Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184500 | sp|Q8L9A9|XTH8_ARATH | 82.877 | 292 | 45 | 3 | 10 | 299 | 16 | 304 | 0.0 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184500 | A0A072VQK1 | 99.333 | 300 | 2 | 0 | 1 | 300 | 1 | 300 | 0.0 | 627 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002420 | Msa0184500 | 0.811880 | 5.611226e-51 | -8.615850e-47 |
| Msa0017670 | Msa0184500 | 0.808236 | 3.419896e-50 | -8.615850e-47 |
| Msa0028440 | Msa0184500 | 0.823018 | 1.736314e-53 | -8.615850e-47 |
| Msa0040790 | Msa0184500 | 0.930043 | 2.907803e-93 | -8.615850e-47 |
| Msa0044160 | Msa0184500 | 0.818645 | 1.759522e-52 | -8.615850e-47 |
| Msa0077340 | Msa0184500 | 0.829659 | 4.548984e-55 | -8.615850e-47 |
| Msa0077560 | Msa0184500 | 0.801860 | 7.376778e-49 | -8.615850e-47 |
| Msa0098040 | Msa0184500 | 0.804102 | 2.538257e-49 | -8.615850e-47 |
| Msa0098070 | Msa0184500 | 0.813382 | 2.632532e-51 | -8.615850e-47 |
| Msa0124910 | Msa0184500 | 0.829474 | 5.043665e-55 | -8.615850e-47 |
| Msa0125360 | Msa0184500 | 0.814525 | 1.473483e-51 | -8.615850e-47 |
| Msa0127770 | Msa0184500 | 0.800828 | 1.200215e-48 | -8.615850e-47 |
| Msa0142430 | Msa0184500 | 0.804955 | 1.685047e-49 | -8.615850e-47 |
| Msa0168480 | Msa0184500 | 0.823820 | 1.127117e-53 | -8.615850e-47 |
| Msa0169410 | Msa0184500 | 0.822351 | 2.481135e-53 | -8.615850e-47 |
| Msa0180110 | Msa0184500 | 0.813935 | 1.989127e-51 | -8.615850e-47 |
| Msa0183710 | Msa0184500 | 0.811349 | 7.319957e-51 | -8.615850e-47 |
| Msa0184500 | Msa0189270 | 0.816379 | 5.701991e-52 | -8.615850e-47 |
| Msa0184500 | Msa0203080 | 0.836786 | 7.630146e-57 | -8.615850e-47 |
| Msa0184500 | Msa0246210 | 0.818746 | 1.669292e-52 | -8.615850e-47 |
| Msa0184500 | Msa0276860 | 0.800185 | 1.622620e-48 | -8.615850e-47 |
| Msa0184500 | Msa0278750 | 0.820454 | 6.802288e-53 | -8.615850e-47 |
| Msa0184500 | Msa0281470 | 0.803074 | 4.146303e-49 | -8.615850e-47 |
| Msa0184500 | Msa0284800 | 0.841898 | 3.592626e-58 | -8.615850e-47 |
| Msa0184500 | Msa0288620 | 0.808032 | 3.779252e-50 | -8.615850e-47 |
| Msa0184500 | Msa0307270 | 0.818419 | 1.979304e-52 | -8.615850e-47 |
| Msa0184500 | Msa0307670 | 0.802538 | 5.349140e-49 | -8.615850e-47 |
| Msa0184500 | Msa0309720 | 0.835050 | 2.102286e-56 | -8.615850e-47 |
| Msa0184500 | Msa0313900 | 0.805952 | 1.041331e-49 | -8.615850e-47 |
| Msa0184500 | Msa0318690 | 0.822425 | 2.385166e-53 | -8.615850e-47 |
| Msa0184500 | Msa0326710 | 0.800389 | 1.474536e-48 | -8.615850e-47 |
| Msa0184500 | Msa0330520 | 0.876817 | 1.032993e-68 | -8.615850e-47 |
| Msa0184500 | Msa0365210 | 0.820630 | 6.197778e-53 | -8.615850e-47 |
| Msa0184500 | Msa0375640 | 0.806577 | 7.688658e-50 | -8.615850e-47 |
| Msa0184500 | Msa0412790 | 0.813745 | 2.191094e-51 | -8.615850e-47 |
| Msa0184500 | Msa0424160 | 0.809571 | 1.771567e-50 | -8.615850e-47 |
| Msa0184500 | Msa0437520 | 0.808597 | 2.863911e-50 | -8.615850e-47 |
| Msa0184500 | Msa0479420 | 0.801438 | 9.004024e-49 | -8.615850e-47 |
| Msa0184500 | Msa0490430 | 0.802198 | 6.286031e-49 | -8.615850e-47 |
| Msa0184500 | Msa0495300 | 0.814700 | 1.348320e-51 | -8.615850e-47 |
| Msa0184500 | Msa0515800 | 0.800106 | 1.683544e-48 | -8.615850e-47 |
| Msa0184500 | Msa0519760 | 0.818307 | 2.098625e-52 | -8.615850e-47 |
| Msa0184500 | Msa0519810 | 0.822702 | 2.056103e-53 | -8.615850e-47 |
| Msa0184500 | Msa0519840 | 0.822148 | 2.766179e-53 | -8.615850e-47 |
| Msa0184500 | Msa0523110 | 0.811453 | 6.950090e-51 | -8.615850e-47 |
| Msa0184500 | Msa0529030 | 0.806495 | 8.000162e-50 | -8.615850e-47 |
| Msa0184500 | Msa0567610 | 0.813433 | 2.566267e-51 | -8.615850e-47 |
| Msa0184500 | Msa0574900 | 0.821460 | 3.991459e-53 | -8.615850e-47 |
| Msa0184500 | Msa0608700 | 0.810857 | 9.356183e-51 | -8.615850e-47 |
| Msa0184500 | Msa0617940 | 0.863076 | 3.222254e-64 | -8.615850e-47 |
| Msa0184500 | Msa0649200 | 0.807842 | 4.148916e-50 | -8.615850e-47 |
| Msa0184500 | Msa0652770 | 0.830557 | 2.747023e-55 | -8.615850e-47 |
| Msa0184500 | Msa0692790 | 0.889075 | 3.351073e-73 | -8.615850e-47 |
| Msa0184500 | Msa0700970 | 0.821858 | 3.228850e-53 | -8.615850e-47 |
| Msa0184500 | Msa0703950 | 0.852629 | 4.072861e-61 | -8.615850e-47 |
| Msa0184500 | Msa0726170 | -0.828643 | 8.020808e-55 | -8.615850e-47 |
| Msa0184500 | Msa0765960 | -0.805599 | 1.235101e-49 | -8.615850e-47 |
| Msa0184500 | Msa0792370 | 0.803069 | 4.156216e-49 | -8.615850e-47 |
| Msa0184500 | Msa0795750 | 0.841798 | 3.819815e-58 | -8.615850e-47 |
| Msa0184500 | Msa0813160 | 0.817386 | 3.387176e-52 | -8.615850e-47 |
| Msa0184500 | Msa0828960 | 0.800031 | 1.744013e-48 | -8.615850e-47 |
| Msa0184500 | Msa0851850 | 0.836884 | 7.202991e-57 | -8.615850e-47 |
| Msa0184500 | Msa0903340 | 0.819984 | 8.714931e-53 | -8.615850e-47 |
| Msa0184500 | Msa0930770 | 0.808606 | 2.851060e-50 | -8.615850e-47 |
