Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940580 | A0A072U7Y1 | 98.744 | 398 | 5 | 0 | 5 | 402 | 1 | 398 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0940580 | 0.824786 | 6.682432e-54 | -8.615850e-47 |
| Msa0014570 | Msa0940580 | 0.821052 | 4.956837e-53 | -8.615850e-47 |
| Msa0027820 | Msa0940580 | 0.801508 | 8.710288e-49 | -8.615850e-47 |
| Msa0028930 | Msa0940580 | 0.800175 | 1.630364e-48 | -8.615850e-47 |
| Msa0032920 | Msa0940580 | -0.804315 | 2.290947e-49 | -8.615850e-47 |
| Msa0051020 | Msa0940580 | 0.829992 | 3.773829e-55 | -8.615850e-47 |
| Msa0052680 | Msa0940580 | 0.810181 | 1.309457e-50 | -8.615850e-47 |
| Msa0052730 | Msa0940580 | 0.802004 | 6.889860e-49 | -8.615850e-47 |
| Msa0061340 | Msa0940580 | 0.823618 | 1.257363e-53 | -8.615850e-47 |
| Msa0072720 | Msa0940580 | 0.803560 | 3.288715e-49 | -8.615850e-47 |
| Msa0079110 | Msa0940580 | 0.834076 | 3.693961e-56 | -8.615850e-47 |
| Msa0081520 | Msa0940580 | 0.820175 | 7.880875e-53 | -8.615850e-47 |
| Msa0084380 | Msa0940580 | 0.805121 | 1.555284e-49 | -8.615850e-47 |
| Msa0089750 | Msa0940580 | 0.801106 | 1.052678e-48 | -8.615850e-47 |
| Msa0093850 | Msa0940580 | 0.810336 | 1.212512e-50 | -8.615850e-47 |
| Msa0101270 | Msa0940580 | 0.830120 | 3.510939e-55 | -8.615850e-47 |
| Msa0106620 | Msa0940580 | 0.822012 | 2.973708e-53 | -8.615850e-47 |
| Msa0106710 | Msa0940580 | 0.825839 | 3.765334e-54 | -8.615850e-47 |
| Msa0108390 | Msa0940580 | 0.810635 | 1.045274e-50 | -8.615850e-47 |
| Msa0108410 | Msa0940580 | 0.833510 | 5.116534e-56 | -8.615850e-47 |
| Msa0624470 | Msa0940580 | 0.805180 | 1.511610e-49 | -8.615850e-47 |
| Msa0625720 | Msa0940580 | 0.807886 | 4.059251e-50 | -8.615850e-47 |
| Msa0626450 | Msa0940580 | 0.813765 | 2.169292e-51 | -8.615850e-47 |
| Msa0626490 | Msa0940580 | 0.812956 | 3.264959e-51 | -8.615850e-47 |
| Msa0626510 | Msa0940580 | 0.801127 | 1.042412e-48 | -8.615850e-47 |
| Msa0638480 | Msa0940580 | 0.803591 | 3.239917e-49 | -8.615850e-47 |
| Msa0663390 | Msa0940580 | 0.811518 | 6.725139e-51 | -8.615850e-47 |
| Msa0664600 | Msa0940580 | 0.816450 | 5.495738e-52 | -8.615850e-47 |
| Msa0697160 | Msa0940580 | 0.804348 | 2.255265e-49 | -8.615850e-47 |
| Msa0698290 | Msa0940580 | 0.806340 | 8.624513e-50 | -8.615850e-47 |
| Msa0707250 | Msa0940580 | 0.819329 | 1.229791e-52 | -8.615850e-47 |
| Msa0711430 | Msa0940580 | 0.823699 | 1.203675e-53 | -8.615850e-47 |
| Msa0721280 | Msa0940580 | 0.817086 | 3.956446e-52 | -8.615850e-47 |
| Msa0727640 | Msa0940580 | 0.820045 | 8.441234e-53 | -8.615850e-47 |
| Msa0736960 | Msa0940580 | 0.816127 | 6.491790e-52 | -8.615850e-47 |
| Msa0760180 | Msa0940580 | 0.800998 | 1.107967e-48 | -8.615850e-47 |
| Msa0760250 | Msa0940580 | 0.807538 | 4.814185e-50 | -8.615850e-47 |
| Msa0768990 | Msa0940580 | 0.800531 | 1.379692e-48 | -8.615850e-47 |
| Msa0780270 | Msa0940580 | 0.801407 | 9.134900e-49 | -8.615850e-47 |
| Msa0784480 | Msa0940580 | 0.815816 | 7.614213e-52 | -8.615850e-47 |
| Msa0795070 | Msa0940580 | 0.809697 | 1.665029e-50 | -8.615850e-47 |
| Msa0811130 | Msa0940580 | 0.800630 | 1.317106e-48 | -8.615850e-47 |
| Msa0817460 | Msa0940580 | 0.814991 | 1.161980e-51 | -8.615850e-47 |
| Msa0822500 | Msa0940580 | 0.804634 | 1.966384e-49 | -8.615850e-47 |
| Msa0828560 | Msa0940580 | 0.813211 | 2.871479e-51 | -8.615850e-47 |
| Msa0832120 | Msa0940580 | 0.821235 | 4.498401e-53 | -8.615850e-47 |
| Msa0832340 | Msa0940580 | 0.800660 | 1.298650e-48 | -8.615850e-47 |
| Msa0833530 | Msa0940580 | 0.804406 | 2.193938e-49 | -8.615850e-47 |
| Msa0131330 | Msa0940580 | 0.831926 | 1.265471e-55 | -8.615850e-47 |
| Msa0140500 | Msa0940580 | -0.808515 | 2.982076e-50 | -8.615850e-47 |
| Msa0144360 | Msa0940580 | 0.806071 | 9.828007e-50 | -8.615850e-47 |
| Msa0145580 | Msa0940580 | 0.818551 | 1.847965e-52 | -8.615850e-47 |
| Msa0152400 | Msa0940580 | 0.818550 | 1.848582e-52 | -8.615850e-47 |
| Msa0154440 | Msa0940580 | 0.827137 | 1.846891e-54 | -8.615850e-47 |
| Msa0173890 | Msa0940580 | 0.813257 | 2.804961e-51 | -8.615850e-47 |
| Msa0174450 | Msa0940580 | 0.815296 | 9.940455e-52 | -8.615850e-47 |
| Msa0187030 | Msa0940580 | 0.812259 | 4.639537e-51 | -8.615850e-47 |
| Msa0189040 | Msa0940580 | 0.823286 | 1.502952e-53 | -8.615850e-47 |
| Msa0204960 | Msa0940580 | 0.802521 | 5.394468e-49 | -8.615850e-47 |
| Msa0205010 | Msa0940580 | 0.805128 | 1.550216e-49 | -8.615850e-47 |
| Msa0207350 | Msa0940580 | 0.814261 | 1.685884e-51 | -8.615850e-47 |
| Msa0211150 | Msa0940580 | 0.827903 | 1.209877e-54 | -8.615850e-47 |
| Msa0212990 | Msa0940580 | 0.826423 | 2.734743e-54 | -8.615850e-47 |
| Msa0214550 | Msa0940580 | 0.806760 | 7.034123e-50 | -8.615850e-47 |
| Msa0217700 | Msa0940580 | 0.813249 | 2.815950e-51 | -8.615850e-47 |
| Msa0218810 | Msa0940580 | 0.828129 | 1.067140e-54 | -8.615850e-47 |
| Msa0221000 | Msa0940580 | 0.835628 | 1.502644e-56 | -8.615850e-47 |
| Msa0223230 | Msa0940580 | 0.800965 | 1.125160e-48 | -8.615850e-47 |
| Msa0225100 | Msa0940580 | 0.812754 | 3.616461e-51 | -8.615850e-47 |
| Msa0225220 | Msa0940580 | 0.822403 | 2.413409e-53 | -8.615850e-47 |
| Msa0237210 | Msa0940580 | 0.803860 | 2.849758e-49 | -8.615850e-47 |
