Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032590 | XP_003591188.1 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032590 | sp|Q8LB54|PRP38_ARATH | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.75e-116 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0032590 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa0032470 | Msa0032590 | 0.831269 | 1.836648e-55 | -8.615850e-47 |
| Msa0032590 | Msa0033110 | 0.804010 | 2.652588e-49 | -8.615850e-47 |
| Msa0032590 | Msa0044000 | 0.802937 | 4.424999e-49 | -8.615850e-47 |
| Msa0032590 | Msa0044260 | 0.803445 | 3.473741e-49 | -8.615850e-47 |
| Msa0032590 | Msa0044330 | 0.820161 | 7.939380e-53 | -8.615850e-47 |
| Msa0032590 | Msa0051020 | 0.806503 | 7.971293e-50 | -8.615850e-47 |
| Msa0032590 | Msa0072420 | 0.834210 | 3.418942e-56 | -8.615850e-47 |
| Msa0032590 | Msa0089750 | 0.800877 | 1.172508e-48 | -8.615850e-47 |
| Msa0032590 | Msa0090360 | 0.806343 | 8.612458e-50 | -8.615850e-47 |
| Msa0032590 | Msa0090570 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
| Msa0032590 | Msa0101270 | 0.818570 | 1.829992e-52 | -8.615850e-47 |
| Msa0032590 | Msa0104230 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0032590 | Msa0104240 | 0.810323 | 1.220512e-50 | -8.615850e-47 |
| Msa0032590 | Msa0106620 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa0032590 | Msa0106710 | 0.841771 | 3.882885e-58 | -8.615850e-47 |
| Msa0032590 | Msa0114060 | 0.805610 | 1.228245e-49 | -8.615850e-47 |
| Msa0032590 | Msa0127800 | 0.811271 | 7.609405e-51 | -8.615850e-47 |
| Msa0032590 | Msa0145580 | 0.803136 | 4.025492e-49 | -8.615850e-47 |
| Msa0032590 | Msa0150230 | 0.817142 | 3.844214e-52 | -8.615850e-47 |
| Msa0032590 | Msa0186950 | 0.806889 | 6.607050e-50 | -8.615850e-47 |
| Msa0032590 | Msa0204960 | 0.826993 | 1.999052e-54 | -8.615850e-47 |
| Msa0032590 | Msa0207040 | -0.819894 | 9.136314e-53 | -8.615850e-47 |
| Msa0032590 | Msa0209500 | 0.810161 | 1.322810e-50 | -8.615850e-47 |
| Msa0032590 | Msa0211150 | 0.824199 | 9.187067e-54 | -8.615850e-47 |
| Msa0032590 | Msa0214550 | 0.810128 | 1.344732e-50 | -8.615850e-47 |
| Msa0032590 | Msa0232050 | 0.804055 | 2.595306e-49 | -8.615850e-47 |
| Msa0032590 | Msa0236510 | -0.818207 | 2.210497e-52 | -8.615850e-47 |
| Msa0032590 | Msa0240900 | 0.822986 | 1.766185e-53 | -8.615850e-47 |
| Msa0032590 | Msa0241140 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa0032590 | Msa0249860 | 0.804531 | 2.065816e-49 | -8.615850e-47 |
| Msa0032590 | Msa0259430 | 0.801932 | 7.130687e-49 | -8.615850e-47 |
| Msa0032590 | Msa0278580 | 0.808133 | 3.596564e-50 | -8.615850e-47 |
| Msa0032590 | Msa0281530 | 0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0032590 | Msa0288080 | 0.809425 | 1.904105e-50 | -8.615850e-47 |
| Msa0032590 | Msa0305610 | 0.804623 | 1.976570e-49 | -8.615850e-47 |
| Msa0032590 | Msa0317940 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa0032590 | Msa0317970 | 0.830203 | 3.352727e-55 | -8.615850e-47 |
| Msa0032590 | Msa0318680 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0032590 | Msa0326480 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
| Msa0032590 | Msa0341690 | 0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0032590 | Msa0343850 | 0.822705 | 2.052746e-53 | -8.615850e-47 |
| Msa0032590 | Msa0357900 | 0.816141 | 6.444852e-52 | -8.615850e-47 |
| Msa0032590 | Msa0363790 | 0.803204 | 3.898330e-49 | -8.615850e-47 |
| Msa0032590 | Msa0391430 | 0.813513 | 2.463919e-51 | -8.615850e-47 |
| Msa0032590 | Msa0436760 | 0.800851 | 1.187181e-48 | -8.615850e-47 |
| Msa0032590 | Msa0450400 | -0.812545 | 4.017366e-51 | -8.615850e-47 |
| Msa0032590 | Msa0452710 | 0.812144 | 4.913602e-51 | -8.615850e-47 |
| Msa0032590 | Msa0454360 | 0.816807 | 4.571351e-52 | -8.615850e-47 |
| Msa0032590 | Msa0464680 | 0.804021 | 2.638232e-49 | -8.615850e-47 |
| Msa0032590 | Msa0471670 | 0.803333 | 3.665291e-49 | -8.615850e-47 |
| Msa0032590 | Msa0532980 | 0.814599 | 1.419214e-51 | -8.615850e-47 |
| Msa0032590 | Msa0532990 | 0.833234 | 5.995233e-56 | -8.615850e-47 |
| Msa0032590 | Msa0542290 | 0.801823 | 7.507687e-49 | -8.615850e-47 |
| Msa0032590 | Msa0572840 | 0.834396 | 3.070321e-56 | -8.615850e-47 |
| Msa0032590 | Msa0585560 | 0.800964 | 1.125548e-48 | -8.615850e-47 |
| Msa0032590 | Msa0610840 | -0.814876 | 1.232150e-51 | -8.615850e-47 |
| Msa0032590 | Msa0615710 | 0.807051 | 6.104359e-50 | -8.615850e-47 |
| Msa0032590 | Msa0637900 | 0.802840 | 4.635854e-49 | -8.615850e-47 |
| Msa0032590 | Msa0649220 | 0.816276 | 6.010336e-52 | -8.615850e-47 |
| Msa0032590 | Msa0663390 | 0.808327 | 3.270552e-50 | -8.615850e-47 |
| Msa0032590 | Msa0672690 | 0.801668 | 8.076511e-49 | -8.615850e-47 |
| Msa0032590 | Msa0696540 | 0.819599 | 1.067124e-52 | -8.615850e-47 |
| Msa0032590 | Msa0705190 | 0.804171 | 2.455527e-49 | -8.615850e-47 |
| Msa0032590 | Msa0707250 | 0.828608 | 8.177647e-55 | -8.615850e-47 |
| Msa0032590 | Msa0741440 | 0.825244 | 5.209934e-54 | -8.615850e-47 |
| Msa0032590 | Msa0800370 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
| Msa0032590 | Msa0818060 | 0.805702 | 1.174996e-49 | -8.615850e-47 |
| Msa0032590 | Msa0822500 | 0.815802 | 7.670680e-52 | -8.615850e-47 |
| Msa0032590 | Msa0832340 | 0.812724 | 3.671141e-51 | -8.615850e-47 |
| Msa0032590 | Msa0865030 | 0.822279 | 2.578583e-53 | -8.615850e-47 |
| Msa0032590 | Msa0878220 | 0.819189 | 1.323272e-52 | -8.615850e-47 |
| Msa0032590 | Msa0919860 | 0.838594 | 2.621673e-57 | -8.615850e-47 |
| Msa0032590 | Msa0931520 | 0.806287 | 8.852583e-50 | -8.615850e-47 |
| Msa0032590 | Msa0936390 | 0.821430 | 4.053855e-53 | -8.615850e-47 |
| Msa0032590 | Msa0963270 | 0.807909 | 4.014743e-50 | -8.615850e-47 |
| Msa0032590 | Msa0974950 | 0.806700 | 7.243173e-50 | -8.615850e-47 |
| Msa0032590 | Msa0980540 | 0.800163 | 1.639296e-48 | -8.615850e-47 |
| Msa0032590 | Msa0980880 | 0.837074 | 6.442601e-57 | -8.615850e-47 |
| Msa0032590 | Msa1002850 | 0.833418 | 5.394457e-56 | -8.615850e-47 |
