Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0665860 | KEH28745.1 | 75.000 | 64 | 15 | 1 | 7 | 70 | 21 | 83 | 1.92e-21 | 92.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0665860 | A0A072US92 | 75.000 | 64 | 15 | 1 | 7 | 70 | 21 | 83 | 9.17e-22 | 92.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0665860 | 0.803632 | 3.177516e-49 | -8.615850e-47 |
| Msa0003890 | Msa0665860 | 0.807025 | 6.182392e-50 | -8.615850e-47 |
| Msa0006380 | Msa0665860 | 0.815781 | 7.753000e-52 | -8.615850e-47 |
| Msa0009430 | Msa0665860 | 0.800331 | 1.515294e-48 | -8.615850e-47 |
| Msa0020410 | Msa0665860 | 0.801426 | 9.057182e-49 | -8.615850e-47 |
| Msa0026710 | Msa0665860 | 0.830695 | 2.541275e-55 | -8.615850e-47 |
| Msa0033110 | Msa0665860 | 0.802526 | 5.380781e-49 | -8.615850e-47 |
| Msa0043980 | Msa0665860 | 0.845020 | 5.269330e-59 | -8.615850e-47 |
| Msa0044000 | Msa0665860 | 0.856246 | 3.662592e-62 | -8.615850e-47 |
| Msa0059110 | Msa0665860 | 0.808302 | 3.310277e-50 | -8.615850e-47 |
| Msa0072420 | Msa0665860 | 0.828323 | 9.581024e-55 | -8.615850e-47 |
| Msa0079070 | Msa0665860 | 0.827557 | 1.464744e-54 | -8.615850e-47 |
| Msa0083280 | Msa0665860 | 0.831728 | 1.415921e-55 | -8.615850e-47 |
| Msa0090360 | Msa0665860 | 0.848457 | 6.054329e-60 | -8.615850e-47 |
| Msa0090570 | Msa0665860 | 0.831465 | 1.643748e-55 | -8.615850e-47 |
| Msa0101500 | Msa0665860 | -0.815440 | 9.235987e-52 | -8.615850e-47 |
| Msa0104240 | Msa0665860 | 0.812684 | 3.746373e-51 | -8.615850e-47 |
| Msa0104800 | Msa0665860 | 0.800551 | 1.366965e-48 | -8.615850e-47 |
| Msa0115790 | Msa0665860 | 0.814487 | 1.502697e-51 | -8.615850e-47 |
| Msa0604290 | Msa0665860 | 0.809370 | 1.956746e-50 | -8.615850e-47 |
| Msa0607050 | Msa0665860 | 0.829661 | 4.543838e-55 | -8.615850e-47 |
| Msa0607910 | Msa0665860 | 0.802934 | 4.432335e-49 | -8.615850e-47 |
| Msa0609410 | Msa0665860 | -0.800618 | 1.324270e-48 | -8.615850e-47 |
| Msa0615710 | Msa0665860 | 0.820482 | 6.702729e-53 | -8.615850e-47 |
| Msa0623790 | Msa0665860 | 0.805900 | 1.067839e-49 | -8.615850e-47 |
| Msa0625720 | Msa0665860 | 0.816984 | 4.172522e-52 | -8.615850e-47 |
| Msa0643350 | Msa0665860 | 0.805823 | 1.108242e-49 | -8.615850e-47 |
| Msa0648080 | Msa0665860 | 0.803122 | 4.051840e-49 | -8.615850e-47 |
| Msa0649490 | Msa0665860 | 0.803537 | 3.324847e-49 | -8.615850e-47 |
| Msa0657580 | Msa0665860 | 0.811081 | 8.368232e-51 | -8.615850e-47 |
| Msa0663390 | Msa0665860 | 0.830493 | 2.847555e-55 | -8.615850e-47 |
| Msa0665860 | Msa0681250 | 0.805285 | 1.437221e-49 | -8.615850e-47 |
| Msa0665860 | Msa0681270 | 0.818828 | 1.599248e-52 | -8.615850e-47 |
| Msa0665860 | Msa0682680 | 0.823024 | 1.730688e-53 | -8.615850e-47 |
| Msa0665860 | Msa0690150 | 0.809217 | 2.110504e-50 | -8.615850e-47 |
| Msa0665860 | Msa0690860 | 0.824412 | 8.187516e-54 | -8.615850e-47 |
| Msa0665860 | Msa0692040 | -0.800300 | 1.537201e-48 | -8.615850e-47 |
| Msa0665860 | Msa0698540 | 0.839828 | 1.254152e-57 | -8.615850e-47 |
| Msa0665860 | Msa0707250 | 0.824369 | 8.378705e-54 | -8.615850e-47 |
| Msa0665860 | Msa0709400 | 0.848261 | 6.859684e-60 | -8.615850e-47 |
| Msa0665860 | Msa0737600 | 0.808009 | 3.823498e-50 | -8.615850e-47 |
| Msa0665860 | Msa0740510 | 0.810470 | 1.134333e-50 | -8.615850e-47 |
| Msa0665860 | Msa0740520 | 0.812730 | 3.660634e-51 | -8.615850e-47 |
| Msa0665860 | Msa0747060 | 0.817918 | 2.570639e-52 | -8.615850e-47 |
| Msa0665860 | Msa0750170 | 0.809101 | 2.234207e-50 | -8.615850e-47 |
| Msa0665860 | Msa0765080 | 0.825697 | 4.070023e-54 | -8.615850e-47 |
| Msa0665860 | Msa0794730 | 0.803145 | 4.008222e-49 | -8.615850e-47 |
| Msa0665860 | Msa0796700 | 0.807993 | 3.852208e-50 | -8.615850e-47 |
| Msa0665860 | Msa0806800 | 0.806431 | 8.254847e-50 | -8.615850e-47 |
| Msa0665860 | Msa0808080 | 0.805379 | 1.373145e-49 | -8.615850e-47 |
| Msa0665860 | Msa0820650 | 0.825489 | 4.559511e-54 | -8.615850e-47 |
| Msa0665860 | Msa0820770 | 0.810620 | 1.052727e-50 | -8.615850e-47 |
| Msa0665860 | Msa0832340 | 0.845392 | 4.178216e-59 | -8.615850e-47 |
| Msa0665860 | Msa0849030 | 0.809340 | 1.985580e-50 | -8.615850e-47 |
| Msa0665860 | Msa0861090 | 0.808549 | 2.932153e-50 | -8.615850e-47 |
| Msa0665860 | Msa0866550 | 0.804930 | 1.705380e-49 | -8.615850e-47 |
| Msa0665860 | Msa0880020 | 0.807621 | 4.621393e-50 | -8.615850e-47 |
| Msa0665860 | Msa0924470 | 0.820029 | 8.511951e-53 | -8.615850e-47 |
| Msa0665860 | Msa0963270 | 0.863949 | 1.727524e-64 | -8.615850e-47 |
| Msa0665860 | Msa0969810 | 0.824292 | 8.736534e-54 | -8.615850e-47 |
| Msa0665860 | Msa0974070 | 0.802956 | 4.386678e-49 | -8.615850e-47 |
| Msa0665860 | Msa1031660 | 0.828077 | 1.098210e-54 | -8.615850e-47 |
| Msa0665860 | Msa1034150 | 0.821783 | 3.359925e-53 | -8.615850e-47 |
| Msa0665860 | Msa1035480 | 0.809842 | 1.549511e-50 | -8.615850e-47 |
| Msa0665860 | Msa1070720 | 0.830703 | 2.529685e-55 | -8.615850e-47 |
| Msa0665860 | Msa1078170 | 0.817113 | 3.903123e-52 | -8.615850e-47 |
| Msa0665860 | Msa1081930 | 0.828880 | 7.028485e-55 | -8.615850e-47 |
| Msa0665860 | Msa1085800 | 0.808718 | 2.698731e-50 | -8.615850e-47 |
| Msa0665860 | Msa1100050 | 0.805256 | 1.457469e-49 | -8.615850e-47 |
| Msa0665860 | Msa1109680 | 0.830050 | 3.651953e-55 | -8.615850e-47 |
| Msa0665860 | Msa1117240 | 0.830270 | 3.228808e-55 | -8.615850e-47 |
| Msa0665860 | Msa1124960 | 0.835062 | 2.087640e-56 | -8.615850e-47 |
| Msa0665860 | Msa1147970 | 0.821955 | 3.066410e-53 | -8.615850e-47 |
| Msa0665860 | Msa1159840 | 0.801038 | 1.087320e-48 | -8.615850e-47 |
| Msa0665860 | Msa1160590 | 0.820078 | 8.292121e-53 | -8.615850e-47 |
| Msa0665860 | Msa1165940 | 0.812028 | 5.210666e-51 | -8.615850e-47 |
| Msa0665860 | Msa1167340 | 0.822449 | 2.355486e-53 | -8.615850e-47 |
| Msa0665860 | Msa1168580 | 0.807219 | 5.623960e-50 | -8.615850e-47 |
| Msa0665860 | Msa1174040 | 0.808485 | 3.026840e-50 | -8.615850e-47 |
| Msa0665860 | Msa1181250 | 0.817700 | 2.879069e-52 | -8.615850e-47 |
| Msa0665860 | Msa1181330 | 0.807166 | 5.770965e-50 | -8.615850e-47 |
| Msa0665860 | Msa1181910 | 0.825651 | 4.173621e-54 | -8.615850e-47 |
| Msa0665860 | Msa1184910 | 0.818203 | 2.215791e-52 | -8.615850e-47 |
| Msa0665860 | Msa1189070 | 0.828516 | 8.607957e-55 | -8.615850e-47 |
| Msa0665860 | Msa1204530 | 0.808639 | 2.805437e-50 | -8.615850e-47 |
| Msa0665860 | Msa1211230 | -0.803401 | 3.548727e-49 | -8.615850e-47 |
| Msa0665860 | Msa1225130 | 0.803425 | 3.508384e-49 | -8.615850e-47 |
| Msa0665860 | Msa1225620 | 0.801057 | 1.077681e-48 | -8.615850e-47 |
| Msa0665860 | Msa1244600 | 0.850871 | 1.283286e-60 | -8.615850e-47 |
| Msa0665860 | Msa1250530 | 0.808395 | 3.163955e-50 | -8.615850e-47 |
| Msa0665860 | Msa1253020 | 0.824279 | 8.795671e-54 | -8.615850e-47 |
| Msa0665860 | Msa1254730 | 0.835506 | 1.612739e-56 | -8.615850e-47 |
| Msa0665860 | Msa1271130 | 0.801135 | 1.038725e-48 | -8.615850e-47 |
| Msa0665860 | Msa1279400 | 0.810133 | 1.341027e-50 | -8.615850e-47 |
| Msa0665860 | Msa1284550 | 0.820808 | 5.641023e-53 | -8.615850e-47 |
| Msa0665860 | Msa1286800 | 0.809813 | 1.571633e-50 | -8.615850e-47 |
| Msa0665860 | Msa1294820 | 0.813927 | 1.997958e-51 | -8.615850e-47 |
| Msa0665860 | Msa1299950 | 0.807674 | 4.503218e-50 | -8.615850e-47 |
| Msa0665860 | Msa1305660 | 0.857866 | 1.218761e-62 | -8.615850e-47 |
| Msa0665860 | Msa1305810 | 0.824499 | 7.810442e-54 | -8.615850e-47 |
| Msa0665860 | Msa1331000 | 0.818599 | 1.801916e-52 | -8.615850e-47 |
| Msa0665860 | Msa1341060 | 0.817005 | 4.126510e-52 | -8.615850e-47 |
| Msa0665860 | Msa1346840 | 0.802639 | 5.098431e-49 | -8.615850e-47 |
| Msa0665860 | Msa1353980 | 0.813668 | 2.277666e-51 | -8.615850e-47 |
| Msa0665860 | Msa1364730 | 0.803789 | 2.948564e-49 | -8.615850e-47 |
| Msa0665860 | Msa1370070 | -0.813957 | 1.967254e-51 | -8.615850e-47 |
| Msa0665860 | Msa1377500 | 0.805985 | 1.024899e-49 | -8.615850e-47 |
| Msa0665860 | Msa1393570 | 0.803244 | 3.824659e-49 | -8.615850e-47 |
| Msa0665860 | Msa1412530 | 0.805566 | 1.254686e-49 | -8.615850e-47 |
| Msa0665860 | Msa1419870 | 0.805323 | 1.410967e-49 | -8.615850e-47 |
| Msa0665860 | Msa1432420 | 0.815447 | 9.202012e-52 | -8.615850e-47 |
| Msa0665860 | Msa1433390 | 0.844803 | 6.029604e-59 | -8.615850e-47 |
| Msa0665860 | Msa1434420 | -0.855342 | 6.729302e-62 | -8.615850e-47 |
| Msa0665860 | Msa1451160 | 0.831801 | 1.358278e-55 | -8.615850e-47 |
| Msa0665860 | Msa1451550 | 0.804061 | 2.588078e-49 | -8.615850e-47 |