| Msa0365100 | Msa0940580 | 0.818448 | 1.949642e-52 | -8.615850e-47 |
| Msa0367870 | Msa0940580 | 0.816384 | 5.686889e-52 | -8.615850e-47 |
| Msa0376630 | Msa0940580 | 0.818280 | 2.128232e-52 | -8.615850e-47 |
| Msa0378720 | Msa0940580 | 0.843512 | 1.339124e-58 | -8.615850e-47 |
| Msa0393440 | Msa0940580 | 0.832530 | 8.971754e-56 | -8.615850e-47 |
| Msa0403640 | Msa0940580 | 0.824552 | 7.587816e-54 | -8.615850e-47 |
| Msa0403660 | Msa0940580 | 0.800292 | 1.542982e-48 | -8.615850e-47 |
| Msa0405130 | Msa0940580 | 0.836687 | 8.085973e-57 | -8.615850e-47 |
| Msa0406770 | Msa0940580 | 0.828129 | 1.067010e-54 | -8.615850e-47 |
| Msa0425170 | Msa0940580 | 0.802244 | 6.151024e-49 | -8.615850e-47 |
| Msa0427100 | Msa0940580 | 0.817023 | 4.089122e-52 | -8.615850e-47 |
| Msa0427120 | Msa0940580 | 0.826405 | 2.762282e-54 | -8.615850e-47 |
| Msa0428920 | Msa0940580 | 0.801468 | 8.879187e-49 | -8.615850e-47 |
| Msa0430750 | Msa0940580 | 0.805351 | 1.391824e-49 | -8.615850e-47 |
| Msa0432160 | Msa0940580 | 0.801840 | 7.445787e-49 | -8.615850e-47 |
| Msa0450400 | Msa0940580 | -0.814310 | 1.644508e-51 | -8.615850e-47 |
| Msa0452710 | Msa0940580 | 0.839879 | 1.217017e-57 | -8.615850e-47 |
| Msa0455760 | Msa0940580 | 0.802824 | 4.669829e-49 | -8.615850e-47 |
| Msa0460590 | Msa0940580 | 0.821058 | 4.939822e-53 | -8.615850e-47 |
| Msa0464680 | Msa0940580 | 0.823278 | 1.509755e-53 | -8.615850e-47 |
| Msa0467490 | Msa0940580 | 0.805778 | 1.132386e-49 | -8.615850e-47 |
| Msa0468410 | Msa0940580 | 0.818193 | 2.227107e-52 | -8.615850e-47 |
| Msa0471670 | Msa0940580 | 0.811544 | 6.639434e-51 | -8.615850e-47 |
| Msa0474730 | Msa0940580 | 0.838050 | 3.620831e-57 | -8.615850e-47 |
| Msa0476680 | Msa0940580 | 0.807736 | 4.369619e-50 | -8.615850e-47 |
| Msa0479170 | Msa0940580 | 0.825244 | 5.211026e-54 | -8.615850e-47 |
| Msa0479200 | Msa0940580 | 0.824047 | 9.975337e-54 | -8.615850e-47 |
| Msa0240900 | Msa0940580 | 0.829840 | 4.109484e-55 | -8.615850e-47 |
| Msa0241140 | Msa0940580 | 0.822881 | 1.868223e-53 | -8.615850e-47 |
| Msa0244640 | Msa0940580 | 0.828943 | 6.785116e-55 | -8.615850e-47 |
| Msa0251710 | Msa0940580 | 0.812646 | 3.817485e-51 | -8.615850e-47 |
| Msa0253290 | Msa0940580 | 0.803414 | 3.526077e-49 | -8.615850e-47 |
| Msa0254790 | Msa0940580 | 0.815075 | 1.112901e-51 | -8.615850e-47 |
| Msa0258310 | Msa0940580 | 0.835091 | 2.052475e-56 | -8.615850e-47 |
| Msa0259210 | Msa0940580 | 0.800485 | 1.409624e-48 | -8.615850e-47 |
| Msa0259430 | Msa0940580 | 0.810875 | 9.272399e-51 | -8.615850e-47 |
| Msa0265850 | Msa0940580 | 0.826265 | 2.982694e-54 | -8.615850e-47 |
| Msa0266180 | Msa0940580 | 0.822790 | 1.962016e-53 | -8.615850e-47 |
| Msa0266500 | Msa0940580 | 0.801995 | 6.920180e-49 | -8.615850e-47 |
| Msa0267920 | Msa0940580 | 0.814918 | 1.205974e-51 | -8.615850e-47 |
| Msa0274980 | Msa0940580 | 0.802739 | 4.863027e-49 | -8.615850e-47 |
| Msa0277450 | Msa0940580 | 0.812907 | 3.346608e-51 | -8.615850e-47 |
| Msa0278570 | Msa0940580 | 0.808068 | 3.712880e-50 | -8.615850e-47 |
| Msa0281430 | Msa0940580 | 0.802513 | 5.414355e-49 | -8.615850e-47 |
| Msa0283330 | Msa0940580 | 0.820008 | 8.605578e-53 | -8.615850e-47 |
| Msa0287740 | Msa0940580 | 0.822008 | 2.980743e-53 | -8.615850e-47 |
| Msa0290720 | Msa0940580 | 0.807585 | 4.703411e-50 | -8.615850e-47 |
| Msa0292120 | Msa0940580 | 0.810240 | 1.271889e-50 | -8.615850e-47 |
| Msa0297790 | Msa0940580 | 0.815704 | 8.067461e-52 | -8.615850e-47 |
| Msa0300270 | Msa0940580 | 0.844258 | 8.448492e-59 | -8.615850e-47 |
| Msa0300320 | Msa0940580 | 0.861417 | 1.041100e-63 | -8.615850e-47 |
| Msa0300690 | Msa0940580 | 0.813279 | 2.773409e-51 | -8.615850e-47 |
| Msa0305610 | Msa0940580 | 0.812841 | 3.459967e-51 | -8.615850e-47 |
| Msa0315690 | Msa0940580 | 0.814009 | 1.915818e-51 | -8.615850e-47 |
| Msa0317970 | Msa0940580 | 0.832305 | 1.019599e-55 | -8.615850e-47 |
| Msa0321620 | Msa0940580 | 0.815264 | 1.010580e-51 | -8.615850e-47 |
| Msa0322900 | Msa0940580 | 0.811896 | 5.567107e-51 | -8.615850e-47 |
| Msa0326480 | Msa0940580 | 0.803014 | 4.266358e-49 | -8.615850e-47 |
| Msa0330340 | Msa0940580 | 0.814396 | 1.574148e-51 | -8.615850e-47 |
| Msa0335800 | Msa0940580 | 0.843263 | 1.560172e-58 | -8.615850e-47 |
| Msa0337700 | Msa0940580 | 0.854715 | 1.023066e-61 | -8.615850e-47 |
| Msa0339500 | Msa0940580 | 0.802072 | 6.672347e-49 | -8.615850e-47 |
| Msa0341690 | Msa0940580 | 0.836423 | 9.440085e-57 | -8.615850e-47 |
| Msa0342010 | Msa0940580 | 0.830278 | 3.213251e-55 | -8.615850e-47 |
| Msa0343850 | Msa0940580 | 0.800272 | 1.557622e-48 | -8.615850e-47 |
| Msa0357990 | Msa0940580 | 0.825067 | 5.737924e-54 | -8.615850e-47 |
| Msa0358890 | Msa0940580 | 0.821571 | 3.761201e-53 | -8.615850e-47 |
| Msa0360210 | Msa0940580 | 0.827736 | 1.326852e-54 | -8.615850e-47 |
| Msa0363790 | Msa0940580 | 0.808940 | 2.419178e-50 | -8.615850e-47 |
| Msa0485240 | Msa0940580 | 0.816754 | 4.697297e-52 | -8.615850e-47 |
| Msa0488790 | Msa0940580 | 0.816532 | 5.269695e-52 | -8.615850e-47 |
| Msa0498450 | Msa0940580 | 0.822480 | 2.316626e-53 | -8.615850e-47 |
| Msa0521010 | Msa0940580 | 0.803493 | 3.395916e-49 | -8.615850e-47 |
