Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0989620 | XP_013448908.1 | 83.178 | 428 | 67 | 3 | 29 | 451 | 1 | 428 | 0.0 | 719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0989620 | A0A072UAU5 | 83.178 | 428 | 67 | 3 | 29 | 451 | 1 | 428 | 0.0 | 719 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa0989620 | 0.819083 | 1.398830e-52 | -8.615850e-47 |
| Msa0047110 | Msa0989620 | 0.825635 | 4.210287e-54 | -8.615850e-47 |
| Msa0090320 | Msa0989620 | 0.810266 | 1.255227e-50 | -8.615850e-47 |
| Msa0649110 | Msa0989620 | 0.842939 | 1.903149e-58 | -8.615850e-47 |
| Msa0748970 | Msa0989620 | 0.842586 | 2.362627e-58 | -8.615850e-47 |
| Msa0765910 | Msa0989620 | 0.803359 | 3.619845e-49 | -8.615850e-47 |
| Msa0768290 | Msa0989620 | 0.803970 | 2.703600e-49 | -8.615850e-47 |
| Msa0768370 | Msa0989620 | 0.827070 | 1.916743e-54 | -8.615850e-47 |
| Msa0800210 | Msa0989620 | 0.804005 | 2.658758e-49 | -8.615850e-47 |
| Msa0826320 | Msa0989620 | 0.829879 | 4.020065e-55 | -8.615850e-47 |
| Msa0832340 | Msa0989620 | 0.810488 | 1.124156e-50 | -8.615850e-47 |
| Msa0131770 | Msa0989620 | 0.837749 | 4.325712e-57 | -8.615850e-47 |
| Msa0137640 | Msa0989620 | 0.812308 | 4.526479e-51 | -8.615850e-47 |
| Msa0180500 | Msa0989620 | 0.804346 | 2.257893e-49 | -8.615850e-47 |
| Msa0182740 | Msa0989620 | 0.815339 | 9.726190e-52 | -8.615850e-47 |
| Msa0194440 | Msa0989620 | 0.824800 | 6.633752e-54 | -8.615850e-47 |
| Msa0223910 | Msa0989620 | 0.807719 | 4.406150e-50 | -8.615850e-47 |
| Msa0381610 | Msa0989620 | -0.810230 | 1.278075e-50 | -8.615850e-47 |
| Msa0411390 | Msa0989620 | 0.816723 | 4.773786e-52 | -8.615850e-47 |
| Msa0434000 | Msa0989620 | 0.812359 | 4.410319e-51 | -8.615850e-47 |
| Msa0434180 | Msa0989620 | 0.801069 | 1.071194e-48 | -8.615850e-47 |
| Msa0455760 | Msa0989620 | 0.823721 | 1.189367e-53 | -8.615850e-47 |
| Msa0989620 | Msa0999220 | 0.800538 | 1.375198e-48 | -8.615850e-47 |
| Msa0989620 | Msa1000880 | 0.803031 | 4.233238e-49 | -8.615850e-47 |
| Msa0989620 | Msa1019150 | 0.802125 | 6.507199e-49 | -8.615850e-47 |
| Msa0989620 | Msa1075650 | 0.806858 | 6.707434e-50 | -8.615850e-47 |
| Msa0989620 | Msa1080030 | 0.812840 | 3.462138e-51 | -8.615850e-47 |
| Msa0989620 | Msa1085740 | 0.800264 | 1.564067e-48 | -8.615850e-47 |
| Msa0989620 | Msa1113170 | 0.800417 | 1.455725e-48 | -8.615850e-47 |
| Msa0989620 | Msa1118330 | 0.805521 | 1.282747e-49 | -8.615850e-47 |
| Msa0989620 | Msa1120610 | 0.802800 | 4.723427e-49 | -8.615850e-47 |
| Msa0989620 | Msa1120740 | 0.816996 | 4.145262e-52 | -8.615850e-47 |
| Msa0989620 | Msa1121480 | 0.809731 | 1.636728e-50 | -8.615850e-47 |
| Msa0989620 | Msa1121490 | 0.839474 | 1.551002e-57 | -8.615850e-47 |
| Msa0989620 | Msa1137570 | 0.820980 | 5.148637e-53 | -8.615850e-47 |
| Msa0989620 | Msa1193210 | 0.803116 | 4.065118e-49 | -8.615850e-47 |
| Msa0989620 | Msa1248300 | 0.802990 | 4.315298e-49 | -8.615850e-47 |
| Msa0989620 | Msa1248310 | 0.810590 | 1.068660e-50 | -8.615850e-47 |
| Msa0989620 | Msa1248370 | 0.823083 | 1.676651e-53 | -8.615850e-47 |
| Msa0989620 | Msa1276890 | 0.808094 | 3.667439e-50 | -8.615850e-47 |
| Msa0989620 | Msa1284680 | 0.812208 | 4.759571e-51 | -8.615850e-47 |
| Msa0989620 | Msa1384240 | 0.800705 | 1.271706e-48 | -8.615850e-47 |
| Msa0989620 | Msa1410680 | 0.821477 | 3.955344e-53 | -8.615850e-47 |
| Msa0989620 | Msa1458750 | 0.810001 | 1.431733e-50 | -8.615850e-47 |
| Msa0989620 | Msa1466540 | 0.819354 | 1.213658e-52 | -8.615850e-47 |
| Msa0315940 | Msa0989620 | 0.800108 | 1.682142e-48 | -8.615850e-47 |
| Msa0342750 | Msa0989620 | 0.839923 | 1.185080e-57 | -8.615850e-47 |
| Msa0343850 | Msa0989620 | 0.803878 | 2.824440e-49 | -8.615850e-47 |
| Msa0363530 | Msa0989620 | 0.805743 | 1.151720e-49 | -8.615850e-47 |
| Msa0493000 | Msa0989620 | 0.818484 | 1.913579e-52 | -8.615850e-47 |
| Msa0537720 | Msa0989620 | 0.811846 | 5.707562e-51 | -8.615850e-47 |
| Msa0545700 | Msa0989620 | 0.827287 | 1.700024e-54 | -8.615850e-47 |
| Msa0844490 | Msa0989620 | 0.836855 | 7.326228e-57 | -8.615850e-47 |
| Msa0844570 | Msa0989620 | 0.808223 | 3.442003e-50 | -8.615850e-47 |
| Msa0849030 | Msa0989620 | 0.800325 | 1.519574e-48 | -8.615850e-47 |
| Msa0897330 | Msa0989620 | 0.801080 | 1.065906e-48 | -8.615850e-47 |
| Msa0899430 | Msa0989620 | 0.803695 | 3.083516e-49 | -8.615850e-47 |
| Msa0901020 | Msa0989620 | 0.806392 | 8.410324e-50 | -8.615850e-47 |
| Msa0901070 | Msa0989620 | 0.835311 | 1.806719e-56 | -8.615850e-47 |
| Msa0925250 | Msa0989620 | 0.812848 | 3.448990e-51 | -8.615850e-47 |
| Msa0925290 | Msa0989620 | 0.832497 | 9.141385e-56 | -8.615850e-47 |
| Msa0927380 | Msa0989620 | 0.845145 | 4.873531e-59 | -8.615850e-47 |
| Msa0927390 | Msa0989620 | 0.804230 | 2.387096e-49 | -8.615850e-47 |
| Msa0943190 | Msa0989620 | 0.813669 | 2.277222e-51 | -8.615850e-47 |
| Msa0958550 | Msa0989620 | 0.800127 | 1.667483e-48 | -8.615850e-47 |
| Msa0964900 | Msa0989620 | 0.812115 | 4.985622e-51 | -8.615850e-47 |
| Msa0967280 | Msa0989620 | 0.845278 | 4.486541e-59 | -8.615850e-47 |
| Msa0969520 | Msa0989620 | 0.816512 | 5.322703e-52 | -8.615850e-47 |
| Msa0974080 | Msa0989620 | 0.827613 | 1.420083e-54 | -8.615850e-47 |
| Msa0976670 | Msa0989620 | 0.817681 | 2.907447e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0989620 | MtrunA17_Chr7g0239151 | 83.178 | 428 | 67 | 3 | 29 | 451 | 1 | 428 | 0.0 | 719 |
| Msa0989620 | MtrunA17_Chr6g0471711 | 93.701 | 127 | 8 | 0 | 179 | 305 | 1 | 127 | 2.12e-80 | 244 |
| Msa0989620 | MtrunA17_Chr6g0471701 | 81.081 | 111 | 19 | 1 | 343 | 451 | 2 | 112 | 3.53e-56 | 181 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0989620 | AT5G02130.1 | 41.558 | 385 | 201 | 8 | 76 | 451 | 51 | 420 | 3.66e-83 | 262 |
Find 105 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATTATCCGACTCTTTA+TGG | 0.085192 | 6_4:+46801570 | Msa0989620:CDS |
| TTACCTTCAGATTCAGTTTC+AGG | 0.187955 | 6_4:-46799829 | None:intergenic |
| CCTTTGGAATTCTCGTGTTT+TGG | 0.212329 | 6_4:-46797417 | None:intergenic |
| AGTACTTTAATCAATGGATT+AGG | 0.230791 | 6_4:+46801948 | Msa0989620:three_prime_UTR |
| GGCTGTTGTCTTAACAAATA+TGG | 0.276637 | 6_4:+46798759 | Msa0989620:CDS |
| ATTCGTGCTAGAGCAATTAA+AGG | 0.284594 | 6_4:+46797987 | Msa0989620:CDS |