| Msa0665860 | Msa1451560 | 0.809291 | 2.035097e-50 | -8.615850e-47 |
| Msa0665860 | Msa1452240 | 0.823100 | 1.661251e-53 | -8.615850e-47 |
| Msa0665860 | Msa1462290 | 0.810821 | 9.525440e-51 | -8.615850e-47 |
| Msa0665860 | Msa1466540 | 0.821223 | 4.524952e-53 | -8.615850e-47 |
| Msa0123560 | Msa0665860 | 0.819504 | 1.122109e-52 | -8.615850e-47 |
| Msa0127650 | Msa0665860 | 0.835414 | 1.701482e-56 | -8.615850e-47 |
| Msa0127800 | Msa0665860 | 0.856910 | 2.337363e-62 | -8.615850e-47 |
| Msa0137840 | Msa0665860 | 0.826208 | 3.077916e-54 | -8.615850e-47 |
| Msa0140820 | Msa0665860 | 0.801708 | 7.925121e-49 | -8.615850e-47 |
| Msa0148080 | Msa0665860 | 0.825756 | 3.940358e-54 | -8.615850e-47 |
| Msa0151180 | Msa0665860 | 0.803998 | 2.667002e-49 | -8.615850e-47 |
| Msa0184040 | Msa0665860 | 0.843637 | 1.239867e-58 | -8.615850e-47 |
| Msa0194950 | Msa0665860 | -0.819114 | 1.376199e-52 | -8.615850e-47 |
| Msa0195980 | Msa0665860 | 0.810772 | 9.760023e-51 | -8.615850e-47 |
| Msa0204960 | Msa0665860 | 0.834835 | 2.382385e-56 | -8.615850e-47 |
| Msa0205130 | Msa0665860 | 0.801928 | 7.141892e-49 | -8.615850e-47 |
| Msa0209350 | Msa0665860 | 0.814025 | 1.900987e-51 | -8.615850e-47 |
| Msa0211150 | Msa0665860 | 0.826756 | 2.277442e-54 | -8.615850e-47 |
| Msa0217680 | Msa0665860 | 0.800425 | 1.450220e-48 | -8.615850e-47 |
| Msa0219590 | Msa0665860 | 0.827868 | 1.233302e-54 | -8.615850e-47 |
| Msa0231980 | Msa0665860 | 0.829142 | 6.073447e-55 | -8.615850e-47 |
| Msa0232050 | Msa0665860 | 0.831134 | 1.982394e-55 | -8.615850e-47 |
| Msa0376300 | Msa0665860 | 0.802059 | 6.713076e-49 | -8.615850e-47 |
| Msa0376310 | Msa0665860 | 0.825120 | 5.572398e-54 | -8.615850e-47 |
| Msa0383800 | Msa0665860 | 0.807076 | 6.031329e-50 | -8.615850e-47 |
| Msa0387820 | Msa0665860 | 0.831323 | 1.781356e-55 | -8.615850e-47 |
| Msa0388700 | Msa0665860 | 0.808490 | 3.018590e-50 | -8.615850e-47 |
| Msa0395820 | Msa0665860 | 0.801976 | 6.983463e-49 | -8.615850e-47 |
| Msa0398670 | Msa0665860 | 0.845191 | 4.737836e-59 | -8.615850e-47 |
| Msa0453350 | Msa0665860 | 0.817831 | 2.688753e-52 | -8.615850e-47 |
| Msa0454360 | Msa0665860 | 0.840692 | 7.461911e-58 | -8.615850e-47 |
| Msa0467380 | Msa0665860 | 0.810257 | 1.261178e-50 | -8.615850e-47 |
| Msa0469990 | Msa0665860 | 0.814732 | 1.326072e-51 | -8.615850e-47 |
| Msa0473190 | Msa0665860 | 0.801144 | 1.034413e-48 | -8.615850e-47 |
| Msa0477080 | Msa0665860 | 0.807139 | 5.848798e-50 | -8.615850e-47 |
| Msa0481530 | Msa0665860 | 0.829591 | 4.725235e-55 | -8.615850e-47 |
| Msa0240920 | Msa0665860 | 0.808055 | 3.737487e-50 | -8.615850e-47 |
| Msa0243090 | Msa0665860 | 0.843819 | 1.108176e-58 | -8.615850e-47 |
| Msa0257490 | Msa0665860 | 0.806554 | 7.776232e-50 | -8.615850e-47 |
| Msa0270320 | Msa0665860 | 0.801718 | 7.889332e-49 | -8.615850e-47 |
| Msa0272300 | Msa0665860 | 0.814008 | 1.917498e-51 | -8.615850e-47 |
| Msa0280090 | Msa0665860 | 0.817921 | 2.566189e-52 | -8.615850e-47 |
| Msa0281530 | Msa0665860 | 0.825801 | 3.845135e-54 | -8.615850e-47 |
| Msa0287410 | Msa0665860 | 0.815645 | 8.312441e-52 | -8.615850e-47 |
| Msa0305410 | Msa0665860 | 0.819666 | 1.030159e-52 | -8.615850e-47 |
| Msa0315440 | Msa0665860 | -0.808605 | 2.852818e-50 | -8.615850e-47 |
| Msa0318980 | Msa0665860 | 0.800531 | 1.379735e-48 | -8.615850e-47 |
| Msa0326480 | Msa0665860 | 0.821604 | 3.697332e-53 | -8.615850e-47 |
| Msa0334550 | Msa0665860 | 0.813286 | 2.764710e-51 | -8.615850e-47 |
| Msa0363790 | Msa0665860 | 0.809686 | 1.673747e-50 | -8.615850e-47 |
| Msa0493480 | Msa0665860 | 0.806111 | 9.639745e-50 | -8.615850e-47 |
| Msa0509710 | Msa0665860 | 0.806674 | 7.335386e-50 | -8.615850e-47 |
| Msa0512340 | Msa0665860 | 0.827715 | 1.342000e-54 | -8.615850e-47 |
| Msa0527540 | Msa0665860 | 0.834577 | 2.766235e-56 | -8.615850e-47 |
| Msa0529890 | Msa0665860 | 0.818930 | 1.516012e-52 | -8.615850e-47 |
| Msa0530560 | Msa0665860 | 0.844703 | 6.414211e-59 | -8.615850e-47 |
| Msa0531020 | Msa0665860 | 0.896203 | 4.622653e-76 | -8.615850e-47 |
| Msa0531530 | Msa0665860 | 0.829162 | 6.007808e-55 | -8.615850e-47 |
| Msa0542260 | Msa0665860 | 0.812717 | 3.684246e-51 | -8.615850e-47 |
| Msa0542290 | Msa0665860 | 0.826732 | 2.308617e-54 | -8.615850e-47 |
| Msa0547160 | Msa0665860 | 0.822822 | 1.927951e-53 | -8.615850e-47 |
| Msa0548240 | Msa0665860 | 0.855776 | 5.026391e-62 | -8.615850e-47 |
| Msa0556060 | Msa0665860 | 0.836016 | 1.197602e-56 | -8.615850e-47 |
| Msa0572840 | Msa0665860 | 0.802424 | 5.647054e-49 | -8.615850e-47 |
| Msa0578860 | Msa0665860 | 0.830470 | 2.883674e-55 | -8.615850e-47 |
| Msa0585560 | Msa0665860 | 0.820642 | 6.158485e-53 | -8.615850e-47 |
| Msa0587910 | Msa0665860 | 0.855931 | 4.530523e-62 | -8.615850e-47 |
| Msa0588260 | Msa0665860 | 0.803624 | 3.189024e-49 | -8.615850e-47 |
| Msa0590990 | Msa0665860 | 0.815806 | 7.654559e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0665860 | MtrunA17_Chr3g0089751 | 52.000 | 50 | 22 | 1 | 23 | 70 | 1 | 50 | 2.42e-11 | 55.1 |
| Msa0665860 | MtrunA17_Chr4g0004031 | 78.125 | 32 | 7 | 0 | 78 | 109 | 1 | 32 | 6.08e-11 | 53.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 560 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGCTGGTTGCTTTAC+AGG | 0.100793 | 4_4:+5737062 | Msa0665860:CDS |
| TGCTTTACAGGTGGTTTATC+TGG | 0.203272 | 4_4:+5744181 | Msa0665860:intron |
| AATTTACAGTCTTGAATAAT+AGG | 0.257127 | 4_4:-5744420 | None:intergenic |
| AGACATAATGATTCATTTGT+TGG | 0.316655 | 4_4:-5737016 | None:intergenic |
| GTTGGTCAGAGAGCTGTTCT+AGG | 0.326408 | 4_4:-5736998 | None:intergenic |
| GTCTTGAATAATAGGATAAA+TGG | 0.360725 | 4_4:-5744412 | None:intergenic |
| TACAGGTGGTTTATCTGGAT+GGG | 0.395118 | 4_4:+5744186 | Msa0665860:intron |
| TGTGGTTAATTGTATTAATA+CGG | 0.397135 | 4_4:+5744374 | Msa0665860:three_prime_UTR |
| GCGGAAGCACTTGGGTTAGA+TGG | 0.414835 | 4_4:+5744289 | Msa0665860:CDS |
| TTACAGGTGGTTTATCTGGA+TGG | 0.416352 | 4_4:+5744185 | Msa0665860:intron |
| ATGGTTGTTTATAACCAATC+TGG | 0.418762 | 4_4:+5744211 | Msa0665860:CDS |
| CCAGTGTTGGCGGAAGCACT+TGG | 0.433243 | 4_4:+5744280 | Msa0665860:CDS |
| TCAGTGTTGGCGGAAGCACT+TGG | 0.439691 | 4_4:+5737173 | Msa0665860:CDS |
| CAGTGTTGGCGGAAGCACTT+GGG | 0.460580 | 4_4:+5737174 | Msa0665860:CDS |
| ACAGGTGGTTTATCTGGATG+GGG | 0.467915 | 4_4:+5744187 | Msa0665860:intron |
| TCGATGGATTTGAGAATGTA+TGG | 0.482915 | 4_4:+5735151 | None:intergenic |
| CAACACTGGATCAATTTCAA+TGG | 0.485295 | 4_4:-5744266 | None:intergenic |
| AAAATTGCACCACACCAGAT+TGG | 0.488889 | 4_4:-5737118 | None:intergenic |
| AAAATTGCACCACACCAGAT+TGG | 0.488889 | 4_4:-5744225 | None:intergenic |
| TACAGGTGGTATAGCTGCAT+GGG | 0.491767 | 4_4:+5737079 | Msa0665860:CDS |
| TGAAATTGATTCAGTGTTGG+CGG | 0.517755 | 4_4:+5737163 | Msa0665860:CDS |
| CCAAGTGCTTCCGCCAACAC+TGG | 0.527594 | 4_4:-5744280 | None:intergenic |
| TGGTATAGCTGCATGGGGAA+TGG | 0.533758 | 4_4:+5737085 | Msa0665860:CDS |
| AAGCAATAGCAATACTCTAC+AGG | 0.534860 | 4_4:-5744338 | None:intergenic |
| CAACACTGAATCAATTTCAA+TGG | 0.536676 | 4_4:-5737159 | None:intergenic |
| ATTAACCACAGTTTCAGCAT+TGG | 0.542170 | 4_4:-5744361 | None:intergenic |
| CATTGAAATTGATTCAGTGT+TGG | 0.546286 | 4_4:+5737160 | Msa0665860:CDS |
| ATGGTTGCTTGTAACCAATC+TGG | 0.557556 | 4_4:+5737104 | Msa0665860:CDS |
| TGAAATTGATCCAGTGTTGG+CGG | 0.576530 | 4_4:+5744270 | Msa0665860:CDS |
| CAGGTGGTTTATCTGGATGG+GGG | 0.578004 | 4_4:+5744188 | Msa0665860:intron |
| CATTGAAATTGATCCAGTGT+TGG | 0.578009 | 4_4:+5744267 | Msa0665860:CDS |
| TTACAGGTGGTATAGCTGCA+TGG | 0.578550 | 4_4:+5737078 | Msa0665860:CDS |
| TGCTTCCAATGCTGAAACTG+TGG | 0.590669 | 4_4:+5744356 | Msa0665860:three_prime_UTR |
| CAGTGTTGGCGGAAGCACTT+GGG | 0.592959 | 4_4:+5744281 | Msa0665860:CDS |
| GATGCTGGTTGCTTTACAGG+TGG | 0.621302 | 4_4:+5737065 | Msa0665860:CDS |
| TGTTTATAACCAATCTGGTG+TGG | 0.624829 | 4_4:+5744216 | Msa0665860:CDS |
| AGTGTTGGCGGAAGCACTTG+GGG | 0.630922 | 4_4:+5737175 | Msa0665860:CDS |
| TGCTTGTAACCAATCTGGTG+TGG | 0.643202 | 4_4:+5737109 | Msa0665860:CDS |
| ACAGGTGGTATAGCTGCATG+GGG | 0.693519 | 4_4:+5737080 | Msa0665860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAATAAAATAAAAAA+TGG | - | chr4_4:5739234-5739253 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr4_4:5741468-5741487 | Msa0665860:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr4_4:5741469-5741488 | Msa0665860:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr4_4:5741468-5741487 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr4_4:5741469-5741488 | None:intergenic | 0.0% |
