Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538650 | RHN59446.1 | 58.400 | 125 | 45 | 3 | 1 | 125 | 1 | 118 | 2.98e-23 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538650 | A0A396I1F2 | 58.400 | 125 | 45 | 3 | 1 | 125 | 1 | 118 | 1.42e-23 | 98.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012790 | Msa0538650 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa0012810 | Msa0538650 | 0.812243 | 4.676999e-51 | -8.615850e-47 |
| Msa0021400 | Msa0538650 | 0.805927 | 1.053863e-49 | -8.615850e-47 |
| Msa0024650 | Msa0538650 | 0.804275 | 2.335546e-49 | -8.615850e-47 |
| Msa0034100 | Msa0538650 | -0.833821 | 4.278905e-56 | -8.615850e-47 |
| Msa0036550 | Msa0538650 | 0.831869 | 1.307120e-55 | -8.615850e-47 |
| Msa0036560 | Msa0538650 | -0.813701 | 2.240184e-51 | -8.615850e-47 |
| Msa0036580 | Msa0538650 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0038010 | Msa0538650 | 0.830930 | 2.225140e-55 | -8.615850e-47 |
| Msa0046430 | Msa0538650 | 0.821669 | 3.571555e-53 | -8.615850e-47 |
| Msa0048380 | Msa0538650 | 0.803107 | 4.082587e-49 | -8.615850e-47 |
| Msa0048950 | Msa0538650 | 0.814818 | 1.269159e-51 | -8.615850e-47 |
| Msa0059880 | Msa0538650 | 0.821886 | 3.180946e-53 | -8.615850e-47 |
| Msa0061590 | Msa0538650 | 0.805641 | 1.210433e-49 | -8.615850e-47 |
| Msa0064990 | Msa0538650 | 0.828954 | 6.744839e-55 | -8.615850e-47 |
| Msa0072030 | Msa0538650 | 0.800144 | 1.654485e-48 | -8.615850e-47 |
| Msa0080010 | Msa0538650 | 0.803078 | 4.138729e-49 | -8.615850e-47 |
| Msa0081790 | Msa0538650 | -0.809348 | 1.977765e-50 | -8.615850e-47 |
| Msa0084190 | Msa0538650 | 0.815347 | 9.683295e-52 | -8.615850e-47 |
| Msa0084390 | Msa0538650 | 0.829116 | 6.162497e-55 | -8.615850e-47 |
| Msa0085710 | Msa0538650 | 0.824616 | 7.329617e-54 | -8.615850e-47 |
| Msa0087130 | Msa0538650 | -0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0090190 | Msa0538650 | 0.815776 | 7.773823e-52 | -8.615850e-47 |
| Msa0110240 | Msa0538650 | 0.804613 | 1.986030e-49 | -8.615850e-47 |
| Msa0121320 | Msa0538650 | 0.804891 | 1.737497e-49 | -8.615850e-47 |
| Msa0128110 | Msa0538650 | -0.825517 | 4.488968e-54 | -8.615850e-47 |
| Msa0128340 | Msa0538650 | 0.806736 | 7.117088e-50 | -8.615850e-47 |
| Msa0128740 | Msa0538650 | 0.815806 | 7.655015e-52 | -8.615850e-47 |
| Msa0129270 | Msa0538650 | 0.823618 | 1.257054e-53 | -8.615850e-47 |
| Msa0130360 | Msa0538650 | 0.806986 | 6.301365e-50 | -8.615850e-47 |
| Msa0130710 | Msa0538650 | 0.814296 | 1.656286e-51 | -8.615850e-47 |
| Msa0131460 | Msa0538650 | 0.812924 | 3.319243e-51 | -8.615850e-47 |
| Msa0132250 | Msa0538650 | 0.843571 | 1.291038e-58 | -8.615850e-47 |
| Msa0136090 | Msa0538650 | 0.804064 | 2.584827e-49 | -8.615850e-47 |
| Msa0137760 | Msa0538650 | 0.817433 | 3.305657e-52 | -8.615850e-47 |
| Msa0139270 | Msa0538650 | 0.817809 | 2.719180e-52 | -8.615850e-47 |
| Msa0139280 | Msa0538650 | -0.803090 | 4.114623e-49 | -8.615850e-47 |
| Msa0139850 | Msa0538650 | 0.806331 | 8.662335e-50 | -8.615850e-47 |
| Msa0143710 | Msa0538650 | 0.811322 | 7.420530e-51 | -8.615850e-47 |
| Msa0143770 | Msa0538650 | 0.800120 | 1.673025e-48 | -8.615850e-47 |
| Msa0150910 | Msa0538650 | 0.823786 | 1.148390e-53 | -8.615850e-47 |
| Msa0163690 | Msa0538650 | 0.811019 | 8.629587e-51 | -8.615850e-47 |
| Msa0174590 | Msa0538650 | 0.812392 | 4.338722e-51 | -8.615850e-47 |
| Msa0175060 | Msa0538650 | 0.824057 | 9.920411e-54 | -8.615850e-47 |
| Msa0176600 | Msa0538650 | 0.830741 | 2.476064e-55 | -8.615850e-47 |
| Msa0176620 | Msa0538650 | 0.816981 | 4.178603e-52 | -8.615850e-47 |
| Msa0177550 | Msa0538650 | 0.810023 | 1.416362e-50 | -8.615850e-47 |
| Msa0182840 | Msa0538650 | 0.818129 | 2.302756e-52 | -8.615850e-47 |
| Msa0186200 | Msa0538650 | 0.820457 | 6.791122e-53 | -8.615850e-47 |
| Msa0189990 | Msa0538650 | 0.804920 | 1.713083e-49 | -8.615850e-47 |
| Msa0190890 | Msa0538650 | 0.800132 | 1.663814e-48 | -8.615850e-47 |
| Msa0191100 | Msa0538650 | 0.800750 | 1.244969e-48 | -8.615850e-47 |
| Msa0196280 | Msa0538650 | 0.803521 | 3.350271e-49 | -8.615850e-47 |
| Msa0197920 | Msa0538650 | 0.816774 | 4.650224e-52 | -8.615850e-47 |
| Msa0200090 | Msa0538650 | 0.800273 | 1.557086e-48 | -8.615850e-47 |
| Msa0219810 | Msa0538650 | 0.814991 | 1.161791e-51 | -8.615850e-47 |
| Msa0225920 | Msa0538650 | 0.807168 | 5.766387e-50 | -8.615850e-47 |
| Msa0233210 | Msa0538650 | 0.807283 | 5.452732e-50 | -8.615850e-47 |
| Msa0234130 | Msa0538650 | 0.816011 | 6.891010e-52 | -8.615850e-47 |
| Msa0238140 | Msa0538650 | 0.821157 | 4.687017e-53 | -8.615850e-47 |
| Msa0368620 | Msa0538650 | 0.808789 | 2.605668e-50 | -8.615850e-47 |
| Msa0370620 | Msa0538650 | 0.808950 | 2.407267e-50 | -8.615850e-47 |
| Msa0375500 | Msa0538650 | 0.829709 | 4.423318e-55 | -8.615850e-47 |
| Msa0375550 | Msa0538650 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0389570 | Msa0538650 | -0.815040 | 1.133293e-51 | -8.615850e-47 |
| Msa0389710 | Msa0538650 | 0.807637 | 4.585863e-50 | -8.615850e-47 |
| Msa0424300 | Msa0538650 | 0.848853 | 4.704460e-60 | -8.615850e-47 |
| Msa0425950 | Msa0538650 | 0.807855 | 4.121607e-50 | -8.615850e-47 |
| Msa0426030 | Msa0538650 | 0.810717 | 1.003122e-50 | -8.615850e-47 |
| Msa0444210 | Msa0538650 | 0.811625 | 6.375524e-51 | -8.615850e-47 |