| Msa0184500 | Msa0935740 | 0.807555 | 4.773285e-50 | -8.615850e-47 |
| Msa0184500 | Msa0945190 | 0.823031 | 1.723492e-53 | -8.615850e-47 |
| Msa0184500 | Msa1013190 | 0.802221 | 6.218814e-49 | -8.615850e-47 |
| Msa0184500 | Msa1022420 | 0.809319 | 2.006662e-50 | -8.615850e-47 |
| Msa0184500 | Msa1044250 | 0.820441 | 6.847193e-53 | -8.615850e-47 |
| Msa0184500 | Msa1045230 | 0.812728 | 3.663175e-51 | -8.615850e-47 |
| Msa0184500 | Msa1045280 | 0.800128 | 1.666301e-48 | -8.615850e-47 |
| Msa0184500 | Msa1072940 | 0.809210 | 2.117486e-50 | -8.615850e-47 |
| Msa0184500 | Msa1106590 | 0.833493 | 5.165952e-56 | -8.615850e-47 |
| Msa0184500 | Msa1145300 | 0.990476 | 8.144154e-183 | -8.615850e-47 |
| Msa0184500 | Msa1160920 | 0.802470 | 5.525238e-49 | -8.615850e-47 |
| Msa0184500 | Msa1165090 | 0.809460 | 1.871948e-50 | -8.615850e-47 |
| Msa0184500 | Msa1257440 | 0.814305 | 1.648475e-51 | -8.615850e-47 |
| Msa0184500 | Msa1262590 | 0.804640 | 1.960505e-49 | -8.615850e-47 |
| Msa0184500 | Msa1271810 | 0.804964 | 1.677632e-49 | -8.615850e-47 |
| Msa0184500 | Msa1305250 | 0.805035 | 1.620859e-49 | -8.615850e-47 |
| Msa0184500 | Msa1341840 | 0.806121 | 9.594639e-50 | -8.615850e-47 |
| Msa0184500 | Msa1382300 | 0.815109 | 1.093790e-51 | -8.615850e-47 |
| Msa0184500 | Msa1383820 | 0.814350 | 1.610847e-51 | -8.615850e-47 |
| Msa0184500 | Msa1391500 | 0.805428 | 1.341154e-49 | -8.615850e-47 |
| Msa0184500 | Msa1405460 | 0.813137 | 2.981109e-51 | -8.615850e-47 |
| Msa0184500 | Msa1407840 | 0.840035 | 1.107683e-57 | -8.615850e-47 |
| Msa0184500 | Msa1412000 | 0.828086 | 1.093034e-54 | -8.615850e-47 |
| Msa0184500 | Msa1421630 | 0.800098 | 1.690070e-48 | -8.615850e-47 |
| Msa0184500 | Msa1427110 | 0.813174 | 2.924577e-51 | -8.615850e-47 |
| Msa0184500 | Msa1437810 | 0.836650 | 8.264974e-57 | -8.615850e-47 |
| Msa0184500 | Msa1447100 | 0.802606 | 5.179094e-49 | -8.615850e-47 |
| Msa0184500 | Msa1449900 | 0.802145 | 6.445485e-49 | -8.615850e-47 |
| Msa0184500 | Msa1454500 | 0.833002 | 6.848773e-56 | -8.615850e-47 |
| Msa0184500 | Msa1457890 | 0.816503 | 5.346789e-52 | -8.615850e-47 |
| Msa0184500 | Msa1461370 | 0.800631 | 1.316235e-48 | -8.615850e-47 |
| Msa0184500 | Msa1463950 | 0.816482 | 5.406189e-52 | -8.615850e-47 |
| Msa0184500 | Msa1464880 | 0.808009 | 3.822842e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184500 | MtrunA17_Chr1g0206081 | 99.333 | 300 | 2 | 0 | 1 | 300 | 1 | 300 | 0.0 | 627 |
| Msa0184500 | MtrunA17_Chr4g0054451 | 53.435 | 262 | 118 | 2 | 33 | 294 | 32 | 289 | 1.09e-99 | 294 |
| Msa0184500 | MtrunA17_Chr4g0054431 | 53.435 | 262 | 118 | 2 | 33 | 294 | 30 | 287 | 1.11e-99 | 294 |
| Msa0184500 | MtrunA17_Chr1g0206681 | 45.918 | 294 | 154 | 3 | 5 | 296 | 3 | 293 | 1.36e-97 | 289 |
| Msa0184500 | MtrunA17_Chr7g0252631 | 48.966 | 290 | 144 | 2 | 5 | 294 | 2 | 287 | 1.10e-94 | 281 |
| Msa0184500 | MtrunA17_Chr7g0252621 | 48.454 | 291 | 146 | 2 | 5 | 295 | 2 | 288 | 1.46e-93 | 279 |
| Msa0184500 | MtrunA17_Chr6g0461761 | 48.592 | 284 | 142 | 2 | 12 | 295 | 9 | 288 | 1.49e-93 | 278 |
| Msa0184500 | MtrunA17_Chr6g0461731 | 47.751 | 289 | 147 | 2 | 7 | 295 | 27 | 311 | 1.58e-93 | 279 |
| Msa0184500 | MtrunA17_Chr7g0252601 | 48.227 | 282 | 142 | 2 | 13 | 294 | 10 | 287 | 6.21e-93 | 277 |
| Msa0184500 | MtrunA17_Chr2g0323161 | 49.265 | 272 | 126 | 4 | 30 | 294 | 20 | 286 | 1.37e-91 | 273 |
| Msa0184500 | MtrunA17_Chr4g0023961 | 45.946 | 296 | 138 | 5 | 6 | 294 | 8 | 288 | 1.48e-88 | 266 |
| Msa0184500 | MtrunA17_Chr4g0072611 | 46.780 | 295 | 142 | 5 | 5 | 297 | 2 | 283 | 3.61e-87 | 262 |
| Msa0184500 | MtrunA17_Chr7g0258911 | 47.079 | 291 | 141 | 5 | 8 | 296 | 2 | 281 | 3.18e-86 | 259 |
| Msa0184500 | MtrunA17_Chr8g0377841 | 44.792 | 288 | 143 | 6 | 9 | 295 | 10 | 282 | 8.34e-84 | 253 |
| Msa0184500 | MtrunA17_Chr3g0122021 | 43.929 | 280 | 145 | 3 | 16 | 294 | 9 | 277 | 7.35e-83 | 251 |
| Msa0184500 | MtrunA17_Chr3g0122031 | 44.245 | 278 | 143 | 3 | 18 | 294 | 11 | 277 | 8.65e-83 | 251 |
| Msa0184500 | MtrunA17_Chr4g0072671 | 46.931 | 277 | 133 | 5 | 28 | 297 | 19 | 288 | 6.87e-81 | 246 |
| Msa0184500 | MtrunA17_Chr4g0071341 | 45.055 | 273 | 139 | 4 | 29 | 297 | 19 | 284 | 1.37e-80 | 245 |
| Msa0184500 | MtrunA17_Chr2g0299061 | 43.986 | 291 | 149 | 4 | 11 | 297 | 9 | 289 | 1.59e-79 | 243 |
| Msa0184500 | MtrunA17_Chr6g0486581 | 41.958 | 286 | 152 | 5 | 12 | 294 | 9 | 283 | 1.06e-78 | 241 |
| Msa0184500 | MtrunA17_Chr4g0072601 | 42.807 | 285 | 151 | 4 | 14 | 294 | 7 | 283 | 3.77e-77 | 237 |
| Msa0184500 | MtrunA17_Chr8g0340001 | 48.523 | 237 | 115 | 4 | 59 | 294 | 1 | 231 | 3.08e-74 | 227 |
| Msa0184500 | MtrunA17_Chr8g0374231 | 98.131 | 107 | 2 | 0 | 194 | 300 | 1 | 107 | 3.95e-74 | 223 |
| Msa0184500 | MtrunA17_Chr8g0389641 | 40.925 | 281 | 118 | 5 | 18 | 297 | 12 | 245 | 3.19e-72 | 223 |
