_2:67632758-67632777 None:intergenic 35.0%
CTCGTCAAAAACACTACATA+TGG + chr8_2:67632769-67632788 Msa1264230:intron 35.0%
! GCTAGAACTTTTATGAGGTA+GGG - chr8_2:67633072-67633091 None:intergenic 35.0%
! AGCTAGAACTTTTATGAGGT+AGG - chr8_2:67633073-67633092 None:intergenic 35.0%
ATCCAGAAGTGAACTGTATA+AGG + chr8_2:67633315-67633334 Msa1264230:CDS 35.0%
!! CTTCTTTGAAATTGCAATGC+CGG - chr8_2:67633436-67633455 None:intergenic 35.0%
ATTGCAATTTCAAAGAAGGC+AGG + chr8_2:67633438-67633457 Msa1264230:CDS 35.0%
GATTCCGTTACAAATGGAAT+TGG + chr8_2:67633464-67633483 Msa1264230:CDS 35.0%
GCTGCAAACATTATAAAAGG+AGG + chr8_2:67633537-67633556 Msa1264230:CDS 35.0%
TGTATCTTTCGTTAGTCGTT+TGG - chr8_2:67633738-67633757 None:intergenic 35.0%
! CAAGAAGCGTATGATGTAAT+TGG - chr8_2:67633897-67633916 None:intergenic 35.0%
! TTTTCATGAAAAGTGGTCAG+AGG + chr8_2:67634013-67634032 Msa1264230:intron 35.0%
TGTTAAGGTTGTCTTGGTAA+TGG + chr8_2:67634044-67634063 Msa1264230:CDS 35.0%
TAGTTTGGTTGAGAAAGTGA+AGG + chr8_2:67634080-67634099 Msa1264230:CDS 35.0%
TGATGATTCTGATACAACTG+GGG - chr8_2:67634157-67634176 None:intergenic 35.0%
CTGATGATTCTGATACAACT+GGG - chr8_2:67634158-67634177 None:intergenic 35.0%
TCATCAGCCAATTTCATTGA+AGG + chr8_2:67634171-67634190 Msa1264230:CDS 35.0%
GTGAATGATGCTAAACAGAA+AGG + chr8_2:67634198-67634217 Msa1264230:CDS 35.0%
ATCCTAATTACAGGCAAAAC+TGG - chr8_2:67634330-67634349 None:intergenic 35.0%
AGGATCAATTCTGTTGAAGA+AGG + chr8_2:67634345-67634364 Msa1264230:CDS 35.0%
CAAAGTTGCTAGCATTACAA+TGG - chr8_2:67634377-67634396 None:intergenic 35.0%
CATTGTAATGCTAGCAACTT+TGG + chr8_2:67634375-67634394 Msa1264230:CDS 35.0%
!! ATGTTTGGTTCTAATTTCGG+AGG - chr8_2:67634813-67634832 None:intergenic 35.0%
ATTAGTGATGCAATGGAATC+AGG + chr8_2:67635020-67635039 Msa1264230:CDS 35.0%
ATATTTGGTATTACGGTCGA+TGG + chr8_2:67635129-67635148 Msa1264230:intron 35.0%
GGTATAAAAGACAGTGGAAT+TGG + chr8_2:67635323-67635342 Msa1264230:CDS 35.0%
TGTCATCATGTTTATGCTGT+TGG - chr8_2:67635363-67635382 None:intergenic 35.0%
ATTAGCCCATGGTATAAGAA+GGG - chr8_2:67635418-67635437 None:intergenic 35.0%
TATTAGCCCATGGTATAAGA+AGG - chr8_2:67635419-67635438 None:intergenic 35.0%
AATACAATGCTTAGCTCATG+TGG - chr8_2:67635519-67635538 None:intergenic 35.0%
ACAAAGATGAGACGATAGAA+GGG - chr8_2:67635748-67635767 None:intergenic 35.0%
! TTTTCTAACATGGCTGCTAC+TGG + chr8_2:67630844-67630863 Msa1264230:exon 40.0%
! ATGCTTGCCGAGATTTTAGA+CGG + chr8_2:67630868-67630887 Msa1264230:CDS 40.0%
GAATGGAAGAAATCTACCTC+TGG + chr8_2:67630919-67630938 Msa1264230:CDS 40.0%
!!! GATAGCAACACTTTTTCCAG+AGG - chr8_2:67630938-67630957 None:intergenic 40.0%
!! CAAGGTAGAAACTCTAGAGT+TGG - chr8_2:67631479-67631498 None:intergenic 40.0%
TGATGTGAGATCTACATAGG+GGG + chr8_2:67631576-67631595 Msa1264230:intron 40.0%
