Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738410 | XP_003616586.1 | 100.000 | 289 | 0 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738410 | sp|P25794|PIP2_PEA | 95.502 | 289 | 13 | 0 | 1 | 289 | 1 | 289 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738410 | Q946J9 | 100.000 | 289 | 0 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0738410 | -0.803791 | 2.945131e-49 | -8.615850e-47 |
| Msa0004580 | Msa0738410 | 0.800861 | 1.181772e-48 | -8.615850e-47 |
| Msa0004590 | Msa0738410 | 0.803810 | 2.918414e-49 | -8.615850e-47 |
| Msa0032130 | Msa0738410 | 0.806763 | 7.024835e-50 | -8.615850e-47 |
| Msa0032390 | Msa0738410 | 0.800341 | 1.507940e-48 | -8.615850e-47 |
| Msa0034100 | Msa0738410 | -0.814869 | 1.236912e-51 | -8.615850e-47 |
| Msa0036550 | Msa0738410 | 0.828716 | 7.703224e-55 | -8.615850e-47 |
| Msa0045620 | Msa0738410 | 0.801193 | 1.010705e-48 | -8.615850e-47 |
| Msa0048950 | Msa0738410 | 0.811181 | 7.960413e-51 | -8.615850e-47 |
| Msa0057870 | Msa0738410 | 0.812871 | 3.408114e-51 | -8.615850e-47 |
| Msa0061590 | Msa0738410 | 0.801309 | 9.567192e-49 | -8.615850e-47 |
| Msa0069480 | Msa0738410 | 0.814943 | 1.191085e-51 | -8.615850e-47 |
| Msa0072390 | Msa0738410 | -0.842644 | 2.280425e-58 | -8.615850e-47 |
| Msa0078200 | Msa0738410 | 0.800821 | 1.204154e-48 | -8.615850e-47 |
| Msa0081790 | Msa0738410 | -0.814002 | 1.922889e-51 | -8.615850e-47 |
| Msa0114700 | Msa0738410 | -0.811567 | 6.564836e-51 | -8.615850e-47 |
| Msa0604880 | Msa0738410 | -0.800631 | 1.316308e-48 | -8.615850e-47 |
| Msa0608780 | Msa0738410 | -0.816146 | 6.428169e-52 | -8.615850e-47 |
| Msa0610780 | Msa0738410 | -0.804307 | 2.299794e-49 | -8.615850e-47 |
| Msa0610810 | Msa0738410 | -0.829106 | 6.196855e-55 | -8.615850e-47 |
| Msa0616010 | Msa0738410 | 0.800767 | 1.235148e-48 | -8.615850e-47 |
| Msa0619390 | Msa0738410 | -0.875559 | 2.801859e-68 | -8.615850e-47 |
| Msa0622190 | Msa0738410 | 0.824517 | 7.731868e-54 | -8.615850e-47 |
| Msa0623980 | Msa0738410 | 0.813706 | 2.234275e-51 | -8.615850e-47 |
| Msa0624050 | Msa0738410 | 0.804029 | 2.628484e-49 | -8.615850e-47 |
| Msa0624930 | Msa0738410 | 0.829781 | 4.248859e-55 | -8.615850e-47 |
| Msa0627050 | Msa0738410 | -0.805102 | 1.569547e-49 | -8.615850e-47 |
| Msa0627360 | Msa0738410 | 0.801532 | 8.612192e-49 | -8.615850e-47 |
| Msa0631700 | Msa0738410 | 0.811761 | 5.955164e-51 | -8.615850e-47 |
| Msa0643840 | Msa0738410 | 0.804018 | 2.642169e-49 | -8.615850e-47 |
| Msa0645060 | Msa0738410 | 0.807464 | 4.989920e-50 | -8.615850e-47 |
| Msa0645410 | Msa0738410 | -0.811319 | 7.428847e-51 | -8.615850e-47 |
| Msa0649250 | Msa0738410 | -0.835460 | 1.657122e-56 | -8.615850e-47 |
| Msa0651310 | Msa0738410 | -0.819329 | 1.229552e-52 | -8.615850e-47 |
| Msa0654880 | Msa0738410 | -0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0670360 | Msa0738410 | 0.805540 | 1.270788e-49 | -8.615850e-47 |
| Msa0671400 | Msa0738410 | 0.822500 | 2.291887e-53 | -8.615850e-47 |
| Msa0673940 | Msa0738410 | 0.812680 | 3.752859e-51 | -8.615850e-47 |
| Msa0676200 | Msa0738410 | 0.809948 | 1.470271e-50 | -8.615850e-47 |
| Msa0684560 | Msa0738410 | 0.805689 | 1.182563e-49 | -8.615850e-47 |
| Msa0693500 | Msa0738410 | -0.821973 | 3.036623e-53 | -8.615850e-47 |
| Msa0698650 | Msa0738410 | -0.814113 | 1.817612e-51 | -8.615850e-47 |
| Msa0699230 | Msa0738410 | 0.803832 | 2.888096e-49 | -8.615850e-47 |
| Msa0702360 | Msa0738410 | -0.811253 | 7.677676e-51 | -8.615850e-47 |
| Msa0702560 | Msa0738410 | -0.815300 | 9.921672e-52 | -8.615850e-47 |
| Msa0705810 | Msa0738410 | -0.851553 | 8.236829e-61 | -8.615850e-47 |
| Msa0707880 | Msa0738410 | -0.802655 | 5.061560e-49 | -8.615850e-47 |
| Msa0715510 | Msa0738410 | 0.815515 | 8.888059e-52 | -8.615850e-47 |
| Msa0716700 | Msa0738410 | 0.802414 | 5.674157e-49 | -8.615850e-47 |
| Msa0716980 | Msa0738410 | 0.801136 | 1.037969e-48 | -8.615850e-47 |
| Msa0738410 | Msa0744690 | -0.808743 | 2.665290e-50 | -8.615850e-47 |
| Msa0738410 | Msa0772420 | 0.811279 | 7.580295e-51 | -8.615850e-47 |
| Msa0738410 | Msa0784840 | 0.941067 | 7.906119e-101 | -8.615850e-47 |
| Msa0738410 | Msa0791300 | 0.812859 | 3.429854e-51 | -8.615850e-47 |
| Msa0738410 | Msa0803530 | -0.833197 | 6.123419e-56 | -8.615850e-47 |
| Msa0738410 | Msa0804170 | 0.800561 | 1.360583e-48 | -8.615850e-47 |
| Msa0738410 | Msa0817690 | 0.906206 | 1.901006e-80 | -8.615850e-47 |
| Msa0738410 | Msa0828350 | 0.815196 | 1.046618e-51 | -8.615850e-47 |
| Msa0738410 | Msa0836060 | -0.805370 | 1.379536e-49 | -8.615850e-47 |
| Msa0738410 | Msa0847140 | 0.810790 | 9.675864e-51 | -8.615850e-47 |
| Msa0738410 | Msa0855090 | 0.809045 | 2.297347e-50 | -8.615850e-47 |
| Msa0738410 | Msa0858160 | 0.835897 | 1.284418e-56 | -8.615850e-47 |
| Msa0738410 | Msa0861400 | -0.822159 | 2.749237e-53 | -8.615850e-47 |
| Msa0738410 | Msa0861820 | 0.801470 | 8.870464e-49 | -8.615850e-47 |
| Msa0738410 | Msa0864730 | -0.800596 | 1.337912e-48 | -8.615850e-47 |
| Msa0738410 | Msa0879650 | -0.809047 | 2.295478e-50 | -8.615850e-47 |
| Msa0738410 | Msa0910830 | 0.808778 | 2.620518e-50 | -8.615850e-47 |
| Msa0738410 | Msa0959850 | 0.807546 | 4.795430e-50 | -8.615850e-47 |
| Msa0738410 | Msa0967900 | -0.808942 | 2.417015e-50 | -8.615850e-47 |
| Msa0738410 | Msa1003110 | 0.809703 | 1.659458e-50 | -8.615850e-47 |
| Msa0738410 | Msa1014700 | -0.832670 | 8.279337e-56 | -8.615850e-47 |
| Msa0738410 | Msa1021620 | 0.802625 | 5.133592e-49 | -8.615850e-47 |
| Msa0738410 | Msa1031060 | 0.823040 | 1.715239e-53 | -8.615850e-47 |
| Msa0738410 | Msa1036590 | 0.806965 | 6.365584e-50 | -8.615850e-47 |
| Msa0738410 | Msa1037350 | 0.810275 | 1.249717e-50 | -8.615850e-47 |
| Msa0738410 | Msa1039730 | 0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0738410 | Msa1040330 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
| Msa0738410 | Msa1044790 | -0.807666 | 4.521816e-50 | -8.615850e-47 |
| Msa0738410 | Msa1076830 | 0.833770 | 4.407340e-56 | -8.615850e-47 |
| Msa0738410 | Msa1076900 | 0.807310 | 5.379987e-50 | -8.615850e-47 |
| Msa0738410 | Msa1078300 | 0.822331 | 2.508389e-53 | -8.615850e-47 |
| Msa0738410 | Msa1078600 | -0.824774 | 6.726010e-54 | -8.615850e-47 |
| Msa0738410 | Msa1078770 | -0.820052 | 8.407574e-53 | -8.615850e-47 |
| Msa0738410 | Msa1084800 | 0.822824 | 1.926166e-53 | -8.615850e-47 |