| Msa0529890 | Msa0940580 | 0.808099 | 3.657771e-50 | -8.615850e-47 |
| Msa0532960 | Msa0940580 | 0.805600 | 1.234450e-49 | -8.615850e-47 |
| Msa0538910 | Msa0940580 | 0.827516 | 1.498886e-54 | -8.615850e-47 |
| Msa0556010 | Msa0940580 | 0.800425 | 1.450089e-48 | -8.615850e-47 |
| Msa0562570 | Msa0940580 | 0.806009 | 1.012968e-49 | -8.615850e-47 |
| Msa0572840 | Msa0940580 | 0.821319 | 4.301465e-53 | -8.615850e-47 |
| Msa0574390 | Msa0940580 | 0.825351 | 4.915357e-54 | -8.615850e-47 |
| Msa0576680 | Msa0940580 | 0.807927 | 3.979141e-50 | -8.615850e-47 |
| Msa0579660 | Msa0940580 | 0.819501 | 1.123523e-52 | -8.615850e-47 |
| Msa0583360 | Msa0940580 | -0.823612 | 1.261309e-53 | -8.615850e-47 |
| Msa0585560 | Msa0940580 | 0.812209 | 4.756964e-51 | -8.615850e-47 |
| Msa0601540 | Msa0940580 | 0.809924 | 1.487848e-50 | -8.615850e-47 |
| Msa0855870 | Msa0940580 | 0.801533 | 8.607326e-49 | -8.615850e-47 |
| Msa0861510 | Msa0940580 | 0.837994 | 3.741665e-57 | -8.615850e-47 |
| Msa0861530 | Msa0940580 | 0.824886 | 6.329931e-54 | -8.615850e-47 |
| Msa0861600 | Msa0940580 | 0.843403 | 1.431433e-58 | -8.615850e-47 |
| Msa0866520 | Msa0940580 | 0.856184 | 3.820094e-62 | -8.615850e-47 |
| Msa0870610 | Msa0940580 | 0.803013 | 4.267680e-49 | -8.615850e-47 |
| Msa0875290 | Msa0940580 | 0.889016 | 3.530884e-73 | -8.615850e-47 |
| Msa0876190 | Msa0940580 | 0.802349 | 5.852828e-49 | -8.615850e-47 |
| Msa0878510 | Msa0940580 | 0.823323 | 1.473478e-53 | -8.615850e-47 |
| Msa0898750 | Msa0940580 | 0.840481 | 8.470488e-58 | -8.615850e-47 |
| Msa0899980 | Msa0940580 | 0.816025 | 6.838747e-52 | -8.615850e-47 |
| Msa0926470 | Msa0940580 | 0.803348 | 3.638674e-49 | -8.615850e-47 |
| Msa0926890 | Msa0940580 | 0.809882 | 1.518643e-50 | -8.615850e-47 |
| Msa0928130 | Msa0940580 | 0.838416 | 2.912781e-57 | -8.615850e-47 |
| Msa0933760 | Msa0940580 | 0.805546 | 1.266985e-49 | -8.615850e-47 |
| Msa0934140 | Msa0940580 | 0.823539 | 1.311899e-53 | -8.615850e-47 |
| Msa0936380 | Msa0940580 | 0.814868 | 1.237592e-51 | -8.615850e-47 |
| Msa0940580 | Msa0962840 | 0.806119 | 9.602219e-50 | -8.615850e-47 |
| Msa0940580 | Msa0964310 | 0.849983 | 2.277440e-60 | -8.615850e-47 |
| Msa0940580 | Msa0967380 | 0.820994 | 5.110407e-53 | -8.615850e-47 |
| Msa0940580 | Msa0967870 | 0.823229 | 1.549878e-53 | -8.615850e-47 |
| Msa0940580 | Msa0972100 | 0.813744 | 2.191601e-51 | -8.615850e-47 |
| Msa0940580 | Msa0980880 | 0.800920 | 1.148971e-48 | -8.615850e-47 |
| Msa0940580 | Msa0986510 | 0.814525 | 1.473981e-51 | -8.615850e-47 |
| Msa0940580 | Msa0997970 | 0.809188 | 2.140852e-50 | -8.615850e-47 |
| Msa0940580 | Msa0999870 | 0.804271 | 2.340429e-49 | -8.615850e-47 |
| Msa0940580 | Msa1000920 | 0.810813 | 9.562391e-51 | -8.615850e-47 |
| Msa0940580 | Msa1001390 | 0.800553 | 1.365666e-48 | -8.615850e-47 |
| Msa0940580 | Msa1002000 | 0.803331 | 3.669405e-49 | -8.615850e-47 |
| Msa0940580 | Msa1019000 | 0.802712 | 4.926139e-49 | -8.615850e-47 |
| Msa0940580 | Msa1019430 | 0.806416 | 8.312910e-50 | -8.615850e-47 |
| Msa0940580 | Msa1019470 | 0.809362 | 1.964087e-50 | -8.615850e-47 |
| Msa0940580 | Msa1023500 | 0.812749 | 3.624160e-51 | -8.615850e-47 |
| Msa0940580 | Msa1031930 | 0.841744 | 3.945128e-58 | -8.615850e-47 |
| Msa0940580 | Msa1032770 | 0.803796 | 2.938080e-49 | -8.615850e-47 |
| Msa0940580 | Msa1034500 | 0.869803 | 2.353661e-66 | -8.615850e-47 |
| Msa0940580 | Msa1036610 | 0.818121 | 2.312389e-52 | -8.615850e-47 |
| Msa0940580 | Msa1043370 | 0.840068 | 1.085927e-57 | -8.615850e-47 |
| Msa0940580 | Msa1071770 | 0.834642 | 2.663211e-56 | -8.615850e-47 |
| Msa0940580 | Msa1078170 | 0.810792 | 9.666935e-51 | -8.615850e-47 |
| Msa0940580 | Msa1079230 | 0.808266 | 3.370018e-50 | -8.615850e-47 |
| Msa0940580 | Msa1089450 | 0.824453 | 8.006478e-54 | -8.615850e-47 |
| Msa0940580 | Msa1094190 | 0.822528 | 2.257015e-53 | -8.615850e-47 |
| Msa0940580 | Msa1095650 | 0.800930 | 1.143939e-48 | -8.615850e-47 |
| Msa0940580 | Msa1101090 | 0.827299 | 1.688919e-54 | -8.615850e-47 |
| Msa0940580 | Msa1104560 | 0.809293 | 2.032214e-50 | -8.615850e-47 |
| Msa0940580 | Msa1113800 | 0.815955 | 7.089760e-52 | -8.615850e-47 |
| Msa0940580 | Msa1121490 | 0.822259 | 2.606220e-53 | -8.615850e-47 |
| Msa0940580 | Msa1126450 | 0.804156 | 2.472808e-49 | -8.615850e-47 |
| Msa0940580 | Msa1137570 | 0.816703 | 4.822816e-52 | -8.615850e-47 |
| Msa0940580 | Msa1145810 | 0.828636 | 8.053052e-55 | -8.615850e-47 |
| Msa0940580 | Msa1155170 | -0.829974 | 3.811027e-55 | -8.615850e-47 |
| Msa0940580 | Msa1158830 | 0.836961 | 6.883070e-57 | -8.615850e-47 |
| Msa0940580 | Msa1160500 | 0.807417 | 5.106365e-50 | -8.615850e-47 |
| Msa0940580 | Msa1162780 | 0.803146 | 4.006839e-49 | -8.615850e-47 |
| Msa0940580 | Msa1163730 | 0.810634 | 1.045626e-50 | -8.615850e-47 |
| Msa0940580 | Msa1188710 | 0.801869 | 7.344132e-49 | -8.615850e-47 |
| Msa0940580 | Msa1189070 | 0.801109 | 1.051189e-48 | -8.615850e-47 |
| Msa0940580 | Msa1199570 | 0.805487 | 1.303603e-49 | -8.615850e-47 |
| Msa0940580 | Msa1203710 | 0.800489 | 1.407229e-48 | -8.615850e-47 |
| Msa0940580 | Msa1205280 | 0.813124 | 2.999870e-51 | -8.615850e-47 |