| TCTTAACAAATATGGCTCTT+AGG | 0.295090 | 6_4:+46798767 | Msa0989620:CDS |
| CTATTAACCCAACAAATTAA+AGG | 0.295727 | 6_4:+46796842 | Msa0989620:CDS |
| TATCTTGCTGCCGAAGGTTT+AGG | 0.301940 | 6_4:+46801707 | Msa0989620:three_prime_UTR |
| TTGTTGATGCTCGTATTTGC+AGG | 0.319544 | 6_4:+46801654 | Msa0989620:CDS |
| TGCAGACGAGTATTTGAAAA+AGG | 0.332065 | 6_4:+46798563 | Msa0989620:CDS |
| GTACTTTAATCAATGGATTA+GGG | 0.333542 | 6_4:+46801949 | Msa0989620:three_prime_UTR |
| AATGAAATACGGGAGGGTTT+TGG | 0.341255 | 6_4:-46796974 | None:intergenic |
| TCATGTACATATCATTTCTA+AGG | 0.353972 | 6_4:+46801839 | Msa0989620:three_prime_UTR |
| GTGTATAATGACACGGAAAA+TGG | 0.354361 | 6_4:+46801861 | Msa0989620:three_prime_UTR |
| TGGCTCCTTCTAAGACATTC+TGG | 0.355238 | 6_4:-46798317 | None:intergenic |
| GGGAAATCGGAAATGACTTA+TGG | 0.355807 | 6_4:+46796808 | Msa0989620:exon |
| AGGACAACTTGAATCACATT+TGG | 0.357213 | 6_4:+46798425 | Msa0989620:CDS |
| GGACAACTTGAATCACATTT+GGG | 0.359069 | 6_4:+46798426 | Msa0989620:CDS |
| CATAGATGGTTTAATGTTGC+AGG | 0.360888 | 6_4:+46798389 | Msa0989620:CDS |
| TGTTATGATGGCAAATACTA+TGG | 0.363305 | 6_4:+46801807 | Msa0989620:three_prime_UTR |
| ACTATGGCAAATCAGATCTA+TGG | 0.379669 | 6_4:+46798591 | Msa0989620:CDS |
| TATATTAGTACTTTAATCAA+TGG | 0.383590 | 6_4:+46801942 | Msa0989620:three_prime_UTR |
| CGTTGGTTGAAGTAGTGATT+TGG | 0.392541 | 6_4:-46796888 | None:intergenic |
| GTCACGTTCGCTTGTGGTTG+AGG | 0.395009 | 6_4:+46798810 | Msa0989620:CDS |
| ATTTACCAGAATGTCTTAGA+AGG | 0.400459 | 6_4:+46798312 | Msa0989620:CDS |
| CGCGGTAAAGAGAAATGATA+TGG | 0.402471 | 6_4:+46800890 | Msa0989620:CDS |
| AGAATTGAGTAATTCTTACT+TGG | 0.410283 | 6_4:+46797633 | Msa0989620:CDS |
| TTGCAGGCCATGTTTGCTAT+AGG | 0.416333 | 6_4:+46798405 | Msa0989620:CDS |
| TAGTTGGATCGTACGGTATC+GGG | 0.421386 | 6_4:+46797343 | Msa0989620:intron |
| AGCGAGCAAAGCAATTCCTT+TGG | 0.430752 | 6_4:-46797433 | None:intergenic |
| GACACGGAAAATGGTGACTA+TGG | 0.431524 | 6_4:+46801870 | Msa0989620:three_prime_UTR |
| TCAGATTCAGTTTCAGGTGG+TGG | 0.435100 | 6_4:-46799823 | None:intergenic |
| AGAATGATCTGAATGAAATA+CGG | 0.436849 | 6_4:-46796985 | None:intergenic |
| TTGCAGTTAAAATGTTATGA+TGG | 0.438698 | 6_4:+46801795 | Msa0989620:three_prime_UTR |
| AGATGTTCTGCCTAGCTTGT+TGG | 0.439139 | 6_4:-46798275 | None:intergenic |
| GCCTCTTTCTTTAAGTTCAG+TGG | 0.442276 | 6_4:-46798337 | None:intergenic |
| TAGCTGCTGTTGATGTTGTT+CGG | 0.444446 | 6_4:+46797035 | Msa0989620:CDS |
| ACTACTAAGTGCCCTAGAAA+AGG | 0.449730 | 6_4:+46801529 | Msa0989620:CDS |
| CGGAGAGATTTGTCAAAGAA+AGG | 0.453172 | 6_4:-46798134 | None:intergenic |
| GGAAATCGGAAATGACTTAT+GGG | 0.462533 | 6_4:+46796809 | Msa0989620:exon |
| GTTAAGACAACAGCCAGCTT+GGG | 0.463437 | 6_4:-46798751 | None:intergenic |
| GTGACAGAAACAAGAGCTCT+TGG | 0.464733 | 6_4:-46796950 | None:intergenic |
| ATAGTTGGATCGTACGGTAT+CGG | 0.465531 | 6_4:+46797342 | Msa0989620:intron |
| ATAGTAGTAATATCCATTGT+TGG | 0.469267 | 6_4:+46801918 | Msa0989620:three_prime_UTR |
| GGCTGGACTTTATCTAGAGT+TGG | 0.473070 | 6_4:+46797793 | Msa0989620:CDS |
| TGTTAAGACAACAGCCAGCT+TGG | 0.477279 | 6_4:-46798752 | None:intergenic |
| CAGATTCAGTTTCAGGTGGT+GGG | 0.481621 | 6_4:-46799822 | None:intergenic |
| GAAAGAGGCAATATATACTT+AGG | 0.489316 | 6_4:+46798351 | Msa0989620:CDS |
| TTCGTGCTAGAGCAATTAAA+GGG | 0.492505 | 6_4:+46797988 | Msa0989620:CDS |
| ACTTTATCTAGAGTTGGAAC+AGG | 0.495921 | 6_4:+46797799 | Msa0989620:CDS |
| GCTGCTTATCTTGCTGCCGA+AGG | 0.495987 | 6_4:+46801701 | Msa0989620:three_prime_UTR |
| GGTGGTAACATGAACATAGA+TGG | 0.500627 | 6_4:+46798375 | Msa0989620:CDS |
| TCATTCAGATCATTCTACTC+TGG | 0.506948 | 6_4:+46796992 | Msa0989620:CDS |
| CTACTAAGTGCCCTAGAAAA+GGG | 0.511518 | 6_4:+46801530 | Msa0989620:CDS |
| GTGAAGGGAGATATTAAGTC+AGG | 0.515333 | 6_4:+46798023 | Msa0989620:CDS |
| GTGTGAATAGTTGGATCGTA+CGG | 0.519017 | 6_4:+46797336 | Msa0989620:intron |
| TTGCTGCCGAAGGTTTAGGT+TGG | 0.525738 | 6_4:+46801711 | Msa0989620:three_prime_UTR |
| AATACTCCAACCTAAACCTT+CGG | 0.527379 | 6_4:-46801717 | None:intergenic |
| GAAAATTAGTTCTTGGTGTG+TGG | 0.529025 | 6_4:+46801769 | Msa0989620:three_prime_UTR |
| AGTTGCTGCATATGAAGCTC+AGG | 0.531432 | 6_4:+46797772 | Msa0989620:intron |
| ATATCATTTCTCTTTACCGC+GGG | 0.542493 | 6_4:-46800888 | None:intergenic |
| GCCACTGAACTTAAAGAAAG+AGG | 0.543902 | 6_4:+46798336 | Msa0989620:CDS |
| AGGGCTCATTGAACTTGTGA+AGG | 0.545076 | 6_4:+46798007 | Msa0989620:CDS |
| AAAGTTACCACAGCATAGCT+TGG | 0.559676 | 6_4:-46798159 | None:intergenic |
| TGATAAATGCATTGAGCTTG+TGG | 0.561303 | 6_4:+46797929 | Msa0989620:CDS |
| GAAGCTATGCGAAACATCGT+TGG | 0.562600 | 6_4:-46796905 | None:intergenic |
| GAATGATCTGAATGAAATAC+GGG | 0.563876 | 6_4:-46796984 | None:intergenic |
| GCTGCATATGAAGCTCAGGC+TGG | 0.564232 | 6_4:+46797776 | Msa0989620:CDS |
| GAATTGAGTAATTCTTACTT+GGG | 0.564715 | 6_4:+46797634 | Msa0989620:CDS |
| TACAGAAGCAAGTATATGTA+CGG | 0.566251 | 6_4:+46801631 | Msa0989620:CDS |
| ATGCAGAGTTCCAACAAGCT+AGG | 0.569554 | 6_4:+46798265 | Msa0989620:CDS |
| GCAGAAGTCACGTTCGCTTG+TGG | 0.570293 | 6_4:+46798804 | Msa0989620:CDS |
| GAAATCGGAAATGACTTATG+GGG | 0.575406 | 6_4:+46796810 | Msa0989620:exon |
| GGCAATATATACTTAGGAGG+TGG | 0.580448 | 6_4:+46798357 | Msa0989620:CDS |
| AATTCTTACTTGGGAATCAG+AGG | 0.585999 | 6_4:+46797643 | Msa0989620:CDS |
| CAGATCATTCTACTCTGGTG+TGG | 0.587706 | 6_4:+46796997 | Msa0989620:CDS |
| AGTGCCCTAGAAAAGGGTGC+AGG | 0.601171 | 6_4:+46801536 | Msa0989620:CDS |
| ACGTTCGCTTGTGGTTGAGG+AGG | 0.603359 | 6_4:+46798813 | Msa0989620:CDS |
| GGGCTCATTGAACTTGTGAA+GGG | 0.604228 | 6_4:+46798008 | Msa0989620:CDS |
| CCTTCAGATTCAGTTTCAGG+TGG | 0.608386 | 6_4:-46799826 | None:intergenic |
| AAATGATATGTACATGACGA+TGG | 0.615737 | 6_4:-46801833 | None:intergenic |
| AATACTCGTCTGCATTAGAG+AGG | 0.616115 | 6_4:-46798554 | None:intergenic |
| AGAGGCAATATATACTTAGG+AGG | 0.618466 | 6_4:+46798354 | Msa0989620:CDS |
| AAGTTGTCCTATAGCAAACA+TGG | 0.619340 | 6_4:-46798412 | None:intergenic |
| CTTACAACTGAGTTAACCCA+AGG | 0.620525 | 6_4:+46797387 | Msa0989620:CDS |
| TTCTAAGGTGTATAATGACA+CGG | 0.622456 | 6_4:+46801854 | Msa0989620:three_prime_UTR |
| CATATCATTTCTCTTTACCG+CGG | 0.626123 | 6_4:-46800889 | None:intergenic |