| !! | ATATATATATATTTATATAT+AGG | + | chr4_4:5742376-5742395 | Msa0665860:intron | 0.0% |
| !! | TATATATATATTTATATATA+GGG | + | chr4_4:5742377-5742396 | Msa0665860:intron | 0.0% |
| !! | TATATATATATATATTATAT+GGG | - | chr4_4:5742691-5742710 | None:intergenic | 0.0% |
| !! | ATATATATATATATATTATA+TGG | - | chr4_4:5742692-5742711 | None:intergenic | 0.0% |
| !!! | TTTATAAATCAATTTTCTTT+GGG | + | chr4_4:5742010-5742029 | Msa0665860:intron | 10.0% |
| !!! | AATATGTTATTTTATGTTTT+TGG | + | chr4_4:5742785-5742804 | Msa0665860:intron | 10.0% |
| !! | ATAAACATTATCATTAGAAA+CGG | - | chr4_4:5735215-5735234 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTTTCATCATAA+AGG | + | chr4_4:5736008-5736027 | Msa0665860:intron | 15.0% |
| !!! | TGTATTTTTTTCATCATAAA+GGG | + | chr4_4:5736009-5736028 | Msa0665860:intron | 15.0% |
| !! | AATATGATATAAAAGAGAAT+GGG | - | chr4_4:5736147-5736166 | None:intergenic | 15.0% |
| !! | GATATTATGCATAATTATAT+GGG | - | chr4_4:5736424-5736443 | None:intergenic | 15.0% |
| !! | TTCTTATTCATTAAAAAAAC+TGG | + | chr4_4:5736944-5736963 | Msa0665860:intron | 15.0% |
| !! | TCTTATTCATTAAAAAAACT+GGG | + | chr4_4:5736945-5736964 | Msa0665860:intron | 15.0% |
| !! | TTATGAAATATGATGTTTAT+AGG | + | chr4_4:5736975-5736994 | Msa0665860:intron | 15.0% |
| !! | AAAATAAAAATCATATGACA+GGG | - | chr4_4:5737425-5737444 | None:intergenic | 15.0% |
| !! | AAAAATAAAAATCATATGAC+AGG | - | chr4_4:5737426-5737445 | None:intergenic | 15.0% |
| !!! | TTAATTTTTGTTTATCCAAT+TGG | + | chr4_4:5737687-5737706 | Msa0665860:intron | 15.0% |
| !! | AGATATGATTAATGAATTAT+AGG | + | chr4_4:5738439-5738458 | Msa0665860:intron | 15.0% |
| !!! | TTTATGAGACTTTTATAATA+AGG | + | chr4_4:5738717-5738736 | Msa0665860:intron | 15.0% |
| !!! | TACATAAGAAATTTTCTTTT+TGG | + | chr4_4:5738898-5738917 | Msa0665860:intron | 15.0% |
| !!! | ACATAAGAAATTTTCTTTTT+GGG | + | chr4_4:5738899-5738918 | Msa0665860:intron | 15.0% |
| !! | AAATATATAGAATACATGTA+TGG | - | chr4_4:5739194-5739213 | None:intergenic | 15.0% |
| !!! | TATATTTTGGTTATTCAATA+AGG | - | chr4_4:5739891-5739910 | None:intergenic | 15.0% |
| !!! | CTAAATTTCTTTGTATATTT+TGG | - | chr4_4:5739904-5739923 | None:intergenic | 15.0% |
| !! | CAAAATATACAAAGAAATTT+AGG | + | chr4_4:5739902-5739921 | Msa0665860:intron | 15.0% |
| !! | TAATAATAGTTGTCAAAAAA+TGG | + | chr4_4:5739992-5740011 | Msa0665860:intron | 15.0% |
| !! | ATAAACATTATCATTTGAAA+CGG | - | chr4_4:5740862-5740881 | None:intergenic | 15.0% |
| !! | ATGAATTATAAATTTGAACT+TGG | + | chr4_4:5741113-5741132 | Msa0665860:intron | 15.0% |
| !! | ATCAAAATATAAATTCAAAC+AGG | - | chr4_4:5741357-5741376 | None:intergenic | 15.0% |
| !! | ATATATATATATATAGGGAT+AGG | + | chr4_4:5741512-5741531 | Msa0665860:intron | 15.0% |
| !!! | TAATTTATTCTTTCTTTTCT+TGG | + | chr4_4:5741670-5741689 | Msa0665860:intron | 15.0% |
| !! | ATGCAAAATATAACAAAAAT+GGG | - | chr4_4:5741706-5741725 | None:intergenic | 15.0% |
| !!! | CTTTATAAATCAATTTTCTT+TGG | + | chr4_4:5742009-5742028 | Msa0665860:intron | 15.0% |
| !! | TATATATATATATATGGGAT+AGG | - | chr4_4:5742333-5742352 | None:intergenic | 15.0% |
| !! | ACATCATGTTAAAAAAAAAA+AGG | - | chr4_4:5743898-5743917 | None:intergenic | 15.0% |
| !!! | TTCTATTTCATTAGTTTTTT+TGG | + | chr4_4:5744015-5744034 | Msa0665860:intron | 15.0% |
| !!! | TCTATTTCATTAGTTTTTTT+GGG | + | chr4_4:5744016-5744035 | Msa0665860:intron | 15.0% |
| !! | TTATACAATATGATGTTAAT+AGG | + | chr4_4:5744083-5744102 | Msa0665860:intron | 15.0% |
| !!! | TTGTTTTTATCATGATTATG+AGG | + | chr4_4:5735354-5735373 | Msa0665860:intron | 20.0% |
| !!! | CATTTTCCATATAACAAAAT+CGG | - | chr4_4:5735383-5735402 | None:intergenic | 20.0% |
| !! | AAATTTAGCTATCAGAATAT+TGG | + | chr4_4:5735442-5735461 | Msa0665860:intron | 20.0% |
| !! | ATTGGAATGAATTATAACTT+TGG | + | chr4_4:5735460-5735479 | Msa0665860:intron | 20.0% |
| !! | GAATATGATATAAAAGAGAA+TGG | - | chr4_4:5736148-5736167 | None:intergenic | 20.0% |
| !! | TCAAGCACTTATATTATATT+AGG | + | chr4_4:5736241-5736260 | Msa0665860:intron | 20.0% |
| !! | TAAACTGTCTAAATCAATTA+TGG | - | chr4_4:5736312-5736331 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTAGACAGTTT+AGG | + | chr4_4:5736311-5736330 | Msa0665860:intron | 20.0% |
| !!! | TAATTGATTTAGACAGTTTA+GGG | + | chr4_4:5736312-5736331 | Msa0665860:intron | 20.0% |
| !! | TATTATTACTATCTTACTGA+AGG | + | chr4_4:5736347-5736366 | Msa0665860:intron | 20.0% |
| !! | GGATATTATGCATAATTATA+TGG | - | chr4_4:5736425-5736444 | None:intergenic | 20.0% |
| !!! | AATATCCCATTTTCTATATT+TGG | + | chr4_4:5736438-5736457 | Msa0665860:intron | 20.0% |
| !! | AGATACTATACTATTCAAAT+TGG | + | chr4_4:5736488-5736507 | Msa0665860:intron | 20.0% |
| !! | AGTTTATGAGAATGAAAATT+TGG | + | chr4_4:5736512-5736531 | Msa0665860:intron | 20.0% |
| !! | AATTTACAATCATGAATACA+AGG | - | chr4_4:5737302-5737321 | None:intergenic | 20.0% |
| !!! | TGATTATGATTTGTTTATGA+TGG | + | chr4_4:5738051-5738070 | Msa0665860:intron | 20.0% |
| !! | TGATATATAATGTTATGAGA+TGG | + | chr4_4:5738225-5738244 | Msa0665860:intron | 20.0% |
| !! | ATTAAGATGCTATGATTAAA+AGG | + | chr4_4:5738292-5738311 | Msa0665860:intron | 20.0% |
| !! | AAGAATAATGATACTAGTTA+AGG | + | chr4_4:5738402-5738421 | Msa0665860:intron | 20.0% |
| !! | CTTCATAAAATAATATGCAA+AGG | - | chr4_4:5738672-5738691 | None:intergenic | 20.0% |
| !! | ATTAGTTCATTCAACATAAA+AGG | - | chr4_4:5738758-5738777 | None:intergenic | 20.0% |
| !!! | CTTATGTTTAATGATTTTGA+AGG | + | chr4_4:5738800-5738819 | Msa0665860:intron | 20.0% |
| !!! | AAATTTTCTTTTTGGGAAAA+CGG | + | chr4_4:5738906-5738925 | Msa0665860:intron | 20.0% |
| !!! | ATATTTAATTTAGTAGAGGA+AGG | - | chr4_4:5739299-5739318 | None:intergenic | 20.0% |
| !!! | TGCAATATTTAATTTAGTAG+AGG | - | chr4_4:5739303-5739322 | None:intergenic | 20.0% |
| !! | TTTAGATAAAGGTTTGAATA+TGG | - | chr4_4:5739824-5739843 | None:intergenic | 20.0% |
| !! | CAAAGAGAAAGTTAAAATAA+AGG | + | chr4_4:5739948-5739967 | Msa0665860:intron | 20.0% |
| !!! | TTTCAAGTAAATGATTAACA+GGG | - | chr4_4:5740395-5740414 | None:intergenic | 20.0% |
| !!! | TTTTCAAGTAAATGATTAAC+AGG | - | chr4_4:5740396-5740415 | None:intergenic | 20.0% |
| !! | AATATTTATCGTCATTTAAC+TGG | - | chr4_4:5740452-5740471 | None:intergenic | 20.0% |
| !! | TAATTCAACTAACACTTATA+AGG | + | chr4_4:5740659-5740678 | Msa0665860:intron | 20.0% |
| !!! | TATTCAAAATTTACCTTTTG+CGG | + | chr4_4:5740755-5740774 | Msa0665860:intron | 20.0% |
| !!! | ATTTTAATTCTACTGTCAAT+TGG | + | chr4_4:5740829-5740848 | Msa0665860:intron | 20.0% |
| !!! | TTTTAATTCTACTGTCAATT+GGG | + | chr4_4:5740830-5740849 | Msa0665860:intron | 20.0% |
| !!! | CATTTTCCATATAACAAAAT+CGG | - | chr4_4:5735383-5735402 | None:intergenic | 20.0% |
| !!! | TATATTTTGATCATTGTACT+TGG | + | chr4_4:5741366-5741385 | Msa0665860:intron | 20.0% |
| !! | TTAGATTAATGTTGGATTAA+TGG | - | chr4_4:5741585-5741604 | None:intergenic | 20.0% |
| !! | GATGCAAAATATAACAAAAA+TGG | - | chr4_4:5741707-5741726 | None:intergenic | 20.0% |
| !!! | AGAATCTCTAAAAAATAGTA+GGG | - | chr4_4:5741759-5741778 | None:intergenic | 20.0% |
| !!! | TAGAATCTCTAAAAAATAGT+AGG | - | chr4_4:5741760-5741779 | None:intergenic | 20.0% |
| !!! | TTCTAATTACTCATTTTTGT+TGG | + | chr4_4:5741775-5741794 | Msa0665860:intron | 20.0% |
| !!! | TCTTTGTTTCATGTTTATAT+TGG | + | chr4_4:5741802-5741821 | Msa0665860:intron | 20.0% |
| !!! | GCATATGTTCTTTTTAATTT+TGG | + | chr4_4:5741955-5741974 | Msa0665860:intron | 20.0% |
| !! | TTAAAGTTTGATTAATGGTT+AGG | + | chr4_4:5742265-5742284 | Msa0665860:intron | 20.0% |
| !!! | TCAAATTTAATTTAACACCT+TGG | + | chr4_4:5742296-5742315 | Msa0665860:intron | 20.0% |
| !! | ACTGTATAATTGAATGTAAA+TGG | + | chr4_4:5742983-5743002 | Msa0665860:intron | 20.0% |
| !! | TAATATTACTATCTTAGTGA+AGG | + | chr4_4:5743426-5743445 | Msa0665860:intron | 20.0% |
| !! | AGTTTATGAGAATGAATATT+TGG | + | chr4_4:5743588-5743607 | Msa0665860:intron | 20.0% |
| !! | CTAATTTATTTCATGTTATG+AGG | + | chr4_4:5743626-5743645 | Msa0665860:intron | 20.0% |
| !! | GAACAAAATGATTTATTTGT+TGG | - | chr4_4:5744129-5744148 | None:intergenic | 20.0% |
| !! | TGTGGTTAATTGTATTAATA+CGG | + | chr4_4:5744374-5744393 | Msa0665860:three_prime_UTR | 20.0% |
| !! | AATTTACAGTCTTGAATAAT+AGG | - | chr4_4:5744423-5744442 | None:intergenic | 20.0% |
| !!! | CGATTTTGTTATATGGAAAA+TGG | + | chr4_4:5735381-5735400 | Msa0665860:intron | 25.0% |