| Msa0940580 | Msa1208160 | 0.807434 | 5.063382e-50 | -8.615850e-47 |
| Msa0940580 | Msa1208430 | 0.801789 | 7.629930e-49 | -8.615850e-47 |
| Msa0940580 | Msa1219000 | 0.817910 | 2.580112e-52 | -8.615850e-47 |
| Msa0940580 | Msa1225860 | -0.824422 | 8.142108e-54 | -8.615850e-47 |
| Msa0940580 | Msa1226270 | 0.842871 | 1.983853e-58 | -8.615850e-47 |
| Msa0940580 | Msa1228200 | 0.814683 | 1.359459e-51 | -8.615850e-47 |
| Msa0940580 | Msa1229500 | 0.820188 | 7.828570e-53 | -8.615850e-47 |
| Msa0940580 | Msa1238820 | 0.820174 | 7.884825e-53 | -8.615850e-47 |
| Msa0940580 | Msa1243870 | 0.832433 | 9.482254e-56 | -8.615850e-47 |
| Msa0940580 | Msa1246360 | 0.800338 | 1.510620e-48 | -8.615850e-47 |
| Msa0940580 | Msa1258170 | 0.801900 | 7.238430e-49 | -8.615850e-47 |
| Msa0940580 | Msa1267770 | 0.800422 | 1.452287e-48 | -8.615850e-47 |
| Msa0940580 | Msa1271990 | 0.824434 | 8.088849e-54 | -8.615850e-47 |
| Msa0940580 | Msa1276660 | 0.815511 | 8.906322e-52 | -8.615850e-47 |
| Msa0940580 | Msa1285550 | 0.810818 | 9.541526e-51 | -8.615850e-47 |
| Msa0940580 | Msa1286610 | 0.801507 | 8.717220e-49 | -8.615850e-47 |
| Msa0940580 | Msa1297230 | 0.828876 | 7.046752e-55 | -8.615850e-47 |
| Msa0940580 | Msa1298370 | 0.802799 | 4.725688e-49 | -8.615850e-47 |
| Msa0940580 | Msa1307560 | 0.806906 | 6.550404e-50 | -8.615850e-47 |
| Msa0940580 | Msa1314650 | 0.813570 | 2.394109e-51 | -8.615850e-47 |
| Msa0940580 | Msa1328640 | 0.819062 | 1.414598e-52 | -8.615850e-47 |
| Msa0940580 | Msa1328710 | 0.804638 | 1.962725e-49 | -8.615850e-47 |
| Msa0940580 | Msa1332760 | 0.831705 | 1.434553e-55 | -8.615850e-47 |
| Msa0940580 | Msa1333480 | 0.803642 | 3.161993e-49 | -8.615850e-47 |
| Msa0940580 | Msa1345810 | 0.813604 | 2.352632e-51 | -8.615850e-47 |
| Msa0940580 | Msa1348090 | 0.846770 | 1.763100e-59 | -8.615850e-47 |
| Msa0940580 | Msa1353470 | 0.826315 | 2.902840e-54 | -8.615850e-47 |
| Msa0940580 | Msa1353980 | 0.827164 | 1.820124e-54 | -8.615850e-47 |
| Msa0940580 | Msa1355450 | 0.822259 | 2.606406e-53 | -8.615850e-47 |
| Msa0940580 | Msa1356830 | 0.811860 | 5.667234e-51 | -8.615850e-47 |
| Msa0940580 | Msa1357890 | 0.812582 | 3.942960e-51 | -8.615850e-47 |
| Msa0940580 | Msa1360980 | 0.816100 | 6.581499e-52 | -8.615850e-47 |
| Msa0940580 | Msa1368430 | 0.830018 | 3.719411e-55 | -8.615850e-47 |
| Msa0940580 | Msa1369150 | 0.806304 | 8.777246e-50 | -8.615850e-47 |
| Msa0940580 | Msa1382400 | 0.845850 | 3.138875e-59 | -8.615850e-47 |
| Msa0940580 | Msa1383230 | 0.820918 | 5.320974e-53 | -8.615850e-47 |
| Msa0940580 | Msa1385890 | 0.814135 | 1.797823e-51 | -8.615850e-47 |
| Msa0940580 | Msa1386710 | 0.809861 | 1.534751e-50 | -8.615850e-47 |
| Msa0940580 | Msa1388970 | 0.800707 | 1.270448e-48 | -8.615850e-47 |
| Msa0940580 | Msa1393570 | 0.806279 | 8.885190e-50 | -8.615850e-47 |
| Msa0940580 | Msa1398090 | 0.816382 | 5.690736e-52 | -8.615850e-47 |
| Msa0940580 | Msa1418240 | 0.817714 | 2.857019e-52 | -8.615850e-47 |
| Msa0940580 | Msa1423350 | 0.832359 | 9.889795e-56 | -8.615850e-47 |
| Msa0940580 | Msa1425260 | 0.802649 | 5.075281e-49 | -8.615850e-47 |
| Msa0940580 | Msa1425880 | 0.829704 | 4.435836e-55 | -8.615850e-47 |
| Msa0940580 | Msa1440310 | 0.833376 | 5.524982e-56 | -8.615850e-47 |
| Msa0940580 | Msa1440960 | 0.805957 | 1.038443e-49 | -8.615850e-47 |
| Msa0940580 | Msa1444510 | 0.818314 | 2.091263e-52 | -8.615850e-47 |
| Msa0940580 | Msa1445390 | -0.810947 | 8.947919e-51 | -8.615850e-47 |
| Msa0940580 | Msa1449340 | -0.804701 | 1.903906e-49 | -8.615850e-47 |
| Msa0940580 | Msa1451160 | 0.824093 | 9.727498e-54 | -8.615850e-47 |
| Msa0940580 | Msa1463900 | 0.836730 | 7.885211e-57 | -8.615850e-47 |
| Msa0940580 | Msa1464810 | 0.811361 | 7.274389e-51 | -8.615850e-47 |
| Msa0940580 | Msa1466540 | 0.820473 | 6.734982e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940580 | MtrunA17_Chr6g0456421 | 98.744 | 398 | 5 | 0 | 5 | 402 | 1 | 398 | 0.0 | 818 |
| Msa0940580 | MtrunA17_Chr5g0414371 | 44.472 | 398 | 202 | 8 | 5 | 402 | 1 | 379 | 4.40e-104 | 312 |
| Msa0940580 | MtrunA17_Chr0c01g0489311 | 42.298 | 409 | 215 | 10 | 5 | 402 | 1 | 399 | 2.82e-101 | 306 |
| Msa0940580 | MtrunA17_Chr5g0414421 | 43.137 | 408 | 202 | 10 | 4 | 402 | 30 | 416 | 4.01e-101 | 306 |
| Msa0940580 | MtrunA17_Chr5g0414441 | 42.716 | 405 | 207 | 9 | 5 | 402 | 1 | 387 | 2.76e-99 | 300 |
| Msa0940580 | MtrunA17_Chr5g0414391 | 42.211 | 398 | 213 | 8 | 5 | 402 | 1 | 381 | 1.04e-96 | 294 |
| Msa0940580 | MtrunA17_Chr5g0414461 | 42.680 | 403 | 203 | 12 | 5 | 402 | 1 | 380 | 1.98e-91 | 280 |
| Msa0940580 | MtrunA17_Chr5g0414451 | 45.055 | 91 | 48 | 2 | 121 | 211 | 1 | 89 | 4.32e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940580 | AT1G61600.1 | 47.991 | 423 | 193 | 8 | 5 | 402 | 1 | 421 | 1.32e-119 | 354 |
| Msa0940580 | AT1G13540.1 | 39.163 | 406 | 214 | 10 | 5 | 402 | 1 | 381 | 2.03e-85 | 265 |
| Msa0940580 | AT1G13510.1 | 38.084 | 407 | 216 | 14 | 5 | 402 | 1 | 380 | 2.83e-81 | 254 |
| Msa0940580 | AT1G13520.1 | 37.129 | 404 | 231 | 8 | 5 | 402 | 1 | 387 | 8.95e-80 | 251 |
| Msa0940580 | AT1G13480.1 | 40.295 | 407 | 214 | 14 | 5 | 402 | 1 | 387 | 4.64e-79 | 249 |