| Msa0032590 | Msa1013110 | 0.822682 | 2.078623e-53 | -8.615850e-47 |
| Msa0032590 | Msa1036610 | 0.808215 | 3.455368e-50 | -8.615850e-47 |
| Msa0032590 | Msa1081930 | 0.805265 | 1.450887e-49 | -8.615850e-47 |
| Msa0032590 | Msa1089450 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0032590 | Msa1089460 | 0.808426 | 3.115505e-50 | -8.615850e-47 |
| Msa0032590 | Msa1094190 | 0.819234 | 1.292827e-52 | -8.615850e-47 |
| Msa0032590 | Msa1101090 | 0.823755 | 1.167372e-53 | -8.615850e-47 |
| Msa0032590 | Msa1109680 | 0.825527 | 4.464823e-54 | -8.615850e-47 |
| Msa0032590 | Msa1111870 | 0.804173 | 2.452798e-49 | -8.615850e-47 |
| Msa0032590 | Msa1121490 | 0.802691 | 4.974852e-49 | -8.615850e-47 |
| Msa0032590 | Msa1135470 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0032590 | Msa1137570 | 0.824036 | 1.003140e-53 | -8.615850e-47 |
| Msa0032590 | Msa1145810 | 0.807743 | 4.355238e-50 | -8.615850e-47 |
| Msa0032590 | Msa1162780 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0032590 | Msa1163730 | 0.815868 | 7.414404e-52 | -8.615850e-47 |
| Msa0032590 | Msa1184910 | 0.802007 | 6.880843e-49 | -8.615850e-47 |
| Msa0032590 | Msa1204530 | 0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa0032590 | Msa1219010 | 0.806010 | 1.012514e-49 | -8.615850e-47 |
| Msa0032590 | Msa1226470 | 0.805572 | 1.251481e-49 | -8.615850e-47 |
| Msa0032590 | Msa1246360 | 0.823200 | 1.574310e-53 | -8.615850e-47 |
| Msa0032590 | Msa1254730 | 0.820211 | 7.732707e-53 | -8.615850e-47 |
| Msa0032590 | Msa1271130 | 0.807542 | 4.803293e-50 | -8.615850e-47 |
| Msa0032590 | Msa1305810 | 0.804658 | 1.943359e-49 | -8.615850e-47 |
| Msa0032590 | Msa1308870 | 0.815235 | 1.025627e-51 | -8.615850e-47 |
| Msa0032590 | Msa1315750 | 0.808915 | 2.449026e-50 | -8.615850e-47 |
| Msa0032590 | Msa1331000 | 0.800527 | 1.382130e-48 | -8.615850e-47 |
| Msa0032590 | Msa1332760 | 0.818376 | 2.024970e-52 | -8.615850e-47 |
| Msa0032590 | Msa1336560 | 0.808719 | 2.697785e-50 | -8.615850e-47 |
| Msa0032590 | Msa1341060 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
| Msa0032590 | Msa1345100 | 0.812850 | 3.445434e-51 | -8.615850e-47 |
| Msa0032590 | Msa1346840 | 0.824048 | 9.970086e-54 | -8.615850e-47 |
| Msa0032590 | Msa1347760 | 0.803863 | 2.845197e-49 | -8.615850e-47 |
| Msa0032590 | Msa1353470 | 0.800554 | 1.364872e-48 | -8.615850e-47 |
| Msa0032590 | Msa1368430 | 0.814406 | 1.565782e-51 | -8.615850e-47 |
| Msa0032590 | Msa1374470 | 0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa0032590 | Msa1375840 | 0.816491 | 5.381430e-52 | -8.615850e-47 |
| Msa0032590 | Msa1383230 | 0.810039 | 1.404985e-50 | -8.615850e-47 |
| Msa0032590 | Msa1384750 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
| Msa0032590 | Msa1393570 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
| Msa0032590 | Msa1400870 | -0.810162 | 1.321984e-50 | -8.615850e-47 |
| Msa0032590 | Msa1401990 | 0.813103 | 3.032171e-51 | -8.615850e-47 |
| Msa0032590 | Msa1404940 | 0.822291 | 2.562222e-53 | -8.615850e-47 |
| Msa0032590 | Msa1407190 | 0.801338 | 9.439107e-49 | -8.615850e-47 |
| Msa0032590 | Msa1419690 | 0.813678 | 2.266075e-51 | -8.615850e-47 |
| Msa0032590 | Msa1432420 | 0.805533 | 1.275309e-49 | -8.615850e-47 |
| Msa0032590 | Msa1433390 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0032590 | Msa1452710 | 0.824357 | 8.431708e-54 | -8.615850e-47 |
| Msa0032590 | Msa1454570 | 0.800105 | 1.684376e-48 | -8.615850e-47 |
| Msa0032590 | Msa1454620 | 0.805855 | 1.091370e-49 | -8.615850e-47 |
| Msa0032590 | Msa1463900 | 0.816555 | 5.206097e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032590 | MtrunA17_Chr1g0192441 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0032590 | AT2G40650.1 | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.77e-117 | 345 |
Find 131 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTATCTCTTTCCCTTGC+AGG | 0.202403 | 1_1:+59763608 | None:intergenic |
| GCATTCTATTTGCGTCTTAC+TGG | 0.216581 | 1_1:-59764698 | Msa0032590:CDS |
| TGAACTGTATGGCTTGAATT+TGG | 0.239668 | 1_1:-59761519 | Msa0032590:three_prime_UTR |
| AAAAGGAAAGGGACAGAGAT+AGG | 0.253347 | 1_1:-59761904 | Msa0032590:CDS |
| TCCTCAGCTCCATCTCTTCT+AGG | 0.306646 | 1_1:+59761680 | None:intergenic |
| TTCGATGACGATTTCTTTCT+CGG | 0.306868 | 1_1:+59764857 | None:intergenic |
| TCTATTAGTACTCTGATAAA+AGG | 0.308496 | 1_1:-59761238 | Msa0032590:three_prime_UTR |
| TGCACTTTGTCTAGGTTCTA+AGG | 0.312757 | 1_1:+59763811 | None:intergenic |
| ACATGAAGGGAGTGGGTTTC+CGG | 0.331461 | 1_1:+59764910 | None:intergenic |
| TACTGATGTGTATCATTATC+TGG | 0.333973 | 1_1:-59764669 | Msa0032590:CDS |
| GAAACTGCGGCGGAAATTAC+CGG | 0.336356 | 1_1:-59764624 | Msa0032590:CDS |
| CCTCGAATGCTCTTCGCTGC+TGG | 0.349121 | 1_1:+59765083 | None:intergenic |
| ATAGAGATCGGGACAGAGAT+AGG | 0.353256 | 1_1:-59761928 | Msa0032590:CDS |
| AGGCAATCAAAACAAATCTA+TGG | 0.355758 | 1_1:+59761327 | None:intergenic |
| CTGTTTGCTTCTGCAATCTC+TGG | 0.359328 | 1_1:+59761584 | None:intergenic |
| CCCTATCTCTTTCCCTTGCA+GGG | 0.370664 | 1_1:+59763609 | None:intergenic |
| AGATCTATCAGCACACATAT+TGG | 0.372870 | 1_1:-59765019 | Msa0032590:CDS |
| GCTTCTGCAATCTCTGGATC+TGG | 0.377528 | 1_1:+59761590 | None:intergenic |
| TGAGGAGGAAGAGGAGAATG+AGG | 0.386800 | 1_1:-59763774 | Msa0032590:CDS |
| GCCCTGCAAGGGAAAGAGAT+AGG | 0.391241 | 1_1:-59763610 | Msa0032590:CDS |
| ATGCAGGTATGTGAGGATAC+TGG | 0.405268 | 1_1:-59764723 | Msa0032590:intron |
| TGAATTGACAATTGCCGCTC+AGG | 0.407360 | 1_1:+59761417 | None:intergenic |
| TTTCTTCCCTCAGACGATAT+CGG | 0.414737 | 1_1:+59761867 | None:intergenic |
| CTGAGGGAAGAAAAGGATTA+TGG | 0.415767 | 1_1:-59761857 | Msa0032590:CDS |
| AGCCGTTGTATAATGATTAT+AGG | 0.416127 | 1_1:-59764646 | Msa0032590:CDS |
| GCTCCATGGCTTTGTCGACT+AGG | 0.420325 | 1_1:+59764964 | None:intergenic |
| AAAAGAAAAGAAGGAAAAGA+AGG | 0.422686 | 1_1:-59761630 | Msa0032590:CDS |
| GACCACCTCGGCGGCACTTA+CGG | 0.427204 | 1_1:-59764939 | Msa0032590:CDS |
| AGAGTGTTCAATTGATGTAA+TGG | 0.429494 | 1_1:-59761267 | Msa0032590:three_prime_UTR |