| ! | ATATGGAAAATGGAAGAATT+TGG | + | chr4_4:5735391-5735410 | Msa0665860:intron | 25.0% |
| ! | AATTTGGAAATGAAAAGTCT+TGG | + | chr4_4:5735407-5735426 | Msa0665860:intron | 25.0% |
| !! | AAATATTGTTAGAGTTGGTT+GGG | - | chr4_4:5736101-5736120 | None:intergenic | 25.0% |
| ! | TTGAGAAATATTGTTAGAGT+TGG | - | chr4_4:5736106-5736125 | None:intergenic | 25.0% |
| !! | TTTTATATCATATTCCCTCT+AGG | + | chr4_4:5736153-5736172 | Msa0665860:intron | 25.0% |
| ! | TACTAGTTAAATAAGCTTCA+CGG | + | chr4_4:5736376-5736395 | Msa0665860:intron | 25.0% |
| ! | TGCATAATTATATGGGTTTA+AGG | - | chr4_4:5736417-5736436 | None:intergenic | 25.0% |
| ! | CAATGAGATTGATGAAATTA+TGG | + | chr4_4:5736601-5736620 | Msa0665860:intron | 25.0% |
| ! | TTAAGCATATATAGCTAGAA+TGG | + | chr4_4:5736790-5736809 | Msa0665860:intron | 25.0% |
| ! | AATTCTTGCACAATAAAAGT+TGG | - | chr4_4:5736869-5736888 | None:intergenic | 25.0% |
| !! | CTTTTATTGTGCAAGAATTT+AGG | + | chr4_4:5736870-5736889 | Msa0665860:intron | 25.0% |
| ! | AGACATAATGATTCATTTGT+TGG | - | chr4_4:5737019-5737038 | None:intergenic | 25.0% |
| ! | AAATTACTTAAGACTCATGT+TGG | + | chr4_4:5737317-5737336 | Msa0665860:intron | 25.0% |
| ! | TGTTGAATGAGAAGTTTATT+TGG | + | chr4_4:5737358-5737377 | Msa0665860:intron | 25.0% |
| !! | TTAAGCTAATGGATAAGATT+TGG | - | chr4_4:5737552-5737571 | None:intergenic | 25.0% |
| ! | AATAGATTTACACTGAGATA+TGG | - | chr4_4:5737630-5737649 | None:intergenic | 25.0% |
| !!! | ATCCAATTGGTCTTTTTTAT+TGG | + | chr4_4:5737700-5737719 | Msa0665860:intron | 25.0% |
| !!! | TCCAATTGGTCTTTTTTATT+GGG | + | chr4_4:5737701-5737720 | Msa0665860:intron | 25.0% |
| ! | ATTGCTTGTGATTATGTTTA+TGG | + | chr4_4:5738201-5738220 | Msa0665860:intron | 25.0% |
| ! | ATGAAGTATATGACTAATGT+AGG | + | chr4_4:5738379-5738398 | Msa0665860:intron | 25.0% |
| ! | TAGAGTTCAACAACTTTAAA+CGG | - | chr4_4:5738874-5738893 | None:intergenic | 25.0% |
| !!! | AATTTTCTTTTTGGGAAAAC+GGG | + | chr4_4:5738907-5738926 | Msa0665860:intron | 25.0% |
| ! | TAATTTCCTTCAAAGTTCAA+TGG | - | chr4_4:5739772-5739791 | None:intergenic | 25.0% |
| ! | GGAAATTAAAAACTTACACT+TGG | + | chr4_4:5739784-5739803 | Msa0665860:intron | 25.0% |
| ! | ATTCAAACCTTTATCTAAAG+AGG | + | chr4_4:5739825-5739844 | Msa0665860:intron | 25.0% |
| !!! | TAACTTTCTCTTTGTTGTTT+TGG | - | chr4_4:5739942-5739961 | None:intergenic | 25.0% |
| ! | ATCTTAATTAGAGATTTGAC+TGG | - | chr4_4:5740219-5740238 | None:intergenic | 25.0% |
| !!! | AGATGAATTTTGATGAATGA+AGG | - | chr4_4:5740282-5740301 | None:intergenic | 25.0% |
| ! | AAATAGTAAAGATAAGAGCA+TGG | - | chr4_4:5740330-5740349 | None:intergenic | 25.0% |
| ! | ATGAGATTAAAACAGTTATG+TGG | + | chr4_4:5740532-5740551 | Msa0665860:intron | 25.0% |
| ! | AGGACAATATCTGATAAATT+AGG | + | chr4_4:5740579-5740598 | Msa0665860:intron | 25.0% |
| ! | GGACAATATCTGATAAATTA+GGG | + | chr4_4:5740580-5740599 | Msa0665860:intron | 25.0% |
| ! | TATTCTTGAATCCATAGAAA+CGG | - | chr4_4:5740796-5740815 | None:intergenic | 25.0% |
| ! | TCTATGGATTCAAGAATATA+TGG | + | chr4_4:5740798-5740817 | Msa0665860:intron | 25.0% |
| !!! | TTGTTTTTATCATGATTACG+AGG | + | chr4_4:5741001-5741020 | Msa0665860:intron | 25.0% |
| !!! | TGTTTTTATCATGATTACGA+GGG | + | chr4_4:5741002-5741021 | Msa0665860:intron | 25.0% |
| !!! | CGATTTTGTTATATGGAAAA+TGG | + | chr4_4:5735381-5735400 | Msa0665860:intron | 25.0% |
| ! | ATATGGAAAATGGAAGAATT+TGG | + | chr4_4:5735391-5735410 | Msa0665860:intron | 25.0% |
| ! | AATTTGGAAATGAAAAGTCT+TGG | + | chr4_4:5735407-5735426 | Msa0665860:intron | 25.0% |
| !!! | TCAAATTTAATTTGACACCT+TGG | - | chr4_4:5741549-5741568 | None:intergenic | 25.0% |
| ! | TTAATGTTGGATTAATGGTT+AGG | - | chr4_4:5741580-5741599 | None:intergenic | 25.0% |
| ! | TAAGATAATGAATGAACGAT+TGG | - | chr4_4:5741983-5742002 | None:intergenic | 25.0% |
| ! | AATCGTTCATTCATTATCTT+AGG | + | chr4_4:5741982-5742001 | Msa0665860:intron | 25.0% |
| ! | GATGATAAGCCATTAAAAAA+AGG | + | chr4_4:5742085-5742104 | Msa0665860:intron | 25.0% |
| ! | ATAAGCCATTAAAAAAAGGA+TGG | + | chr4_4:5742089-5742108 | Msa0665860:intron | 25.0% |
| ! | CAAAATATTCTTTCTTCTCT+TGG | - | chr4_4:5742174-5742193 | None:intergenic | 25.0% |
| ! | TCGGATTAAAGTTTGATTAA+TGG | + | chr4_4:5742260-5742279 | Msa0665860:intron | 25.0% |
| ! | TTTGATTAATGGTTAGGATT+TGG | + | chr4_4:5742271-5742290 | Msa0665860:intron | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | + | chr4_4:5742444-5742463 | Msa0665860:intron | 25.0% |
| ! | GCAAGTAAATAACTAAAAAG+TGG | + | chr4_4:5742444-5742463 | Msa0665860:intron | 25.0% |
| ! | CATATTTCCAAAAACATCAT+GGG | - | chr4_4:5742771-5742790 | None:intergenic | 25.0% |
| ! | ACATATTTCCAAAAACATCA+TGG | - | chr4_4:5742772-5742791 | None:intergenic | 25.0% |
| ! | GACTCGTAAAATCAATATAA+AGG | + | chr4_4:5742959-5742978 | Msa0665860:intron | 25.0% |
| ! | TTGAGAAATATTGTTAGAGT+TGG | - | chr4_4:5736106-5736125 | None:intergenic | 25.0% |
| !! | AACATTCTCCTTAATTTTAG+GGG | - | chr4_4:5743194-5743213 | None:intergenic | 25.0% |
| !! | GAACATTCTCCTTAATTTTA+GGG | - | chr4_4:5743195-5743214 | None:intergenic | 25.0% |
| ! | ATGTATCACCATAATTGATT+TGG | + | chr4_4:5743377-5743396 | Msa0665860:intron | 25.0% |
| ! | AATATTACCTTACCAAGTAT+GGG | - | chr4_4:5743529-5743548 | None:intergenic | 25.0% |
| ! | TAATATTACCTTACCAAGTA+TGG | - | chr4_4:5743530-5743549 | None:intergenic | 25.0% |
| ! | AAGGTAATATTAAATGCAAC+TGG | + | chr4_4:5743538-5743557 | Msa0665860:intron | 25.0% |
| ! | AATATTAAATGCAACTGGTT+TGG | + | chr4_4:5743543-5743562 | Msa0665860:intron | 25.0% |
| ! | GTATATATAGCTAGAAAGAA+TGG | + | chr4_4:5743839-5743858 | Msa0665860:intron | 25.0% |
| ! | TTGACTAATTGCAATGTATA+AGG | - | chr4_4:5743928-5743947 | None:intergenic | 25.0% |
| ! | ATAGAAGAATCTTCAGTATA+AGG | - | chr4_4:5744001-5744020 | None:intergenic | 25.0% |
| ! | GTCTTGAATAATAGGATAAA+TGG | - | chr4_4:5744415-5744434 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTCTACTGTGAAC+TGG | + | chr4_4:5735182-5735201 | Msa0665860:intron | 30.0% |
| !!! | TTTTAGTTCTACTGTGAACT+GGG | + | chr4_4:5735183-5735202 | Msa0665860:intron | 30.0% |
| AACATTATCATTAGAAACGG+TGG | - | chr4_4:5735212-5735231 | None:intergenic | 30.0% | |
| ATGAATTATAACTTTGGACC+TGG | + | chr4_4:5735466-5735485 | Msa0665860:intron | 30.0% | |
| AATTCAAACAAGTACATCGT+TGG | - | chr4_4:5735699-5735718 | None:intergenic | 30.0% | |
| TTTATATTGATGTGTGTGCT+TGG | + | chr4_4:5735717-5735736 | Msa0665860:intron | 30.0% | |
| CTTCATTCGAAAAACATCAT+GGG | - | chr4_4:5735870-5735889 | None:intergenic | 30.0% | |
| ACTTCATTCGAAAAACATCA+TGG | - | chr4_4:5735871-5735890 | None:intergenic | 30.0% | |
| AATAGCAGAATGTCATTATC+GGG | - | chr4_4:5735909-5735928 | None:intergenic | 30.0% | |
| CAATAGCAGAATGTCATTAT+CGG | - | chr4_4:5735910-5735929 | None:intergenic | 30.0% | |
| ATTTAGCACAAATGACACAA+CGG | - | chr4_4:5735948-5735967 | None:intergenic | 30.0% | |
| ATACCGCTATTATTGCATTA+TGG | + | chr4_4:5735966-5735985 | Msa0665860:intron | 30.0% | |
| CTACCATAATGCAATAATAG+CGG | - | chr4_4:5735972-5735991 | None:intergenic | 30.0% | |
| TTTCATCATAAAGGGAAAAG+AGG | + | chr4_4:5736017-5736036 | Msa0665860:intron | 30.0% | |
| ! | GAAATATTGTTAGAGTTGGT+TGG | - | chr4_4:5736102-5736121 | None:intergenic | 30.0% |
| TGATATAAAAGAGAATGGGA+GGG | - | chr4_4:5736143-5736162 | None:intergenic | 30.0% | |
| ATGATATAAAAGAGAATGGG+AGG | - | chr4_4:5736144-5736163 | None:intergenic | 30.0% | |
| TTCTTAGCGTATGTTATAGT+CGG | + | chr4_4:5736272-5736291 | Msa0665860:intron | 30.0% | |
| CCTCACCAAATATAGAAAAT+GGG | - | chr4_4:5736446-5736465 | None:intergenic | 30.0% | |
| ACCTCACCAAATATAGAAAA+TGG | - | chr4_4:5736447-5736466 | None:intergenic | 30.0% | |
| ACTGTACAAAGCTTAGATTT+AGG | + | chr4_4:5736687-5736706 | Msa0665860:intron | 30.0% | |
| GTACATAATAATCTCGTTGT+TGG | + | chr4_4:5736728-5736747 | Msa0665860:intron | 30.0% | |
| ! | GTTGGTAAAAGTTTCATCAT+TGG | + | chr4_4:5736746-5736765 | Msa0665860:intron | 30.0% |
| !! | AAAGTTTCATCATTGGTTTC+TGG | + | chr4_4:5736753-5736772 | Msa0665860:intron | 30.0% |
| TGGACTAATTGCAATGTATA+AGG | - | chr4_4:5736849-5736868 | None:intergenic | 30.0% | |
| TTGTGCAAGAATTTAGGTAA+AGG | + | chr4_4:5736876-5736895 | Msa0665860:intron | 30.0% | |
| ATTCATTAAAAAAACTGGGC+AGG | + | chr4_4:5736949-5736968 | Msa0665860:intron | 30.0% | |
| !!! | TTCTTGTTTTTTGTTGATGC+TGG | + | chr4_4:5737050-5737069 | Msa0665860:CDS | 30.0% |
| CAACACTGAATCAATTTCAA+TGG | - | chr4_4:5737162-5737181 | None:intergenic | 30.0% | |