CGGCGAGAAATGAAGTTATA+AGG + chr8_2:67631737-67631756 Msa1264230:intron 40.0%
TGCATGGAGATCATTGTTAG+AGG - chr8_2:67631870-67631889 None:intergenic 40.0%
CTCCCAAGAGGAAGTTAATA+AGG + chr8_2:67631895-67631914 Msa1264230:CDS 40.0%
! TTGCAGCTTTGTGTTCTTTG+AGG - chr8_2:67632009-67632028 None:intergenic 40.0%
! TCTGTAACTGCATCTTTTGC+TGG - chr8_2:67632064-67632083 None:intergenic 40.0%
AGCAAAAGATGCAGTTACAG+AGG + chr8_2:67632063-67632082 Msa1264230:CDS 40.0%
GGTTGTAAGATCTGGTGATT+TGG + chr8_2:67632191-67632210 Msa1264230:intron 40.0%
GTTTCTTACTGTGCTGAAGA+AGG + chr8_2:67632213-67632232 Msa1264230:CDS 40.0%
GAAGAAGGAGTAAGGATTCT+TGG + chr8_2:67632228-67632247 Msa1264230:CDS 40.0%
CTTGGAAGTGAGGCAATATT+TGG - chr8_2:67632301-67632320 None:intergenic 40.0%
CAAATATTGCCTCACTTCCA+AGG + chr8_2:67632299-67632318 Msa1264230:CDS 40.0%
TGAAATAGACCTTGGAAGTG+AGG - chr8_2:67632311-67632330 None:intergenic 40.0%
TCCTGAGATACATGCATTCA+TGG + chr8_2:67632452-67632471 Msa1264230:intron 40.0%
CCTGAGATACATGCATTCAT+GGG + chr8_2:67632453-67632472 Msa1264230:intron 40.0%
TGGCTAAGATCACTCCTAAT+GGG - chr8_2:67632629-67632648 None:intergenic 40.0%
ATGGCTAAGATCACTCCTAA+TGG - chr8_2:67632630-67632649 None:intergenic 40.0%
TGGATAGTTAAAAGGCGGAA+TGG - chr8_2:67632649-67632668 None:intergenic 40.0%
! TTTGAGACAGCAAGATTGAC+TGG - chr8_2:67632669-67632688 None:intergenic 40.0%
CAAGTGTTTGTGAGAGCTAA+TGG - chr8_2:67633005-67633024 None:intergenic 40.0%
CATGGTTCATTGCTTTCACT+TGG + chr8_2:67633220-67633239 Msa1264230:CDS 40.0%
ACACAGCTGATTAGACCTTT+GGG - chr8_2:67633254-67633273 None:intergenic 40.0%
AACACAGCTGATTAGACCTT+TGG - chr8_2:67633255-67633274 None:intergenic 40.0%
TCACTTCTGGATGCATTGTA+AGG - chr8_2:67633307-67633326 None:intergenic 40.0%
CACCTTATACAGTTCACTTC+TGG - chr8_2:67633320-67633339 None:intergenic 40.0%
CGGCATTGCAATTTCAAAGA+AGG + chr8_2:67633434-67633453 Msa1264230:CDS 40.0%
AGGCATGATTCCGTTACAAA+TGG + chr8_2:67633458-67633477 Msa1264230:CDS 40.0%
CCTCCCAATTCCATTTGTAA+CGG - chr8_2:67633471-67633490 None:intergenic 40.0%
TGAAGATGCTGACCTTGATT+TGG + chr8_2:67633512-67633531 Msa1264230:CDS 40.0%
TGTTTGCAGCAACCAAATCA+AGG - chr8_2:67633527-67633546 None:intergenic 40.0%
CATGTCTCAATTAGCACTTC+TGG + chr8_2:67633580-67633599 Msa1264230:intron 40.0%
AATTAGCACTTCTGGTGCAA+AGG + chr8_2:67633588-67633607 Msa1264230:intron 40.0%
TACTGCTGTTAAGGTTGTCT+TGG + chr8_2:67634038-67634057 Msa1264230:CDS 40.0%
AAGGTGGCAAAACTAAGTGT+TGG + chr8_2:67634105-67634124 Msa1264230:CDS 40.0%
GCTGATGATTCTGATACAAC+TGG - chr8_2:67634159-67634178 None:intergenic 40.0%
AGCCAATTTCATTGAAGGCT+TGG + chr8_2:67634176-67634195 Msa1264230:CDS 40.0%
CACCAAGCCTTCAATGAAAT+TGG - chr8_2:67634181-67634200 None:intergenic 40.0%
TGCCAAGAATACAAGAGAGA+AGG + chr8_2:67634231-67634250 Msa1264230:CDS 40.0%