| AAAGGAAAGGGACAGAGATA+GGG | 0.437635 | 1_1:-59761903 | Msa0032590:CDS |
| TCTTCAAGTGCACTTTGTCT+AGG | 0.438667 | 1_1:+59763803 | None:intergenic |
| GGTTGTGAATCGTGATGAAT+TGG | 0.439341 | 1_1:+59765124 | None:intergenic |
| CAGAGATTGCAGAAGCAAAC+AGG | 0.439672 | 1_1:-59761583 | Msa0032590:CDS |
| GCGGCACTTACGGTGGCAAC+CGG | 0.442983 | 1_1:-59764929 | Msa0032590:CDS |
| TTGTATGATATAGATGATAA+AGG | 0.443676 | 1_1:+59761307 | None:intergenic |
| AAACAGGATACGAGCATCAC+TGG | 0.445067 | 1_1:-59761567 | Msa0032590:CDS |
| CTCCATGGCTTTGTCGACTA+GGG | 0.448233 | 1_1:+59764965 | None:intergenic |
| GCGGCAATTGTCAATTCAAC+AGG | 0.451593 | 1_1:-59761412 | Msa0032590:three_prime_UTR |
| CTCAATAACTTACGTCCATC+CGG | 0.452000 | 1_1:+59764605 | None:intergenic |
| AGAAAGGAAAGCACCTTCTC+AGG | 0.452898 | 1_1:+59763728 | None:intergenic |
| ACCTTCTCAGGCTCCTCAGC+AGG | 0.454985 | 1_1:+59763740 | None:intergenic |
| AGTTCAGATCACATCTTAAG+TGG | 0.458888 | 1_1:+59761536 | None:intergenic |
| AGGTGGACTCTTGAATCTCT+TGG | 0.461088 | 1_1:-59763836 | Msa0032590:CDS |
| AGAACAATGCTTCGGCTTAA+CGG | 0.471701 | 1_1:-59764994 | Msa0032590:CDS |
| CCAGCAGCGAAGAGCATTCG+AGG | 0.474837 | 1_1:-59765083 | Msa0032590:CDS |
| CTCTGTCCCGATCTCTATCT+CGG | 0.475661 | 1_1:+59761933 | None:intergenic |
| TGTATGGCTTGAATTTGGAC+TGG | 0.487500 | 1_1:-59761514 | Msa0032590:three_prime_UTR |
| CAAGGAGTCGAAGTAGAAGC+AGG | 0.498926 | 1_1:-59761763 | Msa0032590:CDS |
| TCGATGACGATTTCTTTCTC+GGG | 0.499616 | 1_1:+59764858 | None:intergenic |
| GAGAAGGCAGGGAGCGCGAG+AGG | 0.505596 | 1_1:-59761826 | Msa0032590:CDS |
| AGTGTAAGTCCTAGAAGAGA+TGG | 0.509676 | 1_1:-59761689 | Msa0032590:CDS |
| ATCGTGACCGTGGTAGGAGG+AGG | 0.511017 | 1_1:-59761793 | Msa0032590:CDS |
| ATATCGTCTGAGGGAAGAAA+AGG | 0.514906 | 1_1:-59761864 | Msa0032590:CDS |
| AACACTCTAGTTGTCAGTAC+AGG | 0.516645 | 1_1:+59761282 | None:intergenic |
| AAAGGGACAGAGATAGGGAG+AGG | 0.519341 | 1_1:-59761898 | Msa0032590:CDS |
| CAGAGATAGGGAAAAGGAAA+GGG | 0.522303 | 1_1:-59761915 | Msa0032590:CDS |
| TAGAGATCGGGACAGAGATA+GGG | 0.522697 | 1_1:-59761927 | Msa0032590:CDS |
| GCCGAGGTGGTCGAGCTCCA+TGG | 0.522793 | 1_1:+59764950 | None:intergenic |
| TATTGGAAAGAACAATGCTT+CGG | 0.527020 | 1_1:-59765002 | Msa0032590:CDS |
| AGAAGGAAAAGAAGGATGAC+GGG | 0.527671 | 1_1:-59761622 | Msa0032590:CDS |
| TGTAGGTGCAGCGGTATGCT+TGG | 0.533282 | 1_1:-59761361 | Msa0032590:three_prime_UTR |
| CTATGCCGCGGATTAAGAAA+AGG | 0.538102 | 1_1:-59764423 | Msa0032590:intron |
| TGCAGGTATGTGAGGATACT+GGG | 0.544095 | 1_1:-59764722 | Msa0032590:intron |
| CACCGTAAGTGCCGCCGAGG+TGG | 0.544664 | 1_1:+59764937 | None:intergenic |
| CACTGCTCTTGCGATATGAA+TGG | 0.549939 | 1_1:-59761197 | Msa0032590:three_prime_UTR |
| TAGACAAAGTGCACTTGAAG+AGG | 0.550517 | 1_1:-59763801 | Msa0032590:CDS |
| CCCTGCAAGGGAAAGAGATA+GGG | 0.555278 | 1_1:-59763609 | Msa0032590:CDS |
| GTATGGCTTGAATTTGGACT+GGG | 0.555839 | 1_1:-59761513 | Msa0032590:three_prime_UTR |
| ATGGTCGTGAGAGAGAAGGC+AGG | 0.557251 | 1_1:-59761838 | Msa0032590:CDS |
| TATGACAGAGAGCGTGGACG+TGG | 0.558775 | 1_1:-59761956 | Msa0032590:CDS |
| TCCTAGAAGAGATGGAGCTG+AGG | 0.561364 | 1_1:-59761681 | Msa0032590:CDS |
| TCGGGACAGAGATAGGGAAA+AGG | 0.563174 | 1_1:-59761921 | Msa0032590:CDS |
| GCCTGCTGAGGAGCCTGAGA+AGG | 0.563693 | 1_1:-59763741 | Msa0032590:intron |
| GACGAGGCACATGAAGGGAG+TGG | 0.564286 | 1_1:+59764902 | None:intergenic |
| AAGAAGGAAAAGAAGGATGA+CGG | 0.567699 | 1_1:-59761623 | Msa0032590:CDS |
| GACGTGGCCGAGATAGAGAT+CGG | 0.570627 | 1_1:-59761940 | Msa0032590:CDS |
| GATCGCAAGGAACATGATGG+TGG | 0.570891 | 1_1:-59761740 | Msa0032590:CDS |
| AATCGTGATGAATTGGATGA+TGG | 0.573412 | 1_1:+59765131 | None:intergenic |
| ATCGCAAGGAACATGATGGT+GGG | 0.574370 | 1_1:-59761739 | Msa0032590:CDS |
| ACAGAGATAGGGAAAAGGAA+AGG | 0.577809 | 1_1:-59761916 | Msa0032590:CDS |
| AACCCTAGTCGACAAAGCCA+TGG | 0.577816 | 1_1:-59764967 | Msa0032590:CDS |
| ACAGAGATCGTGACCGTGGT+AGG | 0.578698 | 1_1:-59761799 | Msa0032590:CDS |
| TGGATCAGTGCGATTTGCCA+TGG | 0.579045 | 1_1:+59765103 | None:intergenic |
| CTGCAATCTCTGGATCTGGA+TGG | 0.579331 | 1_1:+59761594 | None:intergenic |
| TGGTGAGCCAAAGAAGAAGA+AGG | 0.579870 | 1_1:-59761657 | Msa0032590:CDS |
| AGTAGCTCCTCCTCCTACCA+CGG | 0.582815 | 1_1:+59761786 | None:intergenic |
| AGAAGAGATGGAGCTGAGGA+TGG | 0.583701 | 1_1:-59761677 | Msa0032590:CDS |
| ATCGTGGGCGAAGCCCTGCA+AGG | 0.584499 | 1_1:-59763622 | Msa0032590:CDS |
| AAGTAGAAGCAGGGATCGCA+AGG | 0.585476 | 1_1:-59761753 | Msa0032590:CDS |
| TTTCATGACGAGGCACATGA+AGG | 0.588448 | 1_1:+59764896 | None:intergenic |
| GGCAATAGCATGTTACCTCA+AGG | 0.590742 | 1_1:-59761477 | Msa0032590:three_prime_UTR |
| AATCTCTGGATCTGGATGGT+CGG | 0.593545 | 1_1:+59761598 | None:intergenic |
| ACGTGGCCGAGATAGAGATC+GGG | 0.596361 | 1_1:-59761939 | Msa0032590:CDS |
| GTTTATAGGATTATCATCGT+GGG | 0.596566 | 1_1:-59763637 | Msa0032590:intron |
| ACAGAGACCGATATCGTCTG+AGG | 0.596802 | 1_1:-59761874 | Msa0032590:CDS |
| ACGAGGCACATGAAGGGAGT+GGG | 0.599318 | 1_1:+59764903 | None:intergenic |
| GAATTGACAATTGCCGCTCA+GGG | 0.600465 | 1_1:+59761418 | None:intergenic |
| GAGATCGTGACCGTGGTAGG+AGG | 0.602297 | 1_1:-59761796 | Msa0032590:CDS |
| TCGTGGGCGAAGCCCTGCAA+GGG | 0.603091 | 1_1:-59763621 | Msa0032590:CDS |
| TGGTCGTGAGAGAGAAGGCA+GGG | 0.605694 | 1_1:-59761837 | Msa0032590:CDS |
| TTCATGACGAGGCACATGAA+GGG | 0.606717 | 1_1:+59764897 | None:intergenic |
| TGCTTTGACACATGTTGATG+AGG | 0.607496 | 1_1:-59764488 | Msa0032590:CDS |
| GATTATGGTCGTGAGAGAGA+AGG | 0.609683 | 1_1:-59761842 | Msa0032590:CDS |
| GTAGGAGGAGGAGCTACTCA+AGG | 0.610437 | 1_1:-59761781 | Msa0032590:CDS |
| AAGGGACAGAGATAGGGAGA+GGG | 0.613155 | 1_1:-59761897 | Msa0032590:CDS |
| GGTTTATAGGATTATCATCG+TGG | 0.614925 | 1_1:-59763638 | Msa0032590:intron |
| AACAGGATACGAGCATCACT+GGG | 0.622392 | 1_1:-59761566 | Msa0032590:CDS |
| AAGATGTGATCTGAACTGTA+TGG | 0.623132 | 1_1:-59761530 | Msa0032590:exon |
| AGAGATTATGACAGAGAGCG+TGG | 0.623322 | 1_1:-59761962 | Msa0032590:CDS |