| Msa0464620 | Msa0538650 | 0.808047 | 3.751294e-50 | -8.615850e-47 |
| Msa0471210 | Msa0538650 | 0.848432 | 6.152923e-60 | -8.615850e-47 |
| Msa0480260 | Msa0538650 | 0.808691 | 2.734782e-50 | -8.615850e-47 |
| Msa0247780 | Msa0538650 | 0.819626 | 1.052062e-52 | -8.615850e-47 |
| Msa0258010 | Msa0538650 | 0.800134 | 1.661527e-48 | -8.615850e-47 |
| Msa0259110 | Msa0538650 | 0.804631 | 1.968821e-49 | -8.615850e-47 |
| Msa0259300 | Msa0538650 | 0.806034 | 1.000765e-49 | -8.615850e-47 |
| Msa0266640 | Msa0538650 | 0.802896 | 4.513252e-49 | -8.615850e-47 |
| Msa0275570 | Msa0538650 | 0.825201 | 5.333897e-54 | -8.615850e-47 |
| Msa0277320 | Msa0538650 | 0.829500 | 4.972744e-55 | -8.615850e-47 |
| Msa0298270 | Msa0538650 | 0.804910 | 1.721835e-49 | -8.615850e-47 |
| Msa0311540 | Msa0538650 | 0.800161 | 1.641006e-48 | -8.615850e-47 |
| Msa0317300 | Msa0538650 | 0.823258 | 1.526032e-53 | -8.615850e-47 |
| Msa0318360 | Msa0538650 | 0.801663 | 8.098229e-49 | -8.615850e-47 |
| Msa0323090 | Msa0538650 | 0.815397 | 9.442913e-52 | -8.615850e-47 |
| Msa0325260 | Msa0538650 | 0.811728 | 6.054421e-51 | -8.615850e-47 |
| Msa0333770 | Msa0538650 | 0.802035 | 6.789556e-49 | -8.615850e-47 |
| Msa0336640 | Msa0538650 | 0.800621 | 1.322338e-48 | -8.615850e-47 |
| Msa0349910 | Msa0538650 | 0.807045 | 6.122513e-50 | -8.615850e-47 |
| Msa0357470 | Msa0538650 | 0.801452 | 8.946004e-49 | -8.615850e-47 |
| Msa0483090 | Msa0538650 | -0.802301 | 5.988057e-49 | -8.615850e-47 |
| Msa0491760 | Msa0538650 | 0.820432 | 6.881050e-53 | -8.615850e-47 |
| Msa0491770 | Msa0538650 | 0.810220 | 1.284581e-50 | -8.615850e-47 |
| Msa0508160 | Msa0538650 | 0.802903 | 4.498992e-49 | -8.615850e-47 |
| Msa0515930 | Msa0538650 | 0.848656 | 5.333356e-60 | -8.615850e-47 |
| Msa0527560 | Msa0538650 | 0.821420 | 4.075624e-53 | -8.615850e-47 |
| Msa0529360 | Msa0538650 | 0.820711 | 5.936278e-53 | -8.615850e-47 |
| Msa0538450 | Msa0538650 | 0.818614 | 1.788286e-52 | -8.615850e-47 |
| Msa0538520 | Msa0538650 | 0.822163 | 2.744213e-53 | -8.615850e-47 |
| Msa0538650 | Msa0548420 | 0.807712 | 4.420646e-50 | -8.615850e-47 |
| Msa0538650 | Msa0548790 | 0.811050 | 8.496452e-51 | -8.615850e-47 |
| Msa0538650 | Msa0554660 | 0.810837 | 9.449940e-51 | -8.615850e-47 |
| Msa0538650 | Msa0557260 | 0.812801 | 3.531575e-51 | -8.615850e-47 |
| Msa0538650 | Msa0566490 | 0.809955 | 1.465120e-50 | -8.615850e-47 |
| Msa0538650 | Msa0575950 | 0.803582 | 3.254575e-49 | -8.615850e-47 |
| Msa0538650 | Msa0587930 | 0.800972 | 1.121186e-48 | -8.615850e-47 |
| Msa0538650 | Msa0588040 | 0.816789 | 4.614873e-52 | -8.615850e-47 |
| Msa0538650 | Msa0589450 | 0.818173 | 2.250637e-52 | -8.615850e-47 |
| Msa0538650 | Msa0589740 | 0.817671 | 2.922758e-52 | -8.615850e-47 |
| Msa0538650 | Msa0594320 | 0.803269 | 3.778001e-49 | -8.615850e-47 |
| Msa0538650 | Msa0594470 | 0.828562 | 8.393218e-55 | -8.615850e-47 |
| Msa0538650 | Msa0604280 | 0.809876 | 1.523375e-50 | -8.615850e-47 |
| Msa0538650 | Msa0614960 | 0.800780 | 1.227198e-48 | -8.615850e-47 |
| Msa0538650 | Msa0624930 | 0.822686 | 2.074185e-53 | -8.615850e-47 |
| Msa0538650 | Msa0631700 | 0.802511 | 5.418062e-49 | -8.615850e-47 |
| Msa0538650 | Msa0651820 | 0.824758 | 6.787034e-54 | -8.615850e-47 |
| Msa0538650 | Msa0652610 | 0.818514 | 1.883821e-52 | -8.615850e-47 |
| Msa0538650 | Msa0655370 | 0.801999 | 6.905752e-49 | -8.615850e-47 |
| Msa0538650 | Msa0668220 | 0.800103 | 1.686233e-48 | -8.615850e-47 |
| Msa0538650 | Msa0670360 | 0.807150 | 5.816841e-50 | -8.615850e-47 |
| Msa0538650 | Msa0671400 | 0.824278 | 8.801746e-54 | -8.615850e-47 |
| Msa0538650 | Msa0672780 | 0.941437 | 4.168923e-101 | -8.615850e-47 |
| Msa0538650 | Msa0678620 | 0.819395 | 1.188119e-52 | -8.615850e-47 |
| Msa0538650 | Msa0685080 | 0.806515 | 7.922101e-50 | -8.615850e-47 |
| Msa0538650 | Msa0689840 | 0.832928 | 7.145410e-56 | -8.615850e-47 |
| Msa0538650 | Msa0711240 | 0.855274 | 7.044170e-62 | -8.615850e-47 |
| Msa0538650 | Msa0716600 | 0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa0538650 | Msa0716630 | 0.809704 | 1.659234e-50 | -8.615850e-47 |
| Msa0538650 | Msa0716700 | 0.819578 | 1.079314e-52 | -8.615850e-47 |
| Msa0538650 | Msa0716980 | 0.826262 | 2.987030e-54 | -8.615850e-47 |
| Msa0538650 | Msa0717030 | 0.820230 | 7.655923e-53 | -8.615850e-47 |
| Msa0538650 | Msa0721260 | 0.804443 | 2.155384e-49 | -8.615850e-47 |
| Msa0538650 | Msa0727480 | 0.806125 | 9.576638e-50 | -8.615850e-47 |
| Msa0538650 | Msa0730890 | 0.818172 | 2.251311e-52 | -8.615850e-47 |
| Msa0538650 | Msa0735340 | 0.837955 | 3.828899e-57 | -8.615850e-47 |
| Msa0538650 | Msa0738570 | 0.835276 | 1.843654e-56 | -8.615850e-47 |
| Msa0538650 | Msa0753410 | 0.811969 | 5.364916e-51 | -8.615850e-47 |
| Msa0538650 | Msa0756670 | -0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0538650 | Msa0758000 | 0.817851 | 2.661062e-52 | -8.615850e-47 |
| Msa0538650 | Msa0758150 | 0.806635 | 7.475659e-50 | -8.615850e-47 |
| Msa0538650 | Msa0772420 | 0.833378 | 5.518788e-56 | -8.615850e-47 |
| Msa0538650 | Msa0773030 | 0.805040 | 1.616941e-49 | -8.615850e-47 |
| Msa0538650 | Msa0776340 | 0.832517 | 9.037145e-56 | -8.615850e-47 |
| Msa0538650 | Msa0777210 | 0.833844 | 4.222063e-56 | -8.615850e-47 |