| Msa0738410 | Msa1109500 | -0.815488 | 9.008432e-52 | -8.615850e-47 |
| Msa0738410 | Msa1111650 | 0.806100 | 9.692682e-50 | -8.615850e-47 |
| Msa0738410 | Msa1119670 | 0.823425 | 1.394595e-53 | -8.615850e-47 |
| Msa0738410 | Msa1123010 | 0.810897 | 9.173002e-51 | -8.615850e-47 |
| Msa0738410 | Msa1133860 | 0.802584 | 5.234275e-49 | -8.615850e-47 |
| Msa0738410 | Msa1158450 | -0.800152 | 1.648216e-48 | -8.615850e-47 |
| Msa0738410 | Msa1163710 | 0.813096 | 3.043429e-51 | -8.615850e-47 |
| Msa0738410 | Msa1164240 | 0.801926 | 7.149054e-49 | -8.615850e-47 |
| Msa0738410 | Msa1169600 | -0.813973 | 1.951383e-51 | -8.615850e-47 |
| Msa0738410 | Msa1170320 | 0.812057 | 5.135269e-51 | -8.615850e-47 |
| Msa0738410 | Msa1182800 | -0.806746 | 7.083585e-50 | -8.615850e-47 |
| Msa0738410 | Msa1184010 | -0.809338 | 1.987868e-50 | -8.615850e-47 |
| Msa0738410 | Msa1190350 | -0.801632 | 8.217048e-49 | -8.615850e-47 |
| Msa0738410 | Msa1191960 | -0.809463 | 1.868492e-50 | -8.615850e-47 |
| Msa0738410 | Msa1202220 | -0.807801 | 4.233496e-50 | -8.615850e-47 |
| Msa0738410 | Msa1224820 | -0.813035 | 3.138531e-51 | -8.615850e-47 |
| Msa0738410 | Msa1225890 | 0.805080 | 1.586313e-49 | -8.615850e-47 |
| Msa0738410 | Msa1228350 | -0.809198 | 2.129913e-50 | -8.615850e-47 |
| Msa0738410 | Msa1228460 | -0.821901 | 3.155145e-53 | -8.615850e-47 |
| Msa0738410 | Msa1236860 | -0.812412 | 4.296282e-51 | -8.615850e-47 |
| Msa0738410 | Msa1255020 | -0.805052 | 1.607602e-49 | -8.615850e-47 |
| Msa0738410 | Msa1255710 | 0.804859 | 1.764380e-49 | -8.615850e-47 |
| Msa0738410 | Msa1265570 | 0.800861 | 1.181737e-48 | -8.615850e-47 |
| Msa0738410 | Msa1281130 | 0.801998 | 6.909842e-49 | -8.615850e-47 |
| Msa0738410 | Msa1286420 | 0.804589 | 2.009051e-49 | -8.615850e-47 |
| Msa0738410 | Msa1286860 | -0.801318 | 9.530323e-49 | -8.615850e-47 |
| Msa0738410 | Msa1288970 | -0.812631 | 3.847798e-51 | -8.615850e-47 |
| Msa0738410 | Msa1295470 | -0.802296 | 6.002334e-49 | -8.615850e-47 |
| Msa0738410 | Msa1297220 | -0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0738410 | Msa1304870 | 0.809802 | 1.580462e-50 | -8.615850e-47 |
| Msa0738410 | Msa1317240 | -0.816234 | 6.143452e-52 | -8.615850e-47 |
| Msa0738410 | Msa1320330 | 0.800200 | 1.611344e-48 | -8.615850e-47 |
| Msa0738410 | Msa1323260 | -0.815326 | 9.791148e-52 | -8.615850e-47 |
| Msa0738410 | Msa1338510 | 0.807791 | 4.252860e-50 | -8.615850e-47 |
| Msa0738410 | Msa1343450 | -0.808556 | 2.922220e-50 | -8.615850e-47 |
| Msa0738410 | Msa1343590 | 0.801750 | 7.769232e-49 | -8.615850e-47 |
| Msa0738410 | Msa1349810 | -0.802364 | 5.810411e-49 | -8.615850e-47 |
| Msa0738410 | Msa1359890 | -0.811814 | 5.799636e-51 | -8.615850e-47 |
| Msa0738410 | Msa1363690 | 0.837755 | 4.309144e-57 | -8.615850e-47 |
| Msa0738410 | Msa1365230 | 0.800331 | 1.515641e-48 | -8.615850e-47 |
| Msa0738410 | Msa1369180 | -0.846795 | 1.735493e-59 | -8.615850e-47 |
| Msa0738410 | Msa1371800 | 0.810590 | 1.068568e-50 | -8.615850e-47 |
| Msa0738410 | Msa1373390 | -0.812155 | 4.888629e-51 | -8.615850e-47 |
| Msa0738410 | Msa1376070 | 0.831926 | 1.265424e-55 | -8.615850e-47 |
| Msa0738410 | Msa1376310 | 0.804160 | 2.468658e-49 | -8.615850e-47 |
| Msa0738410 | Msa1377460 | 0.801294 | 9.634679e-49 | -8.615850e-47 |
| Msa0738410 | Msa1377520 | 0.806743 | 7.094293e-50 | -8.615850e-47 |
| Msa0738410 | Msa1387480 | 0.817052 | 4.026767e-52 | -8.615850e-47 |
| Msa0738410 | Msa1395720 | 0.819731 | 9.954221e-53 | -8.615850e-47 |
| Msa0738410 | Msa1396550 | 0.841645 | 4.191627e-58 | -8.615850e-47 |
| Msa0738410 | Msa1398490 | 0.811816 | 5.794146e-51 | -8.615850e-47 |
| Msa0738410 | Msa1405380 | -0.825812 | 3.821619e-54 | -8.615850e-47 |
| Msa0738410 | Msa1407670 | 0.826576 | 2.514311e-54 | -8.615850e-47 |
| Msa0738410 | Msa1413020 | 0.804015 | 2.645291e-49 | -8.615850e-47 |
| Msa0738410 | Msa1417220 | 0.818521 | 1.876739e-52 | -8.615850e-47 |
| Msa0738410 | Msa1421120 | 0.813322 | 2.713992e-51 | -8.615850e-47 |
| Msa0738410 | Msa1421130 | 0.821791 | 3.346539e-53 | -8.615850e-47 |
| Msa0738410 | Msa1421540 | 0.817308 | 3.527074e-52 | -8.615850e-47 |
| Msa0738410 | Msa1427600 | -0.826588 | 2.498498e-54 | -8.615850e-47 |
| Msa0738410 | Msa1434700 | 0.803145 | 4.009156e-49 | -8.615850e-47 |
| Msa0738410 | Msa1438510 | 0.838589 | 2.628297e-57 | -8.615850e-47 |
| Msa0738410 | Msa1449770 | 0.831178 | 1.934350e-55 | -8.615850e-47 |
| Msa0738410 | Msa1456620 | -0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0738410 | Msa1462780 | 0.805293 | 1.431627e-49 | -8.615850e-47 |
| Msa0128110 | Msa0738410 | -0.812142 | 4.919822e-51 | -8.615850e-47 |
| Msa0130710 | Msa0738410 | 0.811908 | 5.531310e-51 | -8.615850e-47 |
| Msa0135330 | Msa0738410 | 0.815309 | 9.873557e-52 | -8.615850e-47 |
| Msa0147680 | Msa0738410 | 0.824749 | 6.819767e-54 | -8.615850e-47 |
| Msa0163960 | Msa0738410 | -0.824669 | 7.119818e-54 | -8.615850e-47 |
| Msa0170760 | Msa0738410 | 0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0176600 | Msa0738410 | 0.803606 | 3.217344e-49 | -8.615850e-47 |
| Msa0177260 | Msa0738410 | 0.802511 | 5.418891e-49 | -8.615850e-47 |
| Msa0179830 | Msa0738410 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0185690 | Msa0738410 | 0.812629 | 3.851836e-51 | -8.615850e-47 |
| Msa0187980 | Msa0738410 | -0.814974 | 1.172003e-51 | -8.615850e-47 |
| Msa0210790 | Msa0738410 | 0.812292 | 4.563562e-51 | -8.615850e-47 |
| Msa0210850 | Msa0738410 | 0.822906 | 1.843048e-53 | -8.615850e-47 |
| Msa0367590 | Msa0738410 | -0.820434 | 6.873123e-53 | -8.615850e-47 |
| Msa0368620 | Msa0738410 | 0.801317 | 9.533134e-49 | -8.615850e-47 |
| Msa0392540 | Msa0738410 | -0.831855 | 1.317575e-55 | -8.615850e-47 |
| Msa0396860 | Msa0738410 | 0.837833 | 4.116329e-57 | -8.615850e-47 |
| Msa0416040 | Msa0738410 | 0.810225 | 1.281297e-50 | -8.615850e-47 |
| Msa0437790 | Msa0738410 | -0.801955 | 7.051923e-49 | -8.615850e-47 |
| Msa0440310 | Msa0738410 | -0.816366 | 5.739697e-52 | -8.615850e-47 |
| Msa0460220 | Msa0738410 | -0.804986 | 1.659904e-49 | -8.615850e-47 |
| Msa0464160 | Msa0738410 | 0.807762 | 4.314299e-50 | -8.615850e-47 |
| Msa0480260 | Msa0738410 | 0.802043 | 6.765100e-49 | -8.615850e-47 |
| Msa0251120 | Msa0738410 | 0.812189 | 4.805601e-51 | -8.615850e-47 |
| Msa0259300 | Msa0738410 | 0.803918 | 2.772056e-49 | -8.615850e-47 |