| Msa0940580 | AT1G13530.1 | 38.480 | 408 | 218 | 12 | 5 | 402 | 1 | 385 | 1.62e-77 | 245 |
| Msa0940580 | AT1G13470.1 | 41.379 | 406 | 202 | 14 | 5 | 402 | 1 | 378 | 1.60e-76 | 242 |
| Msa0940580 | AT1G13500.1 | 38.929 | 411 | 213 | 15 | 5 | 402 | 1 | 386 | 6.68e-72 | 230 |
| Msa0940580 | AT1G13490.2 | 37.192 | 406 | 223 | 12 | 5 | 402 | 1 | 382 | 1.04e-71 | 230 |
| Msa0940580 | AT1G13490.1 | 36.364 | 407 | 206 | 15 | 5 | 402 | 1 | 363 | 1.02e-64 | 211 |
| Msa0940580 | AT1G13550.1 | 36.496 | 411 | 217 | 14 | 5 | 398 | 1 | 384 | 1.07e-64 | 212 |
Find 77 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATACCCTTAATGTAATT+TGG | 0.153850 | 6_3:-13141688 | None:intergenic |
| GAACAAGGTGGTTGGGTTTA+TGG | 0.163598 | 6_3:+13141460 | Msa0940580:CDS |
| GGATGGAAAGTTAGAATTTC+AGG | 0.176798 | 6_3:+13140974 | Msa0940580:CDS |
| CACCTTTGGTTGTTGGAAAA+TGG | 0.194337 | 6_3:+13141098 | Msa0940580:CDS |
| TCACTCTCCAAATTACATTA+AGG | 0.196540 | 6_3:+13141681 | Msa0940580:three_prime_UTR |
| CTAACCCTTCTCTTATTATA+AGG | 0.226999 | 6_3:-13141391 | None:intergenic |
| ATGGGAGTAAGAATAAATTA+AGG | 0.275137 | 6_3:+13141648 | Msa0940580:exon |
| GAGTATGAATCTTGAAAATT+TGG | 0.287206 | 6_3:-13140880 | None:intergenic |
| AATGGAACAATTGATAATAA+TGG | 0.293530 | 6_3:+13141343 | Msa0940580:CDS |
| CAGAAAATCTCCAAGTAGTT+TGG | 0.309974 | 6_3:+13139165 | Msa0940580:CDS |
| ATGAACAAACTACAAGCATT+AGG | 0.322136 | 6_3:+13139350 | Msa0940580:CDS |
| CACTCTCCAAATTACATTAA+GGG | 0.322739 | 6_3:+13141682 | Msa0940580:three_prime_UTR |
| GTAAGAATAAATTAAGGGTT+TGG | 0.325579 | 6_3:+13141654 | Msa0940580:exon |
| ATACCCTTTGTGTCTGCCTT+TGG | 0.326192 | 6_3:-13139434 | None:intergenic |
| CCACCAGATGCACCATATTC+AGG | 0.356356 | 6_3:+13139196 | Msa0940580:CDS |
| CTCATAAGATCAAGTGCAAA+TGG | 0.359028 | 6_3:+13141629 | Msa0940580:CDS |
| GGTTTGGTTTCTTCCTGTTC+CGG | 0.365715 | 6_3:+13139372 | Msa0940580:CDS |
| GGTGGTTGGGTTTATGGAAA+TGG | 0.381100 | 6_3:+13141466 | Msa0940580:CDS |
| TAGGTTTGGTTGTTATGTTT+TGG | 0.382119 | 6_3:+13141543 | Msa0940580:CDS |
| TGAACAAACTACAAGCATTA+GGG | 0.387201 | 6_3:+13139351 | Msa0940580:CDS |
| TGGGAGTAAGAATAAATTAA+GGG | 0.398106 | 6_3:+13141649 | Msa0940580:exon |
| AATTCACCACCTTTGGTTGT+TGG | 0.398250 | 6_3:+13141091 | Msa0940580:CDS |
| CATGTCAAAATGAATGGAAT+AGG | 0.399945 | 6_3:+13141524 | Msa0940580:CDS |
| AAACTACAAGCATTAGGGTT+TGG | 0.421172 | 6_3:+13139356 | Msa0940580:CDS |
| GGTTGAAGAACAAGGTGGTT+GGG | 0.429590 | 6_3:+13141453 | Msa0940580:CDS |
| ATTACTAGATAGCCTGAATA+TGG | 0.440006 | 6_3:-13139208 | None:intergenic |
| TTTATGGAAATGGGAGAGAA+AGG | 0.450997 | 6_3:+13141476 | Msa0940580:CDS |
| GTGGTTGGGTTTATGGAAAT+GGG | 0.452673 | 6_3:+13141467 | Msa0940580:CDS |
| GTAGTTTGTTCATTCTCTGA+AGG | 0.457736 | 6_3:-13139340 | None:intergenic |
| CAAAATGAATGGAATAGGTT+TGG | 0.471107 | 6_3:+13141529 | Msa0940580:CDS |
| GACAGAGAATGATCCGGAAC+AGG | 0.475966 | 6_3:-13139385 | None:intergenic |
| AACAATTTGTCCTGAGGGAA+AGG | 0.481094 | 6_3:-13139304 | None:intergenic |
| AATATGAAGACACATGTTGT+TGG | 0.482328 | 6_3:+13139248 | Msa0940580:CDS |
| GAGATAGGAAAGTGGAAACT+TGG | 0.487301 | 6_3:-13141061 | None:intergenic |
| TAGCCTGAATATGGTGCATC+TGG | 0.497842 | 6_3:-13139199 | None:intergenic |
| AGGTAACATGTCAAAATGAA+TGG | 0.498649 | 6_3:+13141518 | Msa0940580:CDS |
| GGTGGTATCTCCAAACTACT+TGG | 0.499946 | 6_3:-13139175 | None:intergenic |
| GGAATGGAAGCTACAAAGAA+TGG | 0.501988 | 6_3:+13141325 | Msa0940580:CDS |
| ATCAGAGAGGTGGGCAGACG+TGG | 0.502640 | 6_3:+13141780 | Msa0940580:three_prime_UTR |
| GCAAAATCAATTACACCAGA+TGG | 0.503210 | 6_3:+13140923 | Msa0940580:CDS |
| GAATATGGTGCATCTGGTGG+TGG | 0.505065 | 6_3:-13139193 | None:intergenic |
| AAAAGTATTGATATGTGGAA+TGG | 0.508759 | 6_3:+13141309 | Msa0940580:CDS |
| GGGTTGAAGAACAAGGTGGT+TGG | 0.514868 | 6_3:+13141452 | Msa0940580:CDS |
| AATAAGAGAAGGGTTAGTGT+TGG | 0.514996 | 6_3:+13141397 | Msa0940580:CDS |
| TTGCAAAGAAACCACCACTT+TGG | 0.515923 | 6_3:-13140904 | None:intergenic |
| TTATGGAAATGGGAGAGAAA+GGG | 0.516779 | 6_3:+13141477 | Msa0940580:CDS |
| TTGCTTCGCAAAATTCGCAT+TGG | 0.519536 | 6_3:-13141754 | None:intergenic |
| ATAATCCTTATAATAAGAGA+AGG | 0.528576 | 6_3:+13141386 | Msa0940580:CDS |
| AAGAGATTTATTCATGTGGA+AGG | 0.531674 | 6_3:+13141218 | Msa0940580:CDS |
| TCTGATTACATAGTATCTGT+TGG | 0.539712 | 6_3:-13139410 | None:intergenic |
| TCATAAGATCAAGTGCAAAT+GGG | 0.540678 | 6_3:+13141630 | Msa0940580:CDS |
| CTGAGAACAATTTGTCCTGA+GGG | 0.544154 | 6_3:-13139309 | None:intergenic |
| CAATTATTGATAATATGAGA+TGG | 0.545429 | 6_3:+13141431 | Msa0940580:CDS |
| CATGTTGTTGGCGAATATGT+CGG | 0.547818 | 6_3:+13139260 | Msa0940580:CDS |
| TTGGAAGACAGAGAATGATC+CGG | 0.548425 | 6_3:-13139391 | None:intergenic |
| AAGCAAGAAATCAGAGAGGT+GGG | 0.562702 | 6_3:+13141771 | Msa0940580:three_prime_UTR |
| AATTATTGATAATATGAGAT+GGG | 0.564762 | 6_3:+13141432 | Msa0940580:CDS |
| GAGCCAAAGGCAGACACAAA+GGG | 0.573071 | 6_3:+13139431 | Msa0940580:CDS |
| TAATCCTTATAATAAGAGAA+GGG | 0.577271 | 6_3:+13141387 | Msa0940580:CDS |
| ATGAGATGGGTTGAAGAACA+AGG | 0.578823 | 6_3:+13141445 | Msa0940580:CDS |