| Msa0538650 | Msa0783580 | 0.843901 | 1.053811e-58 | -8.615850e-47 |
| Msa0538650 | Msa0791300 | 0.821295 | 4.355565e-53 | -8.615850e-47 |
| Msa0538650 | Msa0794090 | 0.819472 | 1.140594e-52 | -8.615850e-47 |
| Msa0538650 | Msa0794100 | 0.836692 | 8.063101e-57 | -8.615850e-47 |
| Msa0538650 | Msa0795320 | 0.802096 | 6.596294e-49 | -8.615850e-47 |
| Msa0538650 | Msa0795330 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
| Msa0538650 | Msa0799110 | 0.817226 | 3.679871e-52 | -8.615850e-47 |
| Msa0538650 | Msa0812050 | 0.801539 | 8.586280e-49 | -8.615850e-47 |
| Msa0538650 | Msa0813840 | 0.831876 | 1.301773e-55 | -8.615850e-47 |
| Msa0538650 | Msa0814350 | 0.827815 | 1.269803e-54 | -8.615850e-47 |
| Msa0538650 | Msa0817100 | 0.804474 | 2.123090e-49 | -8.615850e-47 |
| Msa0538650 | Msa0819110 | 0.837598 | 4.728088e-57 | -8.615850e-47 |
| Msa0538650 | Msa0824860 | 0.802870 | 4.568953e-49 | -8.615850e-47 |
| Msa0538650 | Msa0826360 | 0.811395 | 7.151311e-51 | -8.615850e-47 |
| Msa0538650 | Msa0831310 | 0.809355 | 1.971818e-50 | -8.615850e-47 |
| Msa0538650 | Msa0831320 | 0.810915 | 9.092252e-51 | -8.615850e-47 |
| Msa0538650 | Msa0836060 | -0.806372 | 8.492224e-50 | -8.615850e-47 |
| Msa0538650 | Msa0847140 | 0.842757 | 2.128079e-58 | -8.615850e-47 |
| Msa0538650 | Msa0848720 | -0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0538650 | Msa0854380 | 0.813417 | 2.587042e-51 | -8.615850e-47 |
| Msa0538650 | Msa0854860 | 0.821573 | 3.758820e-53 | -8.615850e-47 |
| Msa0538650 | Msa0859230 | 0.809896 | 1.508388e-50 | -8.615850e-47 |
| Msa0538650 | Msa0863840 | 0.814509 | 1.486003e-51 | -8.615850e-47 |
| Msa0538650 | Msa0863850 | 0.805494 | 1.299151e-49 | -8.615850e-47 |
| Msa0538650 | Msa0865830 | 0.802793 | 4.739680e-49 | -8.615850e-47 |
| Msa0538650 | Msa0868870 | 0.810194 | 1.301396e-50 | -8.615850e-47 |
| Msa0538650 | Msa0871420 | 0.814310 | 1.644129e-51 | -8.615850e-47 |
| Msa0538650 | Msa0883610 | 0.812439 | 4.236888e-51 | -8.615850e-47 |
| Msa0538650 | Msa0883640 | 0.813047 | 3.118866e-51 | -8.615850e-47 |
| Msa0538650 | Msa0886370 | 0.836613 | 8.443032e-57 | -8.615850e-47 |
| Msa0538650 | Msa0890210 | 0.813287 | 2.762924e-51 | -8.615850e-47 |
| Msa0538650 | Msa0896920 | 0.820659 | 6.101878e-53 | -8.615850e-47 |
| Msa0538650 | Msa0902340 | 0.833331 | 5.670318e-56 | -8.615850e-47 |
| Msa0538650 | Msa0907170 | 0.806908 | 6.546651e-50 | -8.615850e-47 |
| Msa0538650 | Msa0910590 | 0.846252 | 2.440788e-59 | -8.615850e-47 |
| Msa0538650 | Msa0910830 | 0.820617 | 6.238891e-53 | -8.615850e-47 |
| Msa0538650 | Msa0913500 | 0.822814 | 1.937215e-53 | -8.615850e-47 |
| Msa0538650 | Msa0921860 | 0.805495 | 1.298953e-49 | -8.615850e-47 |
| Msa0538650 | Msa0932930 | 0.834336 | 3.180063e-56 | -8.615850e-47 |
| Msa0538650 | Msa0933610 | 0.816667 | 4.914198e-52 | -8.615850e-47 |
| Msa0538650 | Msa0936630 | 0.800505 | 1.396302e-48 | -8.615850e-47 |
| Msa0538650 | Msa0945320 | 0.811201 | 7.883085e-51 | -8.615850e-47 |
| Msa0538650 | Msa0947420 | 0.809493 | 1.841243e-50 | -8.615850e-47 |
| Msa0538650 | Msa0948430 | 0.854543 | 1.147746e-61 | -8.615850e-47 |
| Msa0538650 | Msa0948460 | 0.802163 | 6.392455e-49 | -8.615850e-47 |
| Msa0538650 | Msa0951060 | 0.838759 | 2.375430e-57 | -8.615850e-47 |
| Msa0538650 | Msa0960090 | 0.814645 | 1.386141e-51 | -8.615850e-47 |
| Msa0538650 | Msa0962260 | 0.814675 | 1.365383e-51 | -8.615850e-47 |
| Msa0538650 | Msa0970790 | 0.817283 | 3.573702e-52 | -8.615850e-47 |
| Msa0538650 | Msa0985250 | 0.836709 | 7.983026e-57 | -8.615850e-47 |
| Msa0538650 | Msa0985260 | 0.827761 | 1.308898e-54 | -8.615850e-47 |
| Msa0538650 | Msa0985380 | 0.812594 | 3.919231e-51 | -8.615850e-47 |
| Msa0538650 | Msa0985700 | 0.813849 | 2.078271e-51 | -8.615850e-47 |
| Msa0538650 | Msa0987550 | 0.835119 | 2.019651e-56 | -8.615850e-47 |
| Msa0538650 | Msa0996940 | 0.806778 | 6.974046e-50 | -8.615850e-47 |
| Msa0538650 | Msa1003120 | 0.807919 | 3.994294e-50 | -8.615850e-47 |
| Msa0538650 | Msa1005370 | 0.814202 | 1.736904e-51 | -8.615850e-47 |
| Msa0538650 | Msa1024350 | 0.811709 | 6.111684e-51 | -8.615850e-47 |
| Msa0538650 | Msa1026490 | 0.823022 | 1.732265e-53 | -8.615850e-47 |
| Msa0538650 | Msa1029860 | 0.807899 | 4.034383e-50 | -8.615850e-47 |
| Msa0538650 | Msa1035880 | 0.810323 | 1.220540e-50 | -8.615850e-47 |
| Msa0538650 | Msa1036590 | 0.817337 | 3.474926e-52 | -8.615850e-47 |
| Msa0538650 | Msa1037530 | 0.812139 | 4.927442e-51 | -8.615850e-47 |
| Msa0538650 | Msa1040330 | 0.820065 | 8.350316e-53 | -8.615850e-47 |
| Msa0538650 | Msa1046220 | 0.800818 | 1.205665e-48 | -8.615850e-47 |
| Msa0538650 | Msa1047300 | 0.825261 | 5.162297e-54 | -8.615850e-47 |
| Msa0538650 | Msa1047340 | 0.826446 | 2.701094e-54 | -8.615850e-47 |
| Msa0538650 | Msa1061670 | 0.806445 | 8.199217e-50 | -8.615850e-47 |
| Msa0538650 | Msa1061760 | 0.807443 | 5.042552e-50 | -8.615850e-47 |
| Msa0538650 | Msa1061780 | 0.802754 | 4.828351e-49 | -8.615850e-47 |
| Msa0538650 | Msa1061790 | 0.800232 | 1.587426e-48 | -8.615850e-47 |
| Msa0538650 | Msa1064940 | 0.803653 | 3.145691e-49 | -8.615850e-47 |
| Msa0538650 | Msa1068780 | 0.800512 | 1.391887e-48 | -8.615850e-47 |
| Msa0538650 | Msa1068900 | 0.801151 | 1.030649e-48 | -8.615850e-47 |
| Msa0538650 | Msa1074560 | 0.823631 | 1.248665e-53 | -8.615850e-47 |
| Msa0538650 | Msa1076830 | 0.827475 | 1.532475e-54 | -8.615850e-47 |
| Msa0538650 | Msa1076900 | 0.821081 | 4.880643e-53 | -8.615850e-47 |
| Msa0538650 | Msa1082080 | 0.804722 | 1.884909e-49 | -8.615850e-47 |
| Msa0538650 | Msa1083100 | 0.825093 | 5.656592e-54 | -8.615850e-47 |
| Msa0538650 | Msa1085560 | 0.812211 | 4.753019e-51 | -8.615850e-47 |
| Msa0538650 | Msa1087200 | 0.827411 | 1.588238e-54 | -8.615850e-47 |
| Msa0538650 | Msa1087210 | 0.830911 | 2.248607e-55 | -8.615850e-47 |
| Msa0538650 | Msa1087380 | 0.810454 | 1.143303e-50 | -8.615850e-47 |
| Msa0538650 | Msa1090180 | 0.802424 | 5.646398e-49 | -8.615850e-47 |
| Msa0538650 | Msa1090990 | 0.802528 | 5.374666e-49 | -8.615850e-47 |
| Msa0538650 | Msa1107320 | 0.822765 | 1.988589e-53 | -8.615850e-47 |
| Msa0538650 | Msa1108960 | 0.819134 | 1.361863e-52 | -8.615850e-47 |
| Msa0538650 | Msa1109880 | 0.817700 | 2.878136e-52 | -8.615850e-47 |
| Msa0538650 | Msa1109890 | 0.807244 | 5.557016e-50 | -8.615850e-47 |
| Msa0538650 | Msa1111650 | 0.833806 | 4.315550e-56 | -8.615850e-47 |
| Msa0538650 | Msa1112630 | 0.808671 | 2.762315e-50 | -8.615850e-47 |
| Msa0538650 | Msa1122550 | 0.815754 | 7.861471e-52 | -8.615850e-47 |
| Msa0538650 | Msa1124220 | 0.826492 | 2.633402e-54 | -8.615850e-47 |
| Msa0538650 | Msa1130410 | 0.800247 | 1.576445e-48 | -8.615850e-47 |
| Msa0538650 | Msa1131770 | 0.806111 | 9.642067e-50 | -8.615850e-47 |
| Msa0538650 | Msa1133850 | 0.817601 | 3.029736e-52 | -8.615850e-47 |
| Msa0538650 | Msa1138110 | 0.814073 | 1.854821e-51 | -8.615850e-47 |
| Msa0538650 | Msa1142600 | 0.805277 | 1.442699e-49 | -8.615850e-47 |
| Msa0538650 | Msa1146980 | 0.816569 | 5.169027e-52 | -8.615850e-47 |
| Msa0538650 | Msa1150860 | 0.804681 | 1.922067e-49 | -8.615850e-47 |
| Msa0538650 | Msa1156670 | 0.822036 | 2.936770e-53 | -8.615850e-47 |
| Msa0538650 | Msa1156740 | 0.801463 | 8.898245e-49 | -8.615850e-47 |
| Msa0538650 | Msa1163300 | 0.813555 | 2.412628e-51 | -8.615850e-47 |
| Msa0538650 | Msa1163710 | 0.817951 | 2.526519e-52 | -8.615850e-47 |
| Msa0538650 | Msa1187750 | 0.823100 | 1.661027e-53 | -8.615850e-47 |
| Msa0538650 | Msa1191960 | -0.800978 | 1.118094e-48 | -8.615850e-47 |
| Msa0538650 | Msa1211130 | 0.803205 | 3.895991e-49 | -8.615850e-47 |
| Msa0538650 | Msa1211320 | 0.802849 | 4.614239e-49 | -8.615850e-47 |
| Msa0538650 | Msa1214960 | 0.842281 | 2.845978e-58 | -8.615850e-47 |
| Msa0538650 | Msa1251500 | 0.806917 | 6.516736e-50 | -8.615850e-47 |
| Msa0538650 | Msa1259560 | 0.836913 | 7.081325e-57 | -8.615850e-47 |
| Msa0538650 | Msa1259570 | 0.803871 | 2.834146e-49 | -8.615850e-47 |
| Msa0538650 | Msa1263120 | 0.800937 | 1.140310e-48 | -8.615850e-47 |
| Msa0538650 | Msa1263370 | 0.806770 | 7.001562e-50 | -8.615850e-47 |
| Msa0538650 | Msa1269200 | 0.814282 | 1.667506e-51 | -8.615850e-47 |
| Msa0538650 | Msa1269500 | 0.803784 | 2.954714e-49 | -8.615850e-47 |
| Msa0538650 | Msa1281130 | 0.807436 | 5.058951e-50 | -8.615850e-47 |
| Msa0538650 | Msa1286950 | -0.811146 | 8.101885e-51 | -8.615850e-47 |
| Msa0538650 | Msa1299280 | 0.816471 | 5.437629e-52 | -8.615850e-47 |
| Msa0538650 | Msa1311070 | 0.819673 | 1.026542e-52 | -8.615850e-47 |
| Msa0538650 | Msa1319230 | -0.805575 | 1.249426e-49 | -8.615850e-47 |
| Msa0538650 | Msa1320330 | 0.800294 | 1.542073e-48 | -8.615850e-47 |
| Msa0538650 | Msa1320660 | -0.804695 | 1.909543e-49 | -8.615850e-47 |
| Msa0538650 | Msa1334000 | 0.804482 | 2.115053e-49 | -8.615850e-47 |
| Msa0538650 | Msa1335500 | 0.825637 | 4.205255e-54 | -8.615850e-47 |
| Msa0538650 | Msa1344930 | 0.821398 | 4.123923e-53 | -8.615850e-47 |
| Msa0538650 | Msa1345390 | 0.812436 | 4.243633e-51 | -8.615850e-47 |
| Msa0538650 | Msa1357490 | 0.803275 | 3.767144e-49 | -8.615850e-47 |
| Msa0538650 | Msa1357750 | 0.800140 | 1.656900e-48 | -8.615850e-47 |
| Msa0538650 | Msa1363690 | 0.817511 | 3.175081e-52 | -8.615850e-47 |
| Msa0538650 | Msa1370930 | 0.821762 | 3.398770e-53 | -8.615850e-47 |
| Msa0538650 | Msa1373560 | 0.832648 | 8.386524e-56 | -8.615850e-47 |
| Msa0538650 | Msa1375640 | 0.862758 | 4.038460e-64 | -8.615850e-47 |
| Msa0538650 | Msa1376070 | 0.832099 | 1.146727e-55 | -8.615850e-47 |
| Msa0538650 | Msa1376520 | 0.884286 | 2.182922e-71 | -8.615850e-47 |
| Msa0538650 | Msa1377190 | 0.818882 | 1.554038e-52 | -8.615850e-47 |
| Msa0538650 | Msa1377460 | 0.812323 | 4.491076e-51 | -8.615850e-47 |
| Msa0538650 | Msa1377520 | 0.816833 | 4.511009e-52 | -8.615850e-47 |
| Msa0538650 | Msa1378950 | 0.817097 | 3.934175e-52 | -8.615850e-47 |
| Msa0538650 | Msa1384130 | 0.804962 | 1.678808e-49 | -8.615850e-47 |
| Msa0538650 | Msa1390040 | 0.922145 | 1.437318e-88 | -8.615850e-47 |
| Msa0538650 | Msa1392570 | -0.803463 | 3.444633e-49 | -8.615850e-47 |
| Msa0538650 | Msa1395690 | 0.813273 | 2.782510e-51 | -8.615850e-47 |
| Msa0538650 | Msa1395720 | 0.835372 | 1.744086e-56 | -8.615850e-47 |
| Msa0538650 | Msa1396550 | 0.828832 | 7.219049e-55 | -8.615850e-47 |
| Msa0538650 | Msa1398110 | 0.805366 | 1.382217e-49 | -8.615850e-47 |
| Msa0538650 | Msa1400290 | -0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0538650 | Msa1407670 | 0.807265 | 5.499511e-50 | -8.615850e-47 |
| Msa0538650 | Msa1409060 | 0.831088 | 2.035126e-55 | -8.615850e-47 |
| Msa0538650 | Msa1417220 | 0.818952 | 1.498160e-52 | -8.615850e-47 |
| Msa0538650 | Msa1421120 | 0.820676 | 6.046832e-53 | -8.615850e-47 |
| Msa0538650 | Msa1421130 | 0.810901 | 9.151496e-51 | -8.615850e-47 |
| Msa0538650 | Msa1426690 | -0.800712 | 1.267052e-48 | -8.615850e-47 |
| Msa0538650 | Msa1429190 | 0.866486 | 2.752416e-65 | -8.615850e-47 |
| Msa0538650 | Msa1430250 | 0.823519 | 1.325641e-53 | -8.615850e-47 |
| Msa0538650 | Msa1434700 | 0.812031 | 5.202290e-51 | -8.615850e-47 |
| Msa0538650 | Msa1445780 | 0.816763 | 4.676627e-52 | -8.615850e-47 |
| Msa0538650 | Msa1446090 | 0.814379 | 1.587806e-51 | -8.615850e-47 |
| Msa0538650 | Msa1449770 | 0.809430 | 1.900040e-50 | -8.615850e-47 |
| Msa0538650 | Msa1458270 | 0.800526 | 1.383197e-48 | -8.615850e-47 |
| Msa0538650 | Msa1459930 | 0.800423 | 1.451602e-48 | -8.615850e-47 |
| Msa0538650 | Msa1463820 | 0.804106 | 2.532408e-49 | -8.615850e-47 |
| Msa0538650 | Msa1464140 | 0.824465 | 7.954018e-54 | -8.615850e-47 |
| Msa0538650 | Msa1466530 | 0.808761 | 2.641922e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538650 | MtrunA17_Chr4g0013381 | 58.400 | 125 | 45 | 3 | 1 | 125 | 1 | 118 | 2.74e-27 | 98.6 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 49.367 | 158 | 60 | 4 | 6 | 144 | 18 | 174 | 1.15e-19 | 84.3 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 50.350 | 143 | 51 | 5 | 21 | 144 | 3 | 144 | 1.03e-18 | 81.6 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 44.509 | 173 | 61 | 5 | 6 | 144 | 58 | 229 | 4.22e-17 | 77.0 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 46.061 | 165 | 57 | 6 | 5 | 144 | 92 | 249 | 1.71e-16 | 75.1 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 45.912 | 159 | 57 | 5 | 10 | 144 | 192 | 345 | 2.40e-16 | 74.7 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 46.108 | 167 | 56 | 6 | 7 | 144 | 214 | 375 | 1.39e-15 | 72.8 |
| Msa0538650 | MtrunA17_Chr4g0013451 | 39.286 | 168 | 70 | 5 | 10 | 152 | 308 | 468 | 4.16e-14 | 68.6 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 48.750 | 160 | 62 | 4 | 6 | 146 | 18 | 176 | 1.70e-19 | 84.0 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 51.049 | 143 | 50 | 5 | 21 | 144 | 3 | 144 | 5.07e-19 | 82.4 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 49.315 | 146 | 59 | 4 | 10 | 146 | 227 | 366 | 2.69e-18 | 80.5 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 46.584 | 161 | 64 | 4 | 6 | 146 | 58 | 216 | 4.21e-18 | 79.7 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 46.386 | 166 | 54 | 6 | 8 | 144 | 175 | 334 | 5.80e-18 | 79.3 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 49.640 | 139 | 58 | 4 | 6 | 144 | 278 | 404 | 7.27e-17 | 76.3 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 44.318 | 176 | 63 | 6 | 5 | 146 | 92 | 266 | 3.54e-15 | 71.6 |
| Msa0538650 | MtrunA17_Chr4g0013421 | 40.678 | 177 | 65 | 7 | 10 | 152 | 327 | 497 | 4.19e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTACCCGAGGGAACTA+TGG | 0.289434 | 4_1:+18126335 | Msa0538650:exon |
| TAGACTGGAGGTTTCTCAAC+TGG | 0.297152 | 4_1:+18126419 | Msa0538650:CDS |
| AACCGGAGGCTTGTCATAAT+TGG | 0.298691 | 4_1:+18126991 | Msa0538650:CDS |
| GTCGAGAAGCCACCAGTTTA+CGG | 0.299440 | 4_1:-18126371 | None:intergenic |
| TGCTCTCTTTGTCATCCCTC+AGG | 0.337569 | 4_1:-18127020 | None:intergenic |
| TACACCGGTGGCTTGTAAAC+TGG | 0.362669 | 4_1:+18126584 | Msa0538650:CDS |
| CCATAGTTCCCTCGGGTAGA+TGG | 0.398885 | 4_1:-18126335 | None:intergenic |
| TCAACTGGTGGCTTGTAGAC+TGG | 0.401548 | 4_1:+18126734 | Msa0538650:CDS |
| TACACCGGTGGTTGGTAAAC+CGG | 0.401947 | 4_1:+18126974 | Msa0538650:CDS |
| TCAACGGGTGGCTTGTAAAC+AGG | 0.407316 | 4_1:+18126644 | Msa0538650:CDS |
| AGACTGGAGGTTTCTCAACT+GGG | 0.425047 | 4_1:+18126420 | Msa0538650:CDS |
| TATACAGGTGGCTTGTAAAC+CGG | 0.427317 | 4_1:+18126764 | Msa0538650:intron |
| TGGTGAGGAGGTCCGTAAAC+TGG | 0.427954 | 4_1:+18126359 | Msa0538650:CDS |
| TAAACTGGTGGCTTCTCGAC+TGG | 0.430061 | 4_1:+18126374 | Msa0538650:CDS |
| TAGACTGGAGGCTTCTCAAC+TGG | 0.434291 | 4_1:+18126719 | Msa0538650:CDS |
| TCGACTGGAGGCTTGTAAAC+TGG | 0.436990 | 4_1:+18126389 | Msa0538650:CDS |
| TACACCGGAGGCTTGTAAAC+AGG | 0.441057 | 4_1:+18126614 | Msa0538650:CDS |
| TACACCGGAGGCTTGTAAAC+AGG | 0.441057 | 4_1:+18126824 | Msa0538650:CDS |
| TATACAGGTGGCTTGTAGAC+TGG | 0.441186 | 4_1:+18126704 | Msa0538650:CDS |
| TAAACTGGTGGCTTGTAGAC+TGG | 0.441265 | 4_1:+18126404 | Msa0538650:CDS |
| GCCTCCTGTTTACAAGCCTC+CGG | 0.443261 | 4_1:-18126783 | None:intergenic |
| TAAACAGGTGGCTTGTAGAC+TGG | 0.443434 | 4_1:+18126659 | Msa0538650:CDS |
| TAAACCGGAGGCTTGTAAAC+AGG | 0.444221 | 4_1:+18126779 | Msa0538650:CDS |
| TAGACTGGAGGCTTGTAGAC+TGG | 0.451483 | 4_1:+18126674 | Msa0538650:CDS |
| TAAACAGGAGGCTTCTCAAC+TGG | 0.459812 | 4_1:+18126794 | Msa0538650:CDS |
| CTCACCACCCATAGTTCCCT+CGG | 0.465591 | 4_1:-18126343 | None:intergenic |
| GCTCTCTTTGTCATCCCTCA+GGG | 0.466378 | 4_1:-18127019 | None:intergenic |
| TAAACAGGAGGCTTCTCAAC+GGG | 0.468428 | 4_1:+18126629 | Msa0538650:CDS |
| TCAACTGGTGGCTTATACAC+CGG | 0.468440 | 4_1:+18126959 | Msa0538650:CDS |
| TAGACTGGAGGCTTGTATAC+AGG | 0.470954 | 4_1:+18126689 | Msa0538650:CDS |
| TCAACTGGTGGCTTGTACAC+CGG | 0.475943 | 4_1:+18126809 | Msa0538650:CDS |
| GCCTCCTGTTTACAAGCCTC+CGG | 0.502841 | 4_1:-18126618 | None:intergenic |
| TATACAGGTGGCTTGTACAC+CGG | 0.503330 | 4_1:+18126569 | Msa0538650:intron |
| TGCCAATTATGACAAGCCTC+CGG | 0.514734 | 4_1:-18126993 | None:intergenic |
| TAAACTGGAGGCTTGTACAC+CGG | 0.514976 | 4_1:+18126599 | Msa0538650:CDS |
| ACCTCCTGTTTACAAGCCTC+CGG | 0.525114 | 4_1:-18126828 | None:intergenic |
| GACTGGAGGTTTCTCAACTG+GGG | 0.534766 | 4_1:+18126421 | Msa0538650:CDS |
| CATCTACCCGAGGGAACTAT+GGG | 0.546915 | 4_1:+18126336 | Msa0538650:exon |
| GGGAACTATGGGTGGTGAGG+AGG | 0.563963 | 4_1:+18126347 | Msa0538650:exon |
| TCACCACCCATAGTTCCCTC+GGG | 0.566421 | 4_1:-18126342 | None:intergenic |
| ACTGGAGGTTTCTCAACTGG+GGG | 0.581297 | 4_1:+18126422 | Msa0538650:CDS |
| CGAGGGAACTATGGGTGGTG+AGG | 0.583741 | 4_1:+18126344 | Msa0538650:exon |
| GCCTCCAGTTTACAAGCCAC+CGG | 0.592029 | 4_1:-18126588 | None:intergenic |
| ACTGGAGGCTTCTCAACTGG+TGG | 0.597757 | 4_1:+18126722 | Msa0538650:CDS |
| ACTGGTGGCTTGTAGACTGG+AGG | 0.603659 | 4_1:+18126737 | Msa0538650:CDS |
| ACTGGTGGCTTCTCGACTGG+AGG | 0.616423 | 4_1:+18126377 | Msa0538650:CDS |
| ACTGGAGGCTTGTAAACTGG+TGG | 0.629358 | 4_1:+18126392 | Msa0538650:CDS |
| GTAAACAGGAGGCTTCTCAA+CGG | 0.633357 | 4_1:+18126628 | Msa0538650:CDS |
| ACCGGAGGCTTGTAAACAGG+AGG | 0.635764 | 4_1:+18126827 | Msa0538650:CDS |
| GTGGCTTATACACCGGTGGT+TGG | 0.636457 | 4_1:+18126966 | Msa0538650:CDS |
| ACCGGAGGCTTGTAAACAGG+AGG | 0.636882 | 4_1:+18126782 | Msa0538650:CDS |
| TCATAATTGGCAAGACCCTG+AGG | 0.637663 | 4_1:+18127004 | Msa0538650:CDS |
| TGAGGAGGTCCGTAAACTGG+TGG | 0.639666 | 4_1:+18126362 | Msa0538650:CDS |
| ACAGGAGGCTTCTCAACTGG+TGG | 0.640818 | 4_1:+18126797 | Msa0538650:CDS |
| CATAATTGGCAAGACCCTGA+GGG | 0.642655 | 4_1:+18127005 | Msa0538650:CDS |
| GCCTCCGGTTTACCAACCAC+CGG | 0.644187 | 4_1:-18126978 | None:intergenic |
| ACAGGAGGCTTCTCAACGGG+TGG | 0.644775 | 4_1:+18126632 | Msa0538650:CDS |
| ACTGGTGGCTTATACACCGG+TGG | 0.647306 | 4_1:+18126962 | Msa0538650:CDS |
| ACCGGAGGCTTGTAAACAGG+AGG | 0.649300 | 4_1:+18126617 | Msa0538650:CDS |
| ACTGGTGGCTTGTAGACTGG+AGG | 0.655799 | 4_1:+18126407 | Msa0538650:CDS |
| CTACCCGAGGGAACTATGGG+TGG | 0.657162 | 4_1:+18126339 | Msa0538650:exon |
| ACCGGTGGCTTGTAAACTGG+AGG | 0.659016 | 4_1:+18126587 | Msa0538650:CDS |
| ACTGGAGGCTTGTAGACTGG+AGG | 0.659489 | 4_1:+18126677 | Msa0538650:CDS |
| ACTGGAGGCTTGTATACAGG+TGG | 0.663475 | 4_1:+18126692 | Msa0538650:CDS |
| ACGGGTGGCTTGTAAACAGG+TGG | 0.663911 | 4_1:+18126647 | Msa0538650:CDS |
| ACTGGTGGCTTGTACACCGG+AGG | 0.668021 | 4_1:+18126812 | Msa0538650:CDS |
| ACCGGTGGTTGGTAAACCGG+AGG | 0.675579 | 4_1:+18126977 | Msa0538650:CDS |
| ACAGGTGGCTTGTAGACTGG+AGG | 0.678345 | 4_1:+18126707 | Msa0538650:CDS |
| ACAGGTGGCTTGTAGACTGG+AGG | 0.680593 | 4_1:+18126662 | Msa0538650:CDS |
| ACTGGAGGCTTGTACACCGG+AGG | 0.680728 | 4_1:+18126602 | Msa0538650:CDS |
| CAAGTTGTACCATCTACCCG+AGG | 0.681973 | 4_1:+18126326 | Msa0538650:five_prime_UTR |
| ACAGGTGGCTTGTAAACCGG+AGG | 0.689338 | 4_1:+18126767 | Msa0538650:intron |
| ACAGGTGGCTTGTACACCGG+TGG | 0.693604 | 4_1:+18126572 | Msa0538650:intron |
| AAGTTGTACCATCTACCCGA+GGG | 0.700819 | 4_1:+18126327 | Msa0538650:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAGACTGGAGGTTTGTATAC+AGG | + | chr4_1:18126749-18126768 | Msa0538650:intron | 40.0% | |
| ! | TATACAGGTGGCTTGTAAAC+CGG | + | chr4_1:18126764-18126783 | Msa0538650:intron | 40.0% |
| TAAACAGGAGGTTTGTAGAC+CGG | + | chr4_1:18126839-18126858 | Msa0538650:intron | 40.0% | |
| AAGTTGTACCATCTACCCGA+GGG | + | chr4_1:18126327-18126346 | Msa0538650:five_prime_UTR | 45.0% | |
| ! | TAAACTGGTGGCTTGTAGAC+TGG | + | chr4_1:18126404-18126423 | Msa0538650:CDS | 45.0% |
| TAGACTGGAGGTTTCTCAAC+TGG | + | chr4_1:18126419-18126438 | Msa0538650:CDS | 45.0% | |
| AGACTGGAGGTTTCTCAACT+GGG | + | chr4_1:18126420-18126439 | Msa0538650:CDS | 45.0% | |
| ! | TAAACAGGTGGCTTGTAGAC+TGG | + | chr4_1:18126449-18126468 | Msa0538650:intron | 45.0% |
| CTCAACTGGAGGCTTGTAAA+CGG | + | chr4_1:18126523-18126542 | Msa0538650:intron | 45.0% | |
| TCAACTGGAGGCTTGTAAAC+GGG | + | chr4_1:18126524-18126543 | Msa0538650:intron | 45.0% | |
| TAGACTGGAGGCTTGTATAC+AGG | + | chr4_1:18126554-18126573 | Msa0538650:intron | 45.0% | |
| ! | TATACAGGTGGCTTGTACAC+CGG | + | chr4_1:18126569-18126588 | Msa0538650:intron | 45.0% |
| TAAACTGGAGGCTTGTACAC+CGG | + | chr4_1:18126599-18126618 | Msa0538650:CDS | 45.0% | |
| GTAAACAGGAGGCTTCTCAA+CGG | + | chr4_1:18126628-18126647 | Msa0538650:CDS | 45.0% | |
| TAAACAGGAGGCTTCTCAAC+GGG | + | chr4_1:18126629-18126648 | Msa0538650:CDS | 45.0% | |
| ! | TAAACAGGTGGCTTGTAGAC+TGG | + | chr4_1:18126449-18126468 | Msa0538650:intron | 45.0% |
| TAGACTGGAGGCTTGTATAC+AGG | + | chr4_1:18126554-18126573 | Msa0538650:intron | 45.0% | |
| ! | TATACAGGTGGCTTGTAGAC+TGG | + | chr4_1:18126704-18126723 | Msa0538650:CDS | 45.0% |
| ACTGGAGGTTTGTATACAGG+TGG | + | chr4_1:18126752-18126771 | Msa0538650:intron | 45.0% | |
| TAAACCGGAGGCTTGTAAAC+AGG | + | chr4_1:18126779-18126798 | Msa0538650:CDS | 45.0% | |
| TAAACAGGAGGCTTCTCAAC+TGG | + | chr4_1:18126629-18126648 | Msa0538650:CDS | 45.0% | |
| AAACAGGAGGTTTGTAGACC+GGG | + | chr4_1:18126840-18126859 | Msa0538650:intron | 45.0% | |