GCCAAGAATACAAGAGAGAA+GGG + chr8_2:67634232-67634251 Msa1264230:CDS 40.0%
TCCCTTCTCTCTTGTATTCT+TGG - chr8_2:67634236-67634255 None:intergenic 40.0%
AGAGAGAAGGGAATCTCATT+TGG + chr8_2:67634244-67634263 Msa1264230:CDS 40.0%
! TCTCATTTGGCCTTTGCTAT+TGG + chr8_2:67634257-67634276 Msa1264230:CDS 40.0%
! GACCAGTTTTGCCTGTAATT+AGG + chr8_2:67634325-67634344 Msa1264230:CDS 40.0%
AGTTGCTAGCATTACAATGG+TGG - chr8_2:67634374-67634393 None:intergenic 40.0%
ACCTGAAAGGGAAAATGATC+TGG - chr8_2:67635080-67635099 None:intergenic 40.0%
TGACAGGGTATAAAAGACAG+TGG + chr8_2:67635317-67635336 Msa1264230:intron 40.0%
TGTCAGCTCACTATGACTTA+TGG - chr8_2:67635494-67635513 None:intergenic 40.0%
AGACACATGAAGATGCTATG+TGG - chr8_2:67635586-67635605 None:intergenic 40.0%
GACAAAGATGAGACGATAGA+AGG - chr8_2:67635749-67635768 None:intergenic 40.0%
TTTGTCAAGCACATCGTGTT+AGG + chr8_2:67635763-67635782 Msa1264230:three_prime_UTR 40.0%
AGAGAGAAGAAGAGAGTAGG+AGG - chr8_2:67630789-67630808 None:intergenic 45.0%
TGCAGAGAGAAGAAGAGAGT+AGG - chr8_2:67630792-67630811 None:intergenic 45.0%
GGACGAGTGAATATGCAGAT+TGG + chr8_2:67631241-67631260 Msa1264230:intron 45.0%
GTCACGTAGGATTCACTTGT+AGG - chr8_2:67631417-67631436 None:intergenic 45.0%
CTCGCCGAAAAGAGCAATTA+GGG - chr8_2:67631724-67631743 None:intergenic 45.0%
TCTCGCCGAAAAGAGCAATT+AGG - chr8_2:67631725-67631744 None:intergenic 45.0%
! AAAGACCCCACTTTGGAAGA+GGG + chr8_2:67631955-67631974 Msa1264230:CDS 45.0%
ACTGTGCTGAAGAAGGAGTA+AGG + chr8_2:67632220-67632239 Msa1264230:CDS 45.0%
AGGAGTAAGGATTCTTGGAG+AGG + chr8_2:67632233-67632252 Msa1264230:CDS 45.0%
GGAGTAAGGATTCTTGGAGA+GGG + chr8_2:67632234-67632253 Msa1264230:CDS 45.0%
TCTTGGAGAGGGAAAGTTCT+TGG + chr8_2:67632245-67632264 Msa1264230:CDS 45.0%
CCCATGAATGCATGTATCTC+AGG - chr8_2:67632456-67632475 None:intergenic 45.0%
GAATTTCCAGCAATGAGTGC+AGG - chr8_2:67632699-67632718 None:intergenic 45.0%
GAAACAGGGCCATAAGAAAG+TGG - chr8_2:67632815-67632834 None:intergenic 45.0%
TTTATGAGGTAGGGCCTGTT+TGG - chr8_2:67633063-67633082 None:intergenic 45.0%
AGCATCGTACAGCCATTAGA+AGG - chr8_2:67633171-67633190 None:intergenic 45.0%
CTGTACGATGCTGCATTTCA+GGG + chr8_2:67633179-67633198 Msa1264230:intron 45.0%
GTTCATTGCTTTCACTTGGC+TGG + chr8_2:67633224-67633243 Msa1264230:CDS 45.0%
GGTCTAATCAGCTGTGTTAC+TGG + chr8_2:67633257-67633276 Msa1264230:CDS 45.0%
! ATCAGCTGTGTTACTGGCAA+AGG + chr8_2:67633263-67633282 Msa1264230:CDS 45.0%
GCAAGGTTACAAGTCAGGAT+AGG - chr8_2:67633386-67633405 None:intergenic 45.0%
GGATAGCAAGGTTACAAGTC+AGG - chr8_2:67633391-67633410 None:intergenic 45.0%
AGTGAAGCTATCGGATAGCA+AGG - chr8_2:67633403-67633422 None:intergenic 45.0%
TTGCTATCCGATAGCTTCAC+TGG + chr8_2:67633402-67633421 Msa1264230:intron 45.0%
ATCTCCACCAGTGAAGCTAT+CGG - chr8_2:67633412-67633431 None:intergenic 45.0%