| Msa0184500 | MtrunA17_Chr4g0072681 | 49.333 | 225 | 107 | 3 | 77 | 297 | 25 | 246 | 6.13e-71 | 219 |
| Msa0184500 | MtrunA17_Chr5g0443391 | 41.065 | 263 | 144 | 4 | 33 | 294 | 26 | 278 | 3.38e-68 | 214 |
| Msa0184500 | MtrunA17_Chr3g0096651 | 42.803 | 264 | 140 | 5 | 33 | 294 | 28 | 282 | 1.50e-65 | 207 |
| Msa0184500 | MtrunA17_Chr2g0303861 | 36.861 | 274 | 164 | 7 | 9 | 281 | 3 | 268 | 2.18e-61 | 196 |
| Msa0184500 | MtrunA17_Chr8g0390201 | 46.354 | 192 | 100 | 2 | 106 | 294 | 18 | 209 | 9.44e-61 | 192 |
| Msa0184500 | MtrunA17_Chr8g0375981 | 36.271 | 295 | 176 | 6 | 9 | 300 | 11 | 296 | 3.08e-59 | 192 |
| Msa0184500 | MtrunA17_Chr4g0028221 | 37.993 | 279 | 156 | 8 | 21 | 294 | 38 | 304 | 1.13e-58 | 190 |
| Msa0184500 | MtrunA17_Chr7g0235541 | 44.495 | 218 | 109 | 7 | 82 | 296 | 1 | 209 | 1.31e-58 | 186 |
| Msa0184500 | MtrunA17_Chr8g0365231 | 35.099 | 302 | 179 | 7 | 8 | 294 | 11 | 310 | 1.74e-58 | 189 |
| Msa0184500 | MtrunA17_Chr5g0410621 | 38.686 | 274 | 156 | 6 | 35 | 300 | 42 | 311 | 1.94e-58 | 191 |
| Msa0184500 | MtrunA17_Chr2g0327411 | 37.979 | 287 | 156 | 9 | 16 | 294 | 37 | 309 | 5.55e-57 | 186 |
| Msa0184500 | MtrunA17_Chr1g0180451 | 34.768 | 302 | 165 | 9 | 9 | 294 | 9 | 294 | 1.21e-55 | 182 |
| Msa0184500 | MtrunA17_Chr2g0303721 | 34.708 | 291 | 167 | 9 | 10 | 298 | 5 | 274 | 1.89e-54 | 178 |
| Msa0184500 | MtrunA17_Chr8g0382041 | 35.316 | 269 | 169 | 4 | 35 | 300 | 34 | 300 | 2.89e-54 | 179 |
| Msa0184500 | MtrunA17_Chr7g0264731 | 37.132 | 272 | 144 | 8 | 35 | 295 | 37 | 292 | 7.33e-54 | 177 |
| Msa0184500 | MtrunA17_Chr1g0161951 | 36.704 | 267 | 158 | 6 | 35 | 296 | 33 | 293 | 1.32e-53 | 177 |
| Msa0184500 | MtrunA17_Chr4g0072641 | 42.748 | 131 | 58 | 3 | 168 | 297 | 37 | 151 | 1.84e-28 | 107 |
| Msa0184500 | MtrunA17_Chr8g0374241 | 97.222 | 36 | 1 | 0 | 100 | 135 | 1 | 36 | 2.03e-19 | 79.7 |
| Msa0184500 | MtrunA17_Chr8g0350711 | 34.682 | 173 | 106 | 4 | 59 | 231 | 56 | 221 | 9.58e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184500 | AT1G11545.1 | 82.877 | 292 | 45 | 3 | 10 | 299 | 16 | 304 | 0.0 | 515 |
| Msa0184500 | AT5G13870.2 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa0184500 | AT5G13870.1 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa0184500 | AT5G13870.3 | 50.859 | 291 | 138 | 3 | 4 | 294 | 2 | 287 | 5.41e-98 | 290 |
| Msa0184500 | AT4G37800.1 | 49.141 | 291 | 141 | 4 | 6 | 295 | 6 | 290 | 2.96e-97 | 288 |
| Msa0184500 | AT5G65730.1 | 47.735 | 287 | 146 | 2 | 8 | 294 | 8 | 290 | 3.48e-96 | 286 |
| Msa0184500 | AT2G06850.1 | 53.846 | 260 | 116 | 2 | 35 | 294 | 35 | 290 | 2.89e-93 | 278 |
| Msa0184500 | AT2G06850.2 | 57.143 | 231 | 95 | 2 | 65 | 295 | 5 | 231 | 3.26e-90 | 268 |
| Msa0184500 | AT2G14620.1 | 45.675 | 289 | 151 | 3 | 11 | 296 | 11 | 296 | 4.48e-90 | 270 |
| Msa0184500 | AT4G03210.1 | 46.528 | 288 | 142 | 5 | 9 | 294 | 7 | 284 | 2.02e-89 | 268 |
| Msa0184500 | AT5G57560.1 | 44.369 | 293 | 142 | 5 | 8 | 294 | 4 | 281 | 5.17e-86 | 259 |
| Msa0184500 | AT3G23730.1 | 43.813 | 299 | 152 | 5 | 4 | 297 | 2 | 289 | 2.12e-84 | 256 |
| Msa0184500 | AT5G57550.1 | 46.102 | 295 | 145 | 7 | 1 | 294 | 1 | 282 | 1.34e-83 | 253 |
| Msa0184500 | AT5G57540.1 | 48.881 | 268 | 127 | 5 | 33 | 297 | 24 | 284 | 1.38e-83 | 253 |
| Msa0184500 | AT5G57530.1 | 47.794 | 272 | 132 | 5 | 29 | 297 | 21 | 285 | 3.80e-83 | 252 |
| Msa0184500 | AT4G25810.1 | 43.310 | 284 | 157 | 2 | 12 | 294 | 3 | 283 | 7.71e-83 | 251 |
| Msa0184500 | AT4G03210.2 | 52.174 | 230 | 104 | 3 | 67 | 294 | 31 | 256 | 1.37e-82 | 250 |
| Msa0184500 | AT4G30270.1 | 43.003 | 293 | 141 | 5 | 6 | 297 | 1 | 268 | 2.94e-81 | 247 |
| Msa0184500 | AT4G25820.1 | 46.520 | 273 | 134 | 4 | 28 | 296 | 23 | 287 | 4.64e-80 | 244 |
| Msa0184500 | AT4G14130.1 | 42.905 | 296 | 157 | 6 | 4 | 297 | 2 | 287 | 2.21e-79 | 243 |
| Msa0184500 | AT2G14620.2 | 49.138 | 232 | 114 | 2 | 66 | 296 | 18 | 246 | 5.08e-79 | 240 |
| Msa0184500 | AT4G13090.1 | 42.756 | 283 | 155 | 4 | 15 | 294 | 10 | 288 | 1.22e-77 | 238 |
| Msa0184500 | AT2G14620.3 | 49.776 | 223 | 108 | 2 | 75 | 296 | 16 | 235 | 2.38e-76 | 233 |
| Msa0184500 | AT5G48070.1 | 41.297 | 293 | 157 | 6 | 5 | 295 | 3 | 282 | 1.29e-75 | 233 |
| Msa0184500 | AT3G25050.1 | 38.966 | 290 | 169 | 5 | 6 | 294 | 7 | 289 | 3.58e-75 | 232 |
| Msa0184500 | AT4G13080.1 | 40.138 | 289 | 166 | 4 | 6 | 294 | 10 | 291 | 7.97e-74 | 229 |
| Msa0184500 | AT4G28850.1 | 41.053 | 285 | 159 | 5 | 15 | 295 | 9 | 288 | 8.10e-74 | 229 |
| Msa0184500 | AT2G18800.1 | 39.423 | 312 | 157 | 7 | 1 | 295 | 1 | 297 | 5.89e-72 | 224 |
| Msa0184500 | AT4G30280.1 | 40.678 | 295 | 155 | 6 | 3 | 295 | 6 | 282 | 1.76e-70 | 220 |
| Msa0184500 | AT4G30290.1 | 39.932 | 293 | 156 | 6 | 5 | 295 | 3 | 277 | 3.11e-68 | 214 |
| Msa0184500 | AT1G65310.1 | 43.019 | 265 | 140 | 5 | 33 | 295 | 27 | 282 | 3.54e-68 | 214 |