| TTCCTATAATCATTATACAA+CGG | 0.623715 | 1_1:+59764644 | None:intergenic |
| AAGGAGTCGAAGTAGAAGCA+GGG | 0.630233 | 1_1:-59761762 | Msa0032590:CDS |
| AGGGATCGCAAGGAACATGA+TGG | 0.633153 | 1_1:-59761743 | Msa0032590:CDS |
| TGCCACCGTAAGTGCCGCCG+AGG | 0.634024 | 1_1:+59764934 | None:intergenic |
| CACCTCGGCGGCACTTACGG+TGG | 0.637349 | 1_1:-59764936 | Msa0032590:CDS |
| AGAGACAGAGATCGTGACCG+TGG | 0.637818 | 1_1:-59761803 | Msa0032590:CDS |
| CAGAGACCGATATCGTCTGA+GGG | 0.649302 | 1_1:-59761873 | Msa0032590:CDS |
| GGATAATGAACAGCCTGCTG+AGG | 0.651475 | 1_1:-59763753 | Msa0032590:CDS |
| TTCATCACGATTCACAACCA+TGG | 0.652686 | 1_1:-59765120 | Msa0032590:exon |
| ATGTACTTGTGTAGGTGCAG+CGG | 0.660123 | 1_1:-59761370 | Msa0032590:three_prime_UTR |
| CTGCGGCGGAAATTACCGGA+TGG | 0.660635 | 1_1:-59764620 | Msa0032590:CDS |
| GGACTGGGTTACAAAAGACA+AGG | 0.668930 | 1_1:-59761498 | Msa0032590:three_prime_UTR |
| ATACAAGTATGTACTTGTGT+AGG | 0.675592 | 1_1:-59761378 | Msa0032590:three_prime_UTR |
| GACGTGATAGTCATAGACAC+AGG | 0.680693 | 1_1:-59763580 | Msa0032590:intron |
| TCGCAAGGAACATGATGGTG+GGG | 0.683038 | 1_1:-59761738 | Msa0032590:CDS |
| GCCATGGAGCTCGACCACCT+CGG | 0.691184 | 1_1:-59764951 | Msa0032590:CDS |
| ATGATTATAGGAAACTGCGG+CGG | 0.708986 | 1_1:-59764634 | Msa0032590:CDS |
| GTCAAACGTCACAAACCTTG+AGG | 0.710882 | 1_1:+59761462 | None:intergenic |
| ATAATGATTATAGGAAACTG+CGG | 0.718715 | 1_1:-59764637 | Msa0032590:CDS |
| TGTGCTGATAGATCTTTGAA+CGG | 0.719231 | 1_1:+59765027 | None:intergenic |
| GCTGTGATATTGCTATGCCG+CGG | 0.720225 | 1_1:-59764435 | Msa0032590:CDS |
| ATGGAGCTCGACCACCTCGG+CGG | 0.724394 | 1_1:-59764948 | Msa0032590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAGAAACATATATT+TGG | + | chr1_1:59764160-59764179 | None:intergenic | 10.0% |
| !!! | TAATATTTTTTGAAAAATGC+AGG | - | chr1_1:59761623-59761642 | Msa0032590:CDS | 15.0% |
| !! | TTCCTTTATTAAATAAATGT+TGG | - | chr1_1:59763223-59763242 | Msa0032590:intron | 15.0% |
| !! | ATCCAACATTTATTTAATAA+AGG | + | chr1_1:59763228-59763247 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTGATTTATAGA+TGG | - | chr1_1:59763953-59763972 | Msa0032590:intron | 15.0% |
| !! | TTCCTATAATCATTATACAA+CGG | + | chr1_1:59761721-59761740 | None:intergenic | 20.0% |
| !!! | TTTACAGTTTCATATTTTTG+TGG | - | chr1_1:59762467-59762486 | Msa0032590:intron | 20.0% |
| !!! | ACTTCTTTTTATTTGCTTTT+TGG | - | chr1_1:59762890-59762909 | Msa0032590:intron | 20.0% |
| !!! | CTTCTTTTTATTTGCTTTTT+GGG | - | chr1_1:59762891-59762910 | Msa0032590:intron | 20.0% |
| !! | TAAATAGGATCATAATAACA+GGG | + | chr1_1:59763188-59763207 | None:intergenic | 20.0% |
| !! | ATAAATAGGATCATAATAAC+AGG | + | chr1_1:59763189-59763208 | None:intergenic | 20.0% |
| !! | AATCCAAATCTTCTATAAAT+AGG | + | chr1_1:59763203-59763222 | None:intergenic | 20.0% |
| !!! | ATTGCCTATTTTTTTTAATC+TGG | - | chr1_1:59763254-59763273 | Msa0032590:intron | 20.0% |
| !!! | TTGCCTATTTTTTTTAATCT+GGG | - | chr1_1:59763255-59763274 | Msa0032590:intron | 20.0% |
| !! | AAAATTAATAATTCTCCACT+TGG | - | chr1_1:59763281-59763300 | Msa0032590:intron | 20.0% |
| !! | ATCCTGTATTTCATAAAAAT+TGG | - | chr1_1:59763521-59763540 | Msa0032590:intron | 20.0% |
| !! | TCCTGTATTTCATAAAAATT+GGG | - | chr1_1:59763522-59763541 | Msa0032590:intron | 20.0% |
| !!! | TTTTTAGTTTTTTGTTAGAG+AGG | - | chr1_1:59763824-59763843 | Msa0032590:CDS | 20.0% |
| !! | TTAAAGTGACATGTAATAAT+TGG | + | chr1_1:59763869-59763888 | None:intergenic | 20.0% |
| !! | ATGATAACATCAATGATAAA+AGG | + | chr1_1:59763979-59763998 | None:intergenic | 20.0% |
| !! | TAAAAGAAACATATATTTGG+CGG | + | chr1_1:59764157-59764176 | None:intergenic | 20.0% |
| !!! | TCATTAGTGATAAATTTTGT+TGG | - | chr1_1:59764306-59764325 | Msa0032590:intron | 20.0% |
| !!! | TTACTAAACTTTTGCTTTTT+TGG | - | chr1_1:59764335-59764354 | Msa0032590:intron | 20.0% |
| !! | TTGTATGATATAGATGATAA+AGG | + | chr1_1:59765058-59765077 | None:intergenic | 20.0% |
| !!! | TTTTTTCAACAAGGTTTTGA+GGG | + | chr1_1:59761311-59761330 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAACAAGGTTTTG+AGG | + | chr1_1:59761312-59761331 | None:intergenic | 25.0% |
| ! | AAAATCCGAAACTAAAAAGA+GGG | + | chr1_1:59761561-59761580 | None:intergenic | 25.0% |
| ! | ATAATGATTATAGGAAACTG+CGG | - | chr1_1:59761725-59761744 | Msa0032590:CDS | 25.0% |
| !!! | GTTCTTTCTTTTTTCTCTAT+TGG | - | chr1_1:59761982-59762001 | Msa0032590:CDS | 25.0% |
| !! | TCTACTATCTTTTCTACTAT+AGG | + | chr1_1:59762065-59762084 | None:intergenic | 25.0% |
| !!! | TTGTCTTTTGTTTTCTTTGT+AGG | - | chr1_1:59762360-59762379 | Msa0032590:intron | 25.0% |
| ! | ACTGTAAACTAATCATACAA+GGG | + | chr1_1:59762455-59762474 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCATACA+AGG | + | chr1_1:59762456-59762475 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTTGTTTTTTGC+AGG | - | chr1_1:59762506-59762525 | Msa0032590:intron | 25.0% |
| ! | AAAAGTAGATTGCTTAAGAA+AGG | + | chr1_1:59762653-59762672 | None:intergenic | 25.0% |
| ! | TTGATTGTTGAATGGTTTAT+AGG | - | chr1_1:59762711-59762730 | Msa0032590:intron | 25.0% |
| ! | GATCCTATTTATAGAAGATT+TGG | - | chr1_1:59763197-59763216 | Msa0032590:intron | 25.0% |
| !!! | TGCCTATTTTTTTTAATCTG+GGG | - | chr1_1:59763256-59763275 | Msa0032590:intron | 25.0% |
| ! | AACCCCAGATTAAAAAAAAT+AGG | + | chr1_1:59763261-59763280 | None:intergenic | 25.0% |
| !!! | TGTTTCCTTTTTTAAAGCTT+CGG | + | chr1_1:59763424-59763443 | None:intergenic | 25.0% |
| ! | CCTGTATTTCATAAAAATTG+GGG | - | chr1_1:59763523-59763542 | Msa0032590:intron | 25.0% |
| ! | CTGTATTTCATAAAAATTGG+GGG | - | chr1_1:59763524-59763543 | Msa0032590:intron | 25.0% |
| ! | TGTATTTCATAAAAATTGGG+GGG | - | chr1_1:59763525-59763544 | Msa0032590:intron | 25.0% |
| !!! | AGTGTTTTTATAACTGTTCA+AGG | + | chr1_1:59763727-59763746 | None:intergenic | 25.0% |
| ! | TATCTCAGTTACATATTTGA+CGG | + | chr1_1:59763788-59763807 | None:intergenic | 25.0% |
| ! | CATTTAACTCAAAAAAACCA+CGG | + | chr1_1:59764277-59764296 | None:intergenic | 25.0% |