| GATGCAATTGAGAAGCTCAA+TGG | 0.627200 | 6_4:+46797604 | Msa0989620:CDS |
| CTCCGCACCAAGCTATGCTG+TGG | 0.627492 | 6_4:+46798152 | Msa0989620:CDS |
| AGTACTAATATATCCAACAA+TGG | 0.628655 | 6_4:-46801931 | None:intergenic |
| CCACCTGAAACTGAATCTGA+AGG | 0.631124 | 6_4:+46799826 | Msa0989620:CDS |
| TGATCTGAATGAAATACGGG+AGG | 0.631844 | 6_4:-46796981 | None:intergenic |
| AATATGCTTTGAGAGAAGCT+AGG | 0.632769 | 6_4:+46797065 | Msa0989620:CDS |
| CCAAAACACGAGAATTCCAA+AGG | 0.633400 | 6_4:+46797417 | Msa0989620:CDS |
| AGGTGCTGCAGCTAAACCCG+CGG | 0.636683 | 6_4:+46800872 | Msa0989620:intron |
| ATAGGATGATATGGCATCTG+CGG | 0.640917 | 6_4:+46797902 | Msa0989620:intron |
| GATCTGAATGAAATACGGGA+GGG | 0.653293 | 6_4:-46796980 | None:intergenic |
| GGATGATATGGCATCTGCGG+TGG | 0.655807 | 6_4:+46797905 | Msa0989620:intron |
| TACCACAGCATAGCTTGGTG+CGG | 0.659417 | 6_4:-46798154 | None:intergenic |
| GGTAAAGAGAAATGATATGG+TGG | 0.671062 | 6_4:+46800893 | Msa0989620:CDS |
| AAATCGGAAATGACTTATGG+GGG | 0.676194 | 6_4:+46796811 | Msa0989620:exon |
| GACAACTTGAATCACATTTG+GGG | 0.682044 | 6_4:+46798427 | Msa0989620:CDS |
| CTCTGCATACGATAGAGCAG+CGG | 0.683917 | 6_4:-46798250 | None:intergenic |
| GATATGGTGGCTCTTGCAAG+TGG | 0.709057 | 6_4:+46800906 | Msa0989620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTTTTTATCAAAATT+TGG | + | chr6_4:46797115-46797134 | Msa0989620:intron | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+TGG | - | chr6_4:46801135-46801154 | None:intergenic | 10.0% |
| !!! | TCTTTTTCATAAATATTAAA+TGG | + | chr6_4:46801296-46801315 | Msa0989620:intron | 10.0% |
| !!! | AATCAAAATAAAACTTTTAC+AGG | + | chr6_4:46796785-46796804 | Msa0989620:five_prime_UTR | 15.0% |
| !!! | ATCAAAATAAAACTTTTACA+GGG | + | chr6_4:46796786-46796805 | Msa0989620:five_prime_UTR | 15.0% |
| !!! | TTTCAAATTTAACATCTTTT+TGG | + | chr6_4:46797175-46797194 | Msa0989620:intron | 15.0% |
| !!! | TTTTTGGTTTTTATTTTATG+AGG | + | chr6_4:46797191-46797210 | Msa0989620:intron | 15.0% |
| !!! | TGTTTTATTAATTCTCATTT+TGG | + | chr6_4:46797506-46797525 | Msa0989620:intron | 15.0% |
| !!! | TGAATTTATTTTTCGTATAT+AGG | + | chr6_4:46797884-46797903 | Msa0989620:intron | 15.0% |
| !! | TTAAAAAGAAACATTTCATA+AGG | - | chr6_4:46798479-46798498 | None:intergenic | 15.0% |
| !! | TTAATCCAAAAATATTAAAG+CGG | + | chr6_4:46798924-46798943 | Msa0989620:intron | 15.0% |
| !! | TTATTTACTAATAAGTTGTT+AGG | + | chr6_4:46798949-46798968 | Msa0989620:intron | 15.0% |
| !!! | ATTTTATCAGGAAAAAATAT+AGG | + | chr6_4:46799041-46799060 | Msa0989620:intron | 15.0% |
| !! | GTAAAATCATTATAAATACA+AGG | + | chr6_4:46799304-46799323 | Msa0989620:intron | 15.0% |
| !!! | CTTTGGTTTTTTTTTTTTTT+GGG | - | chr6_4:46799667-46799686 | None:intergenic | 15.0% |
| !!! | TCTTTGGTTTTTTTTTTTTT+TGG | - | chr6_4:46799668-46799687 | None:intergenic | 15.0% |
| !! | TATGTTAGATATAAAATCTT+CGG | + | chr6_4:46800286-46800305 | Msa0989620:intron | 15.0% |
| !! | AAAAGATATATATGTAGATA+GGG | - | chr6_4:46800630-46800649 | None:intergenic | 15.0% |
| !! | AAAAAGATATATATGTAGAT+AGG | - | chr6_4:46800631-46800650 | None:intergenic | 15.0% |
| !! | TCAATACTGAATTAAATAAA+TGG | - | chr6_4:46800833-46800852 | None:intergenic | 15.0% |
| !! | AAAAAAATGTAACATTGTAT+GGG | - | chr6_4:46801454-46801473 | None:intergenic | 15.0% |
| !! | AAAAAAAATGTAACATTGTA+TGG | - | chr6_4:46801455-46801474 | None:intergenic | 15.0% |
| !! | TATATTAGTACTTTAATCAA+TGG | + | chr6_4:46801942-46801961 | Msa0989620:three_prime_UTR | 15.0% |
| !!! | TCAAAATAAAACTTTTACAG+GGG | + | chr6_4:46796787-46796806 | Msa0989620:five_prime_UTR | 20.0% |
| !!! | ACTTTTTCCTTTAATTTGTT+GGG | - | chr6_4:46796852-46796871 | None:intergenic | 20.0% |
| !!! | TGTTCAAAATTAACGATTTT+TGG | + | chr6_4:46797240-46797259 | Msa0989620:intron | 20.0% |
| !!! | GTTCAAAATTAACGATTTTT+GGG | + | chr6_4:46797241-46797260 | Msa0989620:intron | 20.0% |
| !! | TTCTCACTAAAAATAAAAAG+AGG | - | chr6_4:46797721-46797740 | None:intergenic | 20.0% |
| !! | ATAAATTCAGATAAACACAA+TGG | - | chr6_4:46797873-46797892 | None:intergenic | 20.0% |
| !! | TCAAATGATATATCTCTAAT+AGG | + | chr6_4:46798510-46798529 | Msa0989620:intron | 20.0% |
| !! | AAAACTATCATAGAACAAAT+GGG | - | chr6_4:46798905-46798924 | None:intergenic | 20.0% |
| !! | AAAAACTATCATAGAACAAA+TGG | - | chr6_4:46798906-46798925 | None:intergenic | 20.0% |
| !! | TAATCCAAAAATATTAAAGC+GGG | + | chr6_4:46798925-46798944 | Msa0989620:intron | 20.0% |
| !! | ATCTTTAGATATTCCTTTAA+TGG | + | chr6_4:46799193-46799212 | Msa0989620:intron | 20.0% |
| !!! | ATATTTTTACAGAAACCTTA+TGG | + | chr6_4:46799371-46799390 | Msa0989620:intron | 20.0% |
| !!! | TTCTTAGTTTTAATGTTACA+AGG | - | chr6_4:46799510-46799529 | None:intergenic | 20.0% |
| !! | ATTGAATTGAAAGAAAACTT+AGG | - | chr6_4:46799737-46799756 | None:intergenic | 20.0% |
| !! | ATTCAATTAGTAATTGTAAC+TGG | + | chr6_4:46799750-46799769 | Msa0989620:intron | 20.0% |
| !! | TCTTATAGATATAGATAAGT+GGG | - | chr6_4:46799883-46799902 | None:intergenic | 20.0% |
| !! | ATCTTATAGATATAGATAAG+TGG | - | chr6_4:46799884-46799903 | None:intergenic | 20.0% |
| !! | AGATATTTACACAATTAGTT+AGG | + | chr6_4:46799900-46799919 | Msa0989620:intron | 20.0% |
| !! | GATATTTACACAATTAGTTA+GGG | + | chr6_4:46799901-46799920 | Msa0989620:intron | 20.0% |
| !! | ACTATATCTACATATATAGA+GGG | + | chr6_4:46800398-46800417 | Msa0989620:intron | 20.0% |
| !!! | TTTACCATTTTTTCTATGAT+TGG | + | chr6_4:46800785-46800804 | Msa0989620:intron | 20.0% |
| !! | ATACTGAATTAAATAAATGG+TGG | - | chr6_4:46800830-46800849 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAAAATTAGTTCT+TGG | + | chr6_4:46801762-46801781 | Msa0989620:three_prime_UTR | 20.0% |
| !! | CAAAATAAAACTTTTACAGG+GGG | + | chr6_4:46796788-46796807 | Msa0989620:five_prime_UTR | 25.0% |
| ! | CTATTAACCCAACAAATTAA+AGG | + | chr6_4:46796842-46796861 | Msa0989620:CDS | 25.0% |
| !!! | GACTTTTTCCTTTAATTTGT+TGG | - | chr6_4:46796853-46796872 | None:intergenic | 25.0% |
| ! | AGAATGATCTGAATGAAATA+CGG | - | chr6_4:46796988-46797007 | None:intergenic | 25.0% |
| ! | TTTGAACAAAACACACAATT+GGG | - | chr6_4:46797228-46797247 | None:intergenic | 25.0% |
| !! | TTTTGAACAAAACACACAAT+TGG | - | chr6_4:46797229-46797248 | None:intergenic | 25.0% |