| Msa0184500 | AT1G65310.2 | 43.019 | 265 | 140 | 5 | 33 | 295 | 49 | 304 | 3.99e-68 | 214 |
| Msa0184500 | AT2G01850.1 | 35.714 | 294 | 181 | 4 | 11 | 300 | 7 | 296 | 2.40e-61 | 198 |
| Msa0184500 | AT1G32170.1 | 38.079 | 302 | 177 | 6 | 5 | 300 | 2 | 299 | 4.18e-61 | 197 |
| Msa0184500 | AT3G44990.1 | 37.874 | 301 | 157 | 7 | 12 | 294 | 5 | 293 | 1.65e-60 | 194 |
| Msa0184500 | AT1G14720.1 | 35.836 | 293 | 180 | 4 | 12 | 300 | 8 | 296 | 6.00e-59 | 192 |
| Msa0184500 | AT1G10550.1 | 35.740 | 277 | 160 | 4 | 35 | 294 | 34 | 309 | 8.22e-57 | 186 |
| Msa0184500 | AT4G18990.1 | 35.714 | 280 | 165 | 3 | 35 | 300 | 40 | 318 | 5.69e-55 | 182 |
| Msa0184500 | AT2G36870.1 | 34.000 | 300 | 176 | 8 | 6 | 294 | 9 | 297 | 7.72e-53 | 175 |
| Msa0184500 | AT3G48580.1 | 33.977 | 259 | 149 | 8 | 37 | 294 | 36 | 273 | 4.82e-48 | 162 |
| Msa0184500 | AT3G48580.3 | 36.364 | 231 | 126 | 7 | 65 | 294 | 4 | 214 | 1.76e-46 | 156 |
| Msa0184500 | AT4G18990.2 | 35.021 | 237 | 133 | 5 | 84 | 300 | 9 | 244 | 7.64e-41 | 143 |
| Msa0184500 | AT3G48580.2 | 28.571 | 259 | 143 | 9 | 37 | 294 | 36 | 253 | 1.82e-31 | 118 |
| Msa0184500 | AT2G36870.2 | 35.260 | 173 | 98 | 4 | 6 | 167 | 9 | 178 | 4.36e-28 | 107 |
Find 91 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAAGTTCATCTCTTTC+TGG | 0.152227 | 1_4:+74116936 | None:intergenic |
| TGTAAACTTCATTTGTTATA+TGG | 0.157148 | 1_4:+74115765 | None:intergenic |
| TATGATGCTTGGCATCTTTC+AGG | 0.170390 | 1_4:-74116037 | Msa0184500:CDS |
| AAAGGACCCTCCATCCATTT+TGG | 0.172552 | 1_4:+74117842 | None:intergenic |
| TTGTTCTTGAACACCCTTAT+TGG | 0.227899 | 1_4:+74116280 | None:intergenic |
| TTTGGGTAGGAGGAGAATTT+TGG | 0.254879 | 1_4:+74117860 | None:intergenic |
| AATTCTCCTCCTACCCAAAA+TGG | 0.278749 | 1_4:-74117856 | Msa0184500:exon |
| AAGTACATTGGTTTCTCATT+TGG | 0.290156 | 1_4:+74116235 | None:intergenic |
| ACATTTGTTTGAATCAAATA+TGG | 0.300118 | 1_4:+74116885 | None:intergenic |
| TTGTGGATAGAGTTCCAATA+AGG | 0.315911 | 1_4:-74116294 | Msa0184500:CDS |
| GATAGAGATTTACATGTTCA+TGG | 0.321658 | 1_4:+74115656 | None:intergenic |
| TCTTTCAGGTGATCAGAAAA+TGG | 0.325557 | 1_4:-74116023 | Msa0184500:CDS |
| ATGGAGGGATTCTCTACTTC+TGG | 0.332348 | 1_4:+74117892 | None:intergenic |
| GTAAACTTCATTTGTTATAT+GGG | 0.336589 | 1_4:+74115766 | None:intergenic |
| AAGAATGAACTTACACTATC+TGG | 0.346292 | 1_4:+74116766 | None:intergenic |
| GTTCAGTATGAAGCTGAAAT+TGG | 0.347997 | 1_4:-74117154 | Msa0184500:CDS |
| AGTACATTGGTTTCTCATTT+GGG | 0.354048 | 1_4:+74116236 | None:intergenic |
| AGCAGAAGCAGCTATGTCTA+AGG | 0.356338 | 1_4:-74117763 | Msa0184500:CDS |
| GGACTCAATGAGCACTCTTC+AGG | 0.364578 | 1_4:+74115929 | None:intergenic |
| GTTGAAACACATTTAGGAAA+TGG | 0.376286 | 1_4:+74116085 | None:intergenic |
| ATGATAATAAGCAGCTACTA+TGG | 0.378445 | 1_4:+74117788 | None:intergenic |
| TCATTTGGGAAGAAATTGTT+TGG | 0.386974 | 1_4:+74116250 | None:intergenic |
| GGATCTCTGAACCCGAGGTT+TGG | 0.394261 | 1_4:+74117913 | None:intergenic |
| CATCTGTAGAGGTAGTAAAA+TGG | 0.396419 | 1_4:+74117700 | None:intergenic |
| GTTGTGGTTGAAACACATTT+AGG | 0.398748 | 1_4:+74116079 | None:intergenic |
| ACAAAACAAAGATACAGATT+TGG | 0.405420 | 1_4:-74117180 | Msa0184500:CDS |
| ATCACACCTATTCTATTCTC+TGG | 0.408329 | 1_4:-74116797 | Msa0184500:CDS |
| ATCAGAAAATGGATTATGCT+TGG | 0.410696 | 1_4:-74116012 | Msa0184500:CDS |
| CAAACAAATGTGTACAAGAA+TGG | 0.414124 | 1_4:-74116873 | Msa0184500:CDS |
| TTGCAGATGTGTACAGAAAA+TGG | 0.418568 | 1_4:-74116966 | Msa0184500:intron |
| ATCAACACTAAAGTCTTTGT+AGG | 0.426921 | 1_4:+74116126 | None:intergenic |
| GTGAGATGAGACATATGCTT+TGG | 0.427321 | 1_4:-74116839 | Msa0184500:CDS |
| GAGCACTCTTCAGGCAAAGT+TGG | 0.439518 | 1_4:+74115938 | None:intergenic |
| AAACAAATGTGTACAAGAAT+GGG | 0.444792 | 1_4:-74116872 | Msa0184500:CDS |
| AAGAATGGAAAATGAAGAAA+AGG | 0.445067 | 1_4:+74117824 | None:intergenic |
| TGTGGATAGAGTTCCAATAA+GGG | 0.449235 | 1_4:-74116293 | Msa0184500:CDS |
| TCAGAAAATGGATTATGCTT+GGG | 0.479320 | 1_4:-74116011 | Msa0184500:CDS |
| TCCATGGGAGTAATGTATCA+TGG | 0.480160 | 1_4:-74115909 | Msa0184500:exon |
| AAGAGTGCTCATTGAGTCCA+TGG | 0.488497 | 1_4:-74115925 | Msa0184500:CDS |
| TATAACAAATGAAGTTTACA+TGG | 0.489458 | 1_4:-74115762 | Msa0184500:three_prime_UTR |
| GTTATTCCAGAGAATAGAAT+AGG | 0.498751 | 1_4:+74116791 | None:intergenic |
| TTATTGAACTTCCAAACCTC+GGG | 0.499927 | 1_4:-74117924 | Msa0184500:five_prime_UTR |
| TGCATAATATATGCAAGGTC+CGG | 0.505110 | 1_4:+74115683 | None:intergenic |
| GGCTGCAAGGAAAAGAAGAA+TGG | 0.506963 | 1_4:+74117809 | None:intergenic |
| GTCACGATGTTATAAGTGAA+TGG | 0.513067 | 1_4:-74118060 | Msa0184500:five_prime_UTR |
| CCATGGGAGTAATGTATCAT+GGG | 0.513209 | 1_4:-74115908 | Msa0184500:exon |
| GTGTATGGAATGCAGATGAT+TGG | 0.516261 | 1_4:-74116204 | Msa0184500:CDS |