| Msa0260980 | Msa0738410 | 0.805712 | 1.169158e-49 | -8.615850e-47 |
| Msa0278480 | Msa0738410 | 0.802869 | 4.571016e-49 | -8.615850e-47 |
| Msa0303920 | Msa0738410 | 0.802120 | 6.521508e-49 | -8.615850e-47 |
| Msa0304060 | Msa0738410 | -0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0319710 | Msa0738410 | -0.802716 | 4.915284e-49 | -8.615850e-47 |
| Msa0336430 | Msa0738410 | 0.811054 | 8.480213e-51 | -8.615850e-47 |
| Msa0336520 | Msa0738410 | 0.814198 | 1.740600e-51 | -8.615850e-47 |
| Msa0491760 | Msa0738410 | 0.813554 | 2.414145e-51 | -8.615850e-47 |
| Msa0529360 | Msa0738410 | 0.820944 | 5.247198e-53 | -8.615850e-47 |
| Msa0530340 | Msa0738410 | -0.800660 | 1.298718e-48 | -8.615850e-47 |
| Msa0548210 | Msa0738410 | -0.801959 | 7.037820e-49 | -8.615850e-47 |
| Msa0549110 | Msa0738410 | -0.802636 | 5.105813e-49 | -8.615850e-47 |
| Msa0562050 | Msa0738410 | 0.805242 | 1.467068e-49 | -8.615850e-47 |
| Msa0566090 | Msa0738410 | -0.812289 | 4.570478e-51 | -8.615850e-47 |
| Msa0566460 | Msa0738410 | 0.816094 | 6.600019e-52 | -8.615850e-47 |
| Msa0576500 | Msa0738410 | -0.804148 | 2.483031e-49 | -8.615850e-47 |
| Msa0577050 | Msa0738410 | -0.880385 | 5.735859e-70 | -8.615850e-47 |
| Msa0583390 | Msa0738410 | 0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0584970 | Msa0738410 | 0.803172 | 3.957838e-49 | -8.615850e-47 |
| Msa0587180 | Msa0738410 | 0.804859 | 1.764673e-49 | -8.615850e-47 |
| Msa0587920 | Msa0738410 | 0.801346 | 9.403324e-49 | -8.615850e-47 |
| Msa0602050 | Msa0738410 | 0.800784 | 1.225214e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738410 | MtrunA17_Chr5g0436701 | 100.000 | 289 | 0 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Msa0738410 | MtrunA17_Chr3g0113211 | 93.080 | 289 | 20 | 0 | 1 | 289 | 1 | 289 | 0.0 | 550 |
| Msa0738410 | MtrunA17_Chr8g0386961 | 87.063 | 286 | 35 | 1 | 4 | 289 | 3 | 286 | 0.0 | 513 |
| Msa0738410 | MtrunA17_Chr5g0397391 | 84.615 | 286 | 42 | 1 | 4 | 289 | 3 | 286 | 1.69e-179 | 496 |
| Msa0738410 | MtrunA17_Chr4g0006001 | 81.034 | 290 | 53 | 2 | 1 | 289 | 1 | 289 | 5.03e-174 | 482 |
| Msa0738410 | MtrunA17_Chr7g0264111 | 73.256 | 258 | 62 | 2 | 32 | 283 | 16 | 272 | 3.82e-136 | 386 |
| Msa0738410 | MtrunA17_Chr1g0199731 | 71.910 | 267 | 68 | 3 | 23 | 283 | 7 | 272 | 2.80e-135 | 384 |
| Msa0738410 | MtrunA17_Chr2g0326621 | 69.318 | 264 | 73 | 2 | 32 | 288 | 17 | 279 | 2.58e-134 | 381 |
| Msa0738410 | MtrunA17_Chr3g0145671 | 71.984 | 257 | 71 | 1 | 32 | 288 | 14 | 269 | 6.61e-133 | 377 |
| Msa0738410 | MtrunA17_Chr4g0029071 | 68.382 | 272 | 79 | 3 | 23 | 288 | 7 | 277 | 5.16e-131 | 373 |
| Msa0738410 | MtrunA17_Chr6g0478191 | 39.149 | 235 | 127 | 6 | 55 | 285 | 21 | 243 | 1.44e-32 | 120 |
| Msa0738410 | MtrunA17_Chr2g0331261 | 36.364 | 231 | 132 | 5 | 50 | 277 | 15 | 233 | 1.32e-31 | 117 |
| Msa0738410 | MtrunA17_Chr1g0188771 | 37.069 | 232 | 127 | 7 | 55 | 281 | 21 | 238 | 1.61e-31 | 117 |
| Msa0738410 | MtrunA17_Chr8g0340161 | 36.910 | 233 | 130 | 6 | 50 | 277 | 12 | 232 | 1.00e-30 | 115 |
| Msa0738410 | MtrunA17_Chr5g0399341 | 35.841 | 226 | 129 | 5 | 55 | 277 | 19 | 231 | 1.10e-27 | 107 |
| Msa0738410 | MtrunA17_Chr4g0030861 | 33.333 | 237 | 143 | 5 | 44 | 277 | 10 | 234 | 4.76e-27 | 105 |
| Msa0738410 | MtrunA17_Chr1g0212671 | 33.333 | 243 | 135 | 7 | 44 | 277 | 10 | 234 | 1.40e-26 | 104 |
| Msa0738410 | MtrunA17_Chr7g0264961 | 33.878 | 245 | 141 | 8 | 45 | 283 | 11 | 240 | 2.19e-26 | 103 |
| Msa0738410 | MtrunA17_Chr1g0146161 | 35.135 | 222 | 125 | 7 | 55 | 273 | 19 | 224 | 2.24e-25 | 101 |
| Msa0738410 | MtrunA17_Chr7g0222791 | 34.052 | 232 | 126 | 7 | 55 | 277 | 21 | 234 | 5.73e-24 | 97.8 |
| Msa0738410 | MtrunA17_Chr1g0146171 | 35.345 | 232 | 119 | 10 | 55 | 277 | 19 | 228 | 6.45e-24 | 97.4 |
| Msa0738410 | MtrunA17_Chr5g0435051 | 27.481 | 262 | 159 | 6 | 25 | 275 | 2 | 243 | 1.18e-21 | 91.7 |
| Msa0738410 | MtrunA17_Chr2g0284631 | 30.093 | 216 | 129 | 6 | 58 | 270 | 94 | 290 | 1.31e-19 | 87.0 |
| Msa0738410 | MtrunA17_Chr8g0379901 | 30.126 | 239 | 144 | 8 | 53 | 287 | 37 | 256 | 1.08e-18 | 84.0 |
| Msa0738410 | MtrunA17_Chr5g0426131 | 30.131 | 229 | 143 | 7 | 50 | 277 | 32 | 244 | 1.78e-18 | 82.8 |
| Msa0738410 | MtrunA17_Chr2g0284591 | 32.407 | 216 | 124 | 6 | 58 | 270 | 39 | 235 | 2.45e-18 | 82.8 |
| Msa0738410 | MtrunA17_Chr7g0217331 | 28.139 | 231 | 143 | 7 | 53 | 280 | 35 | 245 | 4.60e-17 | 79.3 |
| Msa0738410 | MtrunA17_Chr4g0020781 | 32.474 | 194 | 105 | 6 | 90 | 277 | 18 | 191 | 6.29e-17 | 77.8 |
| Msa0738410 | MtrunA17_Chr3g0079421 | 27.803 | 223 | 142 | 4 | 58 | 277 | 25 | 231 | 7.49e-17 | 78.6 |
| Msa0738410 | MtrunA17_Chr2g0284611 | 31.674 | 221 | 129 | 6 | 53 | 270 | 36 | 237 | 8.81e-17 | 78.6 |
| Msa0738410 | MtrunA17_Chr8g0379911 | 28.448 | 232 | 143 | 8 | 52 | 279 | 35 | 247 | 1.27e-16 | 77.8 |
| Msa0738410 | MtrunA17_Chr4g0044201 | 26.923 | 234 | 137 | 7 | 58 | 287 | 38 | 241 | 1.29e-16 | 77.8 |
| Msa0738410 | MtrunA17_Chr4g0038591 | 31.183 | 186 | 107 | 7 | 102 | 272 | 95 | 274 | 3.11e-16 | 77.8 |
| Msa0738410 | MtrunA17_Chr2g0284581 | 31.019 | 216 | 127 | 7 | 58 | 270 | 41 | 237 | 4.15e-16 | 76.6 |
| Msa0738410 | MtrunA17_Chr4g0001221 | 26.923 | 234 | 143 | 7 | 37 | 270 | 68 | 273 | 1.71e-15 | 75.1 |
| Msa0738410 | MtrunA17_Chr4g0038611 | 28.889 | 180 | 115 | 4 | 102 | 270 | 32 | 209 | 6.46e-15 | 73.2 |
| Msa0738410 | MtrunA17_Chr2g0284601 | 32.995 | 197 | 110 | 7 | 78 | 270 | 11 | 189 | 7.11e-15 | 72.4 |
| Msa0738410 | MtrunA17_Chr2g0333771 | 29.167 | 216 | 128 | 7 | 59 | 270 | 84 | 278 | 2.59e-14 | 72.0 |
| Msa0738410 | MtrunA17_Chr1g0201331 | 26.667 | 225 | 147 | 6 | 59 | 282 | 78 | 285 | 7.41e-13 | 67.8 |
| Msa0738410 | MtrunA17_Chr1g0184541 | 26.667 | 225 | 146 | 6 | 52 | 275 | 59 | 265 | 2.09e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0738410 | AT4G00430.1 | 86.159 | 289 | 37 | 2 | 1 | 289 | 1 | 286 | 0.0 | 503 |
| Msa0738410 | AT2G45960.1 | 84.083 | 289 | 42 | 2 | 1 | 289 | 1 | 285 | 5.84e-179 | 494 |
| Msa0738410 | AT4G23400.1 | 85.121 | 289 | 40 | 2 | 1 | 289 | 1 | 286 | 2.19e-169 | 471 |
| Msa0738410 | AT3G61430.2 | 84.429 | 289 | 41 | 2 | 1 | 289 | 1 | 285 | 2.66e-169 | 470 |
| Msa0738410 | AT3G61430.1 | 84.429 | 289 | 41 | 2 | 1 | 289 | 1 | 285 | 2.66e-169 | 470 |
| Msa0738410 | AT1G01620.1 | 84.429 | 289 | 41 | 2 | 1 | 289 | 1 | 285 | 3.00e-168 | 468 |
| Msa0738410 | AT2G45960.2 | 83.398 | 259 | 39 | 2 | 1 | 259 | 1 | 255 | 6.19e-157 | 439 |
| Msa0738410 | AT2G45960.3 | 83.398 | 259 | 39 | 2 | 1 | 259 | 1 | 255 | 1.26e-155 | 436 |
| Msa0738410 | AT2G37180.1 | 72.243 | 263 | 66 | 3 | 32 | 288 | 14 | 275 | 2.29e-134 | 382 |
| Msa0738410 | AT2G37170.2 | 72.243 | 263 | 66 | 3 | 32 | 288 | 57 | 318 | 1.77e-133 | 381 |
| Msa0738410 | AT4G35100.1 | 72.374 | 257 | 70 | 1 | 32 | 288 | 15 | 270 | 4.07e-133 | 379 |
| Msa0738410 | AT4G35100.2 | 72.374 | 257 | 70 | 1 | 32 | 288 | 15 | 270 | 4.07e-133 | 379 |
| Msa0738410 | AT2G37170.1 | 72.243 | 263 | 66 | 3 | 32 | 288 | 14 | 275 | 4.80e-133 | 379 |
| Msa0738410 | AT3G53420.1 | 72.830 | 265 | 61 | 4 | 32 | 288 | 16 | 277 | 4.82e-133 | 379 |
| Msa0738410 | AT3G53420.2 | 72.830 | 265 | 61 | 4 | 32 | 288 | 16 | 277 | 4.82e-133 | 379 |
| Msa0738410 | AT2G16850.1 | 71.984 | 257 | 71 | 1 | 32 | 288 | 13 | 268 | 2.30e-131 | 374 |
| Msa0738410 | AT1G01620.2 | 86.916 | 214 | 27 | 1 | 76 | 289 | 1 | 213 | 4.71e-131 | 370 |
| Msa0738410 | AT3G54820.1 | 69.811 | 265 | 69 | 3 | 32 | 288 | 15 | 276 | 2.93e-130 | 371 |
| Msa0738410 | AT4G00430.2 | 82.488 | 217 | 35 | 2 | 1 | 217 | 1 | 214 | 2.26e-127 | 362 |
| Msa0738410 | AT5G60660.1 | 68.679 | 265 | 72 | 4 | 32 | 288 | 16 | 277 | 6.32e-127 | 363 |
| Msa0738410 | AT2G39010.1 | 67.300 | 263 | 79 | 2 | 32 | 288 | 15 | 276 | 2.03e-126 | 362 |
| Msa0738410 | AT2G39010.2 | 64.894 | 188 | 59 | 2 | 32 | 213 | 15 | 201 | 1.58e-81 | 245 |
| Msa0738410 | AT3G16240.1 | 37.168 | 226 | 127 | 5 | 55 | 277 | 19 | 232 | 2.05e-31 | 117 |
| Msa0738410 | AT5G47450.1 | 37.662 | 231 | 129 | 7 | 50 | 277 | 14 | 232 | 1.32e-30 | 115 |
| Msa0738410 | AT4G01470.1 | 35.593 | 236 | 137 | 5 | 45 | 277 | 11 | 234 | 3.86e-30 | 114 |
| Msa0738410 | AT1G73190.1 | 37.083 | 240 | 130 | 7 | 55 | 285 | 24 | 251 | 6.32e-30 | 114 |
| Msa0738410 | AT1G17810.1 | 35.146 | 239 | 134 | 7 | 55 | 284 | 24 | 250 | 8.82e-30 | 114 |
| Msa0738410 | AT4G17340.1 | 36.283 | 226 | 129 | 6 | 55 | 277 | 19 | 232 | 5.22e-27 | 106 |
| Msa0738410 | AT2G36830.1 | 32.389 | 247 | 136 | 8 | 44 | 279 | 10 | 236 | 1.96e-26 | 104 |
| Msa0738410 | AT3G26520.1 | 32.231 | 242 | 137 | 7 | 42 | 277 | 15 | 235 | 1.14e-25 | 102 |
| Msa0738410 | AT2G25810.1 | 35.652 | 230 | 130 | 7 | 55 | 281 | 19 | 233 | 7.08e-24 | 97.8 |
| Msa0738410 | AT3G47440.1 | 31.687 | 243 | 135 | 8 | 50 | 281 | 18 | 240 | 1.28e-22 | 94.4 |
| Msa0738410 | AT1G31885.1 | 29.150 | 247 | 154 | 6 | 26 | 270 | 22 | 249 | 6.76e-20 | 88.2 |
| Msa0738410 | AT4G19030.1 | 27.985 | 268 | 175 | 7 | 26 | 288 | 26 | 280 | 3.93e-19 | 85.9 |
| Msa0738410 | AT5G37820.2 | 29.032 | 217 | 128 | 7 | 58 | 269 | 82 | 277 | 2.39e-16 | 78.2 |
| Msa0738410 | AT5G37820.1 | 29.032 | 217 | 128 | 7 | 58 | 269 | 46 | 241 | 2.52e-16 | 77.8 |
| Msa0738410 | AT1G31885.2 | 29.082 | 196 | 129 | 4 | 77 | 270 | 8 | 195 | 5.84e-16 | 76.6 |
| Msa0738410 | AT4G18910.1 | 27.509 | 269 | 175 | 8 | 26 | 287 | 21 | 276 | 7.56e-16 | 76.6 |
| Msa0738410 | AT2G34390.1 | 26.071 | 280 | 178 | 9 | 6 | 277 | 2 | 260 | 1.83e-15 | 75.5 |
| Msa0738410 | AT4G10380.1 | 24.901 | 253 | 158 | 6 | 33 | 270 | 41 | 276 | 1.80e-12 | 67.0 |
| Msa0738410 | AT5G37810.1 | 27.189 | 217 | 132 | 7 | 58 | 269 | 46 | 241 | 1.98e-12 | 66.6 |
| Msa0738410 | AT1G80760.1 | 25.301 | 249 | 166 | 6 | 32 | 280 | 60 | 288 | 2.55e-12 | 66.6 |
| Msa0738410 | AT2G34390.2 | 26.667 | 225 | 145 | 7 | 58 | 277 | 9 | 218 | 4.11e-12 | 65.1 |
Find 93 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCCAAGTGGTTGTCTTTC+TGG | 0.098743 | 5_1:-56175235 | None:intergenic |
| CAAGGAATTGCTTGGGCTTT+TGG | 0.147648 | 5_1:+56175460 | Msa0738410:CDS |
| TATTCTTGCAGTGGATCTTC+TGG | 0.169058 | 5_1:+56176802 | Msa0738410:intron |
| TTAATACCAGTTCCAGTAAT+TGG | 0.193062 | 5_1:-56176611 | None:intergenic |
| TTCTGGGTGGGACCATTTAT+TGG | 0.238352 | 5_1:+56176819 | Msa0738410:CDS |
| TTTGAAGGAAAGACAAGATT+TGG | 0.252728 | 5_1:+56176247 | Msa0738410:CDS |
| GTAATATTATTATGATTATT+AGG | 0.257660 | 5_1:+56177016 | Msa0738410:three_prime_UTR |
| CGCTGTGTTCTTGGTTCACT+TGG | 0.261822 | 5_1:+56176580 | Msa0738410:CDS |
| GCAAGAGCTGCTCCAATAAA+TGG | 0.306781 | 5_1:-56176831 | None:intergenic |
| AATTGGGTTCGCTGTGTTCT+TGG | 0.323972 | 5_1:+56176571 | Msa0738410:CDS |
| AAACAGTGATATAAAGAAAA+AGG | 0.328096 | 5_1:-56175384 | None:intergenic |
| GGTGGCTCTTGATAATCCTT+AGG | 0.333527 | 5_1:-56175280 | None:intergenic |
| TCCCAAGTGGTTGTCTTTCT+GGG | 0.348961 | 5_1:-56175234 | None:intergenic |
| CTACATGGTGATGCAATGTT+TGG | 0.359716 | 5_1:+56176192 | Msa0738410:CDS |
| AGCCATCTGAACTGACTTCA+TGG | 0.369669 | 5_1:+56175320 | Msa0738410:CDS |
| AAAGAACAGGATGTGTCTTT+AGG | 0.370646 | 5_1:+56175199 | Msa0738410:CDS |
| ATTCTTGCAGTGGATCTTCT+GGG | 0.373293 | 5_1:+56176803 | Msa0738410:intron |
| TCAAAAGCATAGGAAAATTT+AGG | 0.380309 | 5_1:-56177062 | None:intergenic |
| TAAATCCAGCAGTGACATTT+GGG | 0.385302 | 5_1:+56176128 | Msa0738410:CDS |
| ATAAATCCAGCAGTGACATT+TGG | 0.387473 | 5_1:+56176127 | Msa0738410:CDS |
| TACTGTACTGCTGGAATCTC+AGG | 0.389203 | 5_1:+56175505 | Msa0738410:CDS |
| TTGGGTGCTATTTGTGGTGC+TGG | 0.389900 | 5_1:+56176211 | Msa0738410:CDS |
| TTGTCTTTCTGGGAATTTGT+TGG | 0.391781 | 5_1:-56175224 | None:intergenic |
| TTGGCCACTATCCCAATTAC+TGG | 0.392883 | 5_1:+56176599 | Msa0738410:CDS |
| GCTCTTGTTTACTGTACTGC+TGG | 0.392947 | 5_1:+56175496 | Msa0738410:CDS |
| CATGAATCATGATAGTGTTA+AGG | 0.397274 | 5_1:-56177188 | None:intergenic |
| CAATGTTTGGGTGCTATTTG+TGG | 0.409953 | 5_1:+56176205 | Msa0738410:CDS |
| TAATACCAGTTCCAGTAATT+GGG | 0.410603 | 5_1:-56176610 | None:intergenic |
| GGGGATTCAAGGAATTGCTT+GGG | 0.411864 | 5_1:+56175453 | Msa0738410:CDS |
| GATAATCCTTAGGGTCATCT+TGG | 0.412241 | 5_1:-56175270 | None:intergenic |
| TGTAAGACTGTGGGGATTCA+AGG | 0.414562 | 5_1:+56175442 | Msa0738410:CDS |
| TGTAGCATGTGTGTGTGTTA+TGG | 0.420645 | 5_1:+56177039 | Msa0738410:three_prime_UTR |
| ACTATCCCAATTACTGGAAC+TGG | 0.426227 | 5_1:+56176605 | Msa0738410:CDS |
| GGTGCCAACTTTGTTGCTCC+TGG | 0.427799 | 5_1:+56176283 | Msa0738410:CDS |
| ATTTGATCACTTAGACTTGA+AGG | 0.433397 | 5_1:-56176889 | None:intergenic |
| AGCACCAAGACCATCACCTT+TGG | 0.435976 | 5_1:-56176311 | None:intergenic |
| TCATGGTCTTTCTACAGAGC+TGG | 0.438821 | 5_1:+56175337 | Msa0738410:CDS |
| TGGGGATTCAAGGAATTGCT+TGG | 0.444258 | 5_1:+56175452 | Msa0738410:CDS |
| ATGAATCATGATAGTGTTAA+GGG | 0.445539 | 5_1:-56177187 | None:intergenic |
| TCCAGCTCGTGTGTGATGTA+CGG | 0.451169 | 5_1:+56177101 | Msa0738410:three_prime_UTR |
| CTTCAACAAGGACCTTGGTT+GGG | 0.451717 | 5_1:+56176664 | Msa0738410:CDS |
| TACATGGTGATGCAATGTTT+GGG | 0.464448 | 5_1:+56176193 | Msa0738410:CDS |
| GTGGCTCTTGATAATCCTTA+GGG | 0.475436 | 5_1:-56175279 | None:intergenic |
| ATTAACCCTGCTCGTAGTCT+TGG | 0.478309 | 5_1:+56176629 | Msa0738410:CDS |
| TGTGGTGCTGGTGTTGTGAA+AGG | 0.479519 | 5_1:+56176223 | Msa0738410:CDS |
| TCAAACAACGGTGCTGGTGG+TGG | 0.481920 | 5_1:-56175298 | None:intergenic |
| AATAGCCCAAATGTCACTGC+TGG | 0.486149 | 5_1:-56176133 | None:intergenic |
| GGTCTTGGTGCTGAAATTGT+TGG | 0.490732 | 5_1:+56176322 | Msa0738410:CDS |
| TACGGGAACATGAGAGTCTC+TGG | 0.492319 | 5_1:-56176398 | None:intergenic |
| TCTTCAACAAGGACCTTGGT+TGG | 0.493563 | 5_1:+56176663 | Msa0738410:CDS |
| AAGAACACAGCGAACCCAAT+TGG | 0.494251 | 5_1:-56176569 | None:intergenic |
| ATCAATCAAGACATGTTTGT+GGG | 0.494409 | 5_1:+56176925 | Msa0738410:three_prime_UTR |
| CCCGTACATCACACACGAGC+TGG | 0.495054 | 5_1:-56177102 | None:intergenic |
| CCAGCTCGTGTGTGATGTAC+GGG | 0.499990 | 5_1:+56177102 | Msa0738410:three_prime_UTR |
| GATGGCTCAAACAACGGTGC+TGG | 0.510215 | 5_1:-56175304 | None:intergenic |
| AGTTCCAGTAATTGGGATAG+TGG | 0.513529 | 5_1:-56176603 | None:intergenic |
| AGTTCAGATGGCTCAAACAA+CGG | 0.521397 | 5_1:-56175310 | None:intergenic |
| ATTATCTTCAACAAGGACCT+TGG | 0.525491 | 5_1:+56176659 | Msa0738410:CDS |
| GACCATGAAGTCAGTTCAGA+TGG | 0.532853 | 5_1:-56175322 | None:intergenic |
| TTGCAGTGGATCTTCTGGGT+GGG | 0.533501 | 5_1:+56176807 | Msa0738410:intron |
| GTCTAAGTGATCAAATCAAA+CGG | 0.537584 | 5_1:+56176896 | Msa0738410:exon |
| CATGGTCTTTCTACAGAGCT+GGG | 0.538255 | 5_1:+56175338 | Msa0738410:CDS |
| GTTGCTCCTGGTTACACCAA+AGG | 0.542015 | 5_1:+56176295 | Msa0738410:CDS |
| TCACTTAGACTTGAAGGGAA+TGG | 0.553226 | 5_1:-56176883 | None:intergenic |
| TACACCAAAGGTGATGGTCT+TGG | 0.554514 | 5_1:+56176307 | Msa0738410:CDS |
| GATTCTAAGTGTAAGACTGT+GGG | 0.554986 | 5_1:+56175433 | Msa0738410:CDS |
| TTTGATCACTTAGACTTGAA+GGG | 0.559600 | 5_1:-56176888 | None:intergenic |
| CCTGGTTACACCAAAGGTGA+TGG | 0.563447 | 5_1:+56176301 | Msa0738410:CDS |
| GATCAATCAAGACATGTTTG+TGG | 0.564316 | 5_1:+56176924 | Msa0738410:three_prime_UTR |
| CCATCACCTTTGGTGTAACC+AGG | 0.566415 | 5_1:-56176301 | None:intergenic |
| AGCATCGGTGGCTGAGAAGA+CGG | 0.570780 | 5_1:-56176365 | None:intergenic |
| GACAAGAGCATTGTTCTACA+TGG | 0.572416 | 5_1:+56176177 | Msa0738410:CDS |
| GGCGCTACGTTTAGCATCGG+TGG | 0.574723 | 5_1:-56176377 | None:intergenic |
| TATTTCCAACTCAAAAGCAT+AGG | 0.579075 | 5_1:-56177072 | None:intergenic |
| GCAGCACCAAGACTACGAGC+AGG | 0.585086 | 5_1:-56176635 | None:intergenic |
| TCAAAGCCAAGATGACCCTA+AGG | 0.594414 | 5_1:+56175264 | Msa0738410:CDS |
| TCCCAGAAAGACAACCACTT+GGG | 0.597140 | 5_1:+56175233 | Msa0738410:CDS |
| CTTGCAGTGGATCTTCTGGG+TGG | 0.604626 | 5_1:+56176806 | Msa0738410:intron |
| ACAAGATTTGGAGATCTGAA+AGG | 0.612306 | 5_1:+56176259 | Msa0738410:CDS |
| CTTTGAGCTGCAATCCCAAG+TGG | 0.615951 | 5_1:-56175247 | None:intergenic |
| TTCCCAGAAAGACAACCACT+TGG | 0.616137 | 5_1:+56175232 | Msa0738410:CDS |
| GGCTCAAACAACGGTGCTGG+TGG | 0.625378 | 5_1:-56175301 | None:intergenic |
| TGATTCTAAGTGTAAGACTG+TGG | 0.635046 | 5_1:+56175432 | Msa0738410:CDS |
| GTAACCAGGAGCAACAAAGT+TGG | 0.636963 | 5_1:-56176287 | None:intergenic |
| ACAGCGAACCCAATTGGCAA+TGG | 0.642498 | 5_1:-56176563 | None:intergenic |
| TGCTGCTATTATCTTCAACA+AGG | 0.649253 | 5_1:+56176652 | Msa0738410:CDS |
| ATTCTAAGTGTAAGACTGTG+GGG | 0.650236 | 5_1:+56175434 | Msa0738410:CDS |
| TCTGGCGCTACGTTTAGCAT+CGG | 0.662595 | 5_1:-56176380 | None:intergenic |
| CAGCACCAAGACTACGAGCA+GGG | 0.662928 | 5_1:-56176634 | None:intergenic |
| AGATTTGGAGATCTGAAAGG+TGG | 0.676833 | 5_1:+56176262 | Msa0738410:CDS |
| TTACGTGATCATCCCAACCA+AGG | 0.707418 | 5_1:-56176676 | None:intergenic |
| TGGCTCTGATTACGACCACG+TGG | 0.762119 | 5_1:-56176863 | None:intergenic |
| TCTTGCAGCACTCTACCACG+TGG | 0.776974 | 5_1:+56176848 | Msa0738410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTATTTTTCTGTTAT+AGG | + | chr5_1:56175629-56175648 | Msa0738410:intron | 10.0% |
| !! | GTAATATTATTATGATTATT+AGG | + | chr5_1:56177016-56177035 | Msa0738410:three_prime_UTR | 10.0% |
| !!! | AATTTTTATTTTTCTGTTAT+AGG | + | chr5_1:56175629-56175648 | Msa0738410:intron | 10.0% |
| !! | GTAATATTATTATGATTATT+AGG | + | chr5_1:56177016-56177035 | Msa0738410:three_prime_UTR | 10.0% |
| !!! | TTAGTACTTATAATTTTTGA+AGG | + | chr5_1:56175582-56175601 | Msa0738410:intron | 15.0% |
| !! | GTCAAATGTTTATAATAATT+CGG | - | chr5_1:56176454-56176473 | None:intergenic | 15.0% |
| !!! | TTTATTTTATGAGTAGATTT+TGG | + | chr5_1:56176538-56176557 | Msa0738410:intron | 15.0% |
| !!! | TTAGTACTTATAATTTTTGA+AGG | + | chr5_1:56175582-56175601 | Msa0738410:intron | 15.0% |
| !! | GTCAAATGTTTATAATAATT+CGG | - | chr5_1:56176454-56176473 | None:intergenic | 15.0% |
| !!! | TTTATTTTATGAGTAGATTT+TGG | + | chr5_1:56176538-56176557 | Msa0738410:intron | 15.0% |
| !! | AAACAGTGATATAAAGAAAA+AGG | - | chr5_1:56175387-56175406 | None:intergenic | 20.0% |
| !!! | TACATATATGTTGCTATTTA+AGG | - | chr5_1:56175551-56175570 | None:intergenic | 20.0% |
| !!! | ACTAAATTTAGTTTTTCCTA+TGG | + | chr5_1:56175652-56175671 | Msa0738410:intron | 20.0% |
| !! | TACATAAATTTCATTCAAAC+TGG | - | chr5_1:56175679-56175698 | None:intergenic | 20.0% |
| !!! | TCTAAGAAAGTGTAATTATA+TGG | + | chr5_1:56175708-56175727 | Msa0738410:intron | 20.0% |
| !!! | TATATTAGTAGTTTTTTGTG+TGG | + | chr5_1:56175846-56175865 | Msa0738410:intron | 20.0% |
| !! | TTAATTTATTATTCTTGCAG+TGG | + | chr5_1:56176793-56176812 | Msa0738410:intron | 20.0% |
| !! | AAACAGTGATATAAAGAAAA+AGG | - | chr5_1:56175387-56175406 | None:intergenic | 20.0% |
| !!! | TACATATATGTTGCTATTTA+AGG | - | chr5_1:56175551-56175570 | None:intergenic | 20.0% |
| !!! | ACTAAATTTAGTTTTTCCTA+TGG | + | chr5_1:56175652-56175671 | Msa0738410:intron | 20.0% |
| !! | TACATAAATTTCATTCAAAC+TGG | - | chr5_1:56175679-56175698 | None:intergenic | 20.0% |
| !!! | TCTAAGAAAGTGTAATTATA+TGG | + | chr5_1:56175708-56175727 | Msa0738410:intron | 20.0% |