CCGTTACAAATGGAATTGGG+AGG + chr8_2:67633468-67633487 Msa1264230:CDS 45.0%
! TTCATGGATTGTAGTGGCAC+CGG - chr8_2:67633659-67633678 None:intergenic 45.0%
GCGTATGATGTAATTGGCTG+AGG - chr8_2:67633891-67633910 None:intergenic 45.0%
! TCAGAGGTGTACTGCTGTTA+AGG + chr8_2:67634029-67634048 Msa1264230:CDS 45.0%
GGAATCAGTCGCTGATAGTT+TGG + chr8_2:67634065-67634084 Msa1264230:CDS 45.0%
GGTTGAGAAAGTGAAGGCTA+AGG + chr8_2:67634086-67634105 Msa1264230:CDS 45.0%
TGAGAAAGTGAAGGCTAAGG+TGG + chr8_2:67634089-67634108 Msa1264230:CDS 45.0%
ATATCACAGTCATCCTCAGG+TGG - chr8_2:67634132-67634151 None:intergenic 45.0%
GTGATATCACAGTCATCCTC+AGG - chr8_2:67634135-67634154 None:intergenic 45.0%
GCCAGACATGAGAATTGCAT+GGG + chr8_2:67634290-67634309 Msa1264230:CDS 45.0%
TCCCATGCAATTCTCATGTC+TGG - chr8_2:67634294-67634313 None:intergenic 45.0%
AGACATGAGAATTGCATGGG+AGG + chr8_2:67634293-67634312 Msa1264230:CDS 45.0%
ACAGGCAAAACTGGTCCAAA+TGG - chr8_2:67634321-67634340 None:intergenic 45.0%
TGCTAGCAACTTTGGACTTC+AGG + chr8_2:67634383-67634402 Msa1264230:CDS 45.0%
TCAGGGATGTGTGTTCACAA+AGG + chr8_2:67634977-67634996 Msa1264230:intron 45.0%
! GCCAGATCATTTTCCCTTTC+AGG + chr8_2:67635076-67635095 Msa1264230:CDS 45.0%
GACAGTGGAATTGGATCACA+AGG + chr8_2:67635332-67635351 Msa1264230:CDS 45.0%
AGGGCTTGGCAAGTTTATCA+CGG - chr8_2:67635399-67635418 None:intergenic 45.0%
CCAAGCCCTTCTTATACCAT+GGG + chr8_2:67635410-67635429 Msa1264230:CDS 45.0%
CAGCTCACTATGACTTATGG+AGG - chr8_2:67635491-67635510 None:intergenic 45.0%
!! AAGAGAGTAGGAGGAGTGTC+TGG - chr8_2:67630780-67630799 None:intergenic 50.0%
! CAAAGACCCCACTTTGGAAG+AGG + chr8_2:67631954-67631973 Msa1264230:CDS 50.0%
TTCAGCCCTCTTCCAAAGTG+GGG - chr8_2:67631963-67631982 None:intergenic 50.0%
GTTCAGCCCTCTTCCAAAGT+GGG - chr8_2:67631964-67631983 None:intergenic 50.0%
AGTTCAGCCCTCTTCCAAAG+TGG - chr8_2:67631965-67631984 None:intergenic 50.0%
GAGGGCTGAACTTCTTCACA+AGG + chr8_2:67631973-67631992 Msa1264230:CDS 50.0%
ATTGCTCCTGCACTCATTGC+TGG + chr8_2:67632690-67632709 Msa1264230:CDS 50.0%
GCTGTACGATGCTGCATTTC+AGG + chr8_2:67633178-67633197 Msa1264230:intron 50.0%
AGCTGTTGCAGCTCTTCACA+TGG + chr8_2:67633202-67633221 Msa1264230:CDS 50.0%
!!! CACTTGGCTGGTTTTCCCAA+AGG + chr8_2:67633236-67633255 Msa1264230:CDS 50.0%
! CTGTGTTACTGGCAAAGGCT+CGG + chr8_2:67633268-67633287 Msa1264230:CDS 50.0%
CTATCCGATAGCTTCACTGG+TGG + chr8_2:67633405-67633424 Msa1264230:intron 50.0%
AGCTTCACTGGTGGAGATAC+CGG + chr8_2:67633414-67633433 Msa1264230:intron 50.0%
AGCACTTCTGGTGCAAAGGA+AGG + chr8_2:67633592-67633611 Msa1264230:intron 50.0%
GCACTTCTGGTGCAAAGGAA+GGG + chr8_2:67633593-67633612 Msa1264230:intron 50.0%
CACTTCTGGTGCAAAGGAAG+GGG + chr8_2:67633594-67633613 Msa1264230:intron 50.0%