| ATGTGTACAGAAAATGGTGC+AGG | 0.516508 | 1_4:-74116960 | Msa0184500:CDS |
| GGTGGCCGGTGTTCGAACTC+CGG | 0.524090 | 1_4:-74115702 | Msa0184500:three_prime_UTR |
| TTAGTGTTGATGCTTGTCAA+TGG | 0.533968 | 1_4:-74116114 | Msa0184500:CDS |
| ACACTTGAAAACAAGTACAT+TGG | 0.541308 | 1_4:+74116223 | None:intergenic |
| CCTCTACAGATGGACAGATC+TGG | 0.542190 | 1_4:-74117689 | Msa0184500:CDS |
| TATTAAACAACTAAACAAAG+TGG | 0.542281 | 1_4:-74118007 | Msa0184500:five_prime_UTR |
| GCATATGATGTTACAACTGT+AGG | 0.546615 | 1_4:-74117977 | Msa0184500:five_prime_UTR |
| TAGTGTTGATGCTTGTCAAT+GGG | 0.548485 | 1_4:-74116113 | Msa0184500:CDS |
| TTTATTGAACTTCCAAACCT+CGG | 0.551560 | 1_4:-74117925 | Msa0184500:five_prime_UTR |
| TGTATGGAATGCAGATGATT+GGG | 0.552558 | 1_4:-74116203 | Msa0184500:CDS |
| CCCATGATACATTACTCCCA+TGG | 0.558590 | 1_4:+74115908 | None:intergenic |
| GATGATTGGGCCACAAGAGG+TGG | 0.559220 | 1_4:-74116190 | Msa0184500:CDS |
| AATGTGTACAAGAATGGGAC+AGG | 0.565601 | 1_4:-74116867 | Msa0184500:CDS |
| CCTCGTGATCTTAACTCAGT+TGG | 0.570654 | 1_4:+74115611 | None:intergenic |
| TCCTACCCAAAATGGATGGA+GGG | 0.570885 | 1_4:-74117848 | Msa0184500:exon |
| GCAGAAGCAGCTATGTCTAA+GGG | 0.571565 | 1_4:-74117762 | Msa0184500:CDS |
| CTCCTACCCAAAATGGATGG+AGG | 0.581100 | 1_4:-74117849 | Msa0184500:exon |
| CTCCTCCTACCCAAAATGGA+TGG | 0.582425 | 1_4:-74117852 | Msa0184500:exon |
| TGCAATAGTCATAGATGACA+AGG | 0.582934 | 1_4:+74115978 | None:intergenic |
| TTGGTAGGAGGTGATTCTGC+TGG | 0.585894 | 1_4:-74117135 | Msa0184500:CDS |
| GACAATGCATAATATATGCA+AGG | 0.589437 | 1_4:+74115678 | None:intergenic |
| AACAAAGATACAGATTTGGA+TGG | 0.590115 | 1_4:-74117176 | Msa0184500:CDS |
| GGTGGGATCAATATGATGCT+TGG | 0.593619 | 1_4:-74116048 | Msa0184500:CDS |
| TTGTTTAATAAATTTGCATG+TGG | 0.595209 | 1_4:+74118020 | None:intergenic |
| AGTATGAAGCTGAAATTGGT+AGG | 0.601753 | 1_4:-74117150 | Msa0184500:CDS |
| GCAGATGATTGGGCCACAAG+AGG | 0.605501 | 1_4:-74116193 | Msa0184500:CDS |
| AAGCAGCTACTATGGCTGCA+AGG | 0.616062 | 1_4:+74117796 | None:intergenic |
| CCAGATCTGTCCATCTGTAG+AGG | 0.619087 | 1_4:+74117689 | None:intergenic |
| TAGGTGTGATAGTCCTCAGT+GGG | 0.619254 | 1_4:+74116810 | None:intergenic |
| CTTCTGGATCTCTGAACCCG+AGG | 0.625868 | 1_4:+74117908 | None:intergenic |
| AAGACAACTTCAGCATAATG+TGG | 0.628622 | 1_4:-74117731 | Msa0184500:CDS |
| TCTTTGTAGGATGACACAAA+TGG | 0.631516 | 1_4:+74116139 | None:intergenic |
| CTATCTATGAACATGTTGAA+CGG | 0.632795 | 1_4:-74115576 | None:intergenic |
| TTGAATGTTTGACAGGATGT+GGG | 0.642879 | 1_4:-74117209 | Msa0184500:intron |
| ATGAAGCTGAAATTGGTAGG+AGG | 0.646766 | 1_4:-74117147 | Msa0184500:CDS |
| AGAGTGCTCATTGAGTCCAT+GGG | 0.653623 | 1_4:-74115924 | Msa0184500:CDS |
| TGTGTACAGAAAATGGTGCA+GGG | 0.655933 | 1_4:-74116959 | Msa0184500:CDS |
| AATGAACTTACACTATCTGG+TGG | 0.659740 | 1_4:+74116769 | None:intergenic |
| CCAACTGAGTTAAGATCACG+AGG | 0.667124 | 1_4:-74115611 | Msa0184500:three_prime_UTR |
| CTCTCATTAGACAATGACAC+AGG | 0.668040 | 1_4:-74117663 | Msa0184500:intron |
| CATGGGAGTAATGTATCATG+GGG | 0.672948 | 1_4:-74115907 | Msa0184500:exon |
| AAGGTCCGGAGTTCGAACAC+CGG | 0.675648 | 1_4:+74115697 | None:intergenic |
| GCTTTGGTTTGATCCCACTG+AGG | 0.724888 | 1_4:-74116823 | Msa0184500:CDS |
| ATAGGTGTGATAGTCCTCAG+TGG | 0.744401 | 1_4:+74116809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCGATAGAATTAATTTT+GGG | - | chr1_4:74116279-74116298 | Msa0184500:CDS | 15.0% |
| !! | TTGTTTAATAAATTTGCATG+TGG | + | chr1_4:74115619-74115638 | None:intergenic | 20.0% |
| !! | TATTAAACAACTAAACAAAG+TGG | - | chr1_4:74115629-74115648 | Msa0184500:three_prime_UTR | 20.0% |
| !!! | GATTTACATAAACTTACTTT+TGG | - | chr1_4:74116212-74116231 | Msa0184500:CDS | 20.0% |
| !!! | CTTTTCGATAGAATTAATTT+TGG | - | chr1_4:74116278-74116297 | Msa0184500:CDS | 20.0% |
| !!! | AAAGTTGAGAGTATAATTTA+TGG | - | chr1_4:74116317-74116336 | Msa0184500:intron | 20.0% |
| !!! | AACATTCAATGCTTTAAAAA+TGG | + | chr1_4:74116416-74116435 | None:intergenic | 20.0% |
| !! | ACATTTGTTTGAATCAAATA+TGG | + | chr1_4:74116754-74116773 | None:intergenic | 20.0% |
| !!! | TTGATGTCATTTTTTTACTT+GGG | + | chr1_4:74116929-74116948 | None:intergenic | 20.0% |
| !!! | TTTGATGTCATTTTTTTACT+TGG | + | chr1_4:74116930-74116949 | None:intergenic | 20.0% |
| !!! | AGTTTAAGACTTTTTGTTTT+TGG | - | chr1_4:74117044-74117063 | Msa0184500:intron | 20.0% |
| !! | ATGAATATGATTATGTCATA+TGG | - | chr1_4:74117178-74117197 | Msa0184500:CDS | 20.0% |
| !! | TAAAAAGACCTTATATTTCA+AGG | - | chr1_4:74117228-74117247 | Msa0184500:intron | 20.0% |
| !! | AAAAAGACCTTATATTTCAA+GGG | - | chr1_4:74117229-74117248 | Msa0184500:intron | 20.0% |
| !! | ACCTTAATTCAAGATATTTA+TGG | - | chr1_4:74117269-74117288 | Msa0184500:intron | 20.0% |
| !! | TCCATAAATATCTTGAATTA+AGG | + | chr1_4:74117273-74117292 | None:intergenic | 20.0% |