| !!! | TATATTAGTAGTTTTTTGTG+TGG | + | chr5_1:56175846-56175865 | Msa0738410:intron | 20.0% |
| !! | TTAATTTATTATTCTTGCAG+TGG | + | chr5_1:56176793-56176812 | Msa0738410:intron | 20.0% |
| ! | TTATGAATATGTCCTTATCA+TGG | - | chr5_1:56175958-56175977 | None:intergenic | 25.0% |
| !! | CTGTCTTTTATTAGTCAATT+TGG | + | chr5_1:56176069-56176088 | Msa0738410:intron | 25.0% |
| !!! | TTTTTTGAAGGAAAAGGAAA+AGG | - | chr5_1:56176968-56176987 | None:intergenic | 25.0% |
| !!! | ACTTGATTTTTTGAAGGAAA+AGG | - | chr5_1:56176974-56176993 | None:intergenic | 25.0% |
| !!! | TACAACACTTGATTTTTTGA+AGG | - | chr5_1:56176980-56176999 | None:intergenic | 25.0% |
| !! | TCAAAAGCATAGGAAAATTT+AGG | - | chr5_1:56177065-56177084 | None:intergenic | 25.0% |
| !!! | CTTGAGTGTTATTTTAGATT+TGG | - | chr5_1:56177145-56177164 | None:intergenic | 25.0% |
| !! | ATGAATCATGATAGTGTTAA+GGG | - | chr5_1:56177190-56177209 | None:intergenic | 25.0% |
| ! | TTATGAATATGTCCTTATCA+TGG | - | chr5_1:56175958-56175977 | None:intergenic | 25.0% |
| !! | CTGTCTTTTATTAGTCAATT+TGG | + | chr5_1:56176069-56176088 | Msa0738410:intron | 25.0% |
| !!! | TTTTTTGAAGGAAAAGGAAA+AGG | - | chr5_1:56176968-56176987 | None:intergenic | 25.0% |
| !!! | ACTTGATTTTTTGAAGGAAA+AGG | - | chr5_1:56176974-56176993 | None:intergenic | 25.0% |
| !!! | TACAACACTTGATTTTTTGA+AGG | - | chr5_1:56176980-56176999 | None:intergenic | 25.0% |
| !! | TCAAAAGCATAGGAAAATTT+AGG | - | chr5_1:56177065-56177084 | None:intergenic | 25.0% |
| !!! | CTTGAGTGTTATTTTAGATT+TGG | - | chr5_1:56177145-56177164 | None:intergenic | 25.0% |
| !! | ATGAATCATGATAGTGTTAA+GGG | - | chr5_1:56177190-56177209 | None:intergenic | 25.0% |
| AAAAATGGAAGCTAAAGAAC+AGG | + | chr5_1:56175186-56175205 | Msa0738410:exon | 30.0% | |
| !!! | TATCACTGTTTTGACTGTTA+TGG | + | chr5_1:56175396-56175415 | Msa0738410:CDS | 30.0% |
| !!! | ATCACTGTTTTGACTGTTAT+GGG | + | chr5_1:56175397-56175416 | Msa0738410:CDS | 30.0% |
| AAGTAACAACTACCATGATA+AGG | + | chr5_1:56175943-56175962 | Msa0738410:intron | 30.0% | |
| TTTGAAGGAAAGACAAGATT+TGG | + | chr5_1:56176247-56176266 | Msa0738410:CDS | 30.0% | |
| TAATACCAGTTCCAGTAATT+GGG | - | chr5_1:56176613-56176632 | None:intergenic | 30.0% | |
| TTAATACCAGTTCCAGTAAT+TGG | - | chr5_1:56176614-56176633 | None:intergenic | 30.0% | |
| TTTGATCACTTAGACTTGAA+GGG | - | chr5_1:56176891-56176910 | None:intergenic | 30.0% | |
| ATTTGATCACTTAGACTTGA+AGG | - | chr5_1:56176892-56176911 | None:intergenic | 30.0% | |
| GTCTAAGTGATCAAATCAAA+CGG | + | chr5_1:56176896-56176915 | Msa0738410:exon | 30.0% | |
| ATCAATCAAGACATGTTTGT+GGG | + | chr5_1:56176925-56176944 | Msa0738410:three_prime_UTR | 30.0% | |
| !! | ATTTTCCTATGCTTTTGAGT+TGG | + | chr5_1:56177067-56177086 | Msa0738410:three_prime_UTR | 30.0% |
| ! | TATTTCCAACTCAAAAGCAT+AGG | - | chr5_1:56177075-56177094 | None:intergenic | 30.0% |
| !!! | TGCTTTTGAGTTGGAAATAA+TGG | + | chr5_1:56177076-56177095 | Msa0738410:three_prime_UTR | 30.0% |
| !!! | GCTTTTGAGTTGGAAATAAT+GGG | + | chr5_1:56177077-56177096 | Msa0738410:three_prime_UTR | 30.0% |
| !!! | CTTTTGAGTTGGAAATAATG+GGG | + | chr5_1:56177078-56177097 | Msa0738410:three_prime_UTR | 30.0% |
| ! | CATGAATCATGATAGTGTTA+AGG | - | chr5_1:56177191-56177210 | None:intergenic | 30.0% |
| AAAAATGGAAGCTAAAGAAC+AGG | + | chr5_1:56175186-56175205 | Msa0738410:exon | 30.0% | |
| !!! | TATCACTGTTTTGACTGTTA+TGG | + | chr5_1:56175396-56175415 | Msa0738410:CDS | 30.0% |
| !!! | ATCACTGTTTTGACTGTTAT+GGG | + | chr5_1:56175397-56175416 | Msa0738410:CDS | 30.0% |
| AAGTAACAACTACCATGATA+AGG | + | chr5_1:56175943-56175962 | Msa0738410:intron | 30.0% | |
| TTTGAAGGAAAGACAAGATT+TGG | + | chr5_1:56176247-56176266 | Msa0738410:CDS | 30.0% | |
| TAATACCAGTTCCAGTAATT+GGG | - | chr5_1:56176613-56176632 | None:intergenic | 30.0% | |
| TTAATACCAGTTCCAGTAAT+TGG | - | chr5_1:56176614-56176633 | None:intergenic | 30.0% | |
| TTTGATCACTTAGACTTGAA+GGG | - | chr5_1:56176891-56176910 | None:intergenic | 30.0% | |
| ATTTGATCACTTAGACTTGA+AGG | - | chr5_1:56176892-56176911 | None:intergenic | 30.0% | |
| GTCTAAGTGATCAAATCAAA+CGG | + | chr5_1:56176896-56176915 | Msa0738410:exon | 30.0% | |
| ATCAATCAAGACATGTTTGT+GGG | + | chr5_1:56176925-56176944 | Msa0738410:three_prime_UTR | 30.0% | |
| !! | ATTTTCCTATGCTTTTGAGT+TGG | + | chr5_1:56177067-56177086 | Msa0738410:three_prime_UTR | 30.0% |
| ! | TATTTCCAACTCAAAAGCAT+AGG | - | chr5_1:56177075-56177094 | None:intergenic | 30.0% |
| !!! | TGCTTTTGAGTTGGAAATAA+TGG | + | chr5_1:56177076-56177095 | Msa0738410:three_prime_UTR | 30.0% |
| !!! | GCTTTTGAGTTGGAAATAAT+GGG | + | chr5_1:56177077-56177096 | Msa0738410:three_prime_UTR | 30.0% |
| !!! | CTTTTGAGTTGGAAATAATG+GGG | + | chr5_1:56177078-56177097 | Msa0738410:three_prime_UTR | 30.0% |
| ! | CATGAATCATGATAGTGTTA+AGG | - | chr5_1:56177191-56177210 | None:intergenic | 30.0% |
| !!! | AGGTTTGTGTTTTTGGATTG+AGG | - | chr5_1:56175160-56175179 | None:intergenic | 35.0% |
| CAATCCAAAAACACAAACCT+AGG | + | chr5_1:56175160-56175179 | Msa0738410:five_prime_UTR | 35.0% | |
| ! | TGTTCCTAGGTTTGTGTTTT+TGG | - | chr5_1:56175167-56175186 | None:intergenic | 35.0% |
| CACAAACCTAGGAACAAAAA+TGG | + | chr5_1:56175171-56175190 | Msa0738410:exon | 35.0% | |
| !! | TAGCTTCCATTTTTGTTCCT+AGG | - | chr5_1:56175180-56175199 | None:intergenic | 35.0% |
| AAAGAACAGGATGTGTCTTT+AGG | + | chr5_1:56175199-56175218 | Msa0738410:CDS | 35.0% | |
| ! | TTGTCTTTCTGGGAATTTGT+TGG | - | chr5_1:56175227-56175246 | None:intergenic | 35.0% |
| TGATTCTAAGTGTAAGACTG+TGG | + | chr5_1:56175432-56175451 | Msa0738410:CDS | 35.0% | |
| GATTCTAAGTGTAAGACTGT+GGG | + | chr5_1:56175433-56175452 | Msa0738410:CDS | 35.0% | |
| ATTCTAAGTGTAAGACTGTG+GGG | + | chr5_1:56175434-56175453 | Msa0738410:CDS | 35.0% | |
| TTTCATTCAAACTGGTCCAT+AGG | - | chr5_1:56175671-56175690 | None:intergenic | 35.0% | |
| ! | GTATCGATCTAACGTTAGTT+TGG | + | chr5_1:56176037-56176056 | Msa0738410:intron | 35.0% |
| ATAAATCCAGCAGTGACATT+TGG | + | chr5_1:56176127-56176146 | Msa0738410:CDS | 35.0% | |
| TAAATCCAGCAGTGACATTT+GGG | + | chr5_1:56176128-56176147 | Msa0738410:CDS | 35.0% | |
| !! | AGTGACATTTGGGCTATTTT+TGG | + | chr5_1:56176138-56176157 | Msa0738410:CDS | 35.0% |
| ! | TACATGGTGATGCAATGTTT+GGG | + | chr5_1:56176193-56176212 | Msa0738410:CDS | 35.0% |