!! ACTAAGTGTTGGACCACCTG+AGG + chr8_2:67634116-67634135 Msa1264230:CDS 50.0%
GGCCAGACATGAGAATTGCA+TGG + chr8_2:67634289-67634308 Msa1264230:CDS 50.0%
ATTGCATGGGAGGAGCCATT+TGG + chr8_2:67634303-67634322 Msa1264230:CDS 50.0%
AGGGAAAATGATCTGGCCCA+CGG - chr8_2:67635073-67635092 None:intergenic 50.0%
GCCAAGCCCTTCTTATACCA+TGG + chr8_2:67635409-67635428 Msa1264230:CDS 50.0%
CCCATGGTATAAGAAGGGCT+TGG - chr8_2:67635413-67635432 None:intergenic 50.0%
CATGGGCAAAGACCCCACTT+TGG + chr8_2:67631948-67631967 Msa1264230:CDS 55.0%
TGTGCTCAAGCCTCCAACTC+AGG + chr8_2:67632722-67632741 Msa1264230:CDS 55.0%
ACTGGCAAAGGCTCGGAGAT+TGG + chr8_2:67633275-67633294 Msa1264230:CDS 55.0%
ATAAATTCTGCCCCAGCCCG+TGG + chr8_2:67635053-67635072 Msa1264230:CDS 55.0%
TAAATTCTGCCCCAGCCCGT+GGG + chr8_2:67635054-67635073 Msa1264230:CDS 55.0%
GGGAAAATGATCTGGCCCAC+GGG - chr8_2:67635072-67635091 None:intergenic 55.0%
ACGGTCGATGGCCAGAATCA+CGG + chr8_2:67635141-67635160 Msa1264230:intron 55.0%
CCTCTTGGGAGCAAGCTGCA+TGG - chr8_2:67631886-67631905 None:intergenic 60.0%
! CCATGCAGCTTGCTCCCAAG+AGG + chr8_2:67631883-67631902 Msa1264230:intron 60.0%
TCTGGTGCAAAGGAAGGGGC+AGG + chr8_2:67633598-67633617 Msa1264230:intron 60.0%
CTGGTGCAAAGGAAGGGGCA+GGG + chr8_2:67633599-67633618 Msa1264230:intron 60.0%
AATGATCTGGCCCACGGGCT+GGG - chr8_2:67635067-67635086 None:intergenic 60.0%
AAATGATCTGGCCCACGGGC+TGG - chr8_2:67635068-67635087 None:intergenic 60.0%
ACGCTAGCTCGCCGTGATTC+TGG - chr8_2:67635155-67635174 None:intergenic 60.0%
! ATGATCTGGCCCACGGGCTG+GGG - chr8_2:67635066-67635085 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67630481 67635828 67630481 ID=Msa1264230;Name=Msa1264230
chr8_2 mRNA 67630481 67635828 67630481 ID=Msa1264230-mRNA-1;Parent=Msa1264230;Name=Msa1264230-mRNA-1;_AED=0.02;_eAED=0.02;_QI=372|1|1|1|1|1|9|392|496
chr8_2 exon 67630481 67630997 67630481 ID=Msa1264230-mRNA-1:exon:22279;Parent=Msa1264230-mRNA-1
chr8_2 exon 67631891 67632084 67631891 ID=Msa1264230-mRNA-1:exon:22280;Parent=Msa1264230-mRNA-1
chr8_2 exon 67632192 67632320 67632192 ID=Msa1264230-mRNA-1:exon:22281;Parent=Msa1264230-mRNA-1
chr8_2 exon 67632624 67632743 67632624 ID=Msa1264230-mRNA-1:exon:22282;Parent=Msa1264230-mRNA-1
chr8_2 exon 67633200 67633336 67633200 ID=Msa1264230-mRNA-1:exon:22283;Parent=Msa1264230-mRNA-1
chr8_2 exon 67633416 67633571 67633416 ID=Msa1264230-mRNA-1:exon:22284;Parent=Msa1264230-mRNA-1
chr8_2 exon 67634026 67634404 67634026 ID=Msa1264230-mRNA-1:exon:22285;Parent=Msa1264230-mRNA-1
chr8_2 exon 67634981 67635097 67634981 ID=Msa1264230-mRNA-1:exon:22286;Parent=Msa1264230-mRNA-1
chr8_2 exon 67635323 67635828 67635323 ID=Msa1264230-mRNA-1:exon:22287;Parent=Msa1264230-mRNA-1