| !!! | GTAAACTTCATTTGTTATAT+GGG | + | chr1_4:74117873-74117892 | None:intergenic | 20.0% |
| !!! | TGTAAACTTCATTTGTTATA+TGG | + | chr1_4:74117874-74117893 | None:intergenic | 20.0% |
| !! | TATAACAAATGAAGTTTACA+TGG | - | chr1_4:74117874-74117893 | Msa0184500:five_prime_UTR | 20.0% |
| ! | AAGAATGGAAAATGAAGAAA+AGG | + | chr1_4:74115815-74115834 | None:intergenic | 25.0% |
| !! | AAATACTCTAAGAGTTTGTT+CGG | - | chr1_4:74116119-74116138 | Msa0184500:CDS | 25.0% |
| !!! | AAACTTACTTTTGGATAGTT+TGG | - | chr1_4:74116221-74116240 | Msa0184500:CDS | 25.0% |
| !!! | ATAGAATTAATTTTGGGACT+AGG | - | chr1_4:74116285-74116304 | Msa0184500:CDS | 25.0% |
| ! | ACAAAACAAAGATACAGATT+TGG | - | chr1_4:74116456-74116475 | Msa0184500:intron | 25.0% |
| ! | GGATTCATAAAAACACAAAA+AGG | + | chr1_4:74116617-74116636 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTATGAATCCAAT+TGG | - | chr1_4:74116620-74116639 | Msa0184500:intron | 25.0% |
| !!! | TGAACTTGATTTTGAGTTTT+TGG | - | chr1_4:74116711-74116730 | Msa0184500:intron | 25.0% |
| !!! | GAACTTGATTTTGAGTTTTT+GGG | - | chr1_4:74116712-74116731 | Msa0184500:intron | 25.0% |
| ! | AAACAAATGTGTACAAGAAT+GGG | - | chr1_4:74116764-74116783 | Msa0184500:intron | 25.0% |
| ! | CATTCTTATATTGCTCTTAT+TGG | - | chr1_4:74116886-74116905 | Msa0184500:CDS | 25.0% |
| !!! | TTAAGACTTTTTGTTTTTGG+TGG | - | chr1_4:74117047-74117066 | Msa0184500:intron | 25.0% |
| ! | AGTAAAATGTATGTCCAATA+TGG | - | chr1_4:74117120-74117139 | Msa0184500:CDS | 25.0% |
| ! | CTAGCAATGATAATTAAACT+AGG | + | chr1_4:74117150-74117169 | None:intergenic | 25.0% |
| ! | TTTCAACCACAACAAAAAAT+TGG | - | chr1_4:74117567-74117586 | Msa0184500:intron | 25.0% |
| TTTATTGAACTTCCAAACCT+CGG | - | chr1_4:74115711-74115730 | Msa0184500:three_prime_UTR | 30.0% | |
| !!! | AGAATTTTGGTTCAAGAGAA+TGG | + | chr1_4:74115766-74115785 | None:intergenic | 30.0% |
| ATGATAATAAGCAGCTACTA+TGG | + | chr1_4:74115851-74115870 | None:intergenic | 30.0% | |
| GAGTAAGTCAAACATTATTC+TGG | - | chr1_4:74116353-74116372 | Msa0184500:intron | 30.0% | |
| AAGTCAAACATTATTCTGGA+AGG | - | chr1_4:74116357-74116376 | Msa0184500:intron | 30.0% | |
| !! | TAAAGCATTGAATGTTTGAC+AGG | - | chr1_4:74116420-74116439 | Msa0184500:intron | 30.0% |
| AACAAAGATACAGATTTGGA+TGG | - | chr1_4:74116460-74116479 | Msa0184500:intron | 30.0% | |
| ! | GTTTTTATGAATCCAATTGG+TGG | - | chr1_4:74116623-74116642 | Msa0184500:intron | 30.0% |
| AAATCAAGTTCATCTCTTTC+TGG | + | chr1_4:74116703-74116722 | None:intergenic | 30.0% | |
| CAAACAAATGTGTACAAGAA+TGG | - | chr1_4:74116763-74116782 | Msa0184500:intron | 30.0% | |
| GTTATTCCAGAGAATAGAAT+AGG | + | chr1_4:74116848-74116867 | None:intergenic | 30.0% | |
| AAGAATGAACTTACACTATC+TGG | + | chr1_4:74116873-74116892 | None:intergenic | 30.0% | |
| ! | CATCAAAGTGTTTGCAAATA+TGG | - | chr1_4:74116943-74116962 | Msa0184500:CDS | 30.0% |
| GTGTTTGCAAATATGGTAAT+AGG | - | chr1_4:74116950-74116969 | Msa0184500:CDS | 30.0% | |
| AATATGGTAATAGGCTAAGT+TGG | - | chr1_4:74116959-74116978 | Msa0184500:CDS | 30.0% | |
| !!! | TTTATGCTTTTGTCGGTTTA+AGG | - | chr1_4:74116990-74117009 | Msa0184500:intron | 30.0% |
| !!! | TTATGCTTTTGTCGGTTTAA+GGG | - | chr1_4:74116991-74117010 | Msa0184500:intron | 30.0% |
| TTGACAATTGAGAAAAGAGA+AGG | + | chr1_4:74117018-74117037 | None:intergenic | 30.0% | |
| TTTGGTGGAAATAATAGTGT+AGG | - | chr1_4:74117062-74117081 | Msa0184500:intron | 30.0% | |
| AAAATGTATGTCCAATATGG+TGG | - | chr1_4:74117123-74117142 | Msa0184500:CDS | 30.0% | |
| ATCTGTACCCTTGAAATATA+AGG | + | chr1_4:74117239-74117258 | None:intergenic | 30.0% | |
| ACTGAATGTTGCAAATGAAT+TGG | - | chr1_4:74117308-74117327 | Msa0184500:intron | 30.0% | |
| !!! | AATTGGAAACAGGTTTTTTG+TGG | - | chr1_4:74117325-74117344 | Msa0184500:intron | 30.0% |
| TCATTTGGGAAGAAATTGTT+TGG | + | chr1_4:74117389-74117408 | None:intergenic | 30.0% | |
| !! | AGTACATTGGTTTCTCATTT+GGG | + | chr1_4:74117403-74117422 | None:intergenic | 30.0% |
| !! | AAGTACATTGGTTTCTCATT+TGG | + | chr1_4:74117404-74117423 | None:intergenic | 30.0% |
| ACACTTGAAAACAAGTACAT+TGG | + | chr1_4:74117416-74117435 | None:intergenic | 30.0% | |
| !!! | TGTACTTGTTTTCAAGTGTA+TGG | - | chr1_4:74117417-74117436 | Msa0184500:intron | 30.0% |
| ATCAACACTAAAGTCTTTGT+AGG | + | chr1_4:74117513-74117532 | None:intergenic | 30.0% | |
| GTTGAAACACATTTAGGAAA+TGG | + | chr1_4:74117554-74117573 | None:intergenic | 30.0% | |
| AACCACAACAAAAAATTGGT+GGG | - | chr1_4:74117571-74117590 | Msa0184500:intron | 30.0% | |
| !! | ATCAGAAAATGGATTATGCT+TGG | - | chr1_4:74117624-74117643 | Msa0184500:intron | 30.0% |
| !! | TCAGAAAATGGATTATGCTT+GGG | - | chr1_4:74117625-74117644 | Msa0184500:intron | 30.0% |
| !!! | CGTCAATCTCTATCTTTTTT+TGG | - | chr1_4:74117910-74117929 | Msa0184500:five_prime_UTR | 30.0% |