| ACAAGATTTGGAGATCTGAA+AGG | + | chr5_1:56176259-56176278 | Msa0738410:CDS | 35.0% | |
| ACAGTGTAAAAGAGACTTAC+GGG | - | chr5_1:56176418-56176437 | None:intergenic | 35.0% | |
| GACAGTGTAAAAGAGACTTA+CGG | - | chr5_1:56176419-56176438 | None:intergenic | 35.0% | |
| TGCTGCTATTATCTTCAACA+AGG | + | chr5_1:56176652-56176671 | Msa0738410:CDS | 35.0% | |
| ATTATCTTCAACAAGGACCT+TGG | + | chr5_1:56176659-56176678 | Msa0738410:CDS | 35.0% | |
| GATCAATCAAGACATGTTTG+TGG | + | chr5_1:56176924-56176943 | Msa0738410:three_prime_UTR | 35.0% | |
| !!! | AGGTTTGTGTTTTTGGATTG+AGG | - | chr5_1:56175160-56175179 | None:intergenic | 35.0% |
| CAATCCAAAAACACAAACCT+AGG | + | chr5_1:56175160-56175179 | Msa0738410:five_prime_UTR | 35.0% | |
| ! | TGTTCCTAGGTTTGTGTTTT+TGG | - | chr5_1:56175167-56175186 | None:intergenic | 35.0% |
| CACAAACCTAGGAACAAAAA+TGG | + | chr5_1:56175171-56175190 | Msa0738410:exon | 35.0% | |
| !! | TAGCTTCCATTTTTGTTCCT+AGG | - | chr5_1:56175180-56175199 | None:intergenic | 35.0% |
| AAAGAACAGGATGTGTCTTT+AGG | + | chr5_1:56175199-56175218 | Msa0738410:CDS | 35.0% | |
| ! | TTGTCTTTCTGGGAATTTGT+TGG | - | chr5_1:56175227-56175246 | None:intergenic | 35.0% |
| TGATTCTAAGTGTAAGACTG+TGG | + | chr5_1:56175432-56175451 | Msa0738410:CDS | 35.0% | |
| GATTCTAAGTGTAAGACTGT+GGG | + | chr5_1:56175433-56175452 | Msa0738410:CDS | 35.0% | |
| ATTCTAAGTGTAAGACTGTG+GGG | + | chr5_1:56175434-56175453 | Msa0738410:CDS | 35.0% | |
| TTTCATTCAAACTGGTCCAT+AGG | - | chr5_1:56175671-56175690 | None:intergenic | 35.0% | |
| ! | GTATCGATCTAACGTTAGTT+TGG | + | chr5_1:56176037-56176056 | Msa0738410:intron | 35.0% |
| ATAAATCCAGCAGTGACATT+TGG | + | chr5_1:56176127-56176146 | Msa0738410:CDS | 35.0% | |
| TAAATCCAGCAGTGACATTT+GGG | + | chr5_1:56176128-56176147 | Msa0738410:CDS | 35.0% | |
| !! | AGTGACATTTGGGCTATTTT+TGG | + | chr5_1:56176138-56176157 | Msa0738410:CDS | 35.0% |
| ! | TACATGGTGATGCAATGTTT+GGG | + | chr5_1:56176193-56176212 | Msa0738410:CDS | 35.0% |
| ACAAGATTTGGAGATCTGAA+AGG | + | chr5_1:56176259-56176278 | Msa0738410:CDS | 35.0% | |
| ACAGTGTAAAAGAGACTTAC+GGG | - | chr5_1:56176418-56176437 | None:intergenic | 35.0% | |
| GACAGTGTAAAAGAGACTTA+CGG | - | chr5_1:56176419-56176438 | None:intergenic | 35.0% | |
| TGCTGCTATTATCTTCAACA+AGG | + | chr5_1:56176652-56176671 | Msa0738410:CDS | 35.0% | |
| ATTATCTTCAACAAGGACCT+TGG | + | chr5_1:56176659-56176678 | Msa0738410:CDS | 35.0% | |
| GATCAATCAAGACATGTTTG+TGG | + | chr5_1:56176924-56176943 | Msa0738410:three_prime_UTR | 35.0% | |
| GATAATCCTTAGGGTCATCT+TGG | - | chr5_1:56175273-56175292 | None:intergenic | 40.0% | |
| ! | GTGGCTCTTGATAATCCTTA+GGG | - | chr5_1:56175282-56175301 | None:intergenic | 40.0% |
| AGTTCAGATGGCTCAAACAA+CGG | - | chr5_1:56175313-56175332 | None:intergenic | 40.0% | |
| AATTGCATACTGTGTGATGC+AGG | + | chr5_1:56176097-56176116 | Msa0738410:intron | 40.0% | |
| !! | GACAAGAGCATTGTTCTACA+TGG | + | chr5_1:56176177-56176196 | Msa0738410:CDS | 40.0% |
| ! | CTACATGGTGATGCAATGTT+TGG | + | chr5_1:56176192-56176211 | Msa0738410:CDS | 40.0% |
| !! | CAATGTTTGGGTGCTATTTG+TGG | + | chr5_1:56176205-56176224 | Msa0738410:CDS | 40.0% |
| !! | GGTGTTGTGAAAGGTTTTGA+AGG | + | chr5_1:56176232-56176251 | Msa0738410:CDS | 40.0% |
| AGATTTGGAGATCTGAAAGG+TGG | + | chr5_1:56176262-56176281 | Msa0738410:CDS | 40.0% | |
| !! | ATTTTGGCACCATTGCCAAT+TGG | + | chr5_1:56176554-56176573 | Msa0738410:CDS | 40.0% |
| ! | TTTTGGCACCATTGCCAATT+GGG | + | chr5_1:56176555-56176574 | Msa0738410:CDS | 40.0% |
| AGTTCCAGTAATTGGGATAG+TGG | - | chr5_1:56176606-56176625 | None:intergenic | 40.0% | |
| ACTATCCCAATTACTGGAAC+TGG | + | chr5_1:56176605-56176624 | Msa0738410:CDS | 40.0% | |
| TATTCTTGCAGTGGATCTTC+TGG | + | chr5_1:56176802-56176821 | Msa0738410:intron | 40.0% | |
| ATTCTTGCAGTGGATCTTCT+GGG | + | chr5_1:56176803-56176822 | Msa0738410:intron | 40.0% | |
| TCACTTAGACTTGAAGGGAA+TGG | - | chr5_1:56176886-56176905 | None:intergenic | 40.0% | |
| TGTAGCATGTGTGTGTGTTA+TGG | + | chr5_1:56177039-56177058 | Msa0738410:three_prime_UTR | 40.0% | |
| GATAATCCTTAGGGTCATCT+TGG | - | chr5_1:56175273-56175292 | None:intergenic | 40.0% | |
| ! | GTGGCTCTTGATAATCCTTA+GGG | - | chr5_1:56175282-56175301 | None:intergenic | 40.0% |
| AGTTCAGATGGCTCAAACAA+CGG | - | chr5_1:56175313-56175332 | None:intergenic | 40.0% | |
| AATTGCATACTGTGTGATGC+AGG | + | chr5_1:56176097-56176116 | Msa0738410:intron | 40.0% | |
| !! | GACAAGAGCATTGTTCTACA+TGG | + | chr5_1:56176177-56176196 | Msa0738410:CDS | 40.0% |
| ! | CTACATGGTGATGCAATGTT+TGG | + | chr5_1:56176192-56176211 | Msa0738410:CDS | 40.0% |
| !! | CAATGTTTGGGTGCTATTTG+TGG | + | chr5_1:56176205-56176224 | Msa0738410:CDS | 40.0% |
| !! | GGTGTTGTGAAAGGTTTTGA+AGG | + | chr5_1:56176232-56176251 | Msa0738410:CDS | 40.0% |
| AGATTTGGAGATCTGAAAGG+TGG | + | chr5_1:56176262-56176281 | Msa0738410:CDS | 40.0% | |
| !! | ATTTTGGCACCATTGCCAAT+TGG | + | chr5_1:56176554-56176573 | Msa0738410:CDS | 40.0% |
| ! | TTTTGGCACCATTGCCAATT+GGG | + | chr5_1:56176555-56176574 | Msa0738410:CDS | 40.0% |
| AGTTCCAGTAATTGGGATAG+TGG | - | chr5_1:56176606-56176625 | None:intergenic | 40.0% | |
| ACTATCCCAATTACTGGAAC+TGG | + | chr5_1:56176605-56176624 | Msa0738410:CDS | 40.0% | |
| TATTCTTGCAGTGGATCTTC+TGG | + | chr5_1:56176802-56176821 | Msa0738410:intron | 40.0% | |
| ATTCTTGCAGTGGATCTTCT+GGG | + | chr5_1:56176803-56176822 | Msa0738410:intron | 40.0% | |
| TCACTTAGACTTGAAGGGAA+TGG | - | chr5_1:56176886-56176905 | None:intergenic | 40.0% | |
| TGTAGCATGTGTGTGTGTTA+TGG | + | chr5_1:56177039-56177058 | Msa0738410:three_prime_UTR | 40.0% | |
| TTCCCAGAAAGACAACCACT+TGG | + | chr5_1:56175232-56175251 | Msa0738410:CDS | 45.0% | |
| TCCCAGAAAGACAACCACTT+GGG | + | chr5_1:56175233-56175252 | Msa0738410:CDS | 45.0% | |
| TCCCAAGTGGTTGTCTTTCT+GGG | - | chr5_1:56175237-56175256 | None:intergenic | 45.0% | |
| ATCCCAAGTGGTTGTCTTTC+TGG | - | chr5_1:56175238-56175257 | None:intergenic | 45.0% | |
| TCAAAGCCAAGATGACCCTA+AGG | + | chr5_1:56175264-56175283 | Msa0738410:CDS | 45.0% | |
| ! | GGTGGCTCTTGATAATCCTT+AGG | - | chr5_1:56175283-56175302 | None:intergenic | 45.0% |
| ! | AGCCATCTGAACTGACTTCA+TGG | + | chr5_1:56175320-56175339 | Msa0738410:CDS | 45.0% |
| GACCATGAAGTCAGTTCAGA+TGG | - | chr5_1:56175325-56175344 | None:intergenic | 45.0% | |