| ! | CATTGAAATTGATTCAGTGT+TGG | + | chr4_4:5737160-5737179 | Msa0665860:CDS | 30.0% |
| TAATATGGAATTGAGTGTGT+TGG | + | chr4_4:5737268-5737287 | Msa0665860:intron | 30.0% | |
| ATCATGAATACAAGGTTCAA+TGG | - | chr4_4:5737294-5737313 | None:intergenic | 30.0% | |
| ACTGTACTCTTTAACCTTAA+TGG | + | chr4_4:5737386-5737405 | Msa0665860:intron | 30.0% | |
| CTCTTTAACCTTAATGGTTT+AGG | + | chr4_4:5737392-5737411 | Msa0665860:intron | 30.0% | |
| GTATCAAACCTAAACCATTA+AGG | - | chr4_4:5737403-5737422 | None:intergenic | 30.0% | |
| !!! | TATTAGTTTTTGAGACTCGT+TGG | + | chr4_4:5737499-5737518 | Msa0665860:intron | 30.0% |
| TCCCAATAAAAAAGACCAAT+TGG | - | chr4_4:5737705-5737724 | None:intergenic | 30.0% | |
| CCATCTTAAATATAATCACG+AGG | - | chr4_4:5738181-5738200 | None:intergenic | 30.0% | |
| CCTCGTGATTATATTTAAGA+TGG | + | chr4_4:5738178-5738197 | Msa0665860:intron | 30.0% | |
| CATTCAACATAAAAGGTCTT+TGG | - | chr4_4:5738751-5738770 | None:intergenic | 30.0% | |
| !! | ATTTTCTTTTTGGGAAAACG+GGG | + | chr4_4:5738908-5738927 | Msa0665860:intron | 30.0% |
| GATTAAGAGCAAAACTCAAA+TGG | + | chr4_4:5739075-5739094 | Msa0665860:intron | 30.0% | |
| CATGAATAGCAGGAAAAAAT+GGG | - | chr4_4:5739331-5739350 | None:intergenic | 30.0% | |
| ATTATGCCATTGAACTTTGA+AGG | + | chr4_4:5739763-5739782 | Msa0665860:intron | 30.0% | |
| TCACATTCCTCTTTAGATAA+AGG | - | chr4_4:5739835-5739854 | None:intergenic | 30.0% | |
| AAGTTAAAATAAAGGTGAGC+AGG | + | chr4_4:5739956-5739975 | Msa0665860:intron | 30.0% | |
| TGAAATCCCTATGTAAGAAA+TGG | + | chr4_4:5740238-5740257 | Msa0665860:intron | 30.0% | |
| ! | GGTTTTCCATTTCTTACATA+GGG | - | chr4_4:5740247-5740266 | None:intergenic | 30.0% |
| AAAATGTACTTACCAATCTG+TGG | - | chr4_4:5740363-5740382 | None:intergenic | 30.0% | |
| AGTAAATGATTAACAGGGAA+GGG | - | chr4_4:5740390-5740409 | None:intergenic | 30.0% | |
| AAGTAAATGATTAACAGGGA+AGG | - | chr4_4:5740391-5740410 | None:intergenic | 30.0% | |
| ! | CTTTAGGAAGTGTGATATTA+TGG | - | chr4_4:5740419-5740438 | None:intergenic | 30.0% |
| TTTATCAGATATTGTCCTTG+TGG | - | chr4_4:5740577-5740596 | None:intergenic | 30.0% | |
| ! | TGTGTTTGTGATTTTGTGTT+TGG | + | chr4_4:5740630-5740649 | Msa0665860:intron | 30.0% |
| AACTAACACTTATAAGGTTG+TGG | + | chr4_4:5740665-5740684 | Msa0665860:intron | 30.0% | |
| !!! | GAGGTGAAAGTTTTTAGTTT+CGG | + | chr4_4:5740714-5740733 | Msa0665860:intron | 30.0% |
| ! | TTAGTTTCGGTGATAATGTT+TGG | + | chr4_4:5740727-5740746 | Msa0665860:intron | 30.0% |
| ATGGATTCAAGAATATATGG+TGG | + | chr4_4:5740801-5740820 | Msa0665860:intron | 30.0% | |
| !!! | GTGATTTTTTCGCTTGATTT+AGG | + | chr4_4:5740888-5740907 | Msa0665860:intron | 30.0% |
| ! | GTTTTTATCATGATTACGAG+GGG | + | chr4_4:5741003-5741022 | Msa0665860:intron | 30.0% |
| AAATTTAGCTATCAGACTCT+TGG | + | chr4_4:5741089-5741108 | Msa0665860:intron | 30.0% | |
| TGATTCTCAGAAAGATGTAA+TGG | - | chr4_4:5741161-5741180 | None:intergenic | 30.0% | |
| AGATAACTGAGTTCAAAACA+TGG | - | chr4_4:5741410-5741429 | None:intergenic | 30.0% | |
| TTGGATTAATGGTTAGGATT+TGG | - | chr4_4:5741574-5741593 | None:intergenic | 30.0% | |
| AATAGTAGGGAGAAATCAAA+TGG | - | chr4_4:5741746-5741765 | None:intergenic | 30.0% | |
| TTCATGTTTATATTGGCCAT+TGG | + | chr4_4:5741809-5741828 | Msa0665860:intron | 30.0% | |
| TGGTATTATTCTTGAGTTCA+TGG | + | chr4_4:5741852-5741871 | Msa0665860:intron | 30.0% | |
| TGCTGCTAATATTATTGTGT+CGG | + | chr4_4:5741898-5741917 | Msa0665860:intron | 30.0% | |
| ! | ACACCCACTAATTTTTATGT+GGG | + | chr4_4:5742412-5742431 | Msa0665860:intron | 30.0% |
| ACTCCCACATAAAAATTAGT+GGG | - | chr4_4:5742650-5742669 | None:intergenic | 30.0% | |
| TTATAGCAACATACACCTTA+GGG | - | chr4_4:5742479-5742498 | None:intergenic | 30.0% | |
| ACCTTCTAACAATAACAAGT+GGG | + | chr4_4:5742502-5742521 | Msa0665860:intron | 30.0% | |
| ACTCCCACATAAAAATTAGT+GGG | + | chr4_4:5742650-5742669 | Msa0665860:intron | 30.0% | |
| ! | ACACCCACTAATTTTTATGT+GGG | - | chr4_4:5742412-5742431 | None:intergenic | 30.0% |
| TAACTTACTTGATGTGTGAT+AGG | + | chr4_4:5742937-5742956 | Msa0665860:intron | 30.0% | |
| ! | ACATTCTCCTTAATTTTAGG+GGG | - | chr4_4:5743193-5743212 | None:intergenic | 30.0% |
| ! | GGAACATTCTCCTTAATTTT+AGG | - | chr4_4:5743196-5743215 | None:intergenic | 30.0% |
| CCTAATATAATACAAGTGCT+TGG | - | chr4_4:5743320-5743339 | None:intergenic | 30.0% | |
| CCAAGCACTTGTATTATATT+AGG | + | chr4_4:5743317-5743336 | Msa0665860:intron | 30.0% | |
| CAAACTGTCCAAATCAATTA+TGG | - | chr4_4:5743388-5743407 | None:intergenic | 30.0% | |
| !! | AATTGATTTGGACAGTTTGT+TGG | + | chr4_4:5743389-5743408 | Msa0665860:intron | 30.0% |
| GATATTATGCGGAATTCTAT+GGG | - | chr4_4:5743500-5743519 | None:intergenic | 30.0% | |
| GGATGCTATACTATTCAAAT+TGG | + | chr4_4:5743564-5743583 | Msa0665860:intron | 30.0% | |
| TATTTCATGTTATGAGGATG+AGG | + | chr4_4:5743632-5743651 | Msa0665860:intron | 30.0% | |
| GGATGAGGTTAATGAAATTA+TGG | + | chr4_4:5743647-5743666 | Msa0665860:intron | 30.0% | |
| TGAAATCTAGATGAAGTGAT+GGG | + | chr4_4:5743680-5743699 | Msa0665860:intron | 30.0% | |
| ACTGAACAAAGCTTAGATTT+AGG | + | chr4_4:5743731-5743750 | Msa0665860:intron | 30.0% | |
| ! | TTTGAACGTGCTAGAATTTT+AGG | + | chr4_4:5743950-5743969 | Msa0665860:intron | 30.0% |
| AAAGGTTCTTCTGTAGTTAA+AGG | + | chr4_4:5743974-5743993 | Msa0665860:intron | 30.0% | |
| TCATTGAAAAATAACTGTGC+AGG | + | chr4_4:5744057-5744076 | Msa0665860:intron | 30.0% | |
| ACAAAAAACAATTCAGCAGT+TGG | - | chr4_4:5744151-5744170 | None:intergenic | 30.0% | |
| ATGGTTGTTTATAACCAATC+TGG | + | chr4_4:5744211-5744230 | Msa0665860:CDS | 30.0% | |
| TTCATCAACACACAAACACT+CGG | - | chr4_4:5735328-5735347 | None:intergenic | 35.0% | |
| TGATTCTCAGAAAGATGCAA+TGG | - | chr4_4:5735514-5735533 | None:intergenic | 35.0% | |
| ! | TTCTGAGAATCATGATACAG+TGG | + | chr4_4:5735522-5735541 | Msa0665860:intron | 35.0% |
| ACGATGCAATTCTCTATAAC+TGG | + | chr4_4:5735566-5735585 | Msa0665860:intron | 35.0% | |
| !! | TGGTTAGGAGTTTTATACTC+TGG | - | chr4_4:5736066-5736085 | None:intergenic | 35.0% |
| TTAAATAAGCTTCACGGTGT+TGG | + | chr4_4:5736382-5736401 | Msa0665860:intron | 35.0% | |
| !! | CCCATTTTCTATATTTGGTG+AGG | + | chr4_4:5736443-5736462 | Msa0665860:intron | 35.0% |
| GAGGTAATATTGAATGCAAC+TGG | + | chr4_4:5736462-5736481 | Msa0665860:intron | 35.0% | |
| ! | TGAAATCTAGATGAAGTGCT+GGG | + | chr4_4:5736634-5736653 | Msa0665860:intron | 35.0% |
| ATAGCTAGAATGGACAAGTT+TGG | + | chr4_4:5736800-5736819 | Msa0665860:intron | 35.0% | |
| ! | TGAAATTGATTCAGTGTTGG+CGG | + | chr4_4:5737163-5737182 | Msa0665860:CDS | 35.0% |
| TGAAGCTGTGGTCATTAATA+TGG | + | chr4_4:5737253-5737272 | Msa0665860:intron | 35.0% | |
| ! | GTTTGACGATGATGTTGTTT+AGG | + | chr4_4:5738014-5738033 | Msa0665860:intron | 35.0% |
| TTTAGTGCTCTGATACGTAA+CGG | + | chr4_4:5738619-5738638 | Msa0665860:intron | 35.0% | |
| AGTAATTCAAAACTTCGCAG+CGG | - | chr4_4:5738782-5738801 | None:intergenic | 35.0% | |
| !! | ATGGTCATTTTAGCATTAGC+TGG | + | chr4_4:5738938-5738957 | Msa0665860:intron | 35.0% |
| ! | TCAGACTTTTGAATATGGGA+TGG | - | chr4_4:5738985-5739004 | None:intergenic | 35.0% |
| ! | CGACTCAGACTTTTGAATAT+GGG | - | chr4_4:5738989-5739008 | None:intergenic | 35.0% |
| CCATATTCAAAAGTCTGAGT+CGG | + | chr4_4:5738987-5739006 | Msa0665860:intron | 35.0% | |
| GCAAATATGACGAGTCATTT+GGG | - | chr4_4:5739106-5739125 | None:intergenic | 35.0% | |
| TGCAAATATGACGAGTCATT+TGG | - | chr4_4:5739107-5739126 | None:intergenic | 35.0% | |
| AATTTAGTAGAGGAAGGAGA+TGG | - | chr4_4:5739293-5739312 | None:intergenic | 35.0% | |
| GCATGAATAGCAGGAAAAAA+TGG | - | chr4_4:5739332-5739351 | None:intergenic | 35.0% | |
| ACAGTCATATTGAAGACGAT+GGG | - | chr4_4:5739479-5739498 | None:intergenic | 35.0% | |
| AACAGTCATATTGAAGACGA+TGG | - | chr4_4:5739480-5739499 | None:intergenic | 35.0% | |
| AGCAGATATGAACTGATTGA+TGG | + | chr4_4:5739622-5739641 | Msa0665860:intron | 35.0% | |
| AGATATGAACTGATTGATGG+TGG | + | chr4_4:5739625-5739644 | Msa0665860:intron | 35.0% | |
| TTAGAGATTTGACTGGAAGT+CGG | - | chr4_4:5740212-5740231 | None:intergenic | 35.0% | |
| ! | GGGTTTTCCATTTCTTACAT+AGG | - | chr4_4:5740248-5740267 | None:intergenic | 35.0% |
| GAATGAAGGATGAGAGATTA+GGG | - | chr4_4:5740268-5740287 | None:intergenic | 35.0% | |
| TGAATGAAGGATGAGAGATT+AGG | - | chr4_4:5740269-5740288 | None:intergenic | 35.0% | |
| TTCAACATATCTCCACAGAT+TGG | + | chr4_4:5740348-5740367 | Msa0665860:intron | 35.0% | |
| AACTGGTAGTAAGGATCTTT+AGG | - | chr4_4:5740435-5740454 | None:intergenic | 35.0% | |
| TCGTCATTTAACTGGTAGTA+AGG | - | chr4_4:5740444-5740463 | None:intergenic | 35.0% | |
| TGACGATAAATATTGTTGCG+TGG | + | chr4_4:5740458-5740477 | Msa0665860:intron | 35.0% | |
| AAATATTGTTGCGTGGTTGT+TGG | + | chr4_4:5740465-5740484 | Msa0665860:intron | 35.0% | |
| ! | TGTATGATAGCGATCATATC+TGG | + | chr4_4:5740607-5740626 | Msa0665860:intron | 35.0% |
| ATCAATACCATCATAGTGCA+AGG | - | chr4_4:5740691-5740710 | None:intergenic | 35.0% | |
| ! | TTGCACTATGATGGTATTGA+TGG | + | chr4_4:5740690-5740709 | Msa0665860:intron | 35.0% |
| !! | TGCACTATGATGGTATTGAT+GGG | + | chr4_4:5740691-5740710 | Msa0665860:intron | 35.0% |
| ! | AAAATTTACCTTTTGCGGCT+AGG | + | chr4_4:5740760-5740779 | Msa0665860:intron | 35.0% |
| TTCGTCAACACACAAACATT+CGG | - | chr4_4:5740975-5740994 | None:intergenic | 35.0% | |
| ! | TTCTGAGAATCATGATACAG+TGG | + | chr4_4:5735522-5735541 | Msa0665860:intron | 35.0% |
| GAATTACCAAGAAGATGCAT+TGG | + | chr4_4:5741261-5741280 | Msa0665860:intron | 35.0% | |
| AATTCAAACAGGTACATCGT+TGG | - | chr4_4:5741346-5741365 | None:intergenic | 35.0% | |
| TGAGTTCAAAACATGGTAAC+AGG | - | chr4_4:5741403-5741422 | None:intergenic | 35.0% | |
| GAGAGACGTTAGATTAATGT+TGG | - | chr4_4:5741593-5741612 | None:intergenic | 35.0% | |
| !! | CTACGCTTTCATTTGTTGTA+TGG | + | chr4_4:5741832-5741851 | Msa0665860:intron | 35.0% |
| GCTGCTAATATTATTGTGTC+GGG | + | chr4_4:5741899-5741918 | Msa0665860:intron | 35.0% | |
| !!! | CACTGCCATCCTTTTTTTAA+TGG | - | chr4_4:5742097-5742116 | None:intergenic | 35.0% |
| AATGAATTGATGAGAGACGT+CGG | + | chr4_4:5742241-5742260 | Msa0665860:intron | 35.0% | |
| ! | CACACCCACTAATTTTTATG+TGG | + | chr4_4:5742411-5742430 | Msa0665860:intron | 35.0% |
| CACTCCCACATAAAAATTAG+TGG | - | chr4_4:5742649-5742668 | None:intergenic | 35.0% | |
| AAGTGGTTAAATACACCCTA+AGG | + | chr4_4:5742461-5742480 | Msa0665860:intron | 35.0% | |
| GTTATAGCAACATACACCTT+AGG | - | chr4_4:5742480-5742499 | None:intergenic | 35.0% | |
| CACCTTCTAACAATAACAAG+TGG | + | chr4_4:5742501-5742520 | Msa0665860:intron | 35.0% | |
| !! | ACCCACTTGTTATTGTTAGA+AGG | - | chr4_4:5742506-5742525 | None:intergenic | 35.0% |
| TGTGTTCTAGCAAATCCTAT+AGG | + | chr4_4:5742525-5742544 | Msa0665860:intron | 35.0% | |
| AAGTGGTTAATTACACCCTA+AGG | + | chr4_4:5742610-5742629 | Msa0665860:intron | 35.0% | |
| TTTAGCAAAGCTACACCTTA+GGG | - | chr4_4:5742628-5742647 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAAGCTACACCTT+AGG | - | chr4_4:5742629-5742648 | None:intergenic | 35.0% |
| CACTCCCACATAAAAATTAG+TGG | + | chr4_4:5742649-5742668 | Msa0665860:intron | 35.0% | |
| ! | CACACCCACTAATTTTTATG+TGG | - | chr4_4:5742411-5742430 | None:intergenic | 35.0% |
| ! | AAGTACACCCATGATGTTTT+TGG | + | chr4_4:5735860-5735879 | Msa0665860:intron | 35.0% |
| TATCACTCACTTAACTGTGT+AGG | + | chr4_4:5742821-5742840 | Msa0665860:intron | 35.0% | |
| ! | ATACTCGTCTATAGGAGTAT+AGG | - | chr4_4:5742861-5742880 | None:intergenic | 35.0% |
| CAGTTAAGATACTCGTCTAT+AGG | - | chr4_4:5742869-5742888 | None:intergenic | 35.0% | |
| !! | TAGGAGTTTTATACTCTGGT+AGG | - | chr4_4:5743082-5743101 | None:intergenic | 35.0% |
| !! | TGGTTAGGAGTTTTATACTC+TGG | - | chr4_4:5736066-5736085 | None:intergenic | 35.0% |
| ATTCTGACATAAGAGGAAAG+GGG | - | chr4_4:5743167-5743186 | None:intergenic | 35.0% | |
| CATTCTGACATAAGAGGAAA+GGG | - | chr4_4:5743168-5743187 | None:intergenic | 35.0% | |
| ACATTCTGACATAAGAGGAA+AGG | - | chr4_4:5743169-5743188 | None:intergenic | 35.0% | |
| GAATGTTCCCCCTAAAATTA+AGG | + | chr4_4:5743183-5743202 | Msa0665860:intron | 35.0% | |
| AAGAGAGGGAATATGAGTTA+GGG | - | chr4_4:5743219-5743238 | None:intergenic | 35.0% | |
| TTGGAGTTCATATTCTCACA+AGG | - | chr4_4:5743301-5743320 | None:intergenic | 35.0% | |
| CTATAGCATACACTTAGAAC+TGG | - | chr4_4:5743347-5743366 | None:intergenic | 35.0% | |
| GGATATTATGCGGAATTCTA+TGG | - | chr4_4:5743501-5743520 | None:intergenic | 35.0% | |
| CTGAAATCTAGATGAAGTGA+TGG | + | chr4_4:5743679-5743698 | Msa0665860:intron | 35.0% | |
| ! | GTTGGTAAGAGTTTCATCAT+TGG | + | chr4_4:5743790-5743809 | Msa0665860:intron | 35.0% |
| !! | GAGTTTCATCATTGGTTTCT+TGG | + | chr4_4:5743798-5743817 | Msa0665860:intron | 35.0% |
| CTAGAAAGAATGGACAAGTT+TGG | + | chr4_4:5743849-5743868 | Msa0665860:intron | 35.0% | |
| !! | CGTGCTAGAATTTTAGGTAA+AGG | + | chr4_4:5743956-5743975 | Msa0665860:intron | 35.0% |
| TGTTTATAACCAATCTGGTG+TGG | + | chr4_4:5744216-5744235 | Msa0665860:CDS | 35.0% | |
| CAACACTGGATCAATTTCAA+TGG | - | chr4_4:5744269-5744288 | None:intergenic | 35.0% | |
| CATTGAAATTGATCCAGTGT+TGG | + | chr4_4:5744267-5744286 | Msa0665860:CDS | 35.0% | |
| AAGCAATAGCAATACTCTAC+AGG | - | chr4_4:5744341-5744360 | None:intergenic | 35.0% | |
| ATTAACCACAGTTTCAGCAT+TGG | - | chr4_4:5744364-5744383 | None:intergenic | 35.0% | |
| GTCATTGTTTCGCTTGACTT+AGG | + | chr4_4:5735241-5735260 | Msa0665860:intron | 40.0% | |
| !! | AGGCGACCGATTTTGTTATA+TGG | + | chr4_4:5735374-5735393 | Msa0665860:intron | 40.0% |
| AATTCAAAATGCAAGCGACC+AGG | - | chr4_4:5735487-5735506 | None:intergenic | 40.0% | |
| GAATCATGATACAGTGGTGT+TGG | + | chr4_4:5735528-5735547 | Msa0665860:intron | 40.0% | |
| AGAGAATTGCATCGTCTTGT+AGG | - | chr4_4:5735561-5735580 | None:intergenic | 40.0% | |
| GAACGATTATGTCGAAAGCT+TGG | + | chr4_4:5735645-5735664 | Msa0665860:intron | 40.0% | |
| CATCATGGGTGTACTTGAAT+TGG | - | chr4_4:5735856-5735875 | None:intergenic | 40.0% | |
| !! | TAGGAGTTTTATACTCTGGC+AGG | - | chr4_4:5736062-5736081 | None:intergenic | 40.0% |
| ! | ATTGTTAGAGTTGGTTGGGA+GGG | - | chr4_4:5736097-5736116 | None:intergenic | 40.0% |
| ! | TATTGTTAGAGTTGGTTGGG+AGG | - | chr4_4:5736098-5736117 | None:intergenic | 40.0% |
| ACACTGATAAGACACCTAGA+GGG | - | chr4_4:5736170-5736189 | None:intergenic | 40.0% | |
| CCTTATTCTCACAACTCACA+AGG | - | chr4_4:5736218-5736237 | None:intergenic | 40.0% | |
| CCTTGTGAGTTGTGAGAATA+AGG | + | chr4_4:5736215-5736234 | Msa0665860:intron | 40.0% | |
| CCTTAACCAAGATCTTCTCA+CGG | - | chr4_4:5736568-5736587 | None:intergenic | 40.0% | |
| CTGAAATCTAGATGAAGTGC+TGG | + | chr4_4:5736633-5736652 | Msa0665860:intron | 40.0% | |
| ATGGTTGCTTGTAACCAATC+TGG | + | chr4_4:5737104-5737123 | Msa0665860:CDS | 40.0% | |
| AAAATTGCACCACACCAGAT+TGG | - | chr4_4:5737121-5737140 | None:intergenic | 40.0% | |
| ! | CAGCATCGAAAATACTGTTC+AGG | - | chr4_4:5737235-5737254 | None:intergenic | 40.0% |
| ! | TATTTTCGATGCTGAAGCTG+TGG | + | chr4_4:5737241-5737260 | Msa0665860:intron | 40.0% |
| GCGTCGGATAATTAAGCTAA+TGG | - | chr4_4:5737563-5737582 | None:intergenic | 40.0% | |
| AATGCGTTGAGAGTTTGGAA+GGG | - | chr4_4:5737733-5737752 | None:intergenic | 40.0% | |
| AAATGCGTTGAGAGTTTGGA+AGG | - | chr4_4:5737734-5737753 | None:intergenic | 40.0% | |
| ATGCAAATGCGTTGAGAGTT+TGG | - | chr4_4:5737738-5737757 | None:intergenic | 40.0% | |
| TGGAAATGTTGCTCTTCGTA+TGG | + | chr4_4:5738538-5738557 | Msa0665860:intron | 40.0% | |
| GGAAATGTTGCTCTTCGTAT+GGG | + | chr4_4:5738539-5738558 | Msa0665860:intron | 40.0% | |
| TTAGTGCTCTGATACGTAAC+GGG | + | chr4_4:5738620-5738639 | Msa0665860:intron | 40.0% | |
| ! | TGGTTGCCTCAAGGTTATTT+TGG | + | chr4_4:5738958-5738977 | Msa0665860:intron | 40.0% |
| GATGGACCAAAATAACCTTG+AGG | - | chr4_4:5738967-5738986 | None:intergenic | 40.0% | |
| ! | CCGACTCAGACTTTTGAATA+TGG | - | chr4_4:5738990-5739009 | None:intergenic | 40.0% |
| !!! | CTGGTTTTGACTAGGATAAG+TGG | - | chr4_4:5739016-5739035 | None:intergenic | 40.0% |
| !!! | TGACATGTCTGGTTTTGACT+AGG | - | chr4_4:5739024-5739043 | None:intergenic | 40.0% |
| CCAATTGAAGCATGAATAGC+AGG | - | chr4_4:5739341-5739360 | None:intergenic | 40.0% | |
| CCTGCTATTCATGCTTCAAT+TGG | + | chr4_4:5739338-5739357 | Msa0665860:intron | 40.0% | |
| ! | TGTTACAGTCAGAGCTTTGA+AGG | - | chr4_4:5739367-5739386 | None:intergenic | 40.0% |
| AGAGACTGAAAATCCAGTCA+CGG | - | chr4_4:5739427-5739446 | None:intergenic | 40.0% | |
| ! | ATGACCAAATCTAAGACGAC+TGG | - | chr4_4:5739454-5739473 | None:intergenic | 40.0% |
| TTCTTCCATTGTCTCAGATC+TGG | + | chr4_4:5739499-5739518 | Msa0665860:intron | 40.0% | |
| AGACCTGTAGAGAAGATGAA+GGG | + | chr4_4:5739554-5739573 | Msa0665860:intron | 40.0% | |
| GGAAGACAATATTGCAGAGA+AGG | + | chr4_4:5739575-5739594 | Msa0665860:intron | 40.0% | |
| !! | TATGAACTGATTGATGGTGG+TGG | + | chr4_4:5739628-5739647 | Msa0665860:intron | 40.0% |
| !! | ATGAACTGATTGATGGTGGT+GGG | + | chr4_4:5739629-5739648 | Msa0665860:intron | 40.0% |
| ! | GTGATGATTTGGAATGAGAG+CGG | - | chr4_4:5740140-5740159 | None:intergenic | 40.0% |
| ATTTCGATGATAAGCTCGTC+GGG | - | chr4_4:5740183-5740202 | None:intergenic | 40.0% | |
| GATTTCGATGATAAGCTCGT+CGG | - | chr4_4:5740184-5740203 | None:intergenic | 40.0% | |
| TAGAGATTTGACTGGAAGTC+GGG | - | chr4_4:5740211-5740230 | None:intergenic | 40.0% | |
| !! | TGTTGGTTCTTGCAATGGAT+TGG | + | chr4_4:5740482-5740501 | Msa0665860:intron | 40.0% |
| !! | GCACTATGATGGTATTGATG+GGG | + | chr4_4:5740692-5740711 | Msa0665860:intron | 40.0% |
| !! | AGGGGACCGATTTTGTTATA+TGG | + | chr4_4:5741021-5741040 | Msa0665860:intron | 40.0% |
| GAATCATGATACAGTGGTGT+TGG | + | chr4_4:5735528-5735547 | Msa0665860:intron | 40.0% | |
| ! | AGAGAATTGCACGGTTTTCT+AGG | - | chr4_4:5741208-5741227 | None:intergenic | 40.0% |
| ACCGTGCAATTCTCTATAAC+CGG | + | chr4_4:5741213-5741232 | Msa0665860:intron | 40.0% | |
| TCCGGTTATAGAGAATTGCA+CGG | - | chr4_4:5741217-5741236 | None:intergenic | 40.0% | |
| ! | TCTTTGCTCTGTTAGTTCTC+CGG | - | chr4_4:5741235-5741254 | None:intergenic | 40.0% |
| AGAGAACCAATGCATCTTCT+TGG | - | chr4_4:5741270-5741289 | None:intergenic | 40.0% | |
| GAACGATTATGTCGAAAGCT+TGG | + | chr4_4:5735645-5735664 | Msa0665860:intron | 40.0% | |
| GATAGGATCAAATGACACCA+AGG | + | chr4_4:5741529-5741548 | Msa0665860:intron | 40.0% | |
| ! | ACAAATGAAAGCGTAGCCAA+TGG | - | chr4_4:5741828-5741847 | None:intergenic | 40.0% |
| GATAGGATCAAATGACACCA+AGG | - | chr4_4:5741529-5741548 | None:intergenic | 40.0% | |
| GTGTTCTAGCAAATGCCTAT+AGG | - | chr4_4:5742543-5742562 | None:intergenic | 40.0% | |
| !!! | ACACCCACTGGTTTTTATGT+GGG | + | chr4_4:5742561-5742580 | Msa0665860:intron | 40.0% |
| ACTCCCACATAAAAACCAGT+GGG | - | chr4_4:5742567-5742586 | None:intergenic | 40.0% | |
| CCAATATCTAGACAAGCTTC+AGG | - | chr4_4:5742899-5742918 | None:intergenic | 40.0% | |
| CCTGAAGCTTGTCTAGATAT+TGG | + | chr4_4:5742896-5742915 | Msa0665860:intron | 40.0% | |
| GAGTGGTGGTAAAACAGAAA+AGG | + | chr4_4:5743029-5743048 | Msa0665860:intron | 40.0% | |
| AGAAGAGTTTCTCTCTGGTT+AGG | - | chr4_4:5743101-5743120 | None:intergenic | 40.0% | |
| TGGTTAGAAGAGTTTCTCTC+TGG | - | chr4_4:5743106-5743125 | None:intergenic | 40.0% | |
| AGAGAGGGAATATGAGTTAG+GGG | - | chr4_4:5743218-5743237 | None:intergenic | 40.0% | |
| CAAGAGAGGGAATATGAGTT+AGG | - | chr4_4:5743220-5743239 | None:intergenic | 40.0% | |
| CTAACTCATATTCCCTCTCT+TGG | + | chr4_4:5743218-5743237 | Msa0665860:intron | 40.0% | |
| ACTGATAAGACACCTAGACA+AGG | - | chr4_4:5743254-5743273 | None:intergenic | 40.0% | |
| TGCGGAATTCTATGGGTTTA+AGG | - | chr4_4:5743493-5743512 | None:intergenic | 40.0% | |
| ATGGGAAGTGGGATATTATG+CGG | - | chr4_4:5743511-5743530 | None:intergenic | 40.0% | |
| AATATCCCACTTCCCATACT+TGG | + | chr4_4:5743514-5743533 | Msa0665860:intron | 40.0% | |
| GTACGCAATAATCTCGTAGT+TGG | + | chr4_4:5743772-5743791 | Msa0665860:intron | 40.0% | |
| TGCTTTACAGGTGGTTTATC+TGG | + | chr4_4:5744181-5744200 | Msa0665860:intron | 40.0% | |
| TTACAGGTGGTTTATCTGGA+TGG | + | chr4_4:5744185-5744204 | Msa0665860:intron | 40.0% | |
| TACAGGTGGTTTATCTGGAT+GGG | + | chr4_4:5744186-5744205 | Msa0665860:intron | 40.0% | |
| AAAATTGCACCACACCAGAT+TGG | - | chr4_4:5737121-5737140 | None:intergenic | 40.0% | |
| ! | TGTGGTGCAATTTTCAGCTT+GGG | + | chr4_4:5737127-5737146 | Msa0665860:CDS | 40.0% |
| ! | TGAAATTGATCCAGTGTTGG+CGG | + | chr4_4:5744270-5744289 | Msa0665860:CDS | 40.0% |
| CTGGAGAACTAACAGAGCAA+AGG | + | chr4_4:5735585-5735604 | Msa0665860:intron | 45.0% | |
| ! | AGGACACTTTTATTGACCGC+AGG | + | chr4_4:5735605-5735624 | Msa0665860:intron | 45.0% |
| TTATTGACCGCAGGATACGT+TGG | + | chr4_4:5735614-5735633 | Msa0665860:intron | 45.0% | |
| !! | GGCAGGAGTGTTCAAACATT+TGG | - | chr4_4:5736045-5736064 | None:intergenic | 45.0% |
| CACACTGATAAGACACCTAG+AGG | - | chr4_4:5736171-5736190 | None:intergenic | 45.0% | |
| TTCATGCCGTGAGAAGATCT+TGG | + | chr4_4:5736559-5736578 | Msa0665860:intron | 45.0% | |
| CCGTGAGAAGATCTTGGTTA+AGG | + | chr4_4:5736565-5736584 | Msa0665860:intron | 45.0% | |
| ! | GTTGATGCTGGTTGCTTTAC+AGG | + | chr4_4:5737062-5737081 | Msa0665860:CDS | 45.0% |
| TTACAGGTGGTATAGCTGCA+TGG | + | chr4_4:5737078-5737097 | Msa0665860:CDS | 45.0% | |
| TACAGGTGGTATAGCTGCAT+GGG | + | chr4_4:5737079-5737098 | Msa0665860:CDS | 45.0% | |
| TGCTTGTAACCAATCTGGTG+TGG | + | chr4_4:5737109-5737128 | Msa0665860:CDS | 45.0% | |
| TAATTATCCGACGCCTCACA+TGG | + | chr4_4:5737569-5737588 | Msa0665860:intron | 45.0% | |
| GAGATATGGTTCAGCCATGT+GGG | - | chr4_4:5737616-5737635 | None:intergenic | 45.0% | |
| TGAGATATGGTTCAGCCATG+TGG | - | chr4_4:5737617-5737636 | None:intergenic | 45.0% | |
| AGAAATCTCACCTCTCTGCT+TGG | + | chr4_4:5738518-5738537 | Msa0665860:intron | 45.0% | |
| AGCAACATTTCCAAGCAGAG+AGG | - | chr4_4:5738531-5738550 | None:intergenic | 45.0% | |
| TGCTCTTCGTATGGGTAACT+TGG | + | chr4_4:5738547-5738566 | Msa0665860:intron | 45.0% | |
| TCTTCGTATGGGTAACTTGG+AGG | + | chr4_4:5738550-5738569 | Msa0665860:intron | 45.0% | |
| GGGTAACTTGGAGGTAATCA+AGG | + | chr4_4:5738559-5738578 | Msa0665860:intron | 45.0% | |
| ATCAAGGTTATCTGCAGTCG+TGG | + | chr4_4:5738575-5738594 | Msa0665860:intron | 45.0% | |
| TCAAGGTTATCTGCAGTCGT+GGG | + | chr4_4:5738576-5738595 | Msa0665860:intron | 45.0% | |
| ATAAAAGGTCTTTGGCACGC+AGG | - | chr4_4:5738743-5738762 | None:intergenic | 45.0% | |
| ! | GAGATGGTGGTTAAAGCGTA+GGG | - | chr4_4:5739277-5739296 | None:intergenic | 45.0% |
| TTAGTAGAGGAAGGAGATGG+TGG | - | chr4_4:5739290-5739309 | None:intergenic | 45.0% | |
| !! | TAACTTATGGTGGACAGTGG+TGG | - | chr4_4:5739393-5739412 | None:intergenic | 45.0% |
| ACCACTGTCCACCATAAGTT+AGG | + | chr4_4:5739392-5739411 | Msa0665860:intron | 45.0% | |
| !! | TCCTAACTTATGGTGGACAG+TGG | - | chr4_4:5739396-5739415 | None:intergenic | 45.0% |
| CACTCCAGTCGTCTTAGATT+TGG | + | chr4_4:5739447-5739466 | Msa0665860:intron | 45.0% | |
| CAGACCTGTAGAGAAGATGA+AGG | + | chr4_4:5739553-5739572 | Msa0665860:intron | 45.0% | |
| CTTCCCTTCATCTTCTCTAC+AGG | - | chr4_4:5739560-5739579 | None:intergenic | 45.0% | |
| CAATATTGCAGAGAAGGCCA+TGG | + | chr4_4:5739581-5739600 | Msa0665860:intron | 45.0% | |
| !! | TGAACTGATTGATGGTGGTG+GGG | + | chr4_4:5739630-5739649 | Msa0665860:intron | 45.0% |
| TTTCGATGATAAGCTCGTCG+GGG | - | chr4_4:5740182-5740201 | None:intergenic | 45.0% | |
| ATTTGACTGGAAGTCGGGAT+AGG | - | chr4_4:5740206-5740225 | None:intergenic | 45.0% | |
| !! | GTGGTTGTTGGTTCTTGCAA+TGG | + | chr4_4:5740477-5740496 | Msa0665860:intron | 45.0% |
| CAGATATTGTCCTTGTGGCA+GGG | - | chr4_4:5740572-5740591 | None:intergenic | 45.0% | |
| TCAGATATTGTCCTTGTGGC+AGG | - | chr4_4:5740573-5740592 | None:intergenic | 45.0% | |
| !! | CTATGATGGTATTGATGGGG+AGG | + | chr4_4:5740695-5740714 | Msa0665860:intron | 45.0% |
| ! | ATTTACCTTTTGCGGCTAGG+AGG | + | chr4_4:5740763-5740782 | Msa0665860:intron | 45.0% |
| GAGGTTGACTACCGTTTCTA+TGG | + | chr4_4:5740782-5740801 | Msa0665860:intron | 45.0% | |
| ! | ATTTGCTAGAACACACCCAC+TGG | + | chr4_4:5742549-5742568 | Msa0665860:intron | 45.0% |
| !!! | CACACCCACTGGTTTTTATG+TGG | + | chr4_4:5742560-5742579 | Msa0665860:intron | 45.0% |
| CACTCCCACATAAAAACCAG+TGG | - | chr4_4:5742568-5742587 | None:intergenic | 45.0% | |
| CATCATGGGTGTACTTGAAC+TGG | - | chr4_4:5742757-5742776 | None:intergenic | 45.0% | |
| TGAGCTCAAGAGCTCTACAA+TGG | + | chr4_4:5743007-5743026 | Msa0665860:intron | 45.0% | |
| TCAAGAGCTCTACAATGGAG+TGG | + | chr4_4:5743012-5743031 | Msa0665860:intron | 45.0% | |
| TGACATAAGAGGAAAGGGGA+GGG | - | chr4_4:5743163-5743182 | None:intergenic | 45.0% | |
| GGGGAACATTCTGACATAAG+AGG | - | chr4_4:5743174-5743193 | None:intergenic | 45.0% | |
| GAGAGGGAATATGAGTTAGG+GGG | - | chr4_4:5743217-5743236 | None:intergenic | 45.0% | |
| GGCACATTCTTTCCAAGAGA+GGG | - | chr4_4:5743233-5743252 | None:intergenic | 45.0% | |
| AGGCACATTCTTTCCAAGAG+AGG | - | chr4_4:5743234-5743253 | None:intergenic | 45.0% | |
| GGAAAGAATGTGCCTTGTCT+AGG | + | chr4_4:5743239-5743258 | Msa0665860:intron | 45.0% | |
| CCTTACCAAGTATGGGAAGT+GGG | - | chr4_4:5743522-5743541 | None:intergenic | 45.0% | |
| ACCTTACCAAGTATGGGAAG+TGG | - | chr4_4:5743523-5743542 | None:intergenic | 45.0% | |
| ! | GTTGATGCTGCTTGCTTTAC+AGG | + | chr4_4:5744169-5744188 | Msa0665860:intron | 45.0% |
| ACAGGTGGTTTATCTGGATG+GGG | + | chr4_4:5744187-5744206 | Msa0665860:intron | 45.0% | |
| ! | GTGTGGTGCAATTTTCAGCT+TGG | + | chr4_4:5737126-5737145 | Msa0665860:CDS | 45.0% |