| !!! | TTTTTTTCCTTCTTCTTCTT+TGG | + | chr1_1:59764715-59764734 | None:intergenic | 25.0% |
| ! | GAAGGAAAAAAAAGAAAAGA+AGG | - | chr1_1:59764723-59764742 | Msa0032590:intron | 25.0% |
| ! | AAAAGAAAAGAAGGAAAAGA+AGG | - | chr1_1:59764732-59764751 | Msa0032590:intron | 25.0% |
| ! | TCTATTAGTACTCTGATAAA+AGG | - | chr1_1:59765124-59765143 | Msa0032590:five_prime_UTR | 25.0% |
| !!! | AACGGAGAATTTTTTCAACA+AGG | + | chr1_1:59761320-59761339 | None:intergenic | 30.0% |
| TATTGGAAAGAACAATGCTT+CGG | - | chr1_1:59761360-59761379 | Msa0032590:three_prime_UTR | 30.0% | |
| !!! | AATTCCCCTCTTTTTAGTTT+CGG | - | chr1_1:59761553-59761572 | Msa0032590:CDS | 30.0% |
| AAATCCGAAACTAAAAAGAG+GGG | + | chr1_1:59761560-59761579 | None:intergenic | 30.0% | |
| GAAAATCCGAAACTAAAAAG+AGG | + | chr1_1:59761562-59761581 | None:intergenic | 30.0% | |
| ! | TTAGTTTCGGATTTTCATTC+TGG | - | chr1_1:59761566-59761585 | Msa0032590:CDS | 30.0% |
| ! | TAGTTTCGGATTTTCATTCT+GGG | - | chr1_1:59761567-59761586 | Msa0032590:CDS | 30.0% |
| TACTGATGTGTATCATTATC+TGG | - | chr1_1:59761693-59761712 | Msa0032590:CDS | 30.0% | |
| AGCCGTTGTATAATGATTAT+AGG | - | chr1_1:59761716-59761735 | Msa0032590:CDS | 30.0% | |
| ! | TAATACCTTTTCTTAATCCG+CGG | + | chr1_1:59761947-59761966 | None:intergenic | 30.0% |
| !! | GTTTAGTTATTTTGCTTGCT+TGG | - | chr1_1:59762008-59762027 | Msa0032590:intron | 30.0% |
| AACAACATTAGATAGAGAGT+TGG | - | chr1_1:59762032-59762051 | Msa0032590:intron | 30.0% | |
| ACAACATTAGATAGAGAGTT+GGG | - | chr1_1:59762033-59762052 | Msa0032590:intron | 30.0% | |
| ATAGTAGAAACTAGACTTCA+GGG | - | chr1_1:59762077-59762096 | Msa0032590:intron | 30.0% | |
| GTTTCGCTAATAGTATTTCT+AGG | + | chr1_1:59762187-59762206 | None:intergenic | 30.0% | |
| ! | TGGTTTTTGATAGAAGACTA+TGG | - | chr1_1:59762247-59762266 | Msa0032590:intron | 30.0% |
| !! | TTTGTAGGATTTTGAGTAGT+AGG | - | chr1_1:59762375-59762394 | Msa0032590:intron | 30.0% |
| GTTTATAGGATTATCATCGT+GGG | - | chr1_1:59762725-59762744 | Msa0032590:intron | 30.0% | |
| AGGATAGCTATTTAAATGAC+GGG | + | chr1_1:59762867-59762886 | None:intergenic | 30.0% | |
| CAGGATAGCTATTTAAATGA+CGG | + | chr1_1:59762868-59762887 | None:intergenic | 30.0% | |
| !! | AGCAAATAAAAAGAAGTACC+AGG | + | chr1_1:59762887-59762906 | None:intergenic | 30.0% |
| TTATACATCTATTTCCACTG+CGG | - | chr1_1:59763029-59763048 | Msa0032590:intron | 30.0% | |
| GGATCATTGAACTTTACTAT+AGG | + | chr1_1:59763087-59763106 | None:intergenic | 30.0% | |
| ATCAAACAGTTATGTTGCAT+TGG | - | chr1_1:59763154-59763173 | Msa0032590:intron | 30.0% | |
| ATAGTCATAATTCAACCAAG+TGG | + | chr1_1:59763299-59763318 | None:intergenic | 30.0% | |
| TATGACTATTGAACATCCAT+TGG | - | chr1_1:59763310-59763329 | Msa0032590:intron | 30.0% | |
| CATCAAATTAAACTCTCCAA+TGG | + | chr1_1:59763329-59763348 | None:intergenic | 30.0% | |
| !! | TTCTTCCGAAGCTTTAAAAA+AGG | - | chr1_1:59763416-59763435 | Msa0032590:intron | 30.0% |
| ! | CCCCAATTTTTATGAAATAC+AGG | + | chr1_1:59763526-59763545 | None:intergenic | 30.0% |
| GTTAAAATACGTTTCAGAAG+TGG | - | chr1_1:59763592-59763611 | Msa0032590:CDS | 30.0% | |
| TACTAACATGCTGATATAGA+GGG | + | chr1_1:59763758-59763777 | None:intergenic | 30.0% | |
| ! | AATTTCTCTCCTTGTGATTT+TGG | - | chr1_1:59764059-59764078 | Msa0032590:intron | 30.0% |
| !!! | CGTGGTTTTTTTGAGTTAAA+TGG | - | chr1_1:59764275-59764294 | Msa0032590:intron | 30.0% |
| !!! | TTTTTTGGTGTCCTTTTCAT+AGG | - | chr1_1:59764350-59764369 | Msa0032590:intron | 30.0% |
| !!! | TTTTTGGTGTCCTTTTCATA+GGG | - | chr1_1:59764351-59764370 | Msa0032590:intron | 30.0% |
| ATACAAGTATGTACTTGTGT+AGG | - | chr1_1:59764984-59765003 | Msa0032590:CDS | 30.0% | |
| AGGCAATCAAAACAAATCTA+TGG | + | chr1_1:59765038-59765057 | None:intergenic | 30.0% | |
| ! | AGAGTGTTCAATTGATGTAA+TGG | - | chr1_1:59765095-59765114 | Msa0032590:CDS | 30.0% |
| AAAGGAAAAGAAAAACGTTG+TGG | - | chr1_1:59765142-59765161 | Msa0032590:five_prime_UTR | 30.0% | |
| !!! | AAAACTACATCGTTTTGGAG+AGG | - | chr1_1:59761185-59761204 | Msa0032590:three_prime_UTR | 35.0% |
| AATCGTGATGAATTGGATGA+TGG | + | chr1_1:59761234-59761253 | None:intergenic | 35.0% | |
| ! | TGTGCTGATAGATCTTTGAA+CGG | + | chr1_1:59761338-59761357 | None:intergenic | 35.0% |
| AGATCTATCAGCACACATAT+TGG | - | chr1_1:59761343-59761362 | Msa0032590:three_prime_UTR | 35.0% | |
| TTCGATGACGATTTCTTTCT+CGG | + | chr1_1:59761508-59761527 | None:intergenic | 35.0% | |
| TTGAAAAATGCAGGTATGTG+AGG | - | chr1_1:59761632-59761651 | Msa0032590:CDS | 35.0% | |
| CAACATTAGATAGAGAGTTG+GGG | - | chr1_1:59762034-59762053 | Msa0032590:intron | 35.0% | |
| GATAGTAGAAACTAGACTTC+AGG | - | chr1_1:59762076-59762095 | Msa0032590:intron | 35.0% | |
| AGATCTAGAGATCAATGAGT+TGG | - | chr1_1:59762215-59762234 | Msa0032590:intron | 35.0% | |
| GTAAACTAATCATACAAGGG+AGG | + | chr1_1:59762452-59762471 | None:intergenic | 35.0% | |
| !!! | TGTCATTTGTTTTTTGCAGG+TGG | - | chr1_1:59762509-59762528 | Msa0032590:intron | 35.0% |
| TGAATGTGATTCTGATGTTC+TGG | - | chr1_1:59762687-59762706 | Msa0032590:intron | 35.0% | |
| !! | GTTCTGGTTTGATTGTTGAA+TGG | - | chr1_1:59762703-59762722 | Msa0032590:intron | 35.0% |
| GGTTTATAGGATTATCATCG+TGG | - | chr1_1:59762724-59762743 | Msa0032590:intron | 35.0% | |
| GAAGTAACAGCACATTTACA+AGG | + | chr1_1:59762820-59762839 | None:intergenic | 35.0% | |
| CGTCATTTAAATAGCTATCC+TGG | - | chr1_1:59762866-59762885 | Msa0032590:intron | 35.0% | |
| ! | TTGTGCATGAGTGTATCTTT+TGG | - | chr1_1:59762929-59762948 | Msa0032590:intron | 35.0% |
| ! | TGTGCATGAGTGTATCTTTT+GGG | - | chr1_1:59762930-59762949 | Msa0032590:intron | 35.0% |
| !! | TGTATCTTTTGGGTCTATGT+TGG | - | chr1_1:59762940-59762959 | Msa0032590:intron | 35.0% |
| AAGCAGTTGTATACCACAAA+TGG | + | chr1_1:59763064-59763083 | None:intergenic | 35.0% | |
| GCGATATTATCTTTATGCGA+AGG | - | chr1_1:59763547-59763566 | Msa0032590:intron | 35.0% | |
| !!! | GTATTTTAACGCCCAAAAGT+TGG | + | chr1_1:59763582-59763601 | None:intergenic | 35.0% |