| TACTATGTAATCAGAGCCAA+AGG | 0.580889 | 6_3:+13139418 | Msa0940580:CDS |
| AGAGCCAAAGGCAGACACAA+AGG | 0.589081 | 6_3:+13139430 | Msa0940580:CDS |
| TGCAAACTAAATGAAGCTCT+AGG | 0.589377 | 6_3:+13141010 | Msa0940580:CDS |
| GTATACAAATGTTCAAGAGA+AGG | 0.591748 | 6_3:+13140782 | Msa0940580:CDS |
| GAAGAAGCTACCTTTCCCTC+AGG | 0.593364 | 6_3:+13139294 | Msa0940580:CDS |
| TGGGAAGAGATTTATTCATG+TGG | 0.601621 | 6_3:+13141214 | Msa0940580:CDS |
| GAAGCAAGAAATCAGAGAGG+TGG | 0.602383 | 6_3:+13141770 | Msa0940580:three_prime_UTR |
| ACTGAGAACAATTTGTCCTG+AGG | 0.622754 | 6_3:-13139310 | None:intergenic |
| GGTTGTGACAGTGAAAGAAG+AGG | 0.624027 | 6_3:+13141498 | Msa0940580:CDS |
| TTTGTCTTAGGACATTGGAT+GGG | 0.633452 | 6_3:+13141575 | Msa0940580:CDS |
| AAGATTCATACTCACCAAAG+TGG | 0.633707 | 6_3:+13140890 | Msa0940580:CDS |
| ATTCATACTCACCAAAGTGG+TGG | 0.642384 | 6_3:+13140893 | Msa0940580:CDS |
| CCTGAATATGGTGCATCTGG+TGG | 0.656029 | 6_3:-13139196 | None:intergenic |
| ATGTTCAAGAGAAGGTGACA+TGG | 0.658676 | 6_3:+13140790 | Msa0940580:CDS |
| GTTGTTGGCGAATATGTCGG+CGG | 0.731526 | 6_3:+13139263 | Msa0940580:CDS |
| AGATGGGTTGAAGAACAAGG+TGG | 0.752941 | 6_3:+13141448 | Msa0940580:CDS |
| TGCGAAGCAAGAAATCAGAG+AGG | 0.756682 | 6_3:+13141767 | Msa0940580:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATTTGATATATTCA+TGG | + | chr6_3:13139701-13139720 | Msa0940580:intron | 10.0% |
| !!! | ATGTATTAATTTTTTTGCAT+AGG | + | chr6_3:13139459-13139478 | Msa0940580:intron | 15.0% |
| !! | TATAAGCTTATATAAGTATA+CGG | + | chr6_3:13139941-13139960 | Msa0940580:intron | 15.0% |
| !! | TTAAAAAACTTTCATGTTTA+AGG | + | chr6_3:13140037-13140056 | Msa0940580:intron | 15.0% |
| !! | TAAAAAACTTTCATGTTTAA+GGG | + | chr6_3:13140038-13140057 | Msa0940580:intron | 15.0% |
| !!! | CTTTCTTTTACAAATATAAA+TGG | - | chr6_3:13141130-13141149 | None:intergenic | 15.0% |
| !!! | AATTATTGATAATATGAGAT+GGG | + | chr6_3:13141432-13141451 | Msa0940580:CDS | 15.0% |
| !! | AACTCAGTTAATAGATTTAT+TGG | + | chr6_3:13140069-13140088 | Msa0940580:intron | 20.0% |
| !! | TTTGAAAACAATTATGATCA+AGG | + | chr6_3:13140114-13140133 | Msa0940580:intron | 20.0% |
| !!! | AATGGAACAATTGATAATAA+TGG | + | chr6_3:13141343-13141362 | Msa0940580:CDS | 20.0% |
| !!! | ATAATGGTTTTATGTTGTTT+AGG | + | chr6_3:13141359-13141378 | Msa0940580:CDS | 20.0% |
| !!! | TAATGGTTTTATGTTGTTTA+GGG | + | chr6_3:13141360-13141379 | Msa0940580:CDS | 20.0% |
| !! | ATAATCCTTATAATAAGAGA+AGG | + | chr6_3:13141386-13141405 | Msa0940580:CDS | 20.0% |
| !! | TAATCCTTATAATAAGAGAA+GGG | + | chr6_3:13141387-13141406 | Msa0940580:CDS | 20.0% |
| !!! | CAATTATTGATAATATGAGA+TGG | + | chr6_3:13141431-13141450 | Msa0940580:CDS | 20.0% |
| !!! | TTGATTATTGTATCGTTTTT+AGG | + | chr6_3:13141726-13141745 | Msa0940580:three_prime_UTR | 20.0% |
| !!! | ATATGAGTAAACTGTCATTT+TGG | + | chr6_3:13139525-13139544 | Msa0940580:intron | 25.0% |
| ! | CGAAACTTCAAAAATATCTA+TGG | + | chr6_3:13139592-13139611 | Msa0940580:intron | 25.0% |
| ! | CCAAATTATGTAAGCTTATA+AGG | - | chr6_3:13140480-13140499 | None:intergenic | 25.0% |
| ! | CCTTATAAGCTTACATAATT+TGG | + | chr6_3:13140477-13140496 | Msa0940580:intron | 25.0% |
| ! | CTTGGTCATTATAGATTTAT+AGG | + | chr6_3:13140528-13140547 | Msa0940580:intron | 25.0% |
| !! | AAATGTTATTTGACATTGCA+AGG | - | chr6_3:13140688-13140707 | None:intergenic | 25.0% |
| !! | TGAAACTTTTGTGATTTTGT+AGG | + | chr6_3:13140756-13140775 | Msa0940580:intron | 25.0% |
| !! | TACAAGTCTTTTAGATTGAA+TGG | - | chr6_3:13140860-13140879 | None:intergenic | 25.0% |
| ! | GAGTATGAATCTTGAAAATT+TGG | - | chr6_3:13140883-13140902 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTAGGAATTTTGG+TGG | - | chr6_3:13140953-13140972 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTCTTAGGAATTT+TGG | - | chr6_3:13140956-13140975 | None:intergenic | 25.0% |
| ! | CCAAAATTCCTAAGAAAAAA+AGG | + | chr6_3:13140953-13140972 | Msa0940580:CDS | 25.0% |
| ! | AATTCCTAAGAAAAAAAGGA+TGG | + | chr6_3:13140957-13140976 | Msa0940580:CDS | 25.0% |
| !!! | AGAGAAAAAGTATTGATATG+TGG | + | chr6_3:13141304-13141323 | Msa0940580:CDS | 25.0% |
| !!! | AAAAGTATTGATATGTGGAA+TGG | + | chr6_3:13141309-13141328 | Msa0940580:CDS | 25.0% |
| !!! | TAGTCTTGAGATATGATTTT+AGG | + | chr6_3:13141602-13141621 | Msa0940580:CDS | 25.0% |
| ! | ATGGGAGTAAGAATAAATTA+AGG | + | chr6_3:13141648-13141667 | Msa0940580:exon | 25.0% |
| ! | TGGGAGTAAGAATAAATTAA+GGG | + | chr6_3:13141649-13141668 | Msa0940580:exon | 25.0% |
| ! | GTAAGAATAAATTAAGGGTT+TGG | + | chr6_3:13141654-13141673 | Msa0940580:exon | 25.0% |
| ! | AACATACCCTTAATGTAATT+TGG | - | chr6_3:13141691-13141710 | None:intergenic | 25.0% |
| ! | GATTTTCTGTACATAGACAA+AGG | - | chr6_3:13139154-13139173 | None:intergenic | 30.0% |
| ATTACTAGATAGCCTGAATA+TGG | - | chr6_3:13139211-13139230 | None:intergenic | 30.0% | |
| AATATGAAGACACATGTTGT+TGG | + | chr6_3:13139248-13139267 | Msa0940580:CDS | 30.0% | |
| ATGAACAAACTACAAGCATT+AGG | + | chr6_3:13139350-13139369 | Msa0940580:CDS | 30.0% | |
| TGAACAAACTACAAGCATTA+GGG | + | chr6_3:13139351-13139370 | Msa0940580:CDS | 30.0% | |
| TCTGATTACATAGTATCTGT+TGG | - | chr6_3:13139413-13139432 | None:intergenic | 30.0% | |
| TTTGCATAGGTTCATAAGTT+TGG | + | chr6_3:13139472-13139491 | Msa0940580:intron | 30.0% | |
| GATACTTTCAGAGACTATAA+TGG | - | chr6_3:13139573-13139592 | None:intergenic | 30.0% | |
| ! | ATGTCTTTTGCTAGTCAATT+TGG | - | chr6_3:13139678-13139697 | None:intergenic | 30.0% |
| ATGGAAGAATCAAGTTCAAT+TGG | - | chr6_3:13139767-13139786 | None:intergenic | 30.0% | |
| ! | AGTAAGAGTGTATATAAGCA+TGG | - | chr6_3:13139786-13139805 | None:intergenic | 30.0% |
| TTATAGTTCCATACTGACAA+AGG | - | chr6_3:13139876-13139895 | None:intergenic | 30.0% | |
| TGATTTCGTTAAACTCATTG+TGG | + | chr6_3:13140181-13140200 | Msa0940580:intron | 30.0% | |
| ! | AGATGTTATTTGACATTGCA+AGG | - | chr6_3:13140225-13140244 | None:intergenic | 30.0% |
| GTATTGTGTGAATTCTTATC+TGG | - | chr6_3:13140256-13140275 | None:intergenic | 30.0% | |
| ! | TGAAACTTTCGTGATTTTGT+AGG | + | chr6_3:13140287-13140306 | Msa0940580:intron | 30.0% |
| !! | GTATACAAATGTTCTAGAGA+AGG | + | chr6_3:13140313-13140332 | Msa0940580:intron | 30.0% |
| ATTCAAGAATATGTGCCATA+AGG | + | chr6_3:13140342-13140361 | Msa0940580:intron | 30.0% | |
| TAATTGAGCTCATGCTTATA+AGG | + | chr6_3:13140389-13140408 | Msa0940580:intron | 30.0% | |
| !! | GAGATAACTTCTAAGATACT+TGG | + | chr6_3:13140510-13140529 | Msa0940580:intron | 30.0% |
| ! | AGTAAGTGTGAATTTTTACG+AGG | - | chr6_3:13140726-13140745 | None:intergenic | 30.0% |
| GTATACAAATGTTCAAGAGA+AGG | + | chr6_3:13140782-13140801 | Msa0940580:CDS | 30.0% | |
| ! | TCTTTTAGATTGAATGGCTT+TGG | - | chr6_3:13140854-13140873 | None:intergenic | 30.0% |
| !!! | CTTTCCATCCTTTTTTTCTT+AGG | - | chr6_3:13140964-13140983 | None:intergenic | 30.0% |
| ! | TTTTTCTTGAGATAGGAAAG+TGG | - | chr6_3:13141072-13141091 | None:intergenic | 30.0% |
| !!! | GGTGAATTTTTTCTTGAGAT+AGG | - | chr6_3:13141079-13141098 | None:intergenic | 30.0% |
| AAGAAAAAATTCACCACCTT+TGG | + | chr6_3:13141084-13141103 | Msa0940580:CDS | 30.0% | |
| TATGACACTAGAGCAAAAAT+GGG | + | chr6_3:13141195-13141214 | Msa0940580:CDS | 30.0% | |
| AAGAGATTTATTCATGTGGA+AGG | + | chr6_3:13141218-13141237 | Msa0940580:CDS | 30.0% | |
| CTAACCCTTCTCTTATTATA+AGG | - | chr6_3:13141394-13141413 | None:intergenic | 30.0% | |
| AGGTAACATGTCAAAATGAA+TGG | + | chr6_3:13141518-13141537 | Msa0940580:CDS | 30.0% | |
| CATGTCAAAATGAATGGAAT+AGG | + | chr6_3:13141524-13141543 | Msa0940580:CDS | 30.0% | |
| CAAAATGAATGGAATAGGTT+TGG | + | chr6_3:13141529-13141548 | Msa0940580:CDS | 30.0% | |
| !! | TAGGTTTGGTTGTTATGTTT+TGG | + | chr6_3:13141543-13141562 | Msa0940580:CDS | 30.0% |
| ! | TGGTTGAAAGTTTTTGTCTT+AGG | + | chr6_3:13141563-13141582 | Msa0940580:CDS | 30.0% |
| ! | AAGTTTTTGTCTTAGGACAT+TGG | + | chr6_3:13141570-13141589 | Msa0940580:CDS | 30.0% |
| TCATAAGATCAAGTGCAAAT+GGG | + | chr6_3:13141630-13141649 | Msa0940580:CDS | 30.0% | |
| TCACTCTCCAAATTACATTA+AGG | + | chr6_3:13141681-13141700 | Msa0940580:three_prime_UTR | 30.0% | |
| CACTCTCCAAATTACATTAA+GGG | + | chr6_3:13141682-13141701 | Msa0940580:three_prime_UTR | 30.0% | |
| CAGAAAATCTCCAAGTAGTT+TGG | + | chr6_3:13139165-13139184 | Msa0940580:CDS | 35.0% | |
| !! | GTAGTTTGTTCATTCTCTGA+AGG | - | chr6_3:13139343-13139362 | None:intergenic | 35.0% |
| AAACTACAAGCATTAGGGTT+TGG | + | chr6_3:13139356-13139375 | Msa0940580:CDS | 35.0% | |
| TACTATGTAATCAGAGCCAA+AGG | + | chr6_3:13139418-13139437 | Msa0940580:CDS | 35.0% | |
| TTAAGTACCAAGCTGACAAA+CGG | + | chr6_3:13139636-13139655 | Msa0940580:intron | 35.0% | |
| ACTGACAAAGGAAGATCATA+TGG | - | chr6_3:13139864-13139883 | None:intergenic | 35.0% | |
| ATGATCTTCCTTTGTCAGTA+TGG | + | chr6_3:13139865-13139884 | Msa0940580:intron | 35.0% | |
| GCAGACTAAATAAGACCTTA+TGG | - | chr6_3:13140360-13140379 | None:intergenic | 35.0% | |
| !! | AAGGTCTTATTTAGTCTGCA+TGG | + | chr6_3:13140361-13140380 | Msa0940580:intron | 35.0% |
| ATTTACGTGCACGTTTGAAT+TGG | + | chr6_3:13140556-13140575 | Msa0940580:intron | 35.0% | |
| GCGATGTACAATCTTGATTA+AGG | + | chr6_3:13140578-13140597 | Msa0940580:intron | 35.0% | |
| TGATTTCGTCAAACTCATTG+TGG | + | chr6_3:13140644-13140663 | Msa0940580:intron | 35.0% | |
| ! | TTGGACTTTTGTCATTCAAG+AGG | - | chr6_3:13140835-13140854 | None:intergenic | 35.0% |
| AAGATTCATACTCACCAAAG+TGG | + | chr6_3:13140890-13140909 | Msa0940580:CDS | 35.0% | |
| GCAAAATCAATTACACCAGA+TGG | + | chr6_3:13140923-13140942 | Msa0940580:CDS | 35.0% | |
| !! | AATTTTGGTGGAATTCCATC+TGG | - | chr6_3:13140941-13140960 | None:intergenic | 35.0% |
| GGATGGAAAGTTAGAATTTC+AGG | + | chr6_3:13140974-13140993 | Msa0940580:CDS | 35.0% | |
| TGCAAACTAAATGAAGCTCT+AGG | + | chr6_3:13141010-13141029 | Msa0940580:CDS | 35.0% | |
| ! | TACCATTTTCCAACAACCAA+AGG | - | chr6_3:13141103-13141122 | None:intergenic | 35.0% |
| GTATGACACTAGAGCAAAAA+TGG | + | chr6_3:13141194-13141213 | Msa0940580:CDS | 35.0% | |
| TGGGAAGAGATTTATTCATG+TGG | + | chr6_3:13141214-13141233 | Msa0940580:CDS | 35.0% | |
| ! | AATAAGAGAAGGGTTAGTGT+TGG | + | chr6_3:13141397-13141416 | Msa0940580:CDS | 35.0% |
| TTTATGGAAATGGGAGAGAA+AGG | + | chr6_3:13141476-13141495 | Msa0940580:CDS | 35.0% | |
| TTATGGAAATGGGAGAGAAA+GGG | + | chr6_3:13141477-13141496 | Msa0940580:CDS | 35.0% | |