| ! | TACACAGGTGGCTTTTCTAC+TGG | + | chr4_1:18126869-18126888 | Msa0538650:intron | 45.0% |
| ! | ACACAGGTGGCTTTTCTACT+GGG | + | chr4_1:18126870-18126889 | Msa0538650:intron | 45.0% |
| TACACAGGTGGCTTATACAC+AGG | + | chr4_1:18126899-18126918 | Msa0538650:intron | 45.0% | |
| TCAACTGGTGGCTTATACAC+CGG | + | chr4_1:18126959-18126978 | Msa0538650:CDS | 45.0% | |
| AACCGGAGGCTTGTCATAAT+TGG | + | chr4_1:18126991-18127010 | Msa0538650:CDS | 45.0% | |
| TGCCAATTATGACAAGCCTC+CGG | - | chr4_1:18126996-18127015 | None:intergenic | 45.0% | |
| TCATAATTGGCAAGACCCTG+AGG | + | chr4_1:18127004-18127023 | Msa0538650:CDS | 45.0% | |
| CATAATTGGCAAGACCCTGA+GGG | + | chr4_1:18127005-18127024 | Msa0538650:CDS | 45.0% | |
| CAAGTTGTACCATCTACCCG+AGG | + | chr4_1:18126326-18126345 | Msa0538650:five_prime_UTR | 50.0% | |
| CATCTACCCGAGGGAACTAT+GGG | + | chr4_1:18126336-18126355 | Msa0538650:exon | 50.0% | |
| GTCGAGAAGCCACCAGTTTA+CGG | - | chr4_1:18126374-18126393 | None:intergenic | 50.0% | |
| TAAACTGGTGGCTTCTCGAC+TGG | + | chr4_1:18126374-18126393 | Msa0538650:CDS | 50.0% | |
| TCGACTGGAGGCTTGTAAAC+TGG | + | chr4_1:18126389-18126408 | Msa0538650:CDS | 50.0% | |
| ACTGGAGGCTTGTAAACTGG+TGG | + | chr4_1:18126392-18126411 | Msa0538650:CDS | 50.0% | |
| GACTGGAGGTTTCTCAACTG+GGG | + | chr4_1:18126421-18126440 | Msa0538650:CDS | 50.0% | |
| ACTGGAGGTTTCTCAACTGG+GGG | + | chr4_1:18126422-18126441 | Msa0538650:CDS | 50.0% | |
| TCAACTGGGGGCTTGTAAAC+AGG | + | chr4_1:18126434-18126453 | Msa0538650:CDS | 50.0% | |
| TAGACTGGAGGCTTCTCAAC+TGG | + | chr4_1:18126464-18126483 | Msa0538650:intron | 50.0% | |
| AGACTGGAGGCTTCTCAACT+GGG | + | chr4_1:18126465-18126484 | Msa0538650:intron | 50.0% | |
| ! | TAGACTGGTGGCTTGTAGAC+CGG | + | chr4_1:18126494-18126513 | Msa0538650:intron | 50.0% |
| TAGACCGGAGGTTTCTCAAC+TGG | + | chr4_1:18126509-18126528 | Msa0538650:intron | 50.0% | |
| ! | TAAACGGGTGGCTTGTAGAC+TGG | + | chr4_1:18126539-18126558 | Msa0538650:intron | 50.0% |
| ACTGGAGGCTTGTATACAGG+TGG | + | chr4_1:18126557-18126576 | Msa0538650:intron | 50.0% | |
| ! | TACACCGGTGGCTTGTAAAC+TGG | + | chr4_1:18126584-18126603 | Msa0538650:CDS | 50.0% |
| TACACCGGAGGCTTGTAAAC+AGG | + | chr4_1:18126614-18126633 | Msa0538650:CDS | 50.0% | |
| ! | TCAACGGGTGGCTTGTAAAC+AGG | + | chr4_1:18126644-18126663 | Msa0538650:CDS | 50.0% |
| TAGACTGGAGGCTTGTAGAC+TGG | + | chr4_1:18126674-18126693 | Msa0538650:CDS | 50.0% | |
| ACTGGAGGCTTGTATACAGG+TGG | + | chr4_1:18126557-18126576 | Msa0538650:intron | 50.0% | |
| TAGACTGGAGGCTTCTCAAC+TGG | + | chr4_1:18126464-18126483 | Msa0538650:intron | 50.0% | |
| ! | TCAACTGGTGGCTTGTAGAC+TGG | + | chr4_1:18126734-18126753 | Msa0538650:CDS | 50.0% |
| ! | TCAACTGGTGGCTTGTACAC+CGG | + | chr4_1:18126809-18126828 | Msa0538650:CDS | 50.0% |
| TACACCGGAGGCTTGTAAAC+AGG | + | chr4_1:18126614-18126633 | Msa0538650:CDS | 50.0% | |
| ACCTCCTGTTTACAAGCCTC+CGG | - | chr4_1:18126831-18126850 | None:intergenic | 50.0% | |
| AACAGGAGGTTTGTAGACCG+GGG | + | chr4_1:18126841-18126860 | Msa0538650:intron | 50.0% | |
| ! | CACAGGTGGCTTTTCTACTG+GGG | + | chr4_1:18126871-18126890 | Msa0538650:intron | 50.0% |
| ! | ACAGGTGGCTTTTCTACTGG+GGG | + | chr4_1:18126872-18126891 | Msa0538650:intron | 50.0% |
| ACAGGTGGCTTATACACAGG+TGG | + | chr4_1:18126902-18126921 | Msa0538650:intron | 50.0% | |
| TACACAGGTGGCTTCTCTAC+AGG | + | chr4_1:18126914-18126933 | Msa0538650:intron | 50.0% | |
| ACACAGGTGGCTTCTCTACA+GGG | + | chr4_1:18126915-18126934 | Msa0538650:intron | 50.0% | |
| TCTACAGGGGGTTTGTAGAC+AGG | + | chr4_1:18126929-18126948 | Msa0538650:intron | 50.0% | |
| CTACAGGGGGTTTGTAGACA+GGG | + | chr4_1:18126930-18126949 | Msa0538650:intron | 50.0% | |
| TACAGGGGGTTTGTAGACAG+GGG | + | chr4_1:18126931-18126950 | Msa0538650:intron | 50.0% | |
| TAGACAGGGGGTTTCTCAAC+TGG | + | chr4_1:18126944-18126963 | Msa0538650:CDS | 50.0% | |
| !! | TACACCGGTGGTTGGTAAAC+CGG | + | chr4_1:18126974-18126993 | Msa0538650:CDS | 50.0% |
| GCTCTCTTTGTCATCCCTCA+GGG | - | chr4_1:18127022-18127041 | None:intergenic | 50.0% | |
| TGCTCTCTTTGTCATCCCTC+AGG | - | chr4_1:18127023-18127042 | None:intergenic | 50.0% | |
| CCATAGTTCCCTCGGGTAGA+TGG | - | chr4_1:18126338-18126357 | None:intergenic | 55.0% | |
| CCATCTACCCGAGGGAACTA+TGG | + | chr4_1:18126335-18126354 | Msa0538650:exon | 55.0% | |
| TCACCACCCATAGTTCCCTC+GGG | - | chr4_1:18126345-18126364 | None:intergenic | 55.0% | |
| CTCACCACCCATAGTTCCCT+CGG | - | chr4_1:18126346-18126365 | None:intergenic | 55.0% | |
| TGGTGAGGAGGTCCGTAAAC+TGG | + | chr4_1:18126359-18126378 | Msa0538650:CDS | 55.0% | |
| TGAGGAGGTCCGTAAACTGG+TGG | + | chr4_1:18126362-18126381 | Msa0538650:CDS | 55.0% | |
| ! | ACTGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126407-18126426 | Msa0538650:CDS | 55.0% |
| ACTGGGGGCTTGTAAACAGG+TGG | + | chr4_1:18126437-18126456 | Msa0538650:intron | 55.0% | |
| ! | ACAGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126452-18126471 | Msa0538650:intron | 55.0% |
| GACTGGAGGCTTCTCAACTG+GGG | + | chr4_1:18126466-18126485 | Msa0538650:intron | 55.0% | |
| ACTGGAGGCTTCTCAACTGG+GGG | + | chr4_1:18126467-18126486 | Msa0538650:intron | 55.0% | |
| TCAACTGGGGGCTTGTAGAC+TGG | + | chr4_1:18126479-18126498 | Msa0538650:intron | 55.0% | |
| ACCGGAGGTTTCTCAACTGG+AGG | + | chr4_1:18126512-18126531 | Msa0538650:intron | 55.0% | |