| ! | TTTGAACAAAACACACAAAA+GGG | - | chr6_4:46797279-46797298 | None:intergenic | 25.0% |
| !!! | CTAACATCTTTTTGGTTTTT+TGG | + | chr6_4:46797300-46797319 | Msa0989620:intron | 25.0% |
| !!! | TTTGTTTTTGTGTGAATAGT+TGG | + | chr6_4:46797327-46797346 | Msa0989620:intron | 25.0% |
| !! | TTTCCTTAAAATTTTGCTAG+AGG | + | chr6_4:46797571-46797590 | Msa0989620:intron | 25.0% |
| ! | AGAATTGAGTAATTCTTACT+TGG | + | chr6_4:46797633-46797652 | Msa0989620:CDS | 25.0% |
| ! | GAATTGAGTAATTCTTACTT+GGG | + | chr6_4:46797634-46797653 | Msa0989620:CDS | 25.0% |
| !! | TTTTCGTATATAGGATGATA+TGG | + | chr6_4:46797893-46797912 | Msa0989620:intron | 25.0% |
| ! | TGTTCTGTAAATTGTAATGT+AGG | + | chr6_4:46798225-46798244 | Msa0989620:intron | 25.0% |
| !! | TGAACTTTTAAATTGAGTTC+AGG | - | chr6_4:46798650-46798669 | None:intergenic | 25.0% |
| ! | AAACTATCATAGAACAAATG+GGG | - | chr6_4:46798904-46798923 | None:intergenic | 25.0% |
| !! | TAATCCCGCTTTAATATTTT+TGG | - | chr6_4:46798932-46798951 | None:intergenic | 25.0% |
| ! | AATTGAAAGAAAACTTAGGT+GGG | - | chr6_4:46799733-46799752 | None:intergenic | 25.0% |
| !! | CTATGAGTGTCTTTAATTTA+AGG | + | chr6_4:46800211-46800230 | Msa0989620:intron | 25.0% |
| ! | TGAGAGATAAAAAACTATGA+GGG | - | chr6_4:46800320-46800339 | None:intergenic | 25.0% |
| ! | TTGAGAGATAAAAAACTATG+AGG | - | chr6_4:46800321-46800340 | None:intergenic | 25.0% |
| ! | TGAAACCATAATGTTTATCA+TGG | + | chr6_4:46800375-46800394 | Msa0989620:intron | 25.0% |
| ! | ATAGTCCATGATAAACATTA+TGG | - | chr6_4:46800383-46800402 | None:intergenic | 25.0% |
| ! | GACTATATCTACATATATAG+AGG | + | chr6_4:46800397-46800416 | Msa0989620:intron | 25.0% |
| ! | CTATATCTACATATATAGAG+GGG | + | chr6_4:46800399-46800418 | Msa0989620:intron | 25.0% |
| ! | ATAGATTATAAGTGTGTGTT+TGG | - | chr6_4:46801193-46801212 | None:intergenic | 25.0% |
| ! | ACTTATAATCTATGATGACT+GGG | + | chr6_4:46801200-46801219 | Msa0989620:intron | 25.0% |
| ! | AAAGACATTCTTTAGTAATG+TGG | + | chr6_4:46801428-46801447 | Msa0989620:intron | 25.0% |
| ! | TTGCAGTTAAAATGTTATGA+TGG | + | chr6_4:46801795-46801814 | Msa0989620:three_prime_UTR | 25.0% |
| ! | TCATGTACATATCATTTCTA+AGG | + | chr6_4:46801839-46801858 | Msa0989620:three_prime_UTR | 25.0% |
| ! | ATAGTAGTAATATCCATTGT+TGG | + | chr6_4:46801918-46801937 | Msa0989620:three_prime_UTR | 25.0% |
| ! | AGTACTAATATATCCAACAA+TGG | - | chr6_4:46801934-46801953 | None:intergenic | 25.0% |
| !! | AGTACTTTAATCAATGGATT+AGG | + | chr6_4:46801948-46801967 | Msa0989620:three_prime_UTR | 25.0% |
| !!! | GTACTTTAATCAATGGATTA+GGG | + | chr6_4:46801949-46801968 | Msa0989620:three_prime_UTR | 25.0% |
| GAATGATCTGAATGAAATAC+GGG | - | chr6_4:46796987-46797006 | None:intergenic | 30.0% | |
| CTTTGAACAAAACACACAAA+AGG | - | chr6_4:46797280-46797299 | None:intergenic | 30.0% | |
| ! | GTTCAAAGCTAACATCTTTT+TGG | + | chr6_4:46797292-46797311 | Msa0989620:intron | 30.0% |
| !!! | CATCTTTTTGGTTTTTTGGT+TGG | + | chr6_4:46797304-46797323 | Msa0989620:intron | 30.0% |
| !! | TGTCTACATTGTTTTGTGAA+AGG | + | chr6_4:46797457-46797476 | Msa0989620:CDS | 30.0% |
| ! | TCTCCTCTAGCAAAATTTTA+AGG | - | chr6_4:46797577-46797596 | None:intergenic | 30.0% |
| AATGCAGTAAACAACAAAAG+AGG | - | chr6_4:46797683-46797702 | None:intergenic | 30.0% | |
| !!! | GAATTTTTTTCAGTGTGTCT+TGG | + | chr6_4:46797738-46797757 | Msa0989620:intron | 30.0% |
| ! | GCTAGTTGATGTAAATTACT+TGG | + | chr6_4:46797831-46797850 | Msa0989620:intron | 30.0% |
| ! | ACAATGGTTCTGTAAAAAAG+CGG | - | chr6_4:46797857-46797876 | None:intergenic | 30.0% |
| ATTTACCAGAATGTCTTAGA+AGG | + | chr6_4:46798312-46798331 | Msa0989620:CDS | 30.0% | |
| GAAAGAGGCAATATATACTT+AGG | + | chr6_4:46798351-46798370 | Msa0989620:CDS | 30.0% | |
| !! | GTAGGCTTAATGTTTTTGTA+TGG | + | chr6_4:46798449-46798468 | Msa0989620:intron | 30.0% |
| TAGGTAATAACTTCTGCTTT+AGG | + | chr6_4:46798529-46798548 | Msa0989620:intron | 30.0% | |
| TCTTAACAAATATGGCTCTT+AGG | + | chr6_4:46798767-46798786 | Msa0989620:CDS | 30.0% | |
| CAGGAAAAAATATAGGAATG+TGG | + | chr6_4:46799048-46799067 | Msa0989620:intron | 30.0% | |
| GGAGTAATAACAATCAATCT+AGG | - | chr6_4:46799227-46799246 | None:intergenic | 30.0% | |
| TTTACAGAAACCTTATGGTT+TGG | + | chr6_4:46799376-46799395 | Msa0989620:intron | 30.0% | |
| ! | GACATTGCATTTTATATGCA+AGG | + | chr6_4:46799565-46799584 | Msa0989620:intron | 30.0% |
| ! | TTGCATTTTATATGCAAGGT+CGG | + | chr6_4:46799569-46799588 | Msa0989620:intron | 30.0% |
| AAGTTTAAGTGAGACATCTT+TGG | - | chr6_4:46799684-46799703 | None:intergenic | 30.0% | |
| ATTGAAAGAAAACTTAGGTG+GGG | - | chr6_4:46799732-46799751 | None:intergenic | 30.0% | |
| GAATTGAAAGAAAACTTAGG+TGG | - | chr6_4:46799734-46799753 | None:intergenic | 30.0% | |
| CAAGTCTAGAAAAATAGAAC+AGG | - | chr6_4:46800183-46800202 | None:intergenic | 30.0% | |
| !! | CTGTTCTATTTTTCTAGACT+TGG | + | chr6_4:46800181-46800200 | Msa0989620:intron | 30.0% |
| !!! | TCTCTCAATAGCGTTTTTTA+AGG | + | chr6_4:46800333-46800352 | Msa0989620:intron | 30.0% |
| !!! | CTCTCAATAGCGTTTTTTAA+GGG | + | chr6_4:46800334-46800353 | Msa0989620:intron | 30.0% |
| TTCAATACATGAAATGGTCA+TGG | + | chr6_4:46800474-46800493 | Msa0989620:intron | 30.0% | |
| TCAATACATGAAATGGTCAT+GGG | + | chr6_4:46800475-46800494 | Msa0989620:intron | 30.0% | |
| ! | TTTTCTAGATATCTCTTGCT+AGG | + | chr6_4:46800649-46800668 | Msa0989620:intron | 30.0% |
| ! | GGTCTATAGATAGGTTTTTA+TGG | + | chr6_4:46800670-46800689 | Msa0989620:intron | 30.0% |
| AGCTCCAATCATAGAAAAAA+TGG | - | chr6_4:46800792-46800811 | None:intergenic | 30.0% | |
| AAACTTAACTTTCTTTGTGC+AGG | + | chr6_4:46800852-46800871 | Msa0989620:intron | 30.0% | |
| CACTTATAATCTATGATGAC+TGG | + | chr6_4:46801199-46801218 | Msa0989620:intron | 30.0% | |
| GATACATATCTTACTGCATA+TGG | + | chr6_4:46801343-46801362 | Msa0989620:intron | 30.0% | |
| ATGGTATAAGAGAAATGCTT+AGG | + | chr6_4:46801362-46801381 | Msa0989620:intron | 30.0% | |
| TATAAGAGAAATGCTTAGGT+GGG | + | chr6_4:46801366-46801385 | Msa0989620:intron | 30.0% | |
| ATATTGAGCAACTAGTCAAA+TGG | - | chr6_4:46801491-46801510 | None:intergenic | 30.0% | |
| ! | GACTAGTTGCTCAATATTAT+AGG | + | chr6_4:46801494-46801513 | Msa0989620:intron | 30.0% |