| ! | TTTTGTCTTAGGACATTGGA+TGG | + | chr6_3:13141574-13141593 | Msa0940580:CDS | 35.0% |
| TTTGTCTTAGGACATTGGAT+GGG | + | chr6_3:13141575-13141594 | Msa0940580:CDS | 35.0% | |
| CTCATAAGATCAAGTGCAAA+TGG | + | chr6_3:13141629-13141648 | Msa0940580:CDS | 35.0% | |
| CATGTTGTTGGCGAATATGT+CGG | + | chr6_3:13139260-13139279 | Msa0940580:CDS | 40.0% | |
| AACAATTTGTCCTGAGGGAA+AGG | - | chr6_3:13139307-13139326 | None:intergenic | 40.0% | |
| CTGAGAACAATTTGTCCTGA+GGG | - | chr6_3:13139312-13139331 | None:intergenic | 40.0% | |
| ACTGAGAACAATTTGTCCTG+AGG | - | chr6_3:13139313-13139332 | None:intergenic | 40.0% | |
| TTGGAAGACAGAGAATGATC+CGG | - | chr6_3:13139394-13139413 | None:intergenic | 40.0% | |
| ! | TTTTGGTCCGTAAATGTGTC+AGG | + | chr6_3:13139542-13139561 | Msa0940580:intron | 40.0% |
| ATGTTCAAGAGAAGGTGACA+TGG | + | chr6_3:13140790-13140809 | Msa0940580:CDS | 40.0% | |
| ATTCATACTCACCAAAGTGG+TGG | + | chr6_3:13140893-13140912 | Msa0940580:CDS | 40.0% | |
| TTGCAAAGAAACCACCACTT+TGG | - | chr6_3:13140907-13140926 | None:intergenic | 40.0% | |
| ! | CTTGGAAGCTTTTCTCTTAG+AGG | - | chr6_3:13141046-13141065 | None:intergenic | 40.0% |
| GAGATAGGAAAGTGGAAACT+TGG | - | chr6_3:13141064-13141083 | None:intergenic | 40.0% | |
| AATTCACCACCTTTGGTTGT+TGG | + | chr6_3:13141091-13141110 | Msa0940580:CDS | 40.0% | |
| ! | CATTTTCCAACAACCAAAGG+TGG | - | chr6_3:13141100-13141119 | None:intergenic | 40.0% |
| CACCTTTGGTTGTTGGAAAA+TGG | + | chr6_3:13141098-13141117 | Msa0940580:CDS | 40.0% | |
| GGAATGGAAGCTACAAAGAA+TGG | + | chr6_3:13141325-13141344 | Msa0940580:CDS | 40.0% | |
| !! | ATGAGATGGGTTGAAGAACA+AGG | + | chr6_3:13141445-13141464 | Msa0940580:CDS | 40.0% |
| GTGGTTGGGTTTATGGAAAT+GGG | + | chr6_3:13141467-13141486 | Msa0940580:CDS | 40.0% | |
| TTGCTTCGCAAAATTCGCAT+TGG | - | chr6_3:13141757-13141776 | None:intergenic | 40.0% | |
| AAGCAAGAAATCAGAGAGGT+GGG | + | chr6_3:13141771-13141790 | Msa0940580:three_prime_UTR | 40.0% | |
| GGTGGTATCTCCAAACTACT+TGG | - | chr6_3:13139178-13139197 | None:intergenic | 45.0% | |
| TAGCCTGAATATGGTGCATC+TGG | - | chr6_3:13139202-13139221 | None:intergenic | 45.0% | |
| ! | GGTTTGGTTTCTTCCTGTTC+CGG | + | chr6_3:13139372-13139391 | Msa0940580:CDS | 45.0% |
| ATACCCTTTGTGTCTGCCTT+TGG | - | chr6_3:13139437-13139456 | None:intergenic | 45.0% | |
| GGTACCACCTGACACATTTA+CGG | - | chr6_3:13139552-13139571 | None:intergenic | 45.0% | |
| ATGTCTTCCGTTTGTCAGCT+TGG | - | chr6_3:13139646-13139665 | None:intergenic | 45.0% | |
| CGTCAAACTCATTGTGGTTC+CGG | + | chr6_3:13140650-13140669 | Msa0940580:intron | 45.0% | |
| TGCAAGGTTATGTGCATGTC+CGG | - | chr6_3:13140672-13140691 | None:intergenic | 45.0% | |
| !! | AGATGGGTTGAAGAACAAGG+TGG | + | chr6_3:13141448-13141467 | Msa0940580:CDS | 45.0% |
| GGTTGAAGAACAAGGTGGTT+GGG | + | chr6_3:13141453-13141472 | Msa0940580:CDS | 45.0% | |
| GAACAAGGTGGTTGGGTTTA+TGG | + | chr6_3:13141460-13141479 | Msa0940580:CDS | 45.0% | |
| GGTGGTTGGGTTTATGGAAA+TGG | + | chr6_3:13141466-13141485 | Msa0940580:CDS | 45.0% | |
| GGTTGTGACAGTGAAAGAAG+AGG | + | chr6_3:13141498-13141517 | Msa0940580:CDS | 45.0% | |
| TGCGAAGCAAGAAATCAGAG+AGG | + | chr6_3:13141767-13141786 | Msa0940580:three_prime_UTR | 45.0% | |
| GAAGCAAGAAATCAGAGAGG+TGG | + | chr6_3:13141770-13141789 | Msa0940580:three_prime_UTR | 45.0% | |
| GAATATGGTGCATCTGGTGG+TGG | - | chr6_3:13139196-13139215 | None:intergenic | 50.0% | |
| CCTGAATATGGTGCATCTGG+TGG | - | chr6_3:13139199-13139218 | None:intergenic | 50.0% | |
| CCACCAGATGCACCATATTC+AGG | + | chr6_3:13139196-13139215 | Msa0940580:CDS | 50.0% | |
| GTTGTTGGCGAATATGTCGG+CGG | + | chr6_3:13139263-13139282 | Msa0940580:CDS | 50.0% | |
| GAAGAAGCTACCTTTCCCTC+AGG | + | chr6_3:13139294-13139313 | Msa0940580:CDS | 50.0% | |
| GACAGAGAATGATCCGGAAC+AGG | - | chr6_3:13139388-13139407 | None:intergenic | 50.0% | |
| AGAGCCAAAGGCAGACACAA+AGG | + | chr6_3:13139430-13139449 | Msa0940580:CDS | 50.0% | |
| GAGCCAAAGGCAGACACAAA+GGG | + | chr6_3:13139431-13139450 | Msa0940580:CDS | 50.0% | |
| TGGTCCGTAAATGTGTCAGG+TGG | + | chr6_3:13139545-13139564 | Msa0940580:intron | 50.0% | |
| ACTCATTGTGGTTGCACGCA+TGG | + | chr6_3:13140193-13140212 | Msa0940580:intron | 50.0% | |
| GGGTTGAAGAACAAGGTGGT+TGG | + | chr6_3:13141452-13141471 | Msa0940580:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 13139124 | 13141802 | 13139124 | ID=Msa0940580;Name=Msa0940580 |
| chr6_3 | mRNA | 13139124 | 13141802 | 13139124 | ID=Msa0940580-mRNA-1;Parent=Msa0940580;Name=Msa0940580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|145|402 |
| chr6_3 | exon | 13139124 | 13139452 | 13139124 | ID=Msa0940580-mRNA-1:exon:4251;Parent=Msa0940580-mRNA-1 |
| chr6_3 | exon | 13140778 | 13141802 | 13140778 | ID=Msa0940580-mRNA-1:exon:4252;Parent=Msa0940580-mRNA-1 |
| chr6_3 | CDS | 13139124 | 13139452 | 13139124 | ID=Msa0940580-mRNA-1:cds;Parent=Msa0940580-mRNA-1 |
| chr6_3 | CDS | 13140778 | 13141657 | 13140778 | ID=Msa0940580-mRNA-1:cds;Parent=Msa0940580-mRNA-1 |
| chr6_3 | three_prime_UTR | 13141658 | 13141802 | 13141658 | ID=Msa0940580-mRNA-1:three_prime_utr;Parent=Msa0940580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