| GAGATTCCTAGCATATCATA+AGG | - | chr1_1:59763628-59763647 | Msa0032590:CDS | 35.0% | |
| AAGTTCAGATGTTCGAGAAA+GGG | + | chr1_1:59763656-59763675 | None:intergenic | 35.0% | |
| AAAGTTCAGATGTTCGAGAA+AGG | + | chr1_1:59763657-59763676 | None:intergenic | 35.0% | |
| ! | CACAAGAGTGTGAAAAACAT+AGG | - | chr1_1:59763677-59763696 | Msa0032590:intron | 35.0% |
| GTACTAACATGCTGATATAG+AGG | + | chr1_1:59763759-59763778 | None:intergenic | 35.0% | |
| !!! | TTTTTGTTAGAGAGGCATTG+TGG | - | chr1_1:59763832-59763851 | Msa0032590:CDS | 35.0% |
| CATGCACATATGCATCTAAA+TGG | - | chr1_1:59763900-59763919 | Msa0032590:intron | 35.0% | |
| CATCTAAATGGTGGTAAAGT+TGG | - | chr1_1:59763912-59763931 | Msa0032590:intron | 35.0% | |
| ! | GATTTGCTCTTCGTAGTATA+AGG | + | chr1_1:59764097-59764116 | None:intergenic | 35.0% |
| CATATATTTGGCGGAAATCA+CGG | + | chr1_1:59764148-59764167 | None:intergenic | 35.0% | |
| TGTGATATAGCATCACTGTT+TGG | - | chr1_1:59764244-59764263 | Msa0032590:intron | 35.0% | |
| AAGAAGGAAAAGAAGGATGA+CGG | - | chr1_1:59764739-59764758 | Msa0032590:intron | 35.0% | |
| AGTTCAGATCACATCTTAAG+TGG | + | chr1_1:59764829-59764848 | None:intergenic | 35.0% | |
| AAGATGTGATCTGAACTGTA+TGG | - | chr1_1:59764832-59764851 | Msa0032590:intron | 35.0% | |
| TGAACTGTATGGCTTGAATT+TGG | - | chr1_1:59764843-59764862 | Msa0032590:CDS | 35.0% | |
| !!! | ACATCGTTTTGGAGAGGATT+AGG | - | chr1_1:59761191-59761210 | Msa0032590:three_prime_UTR | 40.0% |
| !!! | CATCGTTTTGGAGAGGATTA+GGG | - | chr1_1:59761192-59761211 | Msa0032590:three_prime_UTR | 40.0% |
| GGTTGTGAATCGTGATGAAT+TGG | + | chr1_1:59761241-59761260 | None:intergenic | 40.0% | |
| TTCATCACGATTCACAACCA+TGG | - | chr1_1:59761242-59761261 | Msa0032590:three_prime_UTR | 40.0% | |
| AGAACAATGCTTCGGCTTAA+CGG | - | chr1_1:59761368-59761387 | Msa0032590:three_prime_UTR | 40.0% | |
| !! | TCTGAAGCATTTTCATGACG+AGG | + | chr1_1:59761479-59761498 | None:intergenic | 40.0% |
| TCGATGACGATTTCTTTCTC+GGG | + | chr1_1:59761507-59761526 | None:intergenic | 40.0% | |
| GCATTCTATTTGCGTCTTAC+TGG | - | chr1_1:59761664-59761683 | Msa0032590:CDS | 40.0% | |
| ATGATTATAGGAAACTGCGG+CGG | - | chr1_1:59761728-59761747 | Msa0032590:CDS | 40.0% | |
| CTCAATAACTTACGTCCATC+CGG | + | chr1_1:59761760-59761779 | None:intergenic | 40.0% | |
| TGCTTTGACACATGTTGATG+AGG | - | chr1_1:59761874-59761893 | Msa0032590:CDS | 40.0% | |
| GCATGTAGAGAGAAAACTTG+TGG | - | chr1_1:59762099-59762118 | Msa0032590:intron | 40.0% | |
| GGTAAGGAGAGTAAATCAGA+TGG | - | chr1_1:59762129-59762148 | Msa0032590:intron | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | - | chr1_1:59762132-59762151 | Msa0032590:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | - | chr1_1:59762133-59762152 | Msa0032590:intron | 40.0% | |
| ! | CAATGAGTTGGAGAAACACA+TGG | - | chr1_1:59762227-59762246 | Msa0032590:intron | 40.0% |
| ! | GGATAAGGCTTGGTTATTGT+CGG | - | chr1_1:59762305-59762324 | Msa0032590:intron | 40.0% |
| TACTCTGTGCTTTGCATGAT+AGG | - | chr1_1:59762332-59762351 | Msa0032590:intron | 40.0% | |
| !! | AGGATTTTGAGTAGTAGGTG+AGG | - | chr1_1:59762380-59762399 | Msa0032590:intron | 40.0% |
| AGGATAGAGAAGCAAGACAA+AGG | + | chr1_1:59762432-59762451 | None:intergenic | 40.0% | |
| TGCACTTTGTCTAGGTTCTA+AGG | + | chr1_1:59762554-59762573 | None:intergenic | 40.0% | |
| TCTTCAAGTGCACTTTGTCT+AGG | + | chr1_1:59762562-59762581 | None:intergenic | 40.0% | |
| TAGACAAAGTGCACTTGAAG+AGG | - | chr1_1:59762561-59762580 | Msa0032590:intron | 40.0% | |
| ! | TGCACTTGAAGAGGATTTTG+AGG | - | chr1_1:59762570-59762589 | Msa0032590:intron | 40.0% |
| !! | ACTTGAAGAGGATTTTGAGG+AGG | - | chr1_1:59762573-59762592 | Msa0032590:intron | 40.0% |
| TAAAGTTCAATGATCCTGCC+AGG | - | chr1_1:59763091-59763110 | Msa0032590:intron | 40.0% | |
| ! | TGTGCAGTTGAGAAGTATGA+TGG | - | chr1_1:59763131-59763150 | Msa0032590:intron | 40.0% |
| TATCTTCAGTTGTCGAAGTG+CGG | - | chr1_1:59763465-59763484 | Msa0032590:intron | 40.0% | |
| TTAACGCCCAAAAGTTGGAT+AGG | + | chr1_1:59763577-59763596 | None:intergenic | 40.0% | |
| AGGGAACCTTATGATATGCT+AGG | + | chr1_1:59763637-59763656 | None:intergenic | 40.0% | |
| ATAACTGTTCAAGGACTGCA+GGG | + | chr1_1:59763718-59763737 | None:intergenic | 40.0% | |
| TATAACTGTTCAAGGACTGC+AGG | + | chr1_1:59763719-59763738 | None:intergenic | 40.0% | |
| GCACATATGCATCTAAATGG+TGG | - | chr1_1:59763903-59763922 | Msa0032590:intron | 40.0% | |
| ! | TCTCCTTGTGATTTTGGATG+AGG | - | chr1_1:59764065-59764084 | Msa0032590:intron | 40.0% |
| ! | CTCCTTGTGATTTTGGATGA+GGG | - | chr1_1:59764066-59764085 | Msa0032590:intron | 40.0% |
| TTCCCTCATCCAAAATCACA+AGG | + | chr1_1:59764071-59764090 | None:intergenic | 40.0% | |
| AACTGAAATGTACTGTGTCG+TGG | - | chr1_1:59764200-59764219 | Msa0032590:intron | 40.0% | |
| TAGTCACGATCCCTATGAAA+AGG | + | chr1_1:59764364-59764383 | None:intergenic | 40.0% | |
| ACAGAGATAGGGAAAAGGAA+AGG | - | chr1_1:59764446-59764465 | Msa0032590:CDS | 40.0% | |
| CAGAGATAGGGAAAAGGAAA+GGG | - | chr1_1:59764447-59764466 | Msa0032590:CDS | 40.0% | |
| AAAAGGAAAGGGACAGAGAT+AGG | - | chr1_1:59764458-59764477 | Msa0032590:CDS | 40.0% | |
| AAAGGAAAGGGACAGAGATA+GGG | - | chr1_1:59764459-59764478 | Msa0032590:CDS | 40.0% | |
| TTTCTTCCCTCAGACGATAT+CGG | + | chr1_1:59764498-59764517 | None:intergenic | 40.0% | |
| ATATCGTCTGAGGGAAGAAA+AGG | - | chr1_1:59764498-59764517 | Msa0032590:intron | 40.0% | |
| CTGAGGGAAGAAAAGGATTA+TGG | - | chr1_1:59764505-59764524 | Msa0032590:intron | 40.0% | |
| AGTGTAAGTCCTAGAAGAGA+TGG | - | chr1_1:59764673-59764692 | Msa0032590:CDS | 40.0% | |
| AGAAGGAAAAGAAGGATGAC+GGG | - | chr1_1:59764740-59764759 | Msa0032590:intron | 40.0% | |
| TGTATGGCTTGAATTTGGAC+TGG | - | chr1_1:59764848-59764867 | Msa0032590:CDS | 40.0% | |
| GTATGGCTTGAATTTGGACT+GGG | - | chr1_1:59764849-59764868 | Msa0032590:CDS | 40.0% | |
| AACACTCTAGTTGTCAGTAC+AGG | + | chr1_1:59765083-59765102 | None:intergenic | 40.0% | |
| TTCATGACGAGGCACATGAA+GGG | + | chr1_1:59761468-59761487 | None:intergenic | 45.0% | |