| TAGTTGCTCAATATTATAGG+TGG | + | chr6_4:46801497-46801516 | Msa0989620:intron | 30.0% | |
| AGAAATTATCCGACTCTTTA+TGG | + | chr6_4:46801570-46801589 | Msa0989620:CDS | 30.0% | |
| !!! | GTTGTTTTTCCATAAAGAGT+CGG | - | chr6_4:46801582-46801601 | None:intergenic | 30.0% |
| ACTCTTTATGGAAAAACAAC+AGG | + | chr6_4:46801582-46801601 | Msa0989620:CDS | 30.0% | |
| TACAGAAGCAAGTATATGTA+CGG | + | chr6_4:46801631-46801650 | Msa0989620:CDS | 30.0% | |
| TGTTATGATGGCAAATACTA+TGG | + | chr6_4:46801807-46801826 | Msa0989620:three_prime_UTR | 30.0% | |
| AAATGATATGTACATGACGA+TGG | - | chr6_4:46801836-46801855 | None:intergenic | 30.0% | |
| !! | TTCTAAGGTGTATAATGACA+CGG | + | chr6_4:46801854-46801873 | Msa0989620:three_prime_UTR | 30.0% |
| ! | AAACTTTTACAGGGGGAAAT+CGG | + | chr6_4:46796795-46796814 | Msa0989620:five_prime_UTR | 35.0% |
| GGAAATCGGAAATGACTTAT+GGG | + | chr6_4:46796809-46796828 | Msa0989620:exon | 35.0% | |
| GAAATCGGAAATGACTTATG+GGG | + | chr6_4:46796810-46796829 | Msa0989620:exon | 35.0% | |
| AAATCGGAAATGACTTATGG+GGG | + | chr6_4:46796811-46796830 | Msa0989620:exon | 35.0% | |
| TCATTCAGATCATTCTACTC+TGG | + | chr6_4:46796992-46797011 | Msa0989620:CDS | 35.0% | |
| !! | AATATGCTTTGAGAGAAGCT+AGG | + | chr6_4:46797065-46797084 | Msa0989620:CDS | 35.0% |
| !! | GTGTTTTGGATCATTTCCTT+GGG | - | chr6_4:46797406-46797425 | None:intergenic | 35.0% |
| AATTCTTACTTGGGAATCAG+AGG | + | chr6_4:46797643-46797662 | Msa0989620:CDS | 35.0% | |
| ! | ACTTTATCTAGAGTTGGAAC+AGG | + | chr6_4:46797799-46797818 | Msa0989620:CDS | 35.0% |
| TGATAAATGCATTGAGCTTG+TGG | + | chr6_4:46797929-46797948 | Msa0989620:CDS | 35.0% | |
| ATTCGTGCTAGAGCAATTAA+AGG | + | chr6_4:46797987-46798006 | Msa0989620:CDS | 35.0% | |
| TTCGTGCTAGAGCAATTAAA+GGG | + | chr6_4:46797988-46798007 | Msa0989620:CDS | 35.0% | |
| AGAGGCAATATATACTTAGG+AGG | + | chr6_4:46798354-46798373 | Msa0989620:CDS | 35.0% | |
| CATAGATGGTTTAATGTTGC+AGG | + | chr6_4:46798389-46798408 | Msa0989620:CDS | 35.0% | |
| AAGTTGTCCTATAGCAAACA+TGG | - | chr6_4:46798415-46798434 | None:intergenic | 35.0% | |
| AGGACAACTTGAATCACATT+TGG | + | chr6_4:46798425-46798444 | Msa0989620:CDS | 35.0% | |
| GGACAACTTGAATCACATTT+GGG | + | chr6_4:46798426-46798445 | Msa0989620:CDS | 35.0% | |
| GACAACTTGAATCACATTTG+GGG | + | chr6_4:46798427-46798446 | Msa0989620:CDS | 35.0% | |
| TGCAGACGAGTATTTGAAAA+AGG | + | chr6_4:46798563-46798582 | Msa0989620:CDS | 35.0% | |
| !! | TTTGAAAAAGGCACTGACTA+TGG | + | chr6_4:46798575-46798594 | Msa0989620:CDS | 35.0% |
| ACTATGGCAAATCAGATCTA+TGG | + | chr6_4:46798591-46798610 | Msa0989620:CDS | 35.0% | |
| ATACAGAACAACAAGCTGTT+AGG | - | chr6_4:46798711-46798730 | None:intergenic | 35.0% | |
| ! | TGTTGTTCTGTATTTGTTGC+AGG | + | chr6_4:46798718-46798737 | Msa0989620:intron | 35.0% |
| GGCTGTTGTCTTAACAAATA+TGG | + | chr6_4:46798759-46798778 | Msa0989620:CDS | 35.0% | |
| TAGGACTGAAAATGTGAATG+TGG | + | chr6_4:46798968-46798987 | Msa0989620:intron | 35.0% | |
| AGGACTGAAAATGTGAATGT+GGG | + | chr6_4:46798969-46798988 | Msa0989620:intron | 35.0% | |
| ! | GCATTGTGCATCATTTTATC+AGG | + | chr6_4:46799029-46799048 | Msa0989620:intron | 35.0% |
| AAATATAGGAATGTGGAACG+TGG | + | chr6_4:46799055-46799074 | Msa0989620:intron | 35.0% | |
| !! | GTCTATTGTGTGACTTGTTT+CGG | + | chr6_4:46799100-46799119 | Msa0989620:intron | 35.0% |
| !! | TGTGACTTGTTTCGGATATA+AGG | + | chr6_4:46799108-46799127 | Msa0989620:intron | 35.0% |
| !! | GTGACTTGTTTCGGATATAA+GGG | + | chr6_4:46799109-46799128 | Msa0989620:intron | 35.0% |
| CTAGGTAGTTGTACCATTAA+AGG | - | chr6_4:46799209-46799228 | None:intergenic | 35.0% | |
| GTGATCTCATTATAGACACA+CGG | + | chr6_4:46799330-46799349 | Msa0989620:intron | 35.0% | |
| ! | CTTTGGGGGGTTATATTATA+GGG | + | chr6_4:46799436-46799455 | Msa0989620:intron | 35.0% |
| TTTGGGGGGTTATATTATAG+GGG | + | chr6_4:46799437-46799456 | Msa0989620:intron | 35.0% | |
| ! | TGCATTTTATATGCAAGGTC+GGG | + | chr6_4:46799570-46799589 | Msa0989620:intron | 35.0% |
| !!! | CTTTTTAAGGTGACTAAGTG+AGG | - | chr6_4:46799616-46799635 | None:intergenic | 35.0% |
| CTCACTTAGTCACCTTAAAA+AGG | + | chr6_4:46799614-46799633 | Msa0989620:intron | 35.0% | |
| GTAACTGGAAAATCATTGAC+AGG | + | chr6_4:46799765-46799784 | Msa0989620:intron | 35.0% | |
| TTACCTTCAGATTCAGTTTC+AGG | - | chr6_4:46799832-46799851 | None:intergenic | 35.0% | |
| GATATAGATAAGTGGGCATA+AGG | - | chr6_4:46799876-46799895 | None:intergenic | 35.0% | |
| TCTATAGCAGCAGTGATTTA+TGG | + | chr6_4:46799937-46799956 | Msa0989620:intron | 35.0% | |
| TACACACTGAGATATGTAAG+AGG | - | chr6_4:46799970-46799989 | None:intergenic | 35.0% | |
| TTGTGAAATTCATCATTCCC+TGG | + | chr6_4:46800064-46800083 | Msa0989620:intron | 35.0% | |
| TGATCAGTCTGAGTAAACAA+GGG | - | chr6_4:46800150-46800169 | None:intergenic | 35.0% | |
| ATGATCAGTCTGAGTAAACA+AGG | - | chr6_4:46800151-46800170 | None:intergenic | 35.0% | |
| CATGGGTTCAATACATGAAA+TGG | + | chr6_4:46800468-46800487 | Msa0989620:intron | 35.0% | |
| AAGCCTCCTATGTAAAAAAC+AGG | + | chr6_4:46800513-46800532 | Msa0989620:intron | 35.0% | |
| AGCCTCCTATGTAAAAAACA+GGG | + | chr6_4:46800514-46800533 | Msa0989620:intron | 35.0% | |
| !!! | TACCCTGTTTTTTACATAGG+AGG | - | chr6_4:46800519-46800538 | None:intergenic | 35.0% |
| !!! | CCTTACCCTGTTTTTTACAT+AGG | - | chr6_4:46800522-46800541 | None:intergenic | 35.0% |
| CCTATGTAAAAAACAGGGTA+AGG | + | chr6_4:46800519-46800538 | Msa0989620:intron | 35.0% | |
| ACCATTTCATGTATTGTACG+CGG | - | chr6_4:46800545-46800564 | None:intergenic | 35.0% | |
| CGTACAATACATGAAATGGT+GGG | + | chr6_4:46800545-46800564 | Msa0989620:intron | 35.0% | |
| ATATCATTTCTCTTTACCGC+GGG | - | chr6_4:46800891-46800910 | None:intergenic | 35.0% | |
| CATATCATTTCTCTTTACCG+CGG | - | chr6_4:46800892-46800911 | None:intergenic | 35.0% | |
| GGTAAAGAGAAATGATATGG+TGG | + | chr6_4:46800893-46800912 | Msa0989620:CDS | 35.0% | |
| ATGGACTCATTGATCCTTTA+GGG | + | chr6_4:46800933-46800952 | Msa0989620:intron | 35.0% | |
| TAAGTGTGTGTTTGGATTGA+GGG | - | chr6_4:46801185-46801204 | None:intergenic | 35.0% | |
| ATAAGTGTGTGTTTGGATTG+AGG | - | chr6_4:46801186-46801205 | None:intergenic | 35.0% | |
| ! | AGATATGTATCGATCTGTAG+TGG | - | chr6_4:46801334-46801353 | None:intergenic | 35.0% |