chr8_2 five_prime_UTR 67630481 67630852 67630481 ID=Msa1264230-mRNA-1:five_prime_utr;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67630853 67630997 67630853 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67631891 67632084 67631891 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67632192 67632320 67632192 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67632624 67632743 67632624 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67633200 67633336 67633200 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67633416 67633571 67633416 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67634026 67634404 67634026 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67634981 67635097 67634981 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 CDS 67635323 67635436 67635323 ID=Msa1264230-mRNA-1:cds;Parent=Msa1264230-mRNA-1
chr8_2 three_prime_UTR 67635437 67635828 67635437 ID=Msa1264230-mRNA-1:three_prime_utr;Parent=Msa1264230-mRNA-1
Gene Sequence

>Msa1264230

ATGGCTGCTACTGGAATGCTTGCCGAGATTTTAGACGGAGATGTATACAAATATTATGCTGATGGAGAATGGAAGAAATCTACCTCTGGAAAAAGTGTTGCTATCATCAACCCTACTACAAGAAAGCCTCAATACAAAGTTCAAGCTTGCTCCCAAGAGGAAGTTAATAAGGTTATGGATTCAGCAAAATCAGCACAAAAGTCATGGGCAAAGACCCCACTTTGGAAGAGGGCTGAACTTCTTCACAAGGCAGCTGCAATCCTCAAAGAACACAAAGCTGCAATTGCAGAATGCCTAGTCAAAGAAATAGCAAAGCCAGCAAAAGATGCAGTTACAGAGGTTGTAAGATCTGGTGATTTGGTTTCTTACTGTGCTGAAGAAGGAGTAAGGATTCTTGGAGAGGGAAAGTTCTTGGTTTCAGATAGTTTTCCGGGAAATGAAAGGACCAAATATTGCCTCACTTCCAAGATCCCATTAGGAGTGATCTTAGCCATTCCGCCTTTTAACTATCCAGTCAATCTTGCTGTCTCAAAAATTGCTCCTGCACTCATTGCTGGAAATTCTATTGTGCTCAAGCCTCCAACTCAGGGAGCTGTTGCAGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGTCTAATCAGCTGTGTTACTGGCAAAGGCTCGGAGATTGGTGACTTCCTTACAATGCATCCAGAAGTGAACTGTATAAGCTTCACTGGTGGAGATACCGGCATTGCAATTTCAAAGAAGGCAGGCATGATTCCGTTACAAATGGAATTGGGAGGAAAAGATGCTTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGTGGTCAGAGGTGTACTGCTGTTAAGGTTGTCTTGGTAATGGAATCAGTCGCTGATAGTTTGGTTGAGAAAGTGAAGGCTAAGGTGGCAAAACTAAGTGTTGGACCACCTGAGGATGACTGTGATATCACCCCAGTTGTATCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTGAATGATGCTAAACAGAAAGGAGCAACATTCTGCCAAGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGCTATTGGATAATGTTAGGCCAGACATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCTGTAATTAGGATCAATTCTGTTGAAGAAGGTATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTGTTCACAAAGGATATCAACAAAGCAATGATGATTAGTGATGCAATGGAATCAGGAACAGTTCAGATAAATTCTGCCCCAGCCCGTGGGCCAGATCATTTTCCCTTTCAGGGTATAAAAGACAGTGGAATTGGATCACAAGGAATTACCAACAGCATAAACATGATGACAAAAATCAAAACTACCGTGATAAACTTGCCAAGCCCTTCTTATACCATGGGCTAA
Protein sequence

>Msa1264230

MAATGMLAEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPEVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLVEKVKAKVAKLSVGPPEDDCDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAMMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG*