Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795370 | XP_003611121.1 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 1.20e-128 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795370 | sp|P93788|REMO_SOLTU | 48.691 | 191 | 92 | 4 | 20 | 207 | 11 | 198 | 3.41e-48 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795370 | G7KDE4 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.74e-129 | 371 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002710 | Msa0795370 | 0.801329 | 9.480817e-49 | -8.615850e-47 |
| Msa0027890 | Msa0795370 | 0.800569 | 1.355350e-48 | -8.615850e-47 |
| Msa0031180 | Msa0795370 | 0.805869 | 1.083839e-49 | -8.615850e-47 |
| Msa0032470 | Msa0795370 | 0.805737 | 1.155583e-49 | -8.615850e-47 |
| Msa0040620 | Msa0795370 | 0.802127 | 6.502300e-49 | -8.615850e-47 |
| Msa0050820 | Msa0795370 | 0.805019 | 1.634043e-49 | -8.615850e-47 |
| Msa0056450 | Msa0795370 | 0.802369 | 5.797380e-49 | -8.615850e-47 |
| Msa0058310 | Msa0795370 | 0.801294 | 9.635633e-49 | -8.615850e-47 |
| Msa0059890 | Msa0795370 | 0.807061 | 6.074202e-50 | -8.615850e-47 |
| Msa0065680 | Msa0795370 | -0.810674 | 1.024733e-50 | -8.615850e-47 |
| Msa0071250 | Msa0795370 | 0.813182 | 2.913886e-51 | -8.615850e-47 |
| Msa0078480 | Msa0795370 | 0.805057 | 1.604205e-49 | -8.615850e-47 |
| Msa0079130 | Msa0795370 | 0.820916 | 5.326506e-53 | -8.615850e-47 |
| Msa0081650 | Msa0795370 | 0.802418 | 5.664061e-49 | -8.615850e-47 |
| Msa0085370 | Msa0795370 | 0.801969 | 7.006989e-49 | -8.615850e-47 |
| Msa0104670 | Msa0795370 | 0.820583 | 6.351918e-53 | -8.615850e-47 |
| Msa0104800 | Msa0795370 | 0.811059 | 8.458605e-51 | -8.615850e-47 |
| Msa0106620 | Msa0795370 | 0.816605 | 5.074156e-52 | -8.615850e-47 |
| Msa0106710 | Msa0795370 | 0.834419 | 3.029506e-56 | -8.615850e-47 |
| Msa0641730 | Msa0795370 | 0.805787 | 1.127583e-49 | -8.615850e-47 |
| Msa0673270 | Msa0795370 | 0.823680 | 1.215540e-53 | -8.615850e-47 |
| Msa0696080 | Msa0795370 | 0.808445 | 3.085757e-50 | -8.615850e-47 |
| Msa0698290 | Msa0795370 | 0.811662 | 6.259180e-51 | -8.615850e-47 |
| Msa0704920 | Msa0795370 | 0.818964 | 1.488839e-52 | -8.615850e-47 |
| Msa0709160 | Msa0795370 | 0.809868 | 1.529277e-50 | -8.615850e-47 |
| Msa0711100 | Msa0795370 | 0.810336 | 1.212838e-50 | -8.615850e-47 |
| Msa0721280 | Msa0795370 | 0.910323 | 2.129624e-82 | -8.615850e-47 |
| Msa0738030 | Msa0795370 | 0.810751 | 9.862283e-51 | -8.615850e-47 |
| Msa0753370 | Msa0795370 | 0.862731 | 4.117308e-64 | -8.615850e-47 |
| Msa0753990 | Msa0795370 | -0.803717 | 3.051643e-49 | -8.615850e-47 |
| Msa0763890 | Msa0795370 | 0.822964 | 1.787137e-53 | -8.615850e-47 |
| Msa0763920 | Msa0795370 | 0.828103 | 1.082713e-54 | -8.615850e-47 |
| Msa0795070 | Msa0795370 | 0.800462 | 1.425320e-48 | -8.615850e-47 |
| Msa0795360 | Msa0795370 | 0.902047 | 1.445056e-78 | -8.615850e-47 |
| Msa0795370 | Msa0817460 | 0.852221 | 5.323326e-61 | -8.615850e-47 |
| Msa0795370 | Msa0832150 | 0.815060 | 1.121986e-51 | -8.615850e-47 |
| Msa0795370 | Msa0832340 | 0.800227 | 1.590780e-48 | -8.615850e-47 |
| Msa0795370 | Msa0832600 | 0.852387 | 4.772807e-61 | -8.615850e-47 |
| Msa0795370 | Msa0844110 | 0.815463 | 9.125322e-52 | -8.615850e-47 |
| Msa0795370 | Msa0861540 | 0.812032 | 5.199259e-51 | -8.615850e-47 |
| Msa0795370 | Msa0878220 | 0.810400 | 1.174491e-50 | -8.615850e-47 |
| Msa0795370 | Msa0878510 | 0.813977 | 1.947352e-51 | -8.615850e-47 |
| Msa0795370 | Msa0890550 | 0.806567 | 7.726656e-50 | -8.615850e-47 |
| Msa0795370 | Msa0894710 | 0.803576 | 3.264402e-49 | -8.615850e-47 |
| Msa0795370 | Msa0897200 | 0.817124 | 3.880076e-52 | -8.615850e-47 |
| Msa0795370 | Msa0902830 | 0.804391 | 2.209216e-49 | -8.615850e-47 |
| Msa0795370 | Msa0923780 | 0.812692 | 3.730281e-51 | -8.615850e-47 |
| Msa0795370 | Msa0933760 | 0.844365 | 7.907218e-59 | -8.615850e-47 |
| Msa0795370 | Msa0934140 | 0.840067 | 1.086809e-57 | -8.615850e-47 |
| Msa0795370 | Msa0936390 | 0.800543 | 1.371819e-48 | -8.615850e-47 |
| Msa0795370 | Msa0944200 | 0.805733 | 1.157720e-49 | -8.615850e-47 |
| Msa0795370 | Msa0958030 | 0.811117 | 8.218069e-51 | -8.615850e-47 |
| Msa0795370 | Msa0960390 | 0.815718 | 8.007539e-52 | -8.615850e-47 |
| Msa0795370 | Msa0962840 | 0.843343 | 1.485242e-58 | -8.615850e-47 |
| Msa0795370 | Msa0964310 | 0.815200 | 1.044190e-51 | -8.615850e-47 |
| Msa0795370 | Msa0971650 | 0.818159 | 2.267514e-52 | -8.615850e-47 |
| Msa0795370 | Msa0980540 | 0.810525 | 1.103628e-50 | -8.615850e-47 |
| Msa0795370 | Msa0980880 | 0.805090 | 1.578447e-49 | -8.615850e-47 |
| Msa0795370 | Msa0986510 | 0.819794 | 9.630445e-53 | -8.615850e-47 |
| Msa0795370 | Msa0990580 | 0.828000 | 1.146210e-54 | -8.615850e-47 |
| Msa0795370 | Msa0992580 | 0.829550 | 4.833952e-55 | -8.615850e-47 |
| Msa0795370 | Msa0992600 | 0.821070 | 4.908550e-53 | -8.615850e-47 |
| Msa0795370 | Msa1001390 | 0.803934 | 2.750455e-49 | -8.615850e-47 |
| Msa0795370 | Msa1002850 | 0.840668 | 7.571634e-58 | -8.615850e-47 |
| Msa0795370 | Msa1024680 | 0.813393 | 2.618149e-51 | -8.615850e-47 |
| Msa0795370 | Msa1031930 | 0.812961 | 3.257739e-51 | -8.615850e-47 |
| Msa0795370 | Msa1034500 | 0.829942 | 3.880942e-55 | -8.615850e-47 |
| Msa0795370 | Msa1036610 | 0.841439 | 4.749454e-58 | -8.615850e-47 |
| Msa0795370 | Msa1037520 | 0.807952 | 3.930997e-50 | -8.615850e-47 |
| Msa0795370 | Msa1063420 | 0.828862 | 7.100170e-55 | -8.615850e-47 |
| Msa0795370 | Msa1079430 | 0.814011 | 1.914250e-51 | -8.615850e-47 |
| Msa0795370 | Msa1094190 | 0.817829 | 2.692029e-52 | -8.615850e-47 |
| Msa0795370 | Msa1097820 | 0.803447 | 3.470378e-49 | -8.615850e-47 |
| Msa0795370 | Msa1113800 | 0.801747 | 7.779837e-49 | -8.615850e-47 |
| Msa0795370 | Msa1163730 | 0.825294 | 5.070933e-54 | -8.615850e-47 |
| Msa0795370 | Msa1188600 | -0.810381 | 1.185888e-50 | -8.615850e-47 |
| Msa0795370 | Msa1208220 | 0.806701 | 7.239305e-50 | -8.615850e-47 |
| Msa0795370 | Msa1226270 | 0.814790 | 1.287290e-51 | -8.615850e-47 |
| Msa0795370 | Msa1227150 | 0.804552 | 2.044729e-49 | -8.615850e-47 |
| Msa0795370 | Msa1242580 | -0.805552 | 1.263501e-49 | -8.615850e-47 |
| Msa0795370 | Msa1258170 | 0.815028 | 1.140275e-51 | -8.615850e-47 |
| Msa0795370 | Msa1258980 | 0.804316 | 2.290549e-49 | -8.615850e-47 |
| Msa0795370 | Msa1270660 | 0.819804 | 9.580056e-53 | -8.615850e-47 |
| Msa0795370 | Msa1271130 | 0.814924 | 1.202168e-51 | -8.615850e-47 |
| Msa0795370 | Msa1276150 | 0.801073 | 1.069639e-48 | -8.615850e-47 |
| Msa0795370 | Msa1330630 | 0.809182 | 2.146689e-50 | -8.615850e-47 |
| Msa0795370 | Msa1340200 | 0.819487 | 1.131818e-52 | -8.615850e-47 |
| Msa0795370 | Msa1346840 | 0.809964 | 1.458751e-50 | -8.615850e-47 |
| Msa0795370 | Msa1353470 | 0.817153 | 3.822362e-52 | -8.615850e-47 |
| Msa0795370 | Msa1357340 | 0.807141 | 5.842924e-50 | -8.615850e-47 |
| Msa0795370 | Msa1357890 | 0.909371 | 6.130480e-82 | -8.615850e-47 |
| Msa0795370 | Msa1358070 | 0.852883 | 3.446674e-61 | -8.615850e-47 |
| Msa0795370 | Msa1368430 | 0.804830 | 1.789546e-49 | -8.615850e-47 |
| Msa0795370 | Msa1370590 | 0.805505 | 1.292200e-49 | -8.615850e-47 |
| Msa0795370 | Msa1372150 | 0.801739 | 7.812865e-49 | -8.615850e-47 |
| Msa0795370 | Msa1383230 | 0.810234 | 1.275900e-50 | -8.615850e-47 |
| Msa0795370 | Msa1384100 | 0.806767 | 7.009680e-50 | -8.615850e-47 |
| Msa0795370 | Msa1385890 | 0.827578 | 1.448063e-54 | -8.615850e-47 |
| Msa0795370 | Msa1393840 | -0.802076 | 6.658899e-49 | -8.615850e-47 |
| Msa0795370 | Msa1398090 | 0.901806 | 1.845212e-78 | -8.615850e-47 |
| Msa0795370 | Msa1407190 | 0.813116 | 3.012193e-51 | -8.615850e-47 |
| Msa0795370 | Msa1432130 | 0.814074 | 1.853901e-51 | -8.615850e-47 |
| Msa0795370 | Msa1442790 | 0.800437 | 1.442027e-48 | -8.615850e-47 |
| Msa0795370 | Msa1444120 | 0.808841 | 2.540715e-50 | -8.615850e-47 |
| Msa0795370 | Msa1444510 | 0.818284 | 2.124493e-52 | -8.615850e-47 |
| Msa0795370 | Msa1445390 | -0.810916 | 9.086103e-51 | -8.615850e-47 |
| Msa0795370 | Msa1458610 | 0.802869 | 4.572415e-49 | -8.615850e-47 |
| Msa0795370 | Msa1462290 | 0.814614 | 1.408782e-51 | -8.615850e-47 |
| Msa0795370 | Msa1463900 | 0.838523 | 2.734163e-57 | -8.615850e-47 |
| Msa0795370 | Msa1466540 | 0.800259 | 1.567007e-48 | -8.615850e-47 |
| Msa0126790 | Msa0795370 | 0.808060 | 3.727836e-50 | -8.615850e-47 |
| Msa0136120 | Msa0795370 | 0.801355 | 9.364790e-49 | -8.615850e-47 |
| Msa0138500 | Msa0795370 | 0.800353 | 1.499622e-48 | -8.615850e-47 |
| Msa0138520 | Msa0795370 | 0.808706 | 2.714583e-50 | -8.615850e-47 |
| Msa0138640 | Msa0795370 | 0.804181 | 2.443737e-49 | -8.615850e-47 |
| Msa0140500 | Msa0795370 | -0.809600 | 1.746089e-50 | -8.615850e-47 |
| Msa0143850 | Msa0795370 | 0.810315 | 1.225184e-50 | -8.615850e-47 |
| Msa0150860 | Msa0795370 | 0.815956 | 7.088573e-52 | -8.615850e-47 |
| Msa0171870 | Msa0795370 | 0.813289 | 2.760443e-51 | -8.615850e-47 |
| Msa0178510 | Msa0795370 | 0.806924 | 6.493161e-50 | -8.615850e-47 |
| Msa0189930 | Msa0795370 | -0.802852 | 4.607998e-49 | -8.615850e-47 |
| Msa0204960 | Msa0795370 | 0.839939 | 1.173714e-57 | -8.615850e-47 |
| Msa0205010 | Msa0795370 | 0.812934 | 3.302281e-51 | -8.615850e-47 |
| Msa0207030 | Msa0795370 | 0.800892 | 1.164673e-48 | -8.615850e-47 |
| Msa0212040 | Msa0795370 | 0.809707 | 1.656745e-50 | -8.615850e-47 |
| Msa0218810 | Msa0795370 | 0.806578 | 7.685718e-50 | -8.615850e-47 |
| Msa0220730 | Msa0795370 | 0.800151 | 1.648880e-48 | -8.615850e-47 |
| Msa0225220 | Msa0795370 | 0.833819 | 4.284242e-56 | -8.615850e-47 |
| Msa0365100 | Msa0795370 | 0.829053 | 6.384711e-55 | -8.615850e-47 |
| Msa0366210 | Msa0795370 | 0.846473 | 2.124428e-59 | -8.615850e-47 |
| Msa0367870 | Msa0795370 | 0.805701 | 1.175560e-49 | -8.615850e-47 |
| Msa0376630 | Msa0795370 | 0.801592 | 8.372885e-49 | -8.615850e-47 |
| Msa0381610 | Msa0795370 | -0.808823 | 2.562324e-50 | -8.615850e-47 |
| Msa0389910 | Msa0795370 | 0.811236 | 7.745998e-51 | -8.615850e-47 |
| Msa0395980 | Msa0795370 | 0.818932 | 1.514372e-52 | -8.615850e-47 |
| Msa0401560 | Msa0795370 | 0.817665 | 2.930822e-52 | -8.615850e-47 |
| Msa0406770 | Msa0795370 | 0.804810 | 1.806304e-49 | -8.615850e-47 |
| Msa0411410 | Msa0795370 | 0.811457 | 6.935812e-51 | -8.615850e-47 |
| Msa0414140 | Msa0795370 | 0.814189 | 1.748494e-51 | -8.615850e-47 |
| Msa0419720 | Msa0795370 | 0.811387 | 7.181905e-51 | -8.615850e-47 |
| Msa0427040 | Msa0795370 | 0.801065 | 1.073173e-48 | -8.615850e-47 |
| Msa0427100 | Msa0795370 | 0.815274 | 1.005465e-51 | -8.615850e-47 |
| Msa0427120 | Msa0795370 | 0.824877 | 6.361542e-54 | -8.615850e-47 |
| Msa0432500 | Msa0795370 | 0.802083 | 6.638846e-49 | -8.615850e-47 |
| Msa0440510 | Msa0795370 | 0.813456 | 2.536935e-51 | -8.615850e-47 |
| Msa0443000 | Msa0795370 | 0.820333 | 7.249889e-53 | -8.615850e-47 |
| Msa0450400 | Msa0795370 | -0.818460 | 1.938038e-52 | -8.615850e-47 |
| Msa0452710 | Msa0795370 | 0.817351 | 3.449065e-52 | -8.615850e-47 |
| Msa0455740 | Msa0795370 | 0.802261 | 6.102450e-49 | -8.615850e-47 |
| Msa0473500 | Msa0795370 | 0.808367 | 3.207338e-50 | -8.615850e-47 |
| Msa0482040 | Msa0795370 | 0.812344 | 4.444747e-51 | -8.615850e-47 |
| Msa0241140 | Msa0795370 | 0.851822 | 6.908905e-61 | -8.615850e-47 |
| Msa0244970 | Msa0795370 | 0.800051 | 1.727401e-48 | -8.615850e-47 |
| Msa0244980 | Msa0795370 | 0.819455 | 1.151255e-52 | -8.615850e-47 |
| Msa0249310 | Msa0795370 | 0.801743 | 7.797780e-49 | -8.615850e-47 |
| Msa0263920 | Msa0795370 | 0.801311 | 9.560870e-49 | -8.615850e-47 |
| Msa0267920 | Msa0795370 | 0.814308 | 1.646166e-51 | -8.615850e-47 |
| Msa0281530 | Msa0795370 | 0.804868 | 1.756631e-49 | -8.615850e-47 |
| Msa0283420 | Msa0795370 | 0.830936 | 2.217083e-55 | -8.615850e-47 |
| Msa0287790 | Msa0795370 | 0.803439 | 3.484465e-49 | -8.615850e-47 |
| Msa0296790 | Msa0795370 | 0.812337 | 4.460433e-51 | -8.615850e-47 |
| Msa0307960 | Msa0795370 | 0.801946 | 7.082184e-49 | -8.615850e-47 |
| Msa0321690 | Msa0795370 | 0.838480 | 2.805451e-57 | -8.615850e-47 |
| Msa0335800 | Msa0795370 | 0.819553 | 1.093300e-52 | -8.615850e-47 |
| Msa0339910 | Msa0795370 | 0.805098 | 1.572525e-49 | -8.615850e-47 |
| Msa0342010 | Msa0795370 | 0.837080 | 6.417891e-57 | -8.615850e-47 |
| Msa0346700 | Msa0795370 | 0.842608 | 2.330498e-58 | -8.615850e-47 |
| Msa0348530 | Msa0795370 | 0.811217 | 7.817352e-51 | -8.615850e-47 |
| Msa0360210 | Msa0795370 | 0.809320 | 2.006156e-50 | -8.615850e-47 |
| Msa0363810 | Msa0795370 | 0.811518 | 6.724713e-51 | -8.615850e-47 |
| Msa0482940 | Msa0795370 | 0.806696 | 7.257189e-50 | -8.615850e-47 |
| Msa0489660 | Msa0795370 | 0.817040 | 4.052205e-52 | -8.615850e-47 |
| Msa0491000 | Msa0795370 | 0.817106 | 3.916181e-52 | -8.615850e-47 |
| Msa0506830 | Msa0795370 | 0.827433 | 1.568875e-54 | -8.615850e-47 |
| Msa0517640 | Msa0795370 | 0.807753 | 4.333264e-50 | -8.615850e-47 |
| Msa0558370 | Msa0795370 | 0.805520 | 1.282911e-49 | -8.615850e-47 |
| Msa0566350 | Msa0795370 | 0.815650 | 8.292673e-52 | -8.615850e-47 |
| Msa0566750 | Msa0795370 | 0.808777 | 2.621661e-50 | -8.615850e-47 |
| Msa0574390 | Msa0795370 | 0.811128 | 8.173768e-51 | -8.615850e-47 |
| Msa0576680 | Msa0795370 | 0.812115 | 4.985963e-51 | -8.615850e-47 |
| Msa0588090 | Msa0795370 | 0.812865 | 3.418903e-51 | -8.615850e-47 |
| Msa0600080 | Msa0795370 | 0.840237 | 9.810975e-58 | -8.615850e-47 |
| Msa0601950 | Msa0795370 | 0.817024 | 4.085788e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795370 | MtrunA17_Chr5g0397781 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 1.11e-132 | 371 |
| Msa0795370 | MtrunA17_Chr8g0386521 | 48.309 | 207 | 90 | 3 | 10 | 209 | 4 | 200 | 5.68e-56 | 176 |
| Msa0795370 | MtrunA17_Chr1g0203401 | 57.937 | 126 | 53 | 0 | 82 | 207 | 84 | 209 | 2.91e-45 | 149 |
| Msa0795370 | MtrunA17_Chr8g0349271 | 59.524 | 126 | 51 | 0 | 82 | 207 | 75 | 200 | 4.04e-44 | 146 |
| Msa0795370 | MtrunA17_Chr7g0247121 | 50.769 | 65 | 32 | 0 | 143 | 207 | 34 | 98 | 1.15e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0795370 | AT5G23750.3 | 60.317 | 126 | 50 | 0 | 82 | 207 | 104 | 229 | 5.06e-49 | 160 |
| Msa0795370 | AT5G23750.2 | 60.317 | 126 | 50 | 0 | 82 | 207 | 76 | 201 | 7.26e-49 | 158 |
| Msa0795370 | AT5G23750.1 | 60.317 | 126 | 50 | 0 | 82 | 207 | 77 | 202 | 9.92e-49 | 158 |
| Msa0795370 | AT3G48940.1 | 57.937 | 126 | 53 | 0 | 82 | 207 | 50 | 175 | 1.73e-44 | 146 |
| Msa0795370 | AT3G61260.1 | 56.154 | 130 | 57 | 0 | 78 | 207 | 83 | 212 | 8.77e-44 | 145 |
| Msa0795370 | AT2G45820.1 | 58.519 | 135 | 56 | 0 | 73 | 207 | 56 | 190 | 4.19e-40 | 135 |
| Msa0795370 | AT1G63295.1 | 40.625 | 128 | 73 | 2 | 83 | 207 | 24 | 151 | 7.73e-21 | 85.1 |
| Msa0795370 | AT1G63295.2 | 43.243 | 111 | 63 | 0 | 83 | 193 | 64 | 174 | 2.21e-20 | 85.1 |
| Msa0795370 | AT4G00670.1 | 37.963 | 108 | 66 | 1 | 101 | 207 | 16 | 123 | 1.54e-17 | 75.9 |
Find 45 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAGTTCTTCTTCTTATT+TGG | 0.151302 | 5_3:+7302902 | None:intergenic |
| AGCAATCTTCTGTTGGATTA+TGG | 0.203365 | 5_3:-7303504 | Msa0795370:CDS |
| AAGCATGCAAACAATTTCTT+TGG | 0.279239 | 5_3:+7302946 | None:intergenic |
| AGGGGATCATGATGATAAAA+AGG | 0.323089 | 5_3:-7303815 | Msa0795370:CDS |
| GCAATCTTCTGTTGGATTAT+GGG | 0.326593 | 5_3:-7303503 | Msa0795370:CDS |
| AAAAGACAAAGGCAGAAAAT+AGG | 0.344478 | 5_3:-7303617 | Msa0795370:intron |
| GTTGAAATGGCCAGCTGATT+AGG | 0.351901 | 5_3:+7304579 | None:intergenic |
| AGATGATCATGCTGGTAATA+AGG | 0.356783 | 5_3:-7303842 | Msa0795370:CDS |
| CATGCTGGTAATAAGGAAAC+AGG | 0.363454 | 5_3:-7303835 | Msa0795370:CDS |
| GGGGAAAGCTCTTCAGGAAC+AGG | 0.393746 | 5_3:+7304654 | None:intergenic |
| GCTTTCCCCTGTTGTGGAAA+AGG | 0.394410 | 5_3:-7304640 | Msa0795370:CDS |
| CTGATCATCAAGTGTTGAAA+TGG | 0.399507 | 5_3:+7304566 | None:intergenic |
| ACAACAGGGGAAAGCTCTTC+AGG | 0.423226 | 5_3:+7304648 | None:intergenic |
| TTCTGTTCTGTTATGTTCTG+TGG | 0.423547 | 5_3:+7304749 | None:intergenic |
| ACCACAGCTACAGTCTCTTC+TGG | 0.424564 | 5_3:-7304679 | Msa0795370:CDS |
| TGGCCAGCTGATTAGGCTCC+TGG | 0.459792 | 5_3:+7304586 | None:intergenic |
| TGAAGAGCTTTCCCCTGTTG+TGG | 0.460075 | 5_3:-7304646 | Msa0795370:CDS |
| TACAAGAAGCAATCTTCTGT+TGG | 0.476983 | 5_3:-7303511 | Msa0795370:CDS |
| AAGCAAGAAATCATCTATAG+AGG | 0.477360 | 5_3:-7303476 | Msa0795370:CDS |
| AATTGTAGCAGAGAAAAGAT+TGG | 0.480532 | 5_3:-7303667 | Msa0795370:CDS |
| ATTGGCTTTAATTAAAGCAT+GGG | 0.513985 | 5_3:-7303649 | Msa0795370:CDS |
| GATTGGCTTTAATTAAAGCA+TGG | 0.523135 | 5_3:-7303650 | Msa0795370:CDS |
| ATGTTATTGATTATGAAATG+TGG | 0.536366 | 5_3:+7302798 | None:intergenic |
| CAGCCAGGAGCCTAATCAGC+TGG | 0.541152 | 5_3:-7304589 | Msa0795370:CDS |
| AGGCTCCTGGCTGATACTGA+TGG | 0.554814 | 5_3:+7304599 | None:intergenic |
| GGCACAACTCAAGAAATTTG+AGG | 0.555597 | 5_3:-7303455 | Msa0795370:intron |
| TAACAGAACAGAACAAGTCA+TGG | 0.567812 | 5_3:-7304739 | Msa0795370:exon |
| CTGAAAACTTAGTTATGACA+AGG | 0.584476 | 5_3:+7304790 | None:intergenic |
| AACTTAGTTATGACAAGGGT+AGG | 0.585109 | 5_3:+7304795 | None:intergenic |
| GGAAGAATGTCTGGAGCTAG+AGG | 0.585162 | 5_3:-7303004 | Msa0795370:CDS |
| AAGCACCATCAGTATCAGCC+AGG | 0.590861 | 5_3:-7304604 | Msa0795370:CDS |
| ATTTCTTTGGTGCAACTCCA+CGG | 0.591194 | 5_3:+7302959 | None:intergenic |
| GCTGCAAAGTTTCGTAGCCG+TGG | 0.595886 | 5_3:-7302976 | Msa0795370:CDS |
| ATCTTCTGTTGGATTATGGG+AGG | 0.596122 | 5_3:-7303500 | Msa0795370:CDS |
| GAGGTTGCAGATGATCATGC+TGG | 0.615505 | 5_3:-7303850 | Msa0795370:CDS |
| AACAGAACAGAACAAGTCAT+GGG | 0.617130 | 5_3:-7304738 | Msa0795370:exon |
| CAAGTCATGGGAGAATCAGA+AGG | 0.618923 | 5_3:-7304726 | Msa0795370:exon |
| TCCAGAAGAGACTGTAGCTG+TGG | 0.625821 | 5_3:+7304678 | None:intergenic |
| ATGCTGGTAATAAGGAAACA+GGG | 0.632785 | 5_3:-7303834 | Msa0795370:CDS |
| TGCTGGTAATAAGGAAACAG+GGG | 0.640080 | 5_3:-7303833 | Msa0795370:CDS |
| GGAAGAAAGTGAAAAGACAA+AGG | 0.645779 | 5_3:-7303628 | Msa0795370:CDS |
| GGGAAAGCTCTTCAGGAACA+GGG | 0.646598 | 5_3:+7304655 | None:intergenic |
| TTAGTTATGACAAGGGTAGG+TGG | 0.647579 | 5_3:+7304798 | None:intergenic |
| GCTAAGGGCTCAACTGACAG+AGG | 0.669431 | 5_3:-7303790 | Msa0795370:intron |
| TGAAAACTTAGTTATGACAA+GGG | 0.676390 | 5_3:+7304791 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATTAGTTATTATTTA+TGG | - | chr5_3:7304155-7304174 | Msa0795370:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | - | chr5_3:7304451-7304470 | Msa0795370:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | - | chr5_3:7304460-7304479 | Msa0795370:intron | 10.0% |
| !! | TGATTATTAGTTATTATTTA+TGG | - | chr5_3:7304155-7304174 | Msa0795370:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | - | chr5_3:7304451-7304470 | Msa0795370:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | - | chr5_3:7304460-7304479 | Msa0795370:intron | 10.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | - | chr5_3:7303557-7303576 | Msa0795370:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | + | chr5_3:7304002-7304021 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | + | chr5_3:7304003-7304022 | None:intergenic | 15.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | - | chr5_3:7303557-7303576 | Msa0795370:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | + | chr5_3:7304002-7304021 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | + | chr5_3:7304003-7304022 | None:intergenic | 15.0% |
| !! | TTTAAACCTCCAAATATATT+AGG | + | chr5_3:7303396-7303415 | None:intergenic | 20.0% |
| !!! | GTTAATATGGAAATTTTTTG+AGG | - | chr5_3:7303570-7303589 | Msa0795370:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | + | chr5_3:7303607-7303626 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTTGTAAATT+AGG | - | chr5_3:7304194-7304213 | Msa0795370:intron | 20.0% |
| !! | GTAATATTGATGAATAAAGA+AGG | + | chr5_3:7304387-7304406 | None:intergenic | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | + | chr5_3:7304438-7304457 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | + | chr5_3:7304439-7304458 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | - | chr5_3:7304727-7304746 | Msa0795370:exon | 20.0% |
| !!! | ATGTTATTGATTATGAAATG+TGG | + | chr5_3:7304792-7304811 | None:intergenic | 20.0% |
| !! | TTTAAACCTCCAAATATATT+AGG | + | chr5_3:7303396-7303415 | None:intergenic | 20.0% |
| !!! | GTTAATATGGAAATTTTTTG+AGG | - | chr5_3:7303570-7303589 | Msa0795370:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | + | chr5_3:7303607-7303626 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTTGTAAATT+AGG | - | chr5_3:7304194-7304213 | Msa0795370:intron | 20.0% |
| !! | GTAATATTGATGAATAAAGA+AGG | + | chr5_3:7304387-7304406 | None:intergenic | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | + | chr5_3:7304438-7304457 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | + | chr5_3:7304439-7304458 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | - | chr5_3:7304727-7304746 | Msa0795370:exon | 20.0% |
| !!! | ATGTTATTGATTATGAAATG+TGG | + | chr5_3:7304792-7304811 | None:intergenic | 20.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | + | chr5_3:7302799-7302818 | None:intergenic | 25.0% |
| !!! | TCTCTTTATTTACTGTCTTT+TGG | - | chr5_3:7303061-7303080 | Msa0795370:CDS | 25.0% |
| !! | CTAACTTGTCTAAATTCTTA+AGG | - | chr5_3:7303354-7303373 | Msa0795370:intron | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | + | chr5_3:7303487-7303506 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | - | chr5_3:7303484-7303503 | Msa0795370:CDS | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | + | chr5_3:7303510-7303529 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | - | chr5_3:7303718-7303737 | Msa0795370:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | - | chr5_3:7303938-7303957 | Msa0795370:intron | 25.0% |
| !!! | ATGAATAAAGAAGGTATTGT+GGG | + | chr5_3:7304378-7304397 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | - | chr5_3:7304562-7304581 | Msa0795370:intron | 25.0% |
| ! | ATTCAGTTCTTCTTCTTATT+TGG | + | chr5_3:7304688-7304707 | None:intergenic | 25.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | + | chr5_3:7302799-7302818 | None:intergenic | 25.0% |
| !!! | TCTCTTTATTTACTGTCTTT+TGG | - | chr5_3:7303061-7303080 | Msa0795370:CDS | 25.0% |
| !! | CTAACTTGTCTAAATTCTTA+AGG | - | chr5_3:7303354-7303373 | Msa0795370:intron | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | + | chr5_3:7303487-7303506 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | - | chr5_3:7303484-7303503 | Msa0795370:CDS | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | + | chr5_3:7303510-7303529 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | - | chr5_3:7303718-7303737 | Msa0795370:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | - | chr5_3:7303938-7303957 | Msa0795370:intron | 25.0% |
| !!! | ATGAATAAAGAAGGTATTGT+GGG | + | chr5_3:7304378-7304397 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | - | chr5_3:7304562-7304581 | Msa0795370:intron | 25.0% |
| ! | ATTCAGTTCTTCTTCTTATT+TGG | + | chr5_3:7304688-7304707 | None:intergenic | 25.0% |
| CTGAAAACTTAGTTATGACA+AGG | + | chr5_3:7302800-7302819 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | - | chr5_3:7302798-7302817 | Msa0795370:three_prime_UTR | 30.0% |
| !! | TGATTCATTTTTGTTGATGC+TGG | + | chr5_3:7302889-7302908 | None:intergenic | 30.0% |
| AAATTCTTAAGGTCATTCTC+AGG | - | chr5_3:7303365-7303384 | Msa0795370:intron | 30.0% | |
| AATTCTTAAGGTCATTCTCA+GGG | - | chr5_3:7303366-7303385 | Msa0795370:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | - | chr5_3:7303614-7303633 | Msa0795370:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | - | chr5_3:7303615-7303634 | Msa0795370:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | - | chr5_3:7303781-7303800 | Msa0795370:intron | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | - | chr5_3:7303782-7303801 | Msa0795370:intron | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | - | chr5_3:7303889-7303908 | Msa0795370:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | - | chr5_3:7303920-7303939 | Msa0795370:intron | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | - | chr5_3:7303937-7303956 | Msa0795370:intron | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | - | chr5_3:7303970-7303989 | Msa0795370:intron | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | - | chr5_3:7304111-7304130 | Msa0795370:intron | 30.0% | |
| TCTAGTATAACGAAGGTTTA+GGG | + | chr5_3:7304333-7304352 | None:intergenic | 30.0% | |
| TTCTAGTATAACGAAGGTTT+AGG | + | chr5_3:7304334-7304353 | None:intergenic | 30.0% | |
| !! | GATGAATAAAGAAGGTATTG+TGG | + | chr5_3:7304379-7304398 | None:intergenic | 30.0% |
| CAATAGTTGAAGCTCAAAAA+AGG | - | chr5_3:7304561-7304580 | Msa0795370:intron | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | + | chr5_3:7304644-7304663 | None:intergenic | 30.0% | |
| CTGAAAACTTAGTTATGACA+AGG | + | chr5_3:7302800-7302819 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | - | chr5_3:7302798-7302817 | Msa0795370:three_prime_UTR | 30.0% |
| !! | TGATTCATTTTTGTTGATGC+TGG | + | chr5_3:7302889-7302908 | None:intergenic | 30.0% |
| AAATTCTTAAGGTCATTCTC+AGG | - | chr5_3:7303365-7303384 | Msa0795370:intron | 30.0% | |
| AATTCTTAAGGTCATTCTCA+GGG | - | chr5_3:7303366-7303385 | Msa0795370:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | - | chr5_3:7303614-7303633 | Msa0795370:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | - | chr5_3:7303615-7303634 | Msa0795370:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | - | chr5_3:7303781-7303800 | Msa0795370:intron | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | - | chr5_3:7303782-7303801 | Msa0795370:intron | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | - | chr5_3:7303889-7303908 | Msa0795370:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | - | chr5_3:7303920-7303939 | Msa0795370:intron | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | - | chr5_3:7303937-7303956 | Msa0795370:intron | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | - | chr5_3:7303970-7303989 | Msa0795370:intron | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | - | chr5_3:7304111-7304130 | Msa0795370:intron | 30.0% | |
| TCTAGTATAACGAAGGTTTA+GGG | + | chr5_3:7304333-7304352 | None:intergenic | 30.0% | |
| TTCTAGTATAACGAAGGTTT+AGG | + | chr5_3:7304334-7304353 | None:intergenic | 30.0% | |
| !! | GATGAATAAAGAAGGTATTG+TGG | + | chr5_3:7304379-7304398 | None:intergenic | 30.0% |
| CAATAGTTGAAGCTCAAAAA+AGG | - | chr5_3:7304561-7304580 | Msa0795370:intron | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | + | chr5_3:7304644-7304663 | None:intergenic | 30.0% | |
| AACTTAGTTATGACAAGGGT+AGG | + | chr5_3:7302795-7302814 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+TGG | + | chr5_3:7302841-7302860 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | - | chr5_3:7302848-7302867 | Msa0795370:three_prime_UTR | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | - | chr5_3:7302849-7302868 | Msa0795370:three_prime_UTR | 35.0% | |
| !! | CTGATCATCAAGTGTTGAAA+TGG | + | chr5_3:7303024-7303043 | None:intergenic | 35.0% |
| AGATGATCATGCTGGTAATA+AGG | - | chr5_3:7303745-7303764 | Msa0795370:intron | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | - | chr5_3:7303753-7303772 | Msa0795370:intron | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | - | chr5_3:7303772-7303791 | Msa0795370:intron | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | - | chr5_3:7303888-7303907 | Msa0795370:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | - | chr5_3:7303959-7303978 | Msa0795370:intron | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | - | chr5_3:7304041-7304060 | Msa0795370:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | - | chr5_3:7304076-7304095 | Msa0795370:intron | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | - | chr5_3:7304083-7304102 | Msa0795370:intron | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | - | chr5_3:7304084-7304103 | Msa0795370:intron | 35.0% | |
| GATCTCTTCTAGTATAACGA+AGG | + | chr5_3:7304340-7304359 | None:intergenic | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | - | chr5_3:7304574-7304593 | Msa0795370:CDS | 35.0% | |
| AACTTAGTTATGACAAGGGT+AGG | + | chr5_3:7302795-7302814 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+TGG | + | chr5_3:7302841-7302860 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | - | chr5_3:7302848-7302867 | Msa0795370:three_prime_UTR | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | - | chr5_3:7302849-7302868 | Msa0795370:three_prime_UTR | 35.0% | |
| !! | CTGATCATCAAGTGTTGAAA+TGG | + | chr5_3:7303024-7303043 | None:intergenic | 35.0% |
| AGATGATCATGCTGGTAATA+AGG | - | chr5_3:7303745-7303764 | Msa0795370:intron | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | - | chr5_3:7303753-7303772 | Msa0795370:intron | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | - | chr5_3:7303772-7303791 | Msa0795370:intron | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | - | chr5_3:7303888-7303907 | Msa0795370:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | - | chr5_3:7303959-7303978 | Msa0795370:intron | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | - | chr5_3:7304041-7304060 | Msa0795370:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | - | chr5_3:7304076-7304095 | Msa0795370:intron | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | - | chr5_3:7304083-7304102 | Msa0795370:intron | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | - | chr5_3:7304084-7304103 | Msa0795370:intron | 35.0% | |
| GATCTCTTCTAGTATAACGA+AGG | + | chr5_3:7304340-7304359 | None:intergenic | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | - | chr5_3:7304574-7304593 | Msa0795370:CDS | 35.0% | |
| TTAGTTATGACAAGGGTAGG+TGG | + | chr5_3:7302792-7302811 | None:intergenic | 40.0% | |
| ! | TGATTCCTTTTCCACAACAG+GGG | + | chr5_3:7302955-7302974 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | + | chr5_3:7302956-7302975 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | + | chr5_3:7302957-7302976 | None:intergenic | 40.0% |
| CAGGGACGACCTAATATATT+TGG | - | chr5_3:7303384-7303403 | Msa0795370:intron | 40.0% | |
| GGACGACCTAATATATTTGG+AGG | - | chr5_3:7303387-7303406 | Msa0795370:intron | 40.0% | |
| ! | AAACCTTAACTTGGGTTGCT+TGG | - | chr5_3:7303623-7303642 | Msa0795370:CDS | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | + | chr5_3:7303661-7303680 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | - | chr5_3:7303752-7303771 | Msa0795370:intron | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | - | chr5_3:7303754-7303773 | Msa0795370:intron | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | - | chr5_3:7303975-7303994 | Msa0795370:intron | 40.0% | |
| AAAGATGAAATGGTCACGCA+GGG | - | chr5_3:7304051-7304070 | Msa0795370:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | - | chr5_3:7304087-7304106 | Msa0795370:intron | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | - | chr5_3:7304132-7304151 | Msa0795370:intron | 40.0% | |
| AGAAGAGATCTAAGCACTCT+TGG | - | chr5_3:7304350-7304369 | Msa0795370:intron | 40.0% | |
| GAAGAGATCTAAGCACTCTT+GGG | - | chr5_3:7304351-7304370 | Msa0795370:intron | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | + | chr5_3:7304631-7304650 | None:intergenic | 40.0% |
| TTAGTTATGACAAGGGTAGG+TGG | + | chr5_3:7302792-7302811 | None:intergenic | 40.0% | |
| ! | TGATTCCTTTTCCACAACAG+GGG | + | chr5_3:7302955-7302974 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | + | chr5_3:7302956-7302975 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | + | chr5_3:7302957-7302976 | None:intergenic | 40.0% |
| CAGGGACGACCTAATATATT+TGG | - | chr5_3:7303384-7303403 | Msa0795370:intron | 40.0% | |
| GGACGACCTAATATATTTGG+AGG | - | chr5_3:7303387-7303406 | Msa0795370:intron | 40.0% | |
| ! | AAACCTTAACTTGGGTTGCT+TGG | - | chr5_3:7303623-7303642 | Msa0795370:CDS | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | + | chr5_3:7303661-7303680 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | - | chr5_3:7303752-7303771 | Msa0795370:intron | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | - | chr5_3:7303754-7303773 | Msa0795370:intron | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | - | chr5_3:7303975-7303994 | Msa0795370:intron | 40.0% | |
| AAAGATGAAATGGTCACGCA+GGG | - | chr5_3:7304051-7304070 | Msa0795370:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | - | chr5_3:7304087-7304106 | Msa0795370:intron | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | - | chr5_3:7304132-7304151 | Msa0795370:intron | 40.0% | |
| AGAAGAGATCTAAGCACTCT+TGG | - | chr5_3:7304350-7304369 | Msa0795370:intron | 40.0% | |
| GAAGAGATCTAAGCACTCTT+GGG | - | chr5_3:7304351-7304370 | Msa0795370:intron | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | + | chr5_3:7304631-7304650 | None:intergenic | 40.0% |
| CAAGTCATGGGAGAATCAGA+AGG | - | chr5_3:7302861-7302880 | Msa0795370:three_prime_UTR | 45.0% | |
| GTTGAAATGGCCAGCTGATT+AGG | + | chr5_3:7303011-7303030 | None:intergenic | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | + | chr5_3:7303662-7303681 | None:intergenic | 45.0% | |
| GAAAGATGAAATGGTCACGC+AGG | - | chr5_3:7304050-7304069 | Msa0795370:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | + | chr5_3:7304257-7304276 | None:intergenic | 45.0% | |
| CAAGTCATGGGAGAATCAGA+AGG | - | chr5_3:7302861-7302880 | Msa0795370:three_prime_UTR | 45.0% | |
| GTTGAAATGGCCAGCTGATT+AGG | + | chr5_3:7303011-7303030 | None:intergenic | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | + | chr5_3:7303662-7303681 | None:intergenic | 45.0% | |
| GAAAGATGAAATGGTCACGC+AGG | - | chr5_3:7304050-7304069 | Msa0795370:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | + | chr5_3:7304257-7304276 | None:intergenic | 45.0% | |
| ACCACAGCTACAGTCTCTTC+TGG | - | chr5_3:7302908-7302927 | Msa0795370:three_prime_UTR | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | + | chr5_3:7302912-7302931 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | + | chr5_3:7302935-7302954 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | + | chr5_3:7302942-7302961 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | - | chr5_3:7302941-7302960 | Msa0795370:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | - | chr5_3:7302947-7302966 | Msa0795370:CDS | 50.0% | |
| AAGCACCATCAGTATCAGCC+AGG | - | chr5_3:7302983-7303002 | Msa0795370:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | - | chr5_3:7303737-7303756 | Msa0795370:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | - | chr5_3:7304239-7304258 | Msa0795370:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | - | chr5_3:7304583-7304602 | Msa0795370:CDS | 50.0% |
| TATGACAAGGGTAGGTGGTG+AGG | + | chr5_3:7302787-7302806 | None:intergenic | 50.0% | |
| ACCACAGCTACAGTCTCTTC+TGG | - | chr5_3:7302908-7302927 | Msa0795370:three_prime_UTR | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | + | chr5_3:7302912-7302931 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | + | chr5_3:7302935-7302954 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | + | chr5_3:7302942-7302961 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | - | chr5_3:7302941-7302960 | Msa0795370:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | - | chr5_3:7302947-7302966 | Msa0795370:CDS | 50.0% | |
| AAGCACCATCAGTATCAGCC+AGG | - | chr5_3:7302983-7303002 | Msa0795370:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | - | chr5_3:7303737-7303756 | Msa0795370:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | - | chr5_3:7304239-7304258 | Msa0795370:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | - | chr5_3:7304583-7304602 | Msa0795370:CDS | 50.0% |
| GGGGAAAGCTCTTCAGGAAC+AGG | + | chr5_3:7302936-7302955 | None:intergenic | 55.0% | |
| AGGCTCCTGGCTGATACTGA+TGG | + | chr5_3:7302991-7303010 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | + | chr5_3:7303629-7303648 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+CGG | - | chr5_3:7303630-7303649 | Msa0795370:CDS | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | + | chr5_3:7303657-7303676 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | - | chr5_3:7303797-7303816 | Msa0795370:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | - | chr5_3:7304611-7304630 | Msa0795370:CDS | 55.0% | |
| GGGGAAAGCTCTTCAGGAAC+AGG | + | chr5_3:7302936-7302955 | None:intergenic | 55.0% | |
| AGGCTCCTGGCTGATACTGA+TGG | + | chr5_3:7302991-7303010 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | + | chr5_3:7303629-7303648 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+CGG | - | chr5_3:7303630-7303649 | Msa0795370:CDS | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | + | chr5_3:7303657-7303676 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | - | chr5_3:7303797-7303816 | Msa0795370:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | - | chr5_3:7304611-7304630 | Msa0795370:CDS | 55.0% | |
| CAGCCAGGAGCCTAATCAGC+TGG | - | chr5_3:7302998-7303017 | Msa0795370:CDS | 60.0% | |
| TGGCCAGCTGATTAGGCTCC+TGG | + | chr5_3:7303004-7303023 | None:intergenic | 60.0% | |
| ! | ACTTGGGTTGCTTGGCCCTC+GGG | - | chr5_3:7303631-7303650 | Msa0795370:CDS | 60.0% |
| !! | AGTGATCAGGGTTGGCCCGA+GGG | + | chr5_3:7303649-7303668 | None:intergenic | 60.0% |
| CAGCCAGGAGCCTAATCAGC+TGG | - | chr5_3:7302998-7303017 | Msa0795370:CDS | 60.0% | |
| TGGCCAGCTGATTAGGCTCC+TGG | + | chr5_3:7303004-7303023 | None:intergenic | 60.0% | |
| ! | ACTTGGGTTGCTTGGCCCTC+GGG | - | chr5_3:7303631-7303650 | Msa0795370:CDS | 60.0% |
| !! | AGTGATCAGGGTTGGCCCGA+GGG | + | chr5_3:7303649-7303668 | None:intergenic | 60.0% |
| !! | CAGTGATCAGGGTTGGCCCG+AGG | + | chr5_3:7303650-7303669 | None:intergenic | 65.0% |
| !! | CAGTGATCAGGGTTGGCCCG+AGG | + | chr5_3:7303650-7303669 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 7302786 | 7304823 | 7302786 | ID=Msa0795370;Name=Msa0795370 |
| chr5_3 | mRNA | 7302786 | 7304823 | 7302786 | ID=Msa0795370-mRNA-1;Parent=Msa0795370;Name=Msa0795370-mRNA-1;_AED=0.39;_eAED=0.39;_QI=81|1|1|1|1|1|5|150|209 |
| chr5_3 | exon | 7302786 | 7303136 | 7302786 | ID=Msa0795370-mRNA-1:exon:3043;Parent=Msa0795370-mRNA-1 |
| chr5_3 | exon | 7303456 | 7303537 | 7303456 | ID=Msa0795370-mRNA-1:exon:3042;Parent=Msa0795370-mRNA-1 |
| chr5_3 | exon | 7303618 | 7303705 | 7303618 | ID=Msa0795370-mRNA-1:exon:3041;Parent=Msa0795370-mRNA-1 |
| chr5_3 | exon | 7303791 | 7303871 | 7303791 | ID=Msa0795370-mRNA-1:exon:3040;Parent=Msa0795370-mRNA-1 |
| chr5_3 | exon | 7304565 | 7304823 | 7304565 | ID=Msa0795370-mRNA-1:exon:3039;Parent=Msa0795370-mRNA-1 |
| chr5_3 | five_prime_UTR | 7304743 | 7304823 | 7304743 | ID=Msa0795370-mRNA-1:five_prime_utr;Parent=Msa0795370-mRNA-1 |
| chr5_3 | CDS | 7304565 | 7304742 | 7304565 | ID=Msa0795370-mRNA-1:cds;Parent=Msa0795370-mRNA-1 |
| chr5_3 | CDS | 7303791 | 7303871 | 7303791 | ID=Msa0795370-mRNA-1:cds;Parent=Msa0795370-mRNA-1 |
| chr5_3 | CDS | 7303618 | 7303705 | 7303618 | ID=Msa0795370-mRNA-1:cds;Parent=Msa0795370-mRNA-1 |
| chr5_3 | CDS | 7303456 | 7303537 | 7303456 | ID=Msa0795370-mRNA-1:cds;Parent=Msa0795370-mRNA-1 |
| chr5_3 | CDS | 7302936 | 7303136 | 7302936 | ID=Msa0795370-mRNA-1:cds;Parent=Msa0795370-mRNA-1 |
| chr5_3 | three_prime_UTR | 7302786 | 7302935 | 7302786 | ID=Msa0795370-mRNA-1:three_prime_utr;Parent=Msa0795370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