| TGCTTCCAATGCTGAAACTG+TGG | + | chr4_4:5744356-5744375 | Msa0665860:three_prime_UTR | 45.0% | |
| !!! | TTATTTCTAAAATTAAAATT+TGG | - | chr4_4:5741653-5741672 | None:intergenic | 5.0% |
| !! | AAGAAAAATAAAAATAAAAA+AGG | + | chr4_4:5742040-5742059 | Msa0665860:intron | 5.0% |
| !!! | ATAATATTATCATATAATTT+TGG | + | chr4_4:5742137-5742156 | Msa0665860:intron | 5.0% |
| !! | ATATATATATTTATATATAG+GGG | + | chr4_4:5742378-5742397 | Msa0665860:intron | 5.0% |
| !! | ATATATATATATATTATATG+GGG | - | chr4_4:5742690-5742709 | None:intergenic | 5.0% |
| TTCTCATAACCTGGAGGAGG+AGG | - | chr4_4:5735289-5735308 | None:intergenic | 50.0% | |
| TCCTCCTCCAGGTTATGAGA+AGG | + | chr4_4:5735288-5735307 | Msa0665860:intron | 50.0% | |
| ACCTTCTCATAACCTGGAGG+AGG | - | chr4_4:5735292-5735311 | None:intergenic | 50.0% | |
| TCCTCCAGGTTATGAGAAGG+TGG | + | chr4_4:5735291-5735310 | Msa0665860:intron | 50.0% | |
| TAGAGAGCCAACGTATCCTG+CGG | - | chr4_4:5735624-5735643 | None:intergenic | 50.0% | |
| GTTGGTCAGAGAGCTGTTCT+AGG | - | chr4_4:5737001-5737020 | None:intergenic | 50.0% | |
| ! | GATGCTGGTTGCTTTACAGG+TGG | + | chr4_4:5737065-5737084 | Msa0665860:CDS | 50.0% |
| ACAGGTGGTATAGCTGCATG+GGG | + | chr4_4:5737080-5737099 | Msa0665860:CDS | 50.0% | |
| TGGTATAGCTGCATGGGGAA+TGG | + | chr4_4:5737085-5737104 | Msa0665860:CDS | 50.0% | |
| GTCATAACCATGTGAGGCGT+CGG | - | chr4_4:5737579-5737598 | None:intergenic | 50.0% | |
| AGGCGAGTCATAACCATGTG+AGG | - | chr4_4:5737585-5737604 | None:intergenic | 50.0% | |
| TCGCCTATTACTCTCCCACA+TGG | + | chr4_4:5737599-5737618 | Msa0665860:intron | 50.0% | |
| CAGCCATGTGGGAGAGTAAT+AGG | - | chr4_4:5737605-5737624 | None:intergenic | 50.0% | |
| ! | TGCTCTGATACGTAACGGGA+TGG | + | chr4_4:5738624-5738643 | Msa0665860:intron | 50.0% |
| ! | GCTCTGATACGTAACGGGAT+GGG | + | chr4_4:5738625-5738644 | Msa0665860:intron | 50.0% |
| ! | GGGAAAACGGGGTGTTACAA+TGG | + | chr4_4:5738919-5738938 | Msa0665860:intron | 50.0% |
| AGCATTAGCTGGTTGCCTCA+AGG | + | chr4_4:5738949-5738968 | Msa0665860:intron | 50.0% | |
| TGACGTGACAGTGACATGTC+TGG | - | chr4_4:5739035-5739054 | None:intergenic | 50.0% | |
| TAAAGCGTAGGGTTCGAGAG+AGG | - | chr4_4:5739266-5739285 | None:intergenic | 50.0% | |
| ! | GGAGATGGTGGTTAAAGCGT+AGG | - | chr4_4:5739278-5739297 | None:intergenic | 50.0% |
| CGCGAGATCCTAACTTATGG+TGG | - | chr4_4:5739403-5739422 | None:intergenic | 50.0% | |
| GGTCGCGAGATCCTAACTTA+TGG | - | chr4_4:5739406-5739425 | None:intergenic | 50.0% | |
| ! | GACGACCAGATCTGAGACAA+TGG | - | chr4_4:5739507-5739526 | None:intergenic | 50.0% |
| CATCTTCTCTACAGGTCTGC+AGG | - | chr4_4:5739552-5739571 | None:intergenic | 50.0% | |
| GACGATGGTGAAGACAACGA+CGG | + | chr4_4:5739652-5739671 | Msa0665860:intron | 50.0% | |
| TGTGAGGAGGAGTTGTGAGA+AGG | + | chr4_4:5739695-5739714 | Msa0665860:intron | 50.0% | |
| CAGTTATGTGGCTCCGTTTC+TGG | + | chr4_4:5740544-5740563 | Msa0665860:intron | 50.0% | |
| TTGTGGCAGGGTTCCAGAAA+CGG | - | chr4_4:5740560-5740579 | None:intergenic | 50.0% | |
| ! | GTTGTGGCCTTGCACTATGA+TGG | + | chr4_4:5740681-5740700 | Msa0665860:intron | 50.0% |
| CACACAATTGCTTCCTCCTC+CGG | + | chr4_4:5740923-5740942 | Msa0665860:intron | 50.0% | |
| ACACAATTGCTTCCTCCTCC+GGG | + | chr4_4:5740924-5740943 | Msa0665860:intron | 50.0% | |
| AGAGCTCTACAATGGAGTGG+TGG | + | chr4_4:5743015-5743034 | Msa0665860:intron | 50.0% | |
| CTGACATAAGAGGAAAGGGG+AGG | - | chr4_4:5743164-5743183 | None:intergenic | 50.0% | |
| CCCACTTCCCATACTTGGTA+AGG | + | chr4_4:5743519-5743538 | Msa0665860:intron | 50.0% | |
| TGGTCAGAGAGAGCTGTTCT+AGG | - | chr4_4:5744109-5744128 | None:intergenic | 50.0% | |
| ! | GATGCTGCTTGCTTTACAGG+TGG | + | chr4_4:5744172-5744191 | Msa0665860:intron | 50.0% |
| CAGGTGGTTTATCTGGATGG+GGG | + | chr4_4:5744188-5744207 | Msa0665860:intron | 50.0% | |
| TGGTTTATCTGGATGGGGGA+TGG | + | chr4_4:5744192-5744211 | Msa0665860:CDS | 50.0% | |
| ACACAATTGCCTCCTCCTCC+AGG | + | chr4_4:5735277-5735296 | Msa0665860:intron | 55.0% | |
| GCCACCTTCTCATAACCTGG+AGG | - | chr4_4:5735295-5735314 | None:intergenic | 55.0% | |
| CGTGCCACCTTCTCATAACC+TGG | - | chr4_4:5735298-5735317 | None:intergenic | 55.0% | |
| GGGAGGGTTTCTCTCTGGTT+AGG | - | chr4_4:5736081-5736100 | None:intergenic | 55.0% | |
| TGGTTGGGAGGGTTTCTCTC+TGG | - | chr4_4:5736086-5736105 | None:intergenic | 55.0% | |
| !! | TCAGTGTTGGCGGAAGCACT+TGG | + | chr4_4:5737173-5737192 | Msa0665860:CDS | 55.0% |
| !! | CAGTGTTGGCGGAAGCACTT+GGG | + | chr4_4:5737174-5737193 | Msa0665860:CDS | 55.0% |
| !! | AGTGTTGGCGGAAGCACTTG+GGG | + | chr4_4:5737175-5737194 | Msa0665860:CDS | 55.0% |
| !! | CGGAAGCACTTGGGGTTAGT+AGG | + | chr4_4:5737183-5737202 | Msa0665860:intron | 55.0% |
| AGGTTATCTGCAGTCGTGGG+TGG | + | chr4_4:5738579-5738598 | Msa0665860:intron | 55.0% | |
| !! | ATTGATGGTGGTGGGGACGA+TGG | + | chr4_4:5739637-5739656 | Msa0665860:intron | 55.0% |
| GATGGTGAAGACAACGACGG+AGG | + | chr4_4:5739655-5739674 | Msa0665860:intron | 55.0% | |
| ACAACGACGGAGGAGGACAA+TGG | + | chr4_4:5739665-5739684 | Msa0665860:intron | 55.0% | |
| !! | GGACAATGGTGGTGGTTGTG+AGG | + | chr4_4:5739679-5739698 | Msa0665860:intron | 55.0% |
| !! | CAATGGTGGTGGTTGTGAGG+AGG | + | chr4_4:5739682-5739701 | Msa0665860:intron | 55.0% |
| GCAGCGCTCAGATGAGTTCA+CGG | + | chr4_4:5740109-5740128 | Msa0665860:intron | 55.0% | |
| TCGTCGGGGAGAATTGCAGA+CGG | - | chr4_4:5740168-5740187 | None:intergenic | 55.0% | |
| !! | GTTTCTGGAACCCTGCCACA+AGG | + | chr4_4:5740559-5740578 | Msa0665860:intron | 55.0% |
| GTCAACCTCCTAGCCGCAAA+AGG | - | chr4_4:5740771-5740790 | None:intergenic | 55.0% | |
| ACATTCTCATAGCCCGGAGG+AGG | - | chr4_4:5740939-5740958 | None:intergenic | 55.0% | |
| TCCTCCGGGCTATGAGAATG+TGG | + | chr4_4:5740938-5740957 | Msa0665860:intron | 55.0% | |
| CGTGCCACATTCTCATAGCC+CGG | - | chr4_4:5740945-5740964 | None:intergenic | 55.0% | |
| !! | CAGTGTTGGCGGAAGCACTT+GGG | + | chr4_4:5737174-5737193 | Msa0665860:CDS | 55.0% |
| !! | GCGGAAGCACTTGGGTTAGA+TGG | + | chr4_4:5744289-5744308 | Msa0665860:CDS | 55.0% |
| TAGGATCTCGCGACCGTGAC+TGG | + | chr4_4:5739411-5739430 | Msa0665860:intron | 60.0% | |
| GAGAAGGCCATGGCCGACAA+CGG | + | chr4_4:5739591-5739610 | Msa0665860:intron | 60.0% | |
| GGTGAAGACAACGACGGAGG+AGG | + | chr4_4:5739658-5739677 | Msa0665860:intron | 60.0% | |
| ACGACGGAGGAGGACAATGG+TGG | + | chr4_4:5739668-5739687 | Msa0665860:intron | 60.0% | |
| ACGGAGGAGGACAATGGTGG+TGG | + | chr4_4:5739671-5739690 | Msa0665860:intron | 60.0% | |
| AGACGGCGGCGGTGATGATT+TGG | - | chr4_4:5740151-5740170 | None:intergenic | 60.0% | |
| TCGGGGAGAATTGCAGACGG+CGG | - | chr4_4:5740165-5740184 | None:intergenic | 60.0% | |
| GCCACATTCTCATAGCCCGG+AGG | - | chr4_4:5740942-5740961 | None:intergenic | 60.0% | |
| CCAAGTGCTTCCGCCAACAC+TGG | - | chr4_4:5737176-5737195 | None:intergenic | 60.0% | |
| !! | CCAGTGTTGGCGGAAGCACT+TGG | + | chr4_4:5744280-5744299 | Msa0665860:CDS | 60.0% |
| CATGGCCGACAACGGCGTGA+GGG | + | chr4_4:5739599-5739618 | Msa0665860:intron | 65.0% | |
| CTGCTCCCTCACGCCGTTGT+CGG | - | chr4_4:5739607-5739626 | None:intergenic | 65.0% | |
| GGGAGAATTGCAGACGGCGG+CGG | - | chr4_4:5740162-5740181 | None:intergenic | 65.0% | |
| CCTCACGCCGTTGTCGGCCA+TGG | - | chr4_4:5739601-5739620 | None:intergenic | 70.0% | |
| CCATGGCCGACAACGGCGTG+AGG | + | chr4_4:5739598-5739617 | Msa0665860:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 5735166 | 5744442 | 5735166 | ID=Msa0665860;Name=Msa0665860 |
| chr4_4 | mRNA | 5735166 | 5744442 | 5735166 | ID=Msa0665860-mRNA-1;Parent=Msa0665860;Name=Msa0665860-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0.33|0.66|0|0|3|106|118 |
| chr4_4 | exon | 5735166 | 5735172 | 5735166 | ID=Msa0665860-mRNA-1:exon:1778;Parent=Msa0665860-mRNA-1 |
| chr4_4 | exon | 5736997 | 5737200 | 5736997 | ID=Msa0665860-mRNA-1:exon:1779;Parent=Msa0665860-mRNA-1 |
| chr4_4 | exon | 5744191 | 5744442 | 5744191 | ID=Msa0665860-mRNA-1:exon:1780;Parent=Msa0665860-mRNA-1 |
| chr4_4 | CDS | 5735166 | 5735172 | 5735166 | ID=Msa0665860-mRNA-1:cds;Parent=Msa0665860-mRNA-1 |
| chr4_4 | CDS | 5736997 | 5737200 | 5736997 | ID=Msa0665860-mRNA-1:cds;Parent=Msa0665860-mRNA-1 |
| chr4_4 | CDS | 5744191 | 5744336 | 5744191 | ID=Msa0665860-mRNA-1:cds;Parent=Msa0665860-mRNA-1 |
| chr4_4 | three_prime_UTR | 5744337 | 5744442 | 5744337 | ID=Msa0665860-mRNA-1:three_prime_utr;Parent=Msa0665860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