| !!! | CAATCTCTATCTTTTTTTGG+TGG | - | chr1_4:74117913-74117932 | Msa0184500:five_prime_UTR | 30.0% |
| GACAATGCATAATATATGCA+AGG | + | chr1_4:74117961-74117980 | None:intergenic | 30.0% | |
| GATAGAGATTTACATGTTCA+TGG | + | chr1_4:74117983-74118002 | None:intergenic | 30.0% | |
| GCATATGATGTTACAACTGT+AGG | - | chr1_4:74115659-74115678 | Msa0184500:three_prime_UTR | 35.0% | |
| TTATTGAACTTCCAAACCTC+GGG | - | chr1_4:74115712-74115731 | Msa0184500:three_prime_UTR | 35.0% | |
| !!! | TTTTGGTTCAAGAGAATGGA+GGG | + | chr1_4:74115762-74115781 | None:intergenic | 35.0% |
| !!! | ATTTTGGTTCAAGAGAATGG+AGG | + | chr1_4:74115763-74115782 | None:intergenic | 35.0% |
| AAGACAACTTCAGCATAATG+TGG | - | chr1_4:74115905-74115924 | Msa0184500:exon | 35.0% | |
| CATCTGTAGAGGTAGTAAAA+TGG | + | chr1_4:74115939-74115958 | None:intergenic | 35.0% | |
| ! | CATTTTACTACCTCTACAGA+TGG | - | chr1_4:74115937-74115956 | Msa0184500:CDS | 35.0% |
| GCATTAAAGTTGAGATTCTG+AGG | - | chr1_4:74116390-74116409 | Msa0184500:intron | 35.0% | |
| ATTGAATGTTTGACAGGATG+TGG | - | chr1_4:74116426-74116445 | Msa0184500:intron | 35.0% | |
| TTGAATGTTTGACAGGATGT+GGG | - | chr1_4:74116427-74116446 | Msa0184500:intron | 35.0% | |
| GTTCAGTATGAAGCTGAAAT+TGG | - | chr1_4:74116482-74116501 | Msa0184500:intron | 35.0% | |
| AGTATGAAGCTGAAATTGGT+AGG | - | chr1_4:74116486-74116505 | Msa0184500:intron | 35.0% | |
| ! | GTGGAGTGTTAACAAGAATA+GGG | - | chr1_4:74116642-74116661 | Msa0184500:intron | 35.0% |
| ! | TGGAGTGTTAACAAGAATAG+GGG | - | chr1_4:74116643-74116662 | Msa0184500:intron | 35.0% |
| TTGCAGATGTGTACAGAAAA+TGG | - | chr1_4:74116670-74116689 | Msa0184500:intron | 35.0% | |
| ATCACACCTATTCTATTCTC+TGG | - | chr1_4:74116839-74116858 | Msa0184500:CDS | 35.0% | |
| AATGAACTTACACTATCTGG+TGG | + | chr1_4:74116870-74116889 | None:intergenic | 35.0% | |
| ! | GCACATCTTTATGCTTTTGT+CGG | - | chr1_4:74116983-74117002 | Msa0184500:intron | 35.0% |
| TTAAACTAGGTCCACCATAT+TGG | + | chr1_4:74117137-74117156 | None:intergenic | 35.0% | |
| ATGTCATATGGACAGTAACA+AGG | - | chr1_4:74117190-74117209 | Msa0184500:CDS | 35.0% | |
| GTTGCAAATGAATTGGAAAC+AGG | - | chr1_4:74117315-74117334 | Msa0184500:intron | 35.0% | |
| TTGTGGATAGAGTTCCAATA+AGG | - | chr1_4:74117342-74117361 | Msa0184500:intron | 35.0% | |
| TGTGGATAGAGTTCCAATAA+GGG | - | chr1_4:74117343-74117362 | Msa0184500:intron | 35.0% | |
| TTGTTCTTGAACACCCTTAT+TGG | + | chr1_4:74117359-74117378 | None:intergenic | 35.0% | |
| TGTATGGAATGCAGATGATT+GGG | - | chr1_4:74117433-74117452 | Msa0184500:intron | 35.0% | |
| GTGGACTTGAAAAAACAAAC+TGG | - | chr1_4:74117465-74117484 | Msa0184500:intron | 35.0% | |
| TCTTTGTAGGATGACACAAA+TGG | + | chr1_4:74117500-74117519 | None:intergenic | 35.0% | |
| !! | TTAGTGTTGATGCTTGTCAA+TGG | - | chr1_4:74117522-74117541 | Msa0184500:intron | 35.0% |
| !! | TAGTGTTGATGCTTGTCAAT+GGG | - | chr1_4:74117523-74117542 | Msa0184500:intron | 35.0% |
| GTTGTGGTTGAAACACATTT+AGG | + | chr1_4:74117560-74117579 | None:intergenic | 35.0% | |
| CAACCACAACAAAAAATTGG+TGG | - | chr1_4:74117570-74117589 | Msa0184500:intron | 35.0% | |
| !!! | ATCCCACCAATTTTTTGTTG+TGG | + | chr1_4:74117576-74117595 | None:intergenic | 35.0% |
| ! | TCTTTCAGGTGATCAGAAAA+TGG | - | chr1_4:74117613-74117632 | Msa0184500:intron | 35.0% |
| TGCAATAGTCATAGATGACA+AGG | + | chr1_4:74117661-74117680 | None:intergenic | 35.0% | |
| !!! | TCTCTATCTTTTTTTGGTGG+TGG | - | chr1_4:74117916-74117935 | Msa0184500:five_prime_UTR | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | + | chr1_4:74117956-74117975 | None:intergenic | 35.0% | |
| ! | TTTGGGTAGGAGGAGAATTT+TGG | + | chr1_4:74115779-74115798 | None:intergenic | 40.0% |
| AATTCTCCTCCTACCCAAAA+TGG | - | chr1_4:74115780-74115799 | Msa0184500:three_prime_UTR | 40.0% | |
| CTCTCATTAGACAATGACAC+AGG | - | chr1_4:74115973-74115992 | Msa0184500:CDS | 40.0% | |
| ATGAAGCTGAAATTGGTAGG+AGG | - | chr1_4:74116489-74116508 | Msa0184500:intron | 40.0% | |
| CTTGTTAACACTCCACCAAT+TGG | + | chr1_4:74116638-74116657 | None:intergenic | 40.0% | |
| ! | GGTGGAGTGTTAACAAGAAT+AGG | - | chr1_4:74116641-74116660 | Msa0184500:intron | 40.0% |
| ATGTGTACAGAAAATGGTGC+AGG | - | chr1_4:74116676-74116695 | Msa0184500:intron | 40.0% | |
| TGTGTACAGAAAATGGTGCA+GGG | - | chr1_4:74116677-74116696 | Msa0184500:intron | 40.0% | |
| !! | GAGTTTTTGGGAAACAGAAC+AGG | - | chr1_4:74116724-74116743 | Msa0184500:intron | 40.0% |
| AATGTGTACAAGAATGGGAC+AGG | - | chr1_4:74116769-74116788 | Msa0184500:intron | 40.0% | |
| GTGAGATGAGACATATGCTT+TGG | - | chr1_4:74116797-74116816 | Msa0184500:CDS | 40.0% | |
| TAGTGTAGGACAAGATTGTG+AGG | - | chr1_4:74117076-74117095 | Msa0184500:intron | 40.0% | |
| GTGTATGGAATGCAGATGAT+TGG | - | chr1_4:74117432-74117451 | Msa0184500:intron | 40.0% | |
| !!! | TTTTTCAAGTCCACCTCTTG+TGG | + | chr1_4:74117459-74117478 | None:intergenic | 40.0% |