| TTTCATGACGAGGCACATGA+AGG | + | chr1_1:59761469-59761488 | None:intergenic | 45.0% | |
| ATGCAGGTATGTGAGGATAC+TGG | - | chr1_1:59761639-59761658 | Msa0032590:CDS | 45.0% | |
| TGCAGGTATGTGAGGATACT+GGG | - | chr1_1:59761640-59761659 | Msa0032590:CDS | 45.0% | |
| ! | CTATGCCGCGGATTAAGAAA+AGG | - | chr1_1:59761939-59761958 | Msa0032590:CDS | 45.0% |
| GAGAAAACTTGTGGATGCTG+CGG | - | chr1_1:59762108-59762127 | Msa0032590:intron | 45.0% | |
| GGAGAGTAAATCAGATGGAG+GGG | - | chr1_1:59762134-59762153 | Msa0032590:intron | 45.0% | |
| GGTGTCAAATCACTAGAGGT+AGG | - | chr1_1:59762155-59762174 | Msa0032590:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_1:59762296-59762315 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_1:59762297-59762316 | None:intergenic | 45.0% |
| ! | AGGTGGACTCTTGAATCTCT+TGG | - | chr1_1:59762526-59762545 | Msa0032590:intron | 45.0% |
| !! | AGAGGATTTTGAGGAGGAAG+AGG | - | chr1_1:59762579-59762598 | Msa0032590:intron | 45.0% |
| !! | AGAAAGGAAAGCACCTTCTC+AGG | + | chr1_1:59762637-59762656 | None:intergenic | 45.0% |
| GACGTGATAGTCATAGACAC+AGG | - | chr1_1:59762782-59762801 | Msa0032590:intron | 45.0% | |
| ACATAGTGTGTGTGTGAGCA+GGG | + | chr1_1:59762991-59763010 | None:intergenic | 45.0% | |
| TACATAGTGTGTGTGTGAGC+AGG | + | chr1_1:59762992-59763011 | None:intergenic | 45.0% | |
| ! | AGGCCATCCTATCCAACTTT+TGG | - | chr1_1:59763567-59763586 | Msa0032590:intron | 45.0% |
| ! | GGCCATCCTATCCAACTTTT+GGG | - | chr1_1:59763568-59763587 | Msa0032590:intron | 45.0% |
| !! | TTGTTAGAGAGGCATTGTGG+TGG | - | chr1_1:59763835-59763854 | Msa0032590:CDS | 45.0% |
| !! | GGTGGTAAAGTTGGTACTGA+TGG | - | chr1_1:59763921-59763940 | Msa0032590:intron | 45.0% |
| AGAGATTATGACAGAGAGCG+TGG | - | chr1_1:59764400-59764419 | Msa0032590:intron | 45.0% | |
| ATAGAGATCGGGACAGAGAT+AGG | - | chr1_1:59764434-59764453 | Msa0032590:CDS | 45.0% | |
| TAGAGATCGGGACAGAGATA+GGG | - | chr1_1:59764435-59764454 | Msa0032590:CDS | 45.0% | |
| GATTATGGTCGTGAGAGAGA+AGG | - | chr1_1:59764520-59764539 | Msa0032590:intron | 45.0% | |
| AAGGAGTCGAAGTAGAAGCA+GGG | - | chr1_1:59764600-59764619 | Msa0032590:intron | 45.0% | |
| ATCGCAAGGAACATGATGGT+GGG | - | chr1_1:59764623-59764642 | Msa0032590:CDS | 45.0% | |
| TGGTGAGCCAAAGAAGAAGA+AGG | - | chr1_1:59764705-59764724 | Msa0032590:CDS | 45.0% | |
| AATCTCTGGATCTGGATGGT+CGG | + | chr1_1:59764767-59764786 | None:intergenic | 45.0% | |
| CTGTTTGCTTCTGCAATCTC+TGG | + | chr1_1:59764781-59764800 | None:intergenic | 45.0% | |
| CAGAGATTGCAGAAGCAAAC+AGG | - | chr1_1:59764779-59764798 | Msa0032590:intron | 45.0% | |
| AAACAGGATACGAGCATCAC+TGG | - | chr1_1:59764795-59764814 | Msa0032590:intron | 45.0% | |
| AACAGGATACGAGCATCACT+GGG | - | chr1_1:59764796-59764815 | Msa0032590:intron | 45.0% | |
| GGACTGGGTTACAAAAGACA+AGG | - | chr1_1:59764864-59764883 | Msa0032590:CDS | 45.0% | |
| GGCAATAGCATGTTACCTCA+AGG | - | chr1_1:59764885-59764904 | Msa0032590:CDS | 45.0% | |
| GTCAAACGTCACAAACCTTG+AGG | + | chr1_1:59764903-59764922 | None:intergenic | 45.0% | |
| ! | AGTTTTTGTACTGCCCTGAG+CGG | - | chr1_1:59764931-59764950 | Msa0032590:CDS | 45.0% |
| GAATTGACAATTGCCGCTCA+GGG | + | chr1_1:59764947-59764966 | None:intergenic | 45.0% | |
| TGAATTGACAATTGCCGCTC+AGG | + | chr1_1:59764948-59764967 | None:intergenic | 45.0% | |
| GCGGCAATTGTCAATTCAAC+AGG | - | chr1_1:59764950-59764969 | Msa0032590:CDS | 45.0% | |
| ATGTACTTGTGTAGGTGCAG+CGG | - | chr1_1:59764992-59765011 | Msa0032590:CDS | 45.0% | |
| CACTGCTCTTGCGATATGAA+TGG | - | chr1_1:59765165-59765184 | Msa0032590:five_prime_UTR | 45.0% | |
| TGGATCAGTGCGATTTGCCA+TGG | + | chr1_1:59761262-59761281 | None:intergenic | 50.0% | |
| AACCCTAGTCGACAAAGCCA+TGG | - | chr1_1:59761395-59761414 | Msa0032590:three_prime_UTR | 50.0% | |
| !! | CTCCATGGCTTTGTCGACTA+GGG | + | chr1_1:59761400-59761419 | None:intergenic | 50.0% |
| ! | ACATGAAGGGAGTGGGTTTC+CGG | + | chr1_1:59761455-59761474 | None:intergenic | 50.0% |
| GAAACTGCGGCGGAAATTAC+CGG | - | chr1_1:59761738-59761757 | Msa0032590:CDS | 50.0% | |
| GCTGTGATATTGCTATGCCG+CGG | - | chr1_1:59761927-59761946 | Msa0032590:CDS | 50.0% | |
| AACTTGTGGATGCTGCGGTA+AGG | - | chr1_1:59762113-59762132 | Msa0032590:intron | 50.0% | |
| !! | GAGGGGTGTCAAATCACTAG+AGG | - | chr1_1:59762151-59762170 | Msa0032590:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_1:59762292-59762311 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_1:59762298-59762317 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_1:59762295-59762314 | Msa0032590:intron | 50.0% | |
| TGAGGAGGAAGAGGAGAATG+AGG | - | chr1_1:59762588-59762607 | Msa0032590:intron | 50.0% | |
| GGATAATGAACAGCCTGCTG+AGG | - | chr1_1:59762609-59762628 | Msa0032590:intron | 50.0% | |
| CCCTATCTCTTTCCCTTGCA+GGG | + | chr1_1:59762756-59762775 | None:intergenic | 50.0% | |
| CCCTGCAAGGGAAAGAGATA+GGG | - | chr1_1:59762753-59762772 | Msa0032590:intron | 50.0% | |
| TCCCTATCTCTTTCCCTTGC+AGG | + | chr1_1:59762757-59762776 | None:intergenic | 50.0% | |
| AATGGCTCTTTATGCCGCAG+TGG | + | chr1_1:59763046-59763065 | None:intergenic | 50.0% | |
| GCGGCATAAAGAGCCATTTG+TGG | - | chr1_1:59763048-59763067 | Msa0032590:intron | 50.0% | |
| ACTGTCAGTGCAGAGAAACC+TGG | + | chr1_1:59763112-59763131 | None:intergenic | 50.0% | |
| CGCCCAAAAGTTGGATAGGA+TGG | + | chr1_1:59763573-59763592 | None:intergenic | 50.0% | |
| ! | GTACTGTGTCGTGGTTTTCG+TGG | - | chr1_1:59764209-59764228 | Msa0032590:intron | 50.0% |
| CACTGTTTGGATAACGTCCG+TGG | - | chr1_1:59764257-59764276 | Msa0032590:intron | 50.0% | |
| CTCTGTCCCGATCTCTATCT+CGG | + | chr1_1:59764432-59764451 | None:intergenic | 50.0% | |
| TCGGGACAGAGATAGGGAAA+AGG | - | chr1_1:59764441-59764460 | Msa0032590:CDS | 50.0% | |
| AAAGGGACAGAGATAGGGAG+AGG | - | chr1_1:59764464-59764483 | Msa0032590:CDS | 50.0% | |
| AAGGGACAGAGATAGGGAGA+GGG | - | chr1_1:59764465-59764484 | Msa0032590:CDS | 50.0% | |
| ACAGAGACCGATATCGTCTG+AGG | - | chr1_1:59764488-59764507 | Msa0032590:CDS | 50.0% | |
| CAGAGACCGATATCGTCTGA+GGG | - | chr1_1:59764489-59764508 | Msa0032590:CDS | 50.0% | |