| GCCTCCAGTTGAGAAACCTC+CGG | - | chr4_1:18126516-18126535 | None:intergenic | 55.0% | |
| ACTGGAGGCTTGTAAACGGG+TGG | + | chr4_1:18126527-18126546 | Msa0538650:intron | 55.0% | |
| ! | ACCGGTGGCTTGTAAACTGG+AGG | + | chr4_1:18126587-18126606 | Msa0538650:CDS | 55.0% |
| GCCTCCAGTTTACAAGCCAC+CGG | - | chr4_1:18126591-18126610 | None:intergenic | 55.0% | |
| ACCGGAGGCTTGTAAACAGG+AGG | + | chr4_1:18126617-18126636 | Msa0538650:CDS | 55.0% | |
| GCCTCCTGTTTACAAGCCTC+CGG | - | chr4_1:18126621-18126640 | None:intergenic | 55.0% | |
| ! | ACGGGTGGCTTGTAAACAGG+TGG | + | chr4_1:18126647-18126666 | Msa0538650:CDS | 55.0% |
| ! | ACAGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126452-18126471 | Msa0538650:intron | 55.0% |
| ACTGGAGGCTTGTAGACTGG+AGG | + | chr4_1:18126677-18126696 | Msa0538650:CDS | 55.0% | |
| ! | ACAGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126452-18126471 | Msa0538650:intron | 55.0% |
| ACTGGAGGCTTCTCAACTGG+TGG | + | chr4_1:18126467-18126486 | Msa0538650:intron | 55.0% | |
| ! | ACTGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126407-18126426 | Msa0538650:CDS | 55.0% |
| ! | ACAGGTGGCTTGTAAACCGG+AGG | + | chr4_1:18126767-18126786 | Msa0538650:intron | 55.0% |
| ACCGGAGGCTTGTAAACAGG+AGG | + | chr4_1:18126617-18126636 | Msa0538650:CDS | 55.0% | |
| GCCTCCTGTTTACAAGCCTC+CGG | - | chr4_1:18126621-18126640 | None:intergenic | 55.0% | |
| ACAGGAGGCTTCTCAACTGG+TGG | + | chr4_1:18126797-18126816 | Msa0538650:CDS | 55.0% | |
| ACCGGAGGCTTGTAAACAGG+AGG | + | chr4_1:18126617-18126636 | Msa0538650:CDS | 55.0% | |
| ACAGGAGGTTTGTAGACCGG+GGG | + | chr4_1:18126842-18126861 | Msa0538650:intron | 55.0% | |
| TAGACCGGGGGTTTGTACAC+AGG | + | chr4_1:18126854-18126873 | Msa0538650:intron | 55.0% | |
| TCTACTGGGGGCTTGTACAC+AGG | + | chr4_1:18126884-18126903 | Msa0538650:intron | 55.0% | |
| CACAGGTGGCTTCTCTACAG+GGG | + | chr4_1:18126916-18126935 | Msa0538650:intron | 55.0% | |
| ACAGGTGGCTTCTCTACAGG+GGG | + | chr4_1:18126917-18126936 | Msa0538650:intron | 55.0% | |
| ACAGGGGGTTTGTAGACAGG+GGG | + | chr4_1:18126932-18126951 | Msa0538650:intron | 55.0% | |
| ACAGGGGGTTTCTCAACTGG+TGG | + | chr4_1:18126947-18126966 | Msa0538650:CDS | 55.0% | |
| ACTGGTGGCTTATACACCGG+TGG | + | chr4_1:18126962-18126981 | Msa0538650:CDS | 55.0% | |
| GTGGCTTATACACCGGTGGT+TGG | + | chr4_1:18126966-18126985 | Msa0538650:CDS | 55.0% | |
| CTACCCGAGGGAACTATGGG+TGG | + | chr4_1:18126339-18126358 | Msa0538650:exon | 60.0% | |
| CGAGGGAACTATGGGTGGTG+AGG | + | chr4_1:18126344-18126363 | Msa0538650:exon | 60.0% | |
| GGGAACTATGGGTGGTGAGG+AGG | + | chr4_1:18126347-18126366 | Msa0538650:exon | 60.0% | |
| ACTGGTGGCTTCTCGACTGG+AGG | + | chr4_1:18126377-18126396 | Msa0538650:CDS | 60.0% | |
| ACTGGGGGCTTGTAGACTGG+TGG | + | chr4_1:18126482-18126501 | Msa0538650:intron | 60.0% | |
| ! | ACTGGTGGCTTGTAGACCGG+AGG | + | chr4_1:18126497-18126516 | Msa0538650:intron | 60.0% |
| ! | ACGGGTGGCTTGTAGACTGG+AGG | + | chr4_1:18126542-18126561 | Msa0538650:intron | 60.0% |
| ! | ACAGGTGGCTTGTACACCGG+TGG | + | chr4_1:18126572-18126591 | Msa0538650:intron | 60.0% |
| ACTGGAGGCTTGTACACCGG+AGG | + | chr4_1:18126602-18126621 | Msa0538650:CDS | 60.0% | |
| ACAGGAGGCTTCTCAACGGG+TGG | + | chr4_1:18126632-18126651 | Msa0538650:CDS | 60.0% | |
| ! | ACTGGTGGCTTGTACACCGG+AGG | + | chr4_1:18126812-18126831 | Msa0538650:CDS | 60.0% |
| ACCGGGGGTTTGTACACAGG+TGG | + | chr4_1:18126857-18126876 | Msa0538650:intron | 60.0% | |
| GCCACCTGTGTACAAACCCC+CGG | - | chr4_1:18126861-18126880 | None:intergenic | 60.0% | |
| ACTGGGGGCTTGTACACAGG+TGG | + | chr4_1:18126887-18126906 | Msa0538650:intron | 60.0% | |
| !! | ACCGGTGGTTGGTAAACCGG+AGG | + | chr4_1:18126977-18126996 | Msa0538650:CDS | 60.0% |
| GCCTCCGGTTTACCAACCAC+CGG | - | chr4_1:18126981-18127000 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 18126313 | 18127058 | 18126313 | ID=Msa0538650;Name=Msa0538650 |
| chr4_1 | mRNA | 18126313 | 18127058 | 18126313 | ID=Msa0538650-mRNA-1;Parent=Msa0538650;Name=Msa0538650-mRNA-1;_AED=0.05;_eAED=0.38;_QI=41|0|0.5|1|0|0|4|27|152 |
| chr4_1 | exon | 18126313 | 18126455 | 18126313 | ID=Msa0538650-mRNA-1:exon:5358;Parent=Msa0538650-mRNA-1 |
| chr4_1 | exon | 18126576 | 18126758 | 18126576 | ID=Msa0538650-mRNA-1:exon:5359;Parent=Msa0538650-mRNA-1 |
| chr4_1 | exon | 18126771 | 18126848 | 18126771 | ID=Msa0538650-mRNA-1:exon:5360;Parent=Msa0538650-mRNA-1 |
| chr4_1 | exon | 18126936 | 18127058 | 18126936 | ID=Msa0538650-mRNA-1:exon:5361;Parent=Msa0538650-mRNA-1 |
| chr4_1 | five_prime_UTR | 18126313 | 18126353 | 18126313 | ID=Msa0538650-mRNA-1:five_prime_utr;Parent=Msa0538650-mRNA-1 |
| chr4_1 | CDS | 18126354 | 18126455 | 18126354 | ID=Msa0538650-mRNA-1:cds;Parent=Msa0538650-mRNA-1 |
| chr4_1 | CDS | 18126576 | 18126758 | 18126576 | ID=Msa0538650-mRNA-1:cds;Parent=Msa0538650-mRNA-1 |
| chr4_1 | CDS | 18126771 | 18126848 | 18126771 | ID=Msa0538650-mRNA-1:cds;Parent=Msa0538650-mRNA-1 |
| chr4_1 | CDS | 18126936 | 18127031 | 18126936 | ID=Msa0538650-mRNA-1:cds;Parent=Msa0538650-mRNA-1 |
| chr4_1 | three_prime_UTR | 18127032 | 18127058 | 18127032 | ID=Msa0538650-mRNA-1:three_prime_utr;Parent=Msa0538650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