| TATGATGCTTGGCATCTTTC+AGG | - | chr1_4:74117599-74117618 | Msa0184500:intron | 40.0% | |
| TCCATGGGAGTAATGTATCA+TGG | - | chr1_4:74117727-74117746 | Msa0184500:CDS | 40.0% | |
| CCATGGGAGTAATGTATCAT+GGG | - | chr1_4:74117728-74117747 | Msa0184500:CDS | 40.0% | |
| CATGGGAGTAATGTATCATG+GGG | - | chr1_4:74117729-74117748 | Msa0184500:CDS | 40.0% | |
| !!! | TATCTTTTTTTGGTGGTGGC+CGG | - | chr1_4:74117920-74117939 | Msa0184500:five_prime_UTR | 40.0% |
| ATGGAGGGATTCTCTACTTC+TGG | + | chr1_4:74115747-74115766 | None:intergenic | 45.0% | |
| TCCTACCCAAAATGGATGGA+GGG | - | chr1_4:74115788-74115807 | Msa0184500:three_prime_UTR | 45.0% | |
| ! | AAGGACCCTCCATCCATTTT+GGG | + | chr1_4:74115796-74115815 | None:intergenic | 45.0% |
| ! | AAAGGACCCTCCATCCATTT+TGG | + | chr1_4:74115797-74115816 | None:intergenic | 45.0% |
| GGCTGCAAGGAAAAGAAGAA+TGG | + | chr1_4:74115830-74115849 | None:intergenic | 45.0% | |
| AGCAGAAGCAGCTATGTCTA+AGG | - | chr1_4:74115873-74115892 | Msa0184500:three_prime_UTR | 45.0% | |
| GCAGAAGCAGCTATGTCTAA+GGG | - | chr1_4:74115874-74115893 | Msa0184500:three_prime_UTR | 45.0% | |
| TAGGTGTGATAGTCCTCAGT+GGG | + | chr1_4:74116829-74116848 | None:intergenic | 45.0% | |
| ATAGGTGTGATAGTCCTCAG+TGG | + | chr1_4:74116830-74116849 | None:intergenic | 45.0% | |
| GGTGGGATCAATATGATGCT+TGG | - | chr1_4:74117588-74117607 | Msa0184500:intron | 45.0% | |
| !! | AAGAGTGCTCATTGAGTCCA+TGG | - | chr1_4:74117711-74117730 | Msa0184500:CDS | 45.0% |
| ! | AGAGTGCTCATTGAGTCCAT+GGG | - | chr1_4:74117712-74117731 | Msa0184500:CDS | 45.0% |
| CCCATGATACATTACTCCCA+TGG | + | chr1_4:74117731-74117750 | None:intergenic | 45.0% | |
| CCTCGTGATCTTAACTCAGT+TGG | + | chr1_4:74118028-74118047 | None:intergenic | 45.0% | |
| CCAACTGAGTTAAGATCACG+AGG | - | chr1_4:74118025-74118044 | Msa0184500:five_prime_UTR | 45.0% | |
| CTCCTCCTACCCAAAATGGA+TGG | - | chr1_4:74115784-74115803 | Msa0184500:three_prime_UTR | 50.0% | |
| !! | CTCCATCCATTTTGGGTAGG+AGG | + | chr1_4:74115789-74115808 | None:intergenic | 50.0% |
| CTCCTACCCAAAATGGATGG+AGG | - | chr1_4:74115787-74115806 | Msa0184500:three_prime_UTR | 50.0% | |
| !! | ACCCTCCATCCATTTTGGGT+AGG | + | chr1_4:74115792-74115811 | None:intergenic | 50.0% |
| AAGCAGCTACTATGGCTGCA+AGG | + | chr1_4:74115843-74115862 | None:intergenic | 50.0% | |
| CCAGATCTGTCCATCTGTAG+AGG | + | chr1_4:74115950-74115969 | None:intergenic | 50.0% | |
| CCTCTACAGATGGACAGATC+TGG | - | chr1_4:74115947-74115966 | Msa0184500:CDS | 50.0% | |
| TTGGTAGGAGGTGATTCTGC+TGG | - | chr1_4:74116501-74116520 | Msa0184500:intron | 50.0% | |
| !! | GCTTTGGTTTGATCCCACTG+AGG | - | chr1_4:74116813-74116832 | Msa0184500:CDS | 50.0% |
| GAGCACTCTTCAGGCAAAGT+TGG | + | chr1_4:74117701-74117720 | None:intergenic | 50.0% | |
| GGACTCAATGAGCACTCTTC+AGG | + | chr1_4:74117710-74117729 | None:intergenic | 50.0% | |
| GGATCTCTGAACCCGAGGTT+TGG | + | chr1_4:74115726-74115745 | None:intergenic | 55.0% | |
| CTTCTGGATCTCTGAACCCG+AGG | + | chr1_4:74115731-74115750 | None:intergenic | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | - | chr1_4:74117443-74117462 | Msa0184500:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr1_4:74117446-74117465 | Msa0184500:intron | 55.0% | |
| AAGGTCCGGAGTTCGAACAC+CGG | + | chr1_4:74117942-74117961 | None:intergenic | 55.0% | |
| GGTGGCCGGTGTTCGAACTC+CGG | - | chr1_4:74117934-74117953 | Msa0184500:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 74115578 | 74118080 | 74115578 | ID=Msa0184500;Name=Msa0184500 |
| chr1_4 | mRNA | 74115578 | 74118080 | 74115578 | ID=Msa0184500-mRNA-1;Parent=Msa0184500;Name=Msa0184500-mRNA-1;_AED=0.12;_eAED=0.12;_QI=221|1|1|1|1|1|4|341|300 |
| chr1_4 | exon | 74115578 | 74116321 | 74115578 | ID=Msa0184500-mRNA-1:exon:25258;Parent=Msa0184500-mRNA-1 |
| chr1_4 | exon | 74116780 | 74116982 | 74116780 | ID=Msa0184500-mRNA-1:exon:25257;Parent=Msa0184500-mRNA-1 |
| chr1_4 | exon | 74117116 | 74117216 | 74117116 | ID=Msa0184500-mRNA-1:exon:25256;Parent=Msa0184500-mRNA-1 |
| chr1_4 | exon | 74117664 | 74118080 | 74117664 | ID=Msa0184500-mRNA-1:exon:25255;Parent=Msa0184500-mRNA-1 |
| chr1_4 | five_prime_UTR | 74117860 | 74118080 | 74117860 | ID=Msa0184500-mRNA-1:five_prime_utr;Parent=Msa0184500-mRNA-1 |
| chr1_4 | CDS | 74117664 | 74117859 | 74117664 | ID=Msa0184500-mRNA-1:cds;Parent=Msa0184500-mRNA-1 |
| chr1_4 | CDS | 74117116 | 74117216 | 74117116 | ID=Msa0184500-mRNA-1:cds;Parent=Msa0184500-mRNA-1 |
| chr1_4 | CDS | 74116780 | 74116982 | 74116780 | ID=Msa0184500-mRNA-1:cds;Parent=Msa0184500-mRNA-1 |
| chr1_4 | CDS | 74115919 | 74116321 | 74115919 | ID=Msa0184500-mRNA-1:cds;Parent=Msa0184500-mRNA-1 |
| chr1_4 | three_prime_UTR | 74115578 | 74115918 | 74115578 | ID=Msa0184500-mRNA-1:three_prime_utr;Parent=Msa0184500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