| CAAGGAGTCGAAGTAGAAGC+AGG | - | chr1_1:59764599-59764618 | Msa0032590:intron | 50.0% | |
| AAGTAGAAGCAGGGATCGCA+AGG | - | chr1_1:59764609-59764628 | Msa0032590:intron | 50.0% | |
| AGGGATCGCAAGGAACATGA+TGG | - | chr1_1:59764619-59764638 | Msa0032590:CDS | 50.0% | |
| GATCGCAAGGAACATGATGG+TGG | - | chr1_1:59764622-59764641 | Msa0032590:CDS | 50.0% | |
| ! | TCGCAAGGAACATGATGGTG+GGG | - | chr1_1:59764624-59764643 | Msa0032590:CDS | 50.0% |
| TCCTAGAAGAGATGGAGCTG+AGG | - | chr1_1:59764681-59764700 | Msa0032590:CDS | 50.0% | |
| TCCTCAGCTCCATCTCTTCT+AGG | + | chr1_1:59764685-59764704 | None:intergenic | 50.0% | |
| AGAAGAGATGGAGCTGAGGA+TGG | - | chr1_1:59764685-59764704 | Msa0032590:CDS | 50.0% | |
| CTGCAATCTCTGGATCTGGA+TGG | + | chr1_1:59764771-59764790 | None:intergenic | 50.0% | |
| GCTTCTGCAATCTCTGGATC+TGG | + | chr1_1:59764775-59764794 | None:intergenic | 50.0% | |
| !! | GCTCCATGGCTTTGTCGACT+AGG | + | chr1_1:59761401-59761420 | None:intergenic | 55.0% |
| ACGAGGCACATGAAGGGAGT+GGG | + | chr1_1:59761462-59761481 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_1:59762283-59762302 | Msa0032590:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_1:59762284-59762303 | Msa0032590:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_1:59762290-59762309 | Msa0032590:intron | 55.0% | |
| GCCCTGCAAGGGAAAGAGAT+AGG | - | chr1_1:59762752-59762771 | Msa0032590:intron | 55.0% | |
| TCAGTGCAGAGAAACCTGGC+AGG | + | chr1_1:59763108-59763127 | None:intergenic | 55.0% | |
| ! | TATGACAGAGAGCGTGGACG+TGG | - | chr1_1:59764406-59764425 | Msa0032590:intron | 55.0% |
| GACGTGGCCGAGATAGAGAT+CGG | - | chr1_1:59764422-59764441 | Msa0032590:intron | 55.0% | |
| ACGTGGCCGAGATAGAGATC+GGG | - | chr1_1:59764423-59764442 | Msa0032590:intron | 55.0% | |
| ATGGTCGTGAGAGAGAAGGC+AGG | - | chr1_1:59764524-59764543 | Msa0032590:intron | 55.0% | |
| TGGTCGTGAGAGAGAAGGCA+GGG | - | chr1_1:59764525-59764544 | Msa0032590:intron | 55.0% | |
| AGAGACAGAGATCGTGACCG+TGG | - | chr1_1:59764559-59764578 | Msa0032590:intron | 55.0% | |
| ACAGAGATCGTGACCGTGGT+AGG | - | chr1_1:59764563-59764582 | Msa0032590:intron | 55.0% | |
| AGTAGCTCCTCCTCCTACCA+CGG | + | chr1_1:59764579-59764598 | None:intergenic | 55.0% | |
| GTAGGAGGAGGAGCTACTCA+AGG | - | chr1_1:59764581-59764600 | Msa0032590:intron | 55.0% | |
| TGTAGGTGCAGCGGTATGCT+TGG | - | chr1_1:59765001-59765020 | Msa0032590:CDS | 55.0% | |
| CCTCGAATGCTCTTCGCTGC+TGG | + | chr1_1:59761282-59761301 | None:intergenic | 60.0% | |
| !! | CCAGCAGCGAAGAGCATTCG+AGG | - | chr1_1:59761279-59761298 | Msa0032590:three_prime_UTR | 60.0% |
| GACGAGGCACATGAAGGGAG+TGG | + | chr1_1:59761463-59761482 | None:intergenic | 60.0% | |
| CTGCGGCGGAAATTACCGGA+TGG | - | chr1_1:59761742-59761761 | Msa0032590:CDS | 60.0% | |
| ACCTTCTCAGGCTCCTCAGC+AGG | + | chr1_1:59762625-59762644 | None:intergenic | 60.0% | |
| GAGATCGTGACCGTGGTAGG+AGG | - | chr1_1:59764566-59764585 | Msa0032590:intron | 60.0% | |
| ATCGTGACCGTGGTAGGAGG+AGG | - | chr1_1:59764569-59764588 | Msa0032590:intron | 60.0% | |
| GCCATGGAGCTCGACCACCT+CGG | - | chr1_1:59761411-59761430 | Msa0032590:three_prime_UTR | 65.0% | |
| ATGGAGCTCGACCACCTCGG+CGG | - | chr1_1:59761414-59761433 | Msa0032590:three_prime_UTR | 65.0% | |
| GACCACCTCGGCGGCACTTA+CGG | - | chr1_1:59761423-59761442 | Msa0032590:three_prime_UTR | 65.0% | |
| GCGGCACTTACGGTGGCAAC+CGG | - | chr1_1:59761433-59761452 | Msa0032590:three_prime_UTR | 65.0% | |
| GCCTGCTGAGGAGCCTGAGA+AGG | - | chr1_1:59762621-59762640 | Msa0032590:intron | 65.0% | |
| ATCGTGGGCGAAGCCCTGCA+AGG | - | chr1_1:59762740-59762759 | Msa0032590:intron | 65.0% | |
| TCGTGGGCGAAGCCCTGCAA+GGG | - | chr1_1:59762741-59762760 | Msa0032590:intron | 65.0% | |
| GCCGAGGTGGTCGAGCTCCA+TGG | + | chr1_1:59761415-59761434 | None:intergenic | 70.0% | |
| ! | CACCGTAAGTGCCGCCGAGG+TGG | + | chr1_1:59761428-59761447 | None:intergenic | 70.0% |
| CACCTCGGCGGCACTTACGG+TGG | - | chr1_1:59761426-59761445 | Msa0032590:three_prime_UTR | 70.0% | |
| ! | TGCCACCGTAAGTGCCGCCG+AGG | + | chr1_1:59761431-59761450 | None:intergenic | 70.0% |
| ! | GAGAAGGCAGGGAGCGCGAG+AGG | - | chr1_1:59764536-59764555 | Msa0032590:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 59761181 | 59765203 | 59761181 | ID=Msa0032590;Name=Msa0032590 |
| chr1_1 | mRNA | 59761181 | 59765203 | 59761181 | ID=Msa0032590-mRNA-1;Parent=Msa0032590;Name=Msa0032590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=80|1|1|1|1|1|6|363|385 |
| chr1_1 | exon | 59761181 | 59762012 | 59761181 | ID=Msa0032590-mRNA-1:exon:18526;Parent=Msa0032590-mRNA-1 |
| chr1_1 | exon | 59763581 | 59763651 | 59763581 | ID=Msa0032590-mRNA-1:exon:18525;Parent=Msa0032590-mRNA-1 |
| chr1_1 | exon | 59763742 | 59763856 | 59763742 | ID=Msa0032590-mRNA-1:exon:18524;Parent=Msa0032590-mRNA-1 |
| chr1_1 | exon | 59764424 | 59764514 | 59764424 | ID=Msa0032590-mRNA-1:exon:18523;Parent=Msa0032590-mRNA-1 |
| chr1_1 | exon | 59764618 | 59764739 | 59764618 | ID=Msa0032590-mRNA-1:exon:18522;Parent=Msa0032590-mRNA-1 |
| chr1_1 | exon | 59764834 | 59765203 | 59764834 | ID=Msa0032590-mRNA-1:exon:18521;Parent=Msa0032590-mRNA-1 |
| chr1_1 | five_prime_UTR | 59765124 | 59765203 | 59765124 | ID=Msa0032590-mRNA-1:five_prime_utr;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59764834 | 59765123 | 59764834 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59764618 | 59764739 | 59764618 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59764424 | 59764514 | 59764424 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59763742 | 59763856 | 59763742 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59763581 | 59763651 | 59763581 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | CDS | 59761544 | 59762012 | 59761544 | ID=Msa0032590-mRNA-1:cds;Parent=Msa0032590-mRNA-1 |
| chr1_1 | three_prime_UTR | 59761181 | 59761543 | 59761181 | ID=Msa0032590-mRNA-1:three_prime_utr;Parent=Msa0032590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