| GTATAAGAGAAATGCTTAGG+TGG | + | chr6_4:46801365-46801384 | Msa0989620:intron | 35.0% | |
| ! | ATGTCTCTGGATGATTTTCT+AGG | + | chr6_4:46801605-46801624 | Msa0989620:CDS | 35.0% |
| AATACTCCAACCTAAACCTT+CGG | - | chr6_4:46801720-46801739 | None:intergenic | 35.0% | |
| ! | GAAAATTAGTTCTTGGTGTG+TGG | + | chr6_4:46801769-46801788 | Msa0989620:three_prime_UTR | 35.0% |
| GTGTATAATGACACGGAAAA+TGG | + | chr6_4:46801861-46801880 | Msa0989620:three_prime_UTR | 35.0% | |
| GGGAAATCGGAAATGACTTA+TGG | + | chr6_4:46796808-46796827 | Msa0989620:exon | 40.0% | |
| ! | CGTTGGTTGAAGTAGTGATT+TGG | - | chr6_4:46796891-46796910 | None:intergenic | 40.0% |
| ! | AATGAAATACGGGAGGGTTT+TGG | - | chr6_4:46796977-46796996 | None:intergenic | 40.0% |
| GATCTGAATGAAATACGGGA+GGG | - | chr6_4:46796983-46797002 | None:intergenic | 40.0% | |
| TGATCTGAATGAAATACGGG+AGG | - | chr6_4:46796984-46797003 | None:intergenic | 40.0% | |
| TAGCTGCTGTTGATGTTGTT+CGG | + | chr6_4:46797035-46797054 | Msa0989620:CDS | 40.0% | |
| GAAGCTAGGTCTGAAAAATC+AGG | + | chr6_4:46797079-46797098 | Msa0989620:CDS | 40.0% | |
| GTGTGAATAGTTGGATCGTA+CGG | + | chr6_4:46797336-46797355 | Msa0989620:intron | 40.0% | |
| ATAGTTGGATCGTACGGTAT+CGG | + | chr6_4:46797342-46797361 | Msa0989620:intron | 40.0% | |
| CTTACAACTGAGTTAACCCA+AGG | + | chr6_4:46797387-46797406 | Msa0989620:CDS | 40.0% | |
| !! | CGTGTTTTGGATCATTTCCT+TGG | - | chr6_4:46797407-46797426 | None:intergenic | 40.0% |
| !!! | CCTTTGGAATTCTCGTGTTT+TGG | - | chr6_4:46797420-46797439 | None:intergenic | 40.0% |
| CCAAAACACGAGAATTCCAA+AGG | + | chr6_4:46797417-46797436 | Msa0989620:CDS | 40.0% | |
| GATGCAATTGAGAAGCTCAA+TGG | + | chr6_4:46797604-46797623 | Msa0989620:CDS | 40.0% | |
| ATAGGATGATATGGCATCTG+CGG | + | chr6_4:46797902-46797921 | Msa0989620:intron | 40.0% | |
| GTGAAGGGAGATATTAAGTC+AGG | + | chr6_4:46798023-46798042 | Msa0989620:CDS | 40.0% | |
| AAGGGAGATATTAAGTCAGG+TGG | + | chr6_4:46798026-46798045 | Msa0989620:intron | 40.0% | |
| CGGAGAGATTTGTCAAAGAA+AGG | - | chr6_4:46798137-46798156 | None:intergenic | 40.0% | |
| AAAGTTACCACAGCATAGCT+TGG | - | chr6_4:46798162-46798181 | None:intergenic | 40.0% | |
| GCCACTGAACTTAAAGAAAG+AGG | + | chr6_4:46798336-46798355 | Msa0989620:CDS | 40.0% | |
| ! | GCCTCTTTCTTTAAGTTCAG+TGG | - | chr6_4:46798340-46798359 | None:intergenic | 40.0% |
| GGCAATATATACTTAGGAGG+TGG | + | chr6_4:46798357-46798376 | Msa0989620:CDS | 40.0% | |
| GGTGGTAACATGAACATAGA+TGG | + | chr6_4:46798375-46798394 | Msa0989620:CDS | 40.0% | |
| ! | ACTTGAATCACATTTGGGGT+AGG | + | chr6_4:46798431-46798450 | Msa0989620:intron | 40.0% |
| AATACTCGTCTGCATTAGAG+AGG | - | chr6_4:46798557-46798576 | None:intergenic | 40.0% | |
| AAATGGGGTTTCACTATCAC+TGG | - | chr6_4:46798889-46798908 | None:intergenic | 40.0% | |
| AATGTGAATGTGGGACCAAA+AGG | + | chr6_4:46798978-46798997 | Msa0989620:intron | 40.0% | |
| ATGTGAATGTGGGACCAAAA+GGG | + | chr6_4:46798979-46798998 | Msa0989620:intron | 40.0% | |
| ! | TGCTGTACTATTTGCCCTTT+TGG | - | chr6_4:46798996-46799015 | None:intergenic | 40.0% |
| ATGATGCACAATGCATGCTT+GGG | - | chr6_4:46799023-46799042 | None:intergenic | 40.0% | |
| AATGATGCACAATGCATGCT+TGG | - | chr6_4:46799024-46799043 | None:intergenic | 40.0% | |
| TTCGGATATAAGGGAATGTG+AGG | + | chr6_4:46799118-46799137 | Msa0989620:intron | 40.0% | |
| CCTATGAAGTTGCATACTCT+AGG | - | chr6_4:46799248-46799267 | None:intergenic | 40.0% | |
| CCTAGAGTATGCAACTTCAT+AGG | + | chr6_4:46799245-46799264 | Msa0989620:intron | 40.0% | |
| ATAGACACACGGAATACACA+CGG | + | chr6_4:46799341-46799360 | Msa0989620:intron | 40.0% | |
| TTCTCTCTGACCAAACCATA+AGG | - | chr6_4:46799389-46799408 | None:intergenic | 40.0% | |
| AGAAGAATACCTCTTCTCTG+AGG | + | chr6_4:46799405-46799424 | Msa0989620:intron | 40.0% | |
| !! | GCTTTGGGGGGTTATATTAT+AGG | + | chr6_4:46799435-46799454 | Msa0989620:intron | 40.0% |
| ! | GCTAGAAACTCGCCTTTTTA+AGG | - | chr6_4:46799629-46799648 | None:intergenic | 40.0% |
| ! | GGTAATATTATTGTGCCGCT+TGG | + | chr6_4:46799847-46799866 | Msa0989620:intron | 40.0% |
| TAGCAGCAGTGATTTATGGT+TGG | + | chr6_4:46799941-46799960 | Msa0989620:intron | 40.0% | |
| TGAACAGTCACAAACAGACA+TGG | - | chr6_4:46800033-46800052 | None:intergenic | 40.0% | |
| ATTCATCATTCCCTGGCATT+TGG | + | chr6_4:46800071-46800090 | Msa0989620:intron | 40.0% | |
| TTATCTGACACCAAATGCCA+GGG | - | chr6_4:46800084-46800103 | None:intergenic | 40.0% | |
| ATTATCTGACACCAAATGCC+AGG | - | chr6_4:46800085-46800104 | None:intergenic | 40.0% | |
| !! | GGCATTTGGTGTCAGATAAT+TGG | + | chr6_4:46800085-46800104 | Msa0989620:intron | 40.0% |
| ! | AAGAAGCATGTGTGTGTGTT+GGG | - | chr6_4:46800124-46800143 | None:intergenic | 40.0% |
| ! | TAAGAAGCATGTGTGTGTGT+TGG | - | chr6_4:46800125-46800144 | None:intergenic | 40.0% |
| CATATATAGAGGGGTAACCT+TGG | + | chr6_4:46800408-46800427 | Msa0989620:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr6_4:46800444-46800463 | Msa0989620:intron | 40.0% | |
| TCATGTGACTGAAAGGTCAT+GGG | + | chr6_4:46800451-46800470 | Msa0989620:intron | 40.0% | |
| GCGTACAATACATGAAATGG+TGG | + | chr6_4:46800544-46800563 | Msa0989620:intron | 40.0% | |
| TTAGTGCAACTTTAGTGCAC+TGG | + | chr6_4:46800600-46800619 | Msa0989620:intron | 40.0% | |
| TAGTGCAACTTTAGTGCACT+GGG | + | chr6_4:46800601-46800620 | Msa0989620:intron | 40.0% | |
| CTCTTGCTAGGTCTATAGAT+AGG | + | chr6_4:46800661-46800680 | Msa0989620:intron | 40.0% | |
| CGCGGTAAAGAGAAATGATA+TGG | + | chr6_4:46800890-46800909 | Msa0989620:CDS | 40.0% | |
| ! | GATGGACTCATTGATCCTTT+AGG | + | chr6_4:46800932-46800951 | Msa0989620:intron | 40.0% |
| TCAATCGAAACACACCCTAA+AGG | - | chr6_4:46800950-46800969 | None:intergenic | 40.0% | |
| ! | TTTAGGGTGTGTTTCGATTG+AGG | + | chr6_4:46800949-46800968 | Msa0989620:intron | 40.0% |
| TTAGGGTGTGTTTCGATTGA+GGG | + | chr6_4:46800950-46800969 | Msa0989620:intron | 40.0% | |
| TGTGTTTCGATTGAGGGTTT+AGG | + | chr6_4:46800956-46800975 | Msa0989620:intron | 40.0% | |
| TTTCGATTGAGGGTTTAGGA+GGG | + | chr6_4:46800960-46800979 | Msa0989620:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr6_4:46801175-46801194 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr6_4:46801179-46801198 | None:intergenic | 40.0% | |
| ACTACTAAGTGCCCTAGAAA+AGG | + | chr6_4:46801529-46801548 | Msa0989620:CDS | 40.0% | |
| CTACTAAGTGCCCTAGAAAA+GGG | + | chr6_4:46801530-46801549 | Msa0989620:CDS | 40.0% | |
| GAAAAACAACAGGATGTCTC+TGG | + | chr6_4:46801592-46801611 | Msa0989620:CDS | 40.0% | |
| TTGTTGATGCTCGTATTTGC+AGG | + | chr6_4:46801654-46801673 | Msa0989620:CDS | 40.0% | |
| GAAGCTATGCGAAACATCGT+TGG | - | chr6_4:46796908-46796927 | None:intergenic | 45.0% | |
| GTGACAGAAACAAGAGCTCT+TGG | - | chr6_4:46796953-46796972 | None:intergenic | 45.0% | |
| CAGATCATTCTACTCTGGTG+TGG | + | chr6_4:46796997-46797016 | Msa0989620:CDS | 45.0% | |
| TAGTTGGATCGTACGGTATC+GGG | + | chr6_4:46797343-46797362 | Msa0989620:intron | 45.0% | |
| !! | ATCGTACGGTATCGGGTTTT+TGG | + | chr6_4:46797350-46797369 | Msa0989620:CDS | 45.0% |
| AGCGAGCAAAGCAATTCCTT+TGG | - | chr6_4:46797436-46797455 | None:intergenic | 45.0% | |
| AGTTGCTGCATATGAAGCTC+AGG | + | chr6_4:46797772-46797791 | Msa0989620:intron | 45.0% | |
| ! | GGCTGGACTTTATCTAGAGT+TGG | + | chr6_4:46797793-46797812 | Msa0989620:CDS | 45.0% |
| AGGGCTCATTGAACTTGTGA+AGG | + | chr6_4:46798007-46798026 | Msa0989620:CDS | 45.0% | |
| GGGCTCATTGAACTTGTGAA+GGG | + | chr6_4:46798008-46798027 | Msa0989620:CDS | 45.0% | |
| AAGAAAGGTTCAGCTGCAAC+AGG | - | chr6_4:46798122-46798141 | None:intergenic | 45.0% | |
| CATCAGTCATTCTTCGATCG+TGG | + | chr6_4:46798197-46798216 | Msa0989620:intron | 45.0% | |
| ATGCAGAGTTCCAACAAGCT+AGG | + | chr6_4:46798265-46798284 | Msa0989620:CDS | 45.0% | |
| ! | AGATGTTCTGCCTAGCTTGT+TGG | - | chr6_4:46798278-46798297 | None:intergenic | 45.0% |
| !! | TGGCTCCTTCTAAGACATTC+TGG | - | chr6_4:46798320-46798339 | None:intergenic | 45.0% |
| !! | TTGCAGGCCATGTTTGCTAT+AGG | + | chr6_4:46798405-46798424 | Msa0989620:CDS | 45.0% |
| ! | AACCAGGCTCAGTGATAATG+CGG | - | chr6_4:46798675-46798694 | None:intergenic | 45.0% |
| ATTATCACTGAGCCTGGTTG+TGG | + | chr6_4:46798676-46798695 | Msa0989620:intron | 45.0% | |
| AGGAACAATATGCCACAACC+AGG | - | chr6_4:46798691-46798710 | None:intergenic | 45.0% | |
| GTTAAGACAACAGCCAGCTT+GGG | - | chr6_4:46798754-46798773 | None:intergenic | 45.0% | |
| TGTTAAGACAACAGCCAGCT+TGG | - | chr6_4:46798755-46798774 | None:intergenic | 45.0% | |
| !! | ACCTCTTCTCTGAGGAGTTT+TGG | + | chr6_4:46799413-46799432 | Msa0989620:intron | 45.0% |
| !!! | TCTCTGAGGAGTTTTGGCTT+TGG | + | chr6_4:46799419-46799438 | Msa0989620:intron | 45.0% |
| !!! | CTCTGAGGAGTTTTGGCTTT+GGG | + | chr6_4:46799420-46799439 | Msa0989620:intron | 45.0% |
| !!! | TCTGAGGAGTTTTGGCTTTG+GGG | + | chr6_4:46799421-46799440 | Msa0989620:intron | 45.0% |
| !! | TTTTGGGTCAAGTAGCCTAG+TGG | - | chr6_4:46799651-46799670 | None:intergenic | 45.0% |
| ! | CAGATTCAGTTTCAGGTGGT+GGG | - | chr6_4:46799825-46799844 | None:intergenic | 45.0% |
| ! | TCAGATTCAGTTTCAGGTGG+TGG | - | chr6_4:46799826-46799845 | None:intergenic | 45.0% |
| CCTTCAGATTCAGTTTCAGG+TGG | - | chr6_4:46799829-46799848 | None:intergenic | 45.0% | |
| CCACCTGAAACTGAATCTGA+AGG | + | chr6_4:46799826-46799845 | Msa0989620:CDS | 45.0% | |
| CAGCAGTGATTTATGGTTGG+TGG | + | chr6_4:46799944-46799963 | Msa0989620:intron | 45.0% | |
| GTCACAAACAGACATGGTTG+TGG | - | chr6_4:46800027-46800046 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+TGG | + | chr6_4:46800450-46800469 | Msa0989620:intron | 45.0% | |
| GCCGCGTACAATACATGAAA+TGG | + | chr6_4:46800541-46800560 | Msa0989620:intron | 45.0% | |
| GTTTCGATTGAGGGTTTAGG+AGG | + | chr6_4:46800959-46800978 | Msa0989620:intron | 45.0% | |
| TTCGATTGAGGGTTTAGGAG+GGG | + | chr6_4:46800961-46800980 | Msa0989620:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr6_4:46801174-46801193 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr6_4:46801176-46801195 | None:intergenic | 45.0% | |
| ! | TTCTCCTGCACCCTTTTCTA+GGG | - | chr6_4:46801543-46801562 | None:intergenic | 45.0% |
| ! | TTTCTCCTGCACCCTTTTCT+AGG | - | chr6_4:46801544-46801563 | None:intergenic | 45.0% |
| TATCTTGCTGCCGAAGGTTT+AGG | + | chr6_4:46801707-46801726 | Msa0989620:three_prime_UTR | 45.0% | |
| GACACGGAAAATGGTGACTA+TGG | + | chr6_4:46801870-46801889 | Msa0989620:three_prime_UTR | 45.0% | |
| ! | TACCACAGCATAGCTTGGTG+CGG | - | chr6_4:46798157-46798176 | None:intergenic | 50.0% |
| CTCTGCATACGATAGAGCAG+CGG | - | chr6_4:46798253-46798272 | None:intergenic | 50.0% | |
| TACCGCATTATCACTGAGCC+TGG | + | chr6_4:46798670-46798689 | Msa0989620:intron | 50.0% | |
| AGGCGAAAAACATCCCAAGC+TGG | + | chr6_4:46798738-46798757 | Msa0989620:intron | 50.0% | |
| GGAATGTGAGGAGAGAGAGA+GGG | + | chr6_4:46799130-46799149 | Msa0989620:intron | 50.0% | |
| GAATGTGAGGAGAGAGAGAG+GGG | + | chr6_4:46799131-46799150 | Msa0989620:intron | 50.0% | |
| GCCAAAACTCCTCAGAGAAG+AGG | - | chr6_4:46799417-46799436 | None:intergenic | 50.0% | |
| !!! | CTGAGGAGTTTTGGCTTTGG+GGG | + | chr6_4:46799422-46799441 | Msa0989620:intron | 50.0% |
| !!! | TGAGGAGTTTTGGCTTTGGG+GGG | + | chr6_4:46799423-46799442 | Msa0989620:intron | 50.0% |
| TGCCAACTGAGCTAAGCTCA+CGG | - | chr6_4:46799543-46799562 | None:intergenic | 50.0% | |
| AGGTGACTAAGTGAGGAGTC+CGG | - | chr6_4:46799609-46799628 | None:intergenic | 50.0% | |
| !! | AAGGCGAGTTTCTAGCCACT+AGG | + | chr6_4:46799633-46799652 | Msa0989620:intron | 50.0% |
| GTGGGCATAAGGTAACCAAG+CGG | - | chr6_4:46799865-46799884 | None:intergenic | 50.0% | |
| !! | TGTGTGTGTTGGGTTGAGGA+CGG | - | chr6_4:46800114-46800133 | None:intergenic | 50.0% |
| ! | CATGTGTGTGTGTTGGGTTG+AGG | - | chr6_4:46800118-46800137 | None:intergenic | 50.0% |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr6_4:46800428-46800447 | None:intergenic | 50.0% | |
| !! | GAAATGGTGGGTCACCTTCT+CGG | + | chr6_4:46800557-46800576 | Msa0989620:intron | 50.0% |
| GATATGGTGGCTCTTGCAAG+TGG | + | chr6_4:46800906-46800925 | Msa0989620:CDS | 50.0% | |
| GGCTCTTGCAAGTGGTATGA+TGG | + | chr6_4:46800914-46800933 | Msa0989620:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr6_4:46800965-46800984 | Msa0989620:intron | 50.0% | |
| GGTTTAGGAGGGGAAGGAAT+GGG | + | chr6_4:46800971-46800990 | Msa0989620:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr6_4:46800966-46800985 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr6_4:46800965-46800984 | None:intergenic | 50.0% | |
| TTGCTGCCGAAGGTTTAGGT+TGG | + | chr6_4:46801711-46801730 | Msa0989620:three_prime_UTR | 50.0% | |
| GCTGCATATGAAGCTCAGGC+TGG | + | chr6_4:46797776-46797795 | Msa0989620:CDS | 55.0% | |
| GGATGATATGGCATCTGCGG+TGG | + | chr6_4:46797905-46797924 | Msa0989620:intron | 55.0% | |
| GCAGAAGTCACGTTCGCTTG+TGG | + | chr6_4:46798804-46798823 | Msa0989620:CDS | 55.0% | |
| GTCACGTTCGCTTGTGGTTG+AGG | + | chr6_4:46798810-46798829 | Msa0989620:CDS | 55.0% | |
| ACGTTCGCTTGTGGTTGAGG+AGG | + | chr6_4:46798813-46798832 | Msa0989620:CDS | 55.0% | |
| GTGGAACGTGGAATGCGACT+TGG | + | chr6_4:46799067-46799086 | Msa0989620:intron | 55.0% | |
| ! | GTGGAATGCGACTTGGCAGA+GGG | + | chr6_4:46799074-46799093 | Msa0989620:intron | 55.0% |
| ! | TGGAATGCGACTTGGCAGAG+GGG | + | chr6_4:46799075-46799094 | Msa0989620:intron | 55.0% |
| GGGAATGTGAGGAGAGAGAG+AGG | + | chr6_4:46799129-46799148 | Msa0989620:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+GGG | - | chr6_4:46799541-46799560 | None:intergenic | 55.0% | |
| GCCAACTGAGCTAAGCTCAC+GGG | - | chr6_4:46799542-46799561 | None:intergenic | 55.0% | |
| CTAAGTGAGGAGTCCGGGAT+GGG | - | chr6_4:46799603-46799622 | None:intergenic | 55.0% | |
| ACTAAGTGAGGAGTCCGGGA+TGG | - | chr6_4:46799604-46799623 | None:intergenic | 55.0% | |
| GGTGACTAAGTGAGGAGTCC+GGG | - | chr6_4:46799608-46799627 | None:intergenic | 55.0% | |
| ! | GGTGGGGCATCAAAGAAGCA+TGG | - | chr6_4:46799716-46799735 | None:intergenic | 55.0% |
| CTTCTCGGATCCTGCGAATG+CGG | + | chr6_4:46800572-46800591 | Msa0989620:intron | 55.0% | |
| TTCTCGGATCCTGCGAATGC+GGG | + | chr6_4:46800573-46800592 | Msa0989620:intron | 55.0% | |
| ACTAAAGCTCCCGCATTCGC+AGG | - | chr6_4:46800585-46800604 | None:intergenic | 55.0% | |
| GGGTTTAGGAGGGGAAGGAA+TGG | + | chr6_4:46800970-46800989 | Msa0989620:intron | 55.0% | |
| TTAGGAGGGGAAGGAATGGG+AGG | + | chr6_4:46800974-46800993 | Msa0989620:intron | 55.0% | |
| TAGGAGGGGAAGGAATGGGA+GGG | + | chr6_4:46800975-46800994 | Msa0989620:intron | 55.0% | |
| ! | AGTGCCCTAGAAAAGGGTGC+AGG | + | chr6_4:46801536-46801555 | Msa0989620:CDS | 55.0% |
| GCTGCTTATCTTGCTGCCGA+AGG | + | chr6_4:46801701-46801720 | Msa0989620:three_prime_UTR | 55.0% | |
| CTCCGCACCAAGCTATGCTG+TGG | + | chr6_4:46798152-46798171 | Msa0989620:CDS | 60.0% | |
| ! | CGTGGAATGCGACTTGGCAG+AGG | + | chr6_4:46799073-46799092 | Msa0989620:intron | 60.0% |
| ! | GGAATGCGACTTGGCAGAGG+GGG | + | chr6_4:46799076-46799095 | Msa0989620:intron | 60.0% |
| CCCCGTGAGCTTAGCTCAGT+TGG | + | chr6_4:46799538-46799557 | Msa0989620:intron | 60.0% | |
| GTCGGGTTCGAATCCCATCC+CGG | + | chr6_4:46799587-46799606 | Msa0989620:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr6_4:46800417-46800436 | Msa0989620:intron | 60.0% | |
| CGCATTCGCAGGATCCGAGA+AGG | - | chr6_4:46800574-46800593 | None:intergenic | 60.0% | |
| ! | AGGTGCTGCAGCTAAACCCG+CGG | + | chr6_4:46800872-46800891 | Msa0989620:intron | 60.0% |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr6_4:46801165-46801184 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr6_4:46801166-46801185 | None:intergenic | 60.0% | |
| TTAGGAGGGGAAGGGAGGGC+AGG | - | chr6_4:46801161-46801180 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 46796783 | 46802032 | 46796783 | ID=Msa0989620;Name=Msa0989620 |
| chr6_4 | mRNA | 46796783 | 46802032 | 46796783 | ID=Msa0989620-mRNA-1;Parent=Msa0989620;Name=Msa0989620-mRNA-1;_AED=0.12;_eAED=0.12;_QI=44|1|1|1|1|1|12|347|451 |
| chr6_4 | exon | 46796783 | 46797100 | 46796783 | ID=Msa0989620-mRNA-1:exon:10552;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46797346 | 46797478 | 46797346 | ID=Msa0989620-mRNA-1:exon:10553;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46797591 | 46797664 | 46797591 | ID=Msa0989620-mRNA-1:exon:10554;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46797774 | 46797820 | 46797774 | ID=Msa0989620-mRNA-1:exon:10555;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46797906 | 46798044 | 46797906 | ID=Msa0989620-mRNA-1:exon:10556;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46798129 | 46798173 | 46798129 | ID=Msa0989620-mRNA-1:exon:10557;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46798247 | 46798448 | 46798247 | ID=Msa0989620-mRNA-1:exon:10558;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46798551 | 46798612 | 46798551 | ID=Msa0989620-mRNA-1:exon:10559;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46798740 | 46798834 | 46798740 | ID=Msa0989620-mRNA-1:exon:10560;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46799787 | 46799847 | 46799787 | ID=Msa0989620-mRNA-1:exon:10561;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46800874 | 46800927 | 46800874 | ID=Msa0989620-mRNA-1:exon:10562;Parent=Msa0989620-mRNA-1 |
| chr6_4 | exon | 46801516 | 46802032 | 46801516 | ID=Msa0989620-mRNA-1:exon:10563;Parent=Msa0989620-mRNA-1 |
| chr6_4 | five_prime_UTR | 46796783 | 46796826 | 46796783 | ID=Msa0989620-mRNA-1:five_prime_utr;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46796827 | 46797100 | 46796827 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46797346 | 46797478 | 46797346 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46797591 | 46797664 | 46797591 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46797774 | 46797820 | 46797774 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46797906 | 46798044 | 46797906 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46798129 | 46798173 | 46798129 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46798247 | 46798448 | 46798247 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46798551 | 46798612 | 46798551 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46798740 | 46798834 | 46798740 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46799787 | 46799847 | 46799787 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46800874 | 46800927 | 46800874 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | CDS | 46801516 | 46801685 | 46801516 | ID=Msa0989620-mRNA-1:cds;Parent=Msa0989620-mRNA-1 |
| chr6_4 | three_prime_UTR | 46801686 | 46802032 | 46801686 | ID=Msa0989620-mRNA-1:three_prime_utr;Parent=Msa0989620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