| TCATGGTCTTTCTACAGAGC+TGG | + | chr5_1:56175337-56175356 | Msa0738410:CDS | 45.0% | |
| CATGGTCTTTCTACAGAGCT+GGG | + | chr5_1:56175338-56175357 | Msa0738410:CDS | 45.0% | |
| TGTAAGACTGTGGGGATTCA+AGG | + | chr5_1:56175442-56175461 | Msa0738410:CDS | 45.0% | |
| TGGGGATTCAAGGAATTGCT+TGG | + | chr5_1:56175452-56175471 | Msa0738410:CDS | 45.0% | |
| GGGGATTCAAGGAATTGCTT+GGG | + | chr5_1:56175453-56175472 | Msa0738410:CDS | 45.0% | |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | + | chr5_1:56175460-56175479 | Msa0738410:CDS | 45.0% |
| ! | GCTCTTGTTTACTGTACTGC+TGG | + | chr5_1:56175496-56175515 | Msa0738410:CDS | 45.0% |
| TACTGTACTGCTGGAATCTC+AGG | + | chr5_1:56175505-56175524 | Msa0738410:CDS | 45.0% | |
| AATAGCCCAAATGTCACTGC+TGG | - | chr5_1:56176136-56176155 | None:intergenic | 45.0% | |
| !!! | CATTTGGGCTATTTTTGGCG+AGG | + | chr5_1:56176143-56176162 | Msa0738410:CDS | 45.0% |
| GTAACCAGGAGCAACAAAGT+TGG | - | chr5_1:56176290-56176309 | None:intergenic | 45.0% | |
| ! | TACACCAAAGGTGATGGTCT+TGG | + | chr5_1:56176307-56176326 | Msa0738410:CDS | 45.0% |
| !! | GGTCTTGGTGCTGAAATTGT+TGG | + | chr5_1:56176322-56176341 | Msa0738410:CDS | 45.0% |
| AAGAACACAGCGAACCCAAT+TGG | - | chr5_1:56176572-56176591 | None:intergenic | 45.0% | |
| AATTGGGTTCGCTGTGTTCT+TGG | + | chr5_1:56176571-56176590 | Msa0738410:CDS | 45.0% | |
| TTGGCCACTATCCCAATTAC+TGG | + | chr5_1:56176599-56176618 | Msa0738410:CDS | 45.0% | |
| ATTAACCCTGCTCGTAGTCT+TGG | + | chr5_1:56176629-56176648 | Msa0738410:CDS | 45.0% | |
| TCTTCAACAAGGACCTTGGT+TGG | + | chr5_1:56176663-56176682 | Msa0738410:CDS | 45.0% | |
| CTTCAACAAGGACCTTGGTT+GGG | + | chr5_1:56176664-56176683 | Msa0738410:CDS | 45.0% | |
| TTACGTGATCATCCCAACCA+AGG | - | chr5_1:56176679-56176698 | None:intergenic | 45.0% | |
| TTCTGGGTGGGACCATTTAT+TGG | + | chr5_1:56176819-56176838 | Msa0738410:CDS | 45.0% | |
| GCAAGAGCTGCTCCAATAAA+TGG | - | chr5_1:56176834-56176853 | None:intergenic | 45.0% | |
| TTCCCAGAAAGACAACCACT+TGG | + | chr5_1:56175232-56175251 | Msa0738410:CDS | 45.0% | |
| TCCCAGAAAGACAACCACTT+GGG | + | chr5_1:56175233-56175252 | Msa0738410:CDS | 45.0% | |
| TCCCAAGTGGTTGTCTTTCT+GGG | - | chr5_1:56175237-56175256 | None:intergenic | 45.0% | |
| ATCCCAAGTGGTTGTCTTTC+TGG | - | chr5_1:56175238-56175257 | None:intergenic | 45.0% | |
| TCAAAGCCAAGATGACCCTA+AGG | + | chr5_1:56175264-56175283 | Msa0738410:CDS | 45.0% | |
| ! | GGTGGCTCTTGATAATCCTT+AGG | - | chr5_1:56175283-56175302 | None:intergenic | 45.0% |
| ! | AGCCATCTGAACTGACTTCA+TGG | + | chr5_1:56175320-56175339 | Msa0738410:CDS | 45.0% |
| GACCATGAAGTCAGTTCAGA+TGG | - | chr5_1:56175325-56175344 | None:intergenic | 45.0% | |
| TCATGGTCTTTCTACAGAGC+TGG | + | chr5_1:56175337-56175356 | Msa0738410:CDS | 45.0% | |
| CATGGTCTTTCTACAGAGCT+GGG | + | chr5_1:56175338-56175357 | Msa0738410:CDS | 45.0% | |
| TGTAAGACTGTGGGGATTCA+AGG | + | chr5_1:56175442-56175461 | Msa0738410:CDS | 45.0% | |
| TGGGGATTCAAGGAATTGCT+TGG | + | chr5_1:56175452-56175471 | Msa0738410:CDS | 45.0% | |
| GGGGATTCAAGGAATTGCTT+GGG | + | chr5_1:56175453-56175472 | Msa0738410:CDS | 45.0% | |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | + | chr5_1:56175460-56175479 | Msa0738410:CDS | 45.0% |
| ! | GCTCTTGTTTACTGTACTGC+TGG | + | chr5_1:56175496-56175515 | Msa0738410:CDS | 45.0% |
| TACTGTACTGCTGGAATCTC+AGG | + | chr5_1:56175505-56175524 | Msa0738410:CDS | 45.0% | |
| AATAGCCCAAATGTCACTGC+TGG | - | chr5_1:56176136-56176155 | None:intergenic | 45.0% | |
| !!! | CATTTGGGCTATTTTTGGCG+AGG | + | chr5_1:56176143-56176162 | Msa0738410:CDS | 45.0% |
| GTAACCAGGAGCAACAAAGT+TGG | - | chr5_1:56176290-56176309 | None:intergenic | 45.0% | |
| ! | TACACCAAAGGTGATGGTCT+TGG | + | chr5_1:56176307-56176326 | Msa0738410:CDS | 45.0% |
| !! | GGTCTTGGTGCTGAAATTGT+TGG | + | chr5_1:56176322-56176341 | Msa0738410:CDS | 45.0% |
| AAGAACACAGCGAACCCAAT+TGG | - | chr5_1:56176572-56176591 | None:intergenic | 45.0% | |
| AATTGGGTTCGCTGTGTTCT+TGG | + | chr5_1:56176571-56176590 | Msa0738410:CDS | 45.0% | |
| TTGGCCACTATCCCAATTAC+TGG | + | chr5_1:56176599-56176618 | Msa0738410:CDS | 45.0% | |
| ATTAACCCTGCTCGTAGTCT+TGG | + | chr5_1:56176629-56176648 | Msa0738410:CDS | 45.0% | |
| TCTTCAACAAGGACCTTGGT+TGG | + | chr5_1:56176663-56176682 | Msa0738410:CDS | 45.0% | |
| CTTCAACAAGGACCTTGGTT+GGG | + | chr5_1:56176664-56176683 | Msa0738410:CDS | 45.0% | |
| TTACGTGATCATCCCAACCA+AGG | - | chr5_1:56176679-56176698 | None:intergenic | 45.0% | |
| TTCTGGGTGGGACCATTTAT+TGG | + | chr5_1:56176819-56176838 | Msa0738410:CDS | 45.0% | |
| GCAAGAGCTGCTCCAATAAA+TGG | - | chr5_1:56176834-56176853 | None:intergenic | 45.0% | |
| CTTTGAGCTGCAATCCCAAG+TGG | - | chr5_1:56175250-56175269 | None:intergenic | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | + | chr5_1:56175463-56175482 | Msa0738410:CDS | 50.0% |
| TGCATACTGTGTGATGCAGG+TGG | + | chr5_1:56176100-56176119 | Msa0738410:intron | 50.0% | |
| !! | TTGGGTGCTATTTGTGGTGC+TGG | + | chr5_1:56176211-56176230 | Msa0738410:CDS | 50.0% |
| !! | TGTGGTGCTGGTGTTGTGAA+AGG | + | chr5_1:56176223-56176242 | Msa0738410:CDS | 50.0% |
| GTTGCTCCTGGTTACACCAA+AGG | + | chr5_1:56176295-56176314 | Msa0738410:CDS | 50.0% | |
| ! | CCATCACCTTTGGTGTAACC+AGG | - | chr5_1:56176304-56176323 | None:intergenic | 50.0% |
| CCTGGTTACACCAAAGGTGA+TGG | + | chr5_1:56176301-56176320 | Msa0738410:CDS | 50.0% | |
| AGCACCAAGACCATCACCTT+TGG | - | chr5_1:56176314-56176333 | None:intergenic | 50.0% | |
| TCTGGCGCTACGTTTAGCAT+CGG | - | chr5_1:56176383-56176402 | None:intergenic | 50.0% | |
| TACGGGAACATGAGAGTCTC+TGG | - | chr5_1:56176401-56176420 | None:intergenic | 50.0% | |
| ACAGCGAACCCAATTGGCAA+TGG | - | chr5_1:56176566-56176585 | None:intergenic | 50.0% | |
| CGCTGTGTTCTTGGTTCACT+TGG | + | chr5_1:56176580-56176599 | Msa0738410:CDS | 50.0% | |
| TTGCAGTGGATCTTCTGGGT+GGG | + | chr5_1:56176807-56176826 | Msa0738410:intron | 50.0% | |
| TCCAGCTCGTGTGTGATGTA+CGG | + | chr5_1:56177101-56177120 | Msa0738410:three_prime_UTR | 50.0% | |
| CTTTGAGCTGCAATCCCAAG+TGG | - | chr5_1:56175250-56175269 | None:intergenic | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | + | chr5_1:56175463-56175482 | Msa0738410:CDS | 50.0% |
| TGCATACTGTGTGATGCAGG+TGG | + | chr5_1:56176100-56176119 | Msa0738410:intron | 50.0% | |
| !! | TTGGGTGCTATTTGTGGTGC+TGG | + | chr5_1:56176211-56176230 | Msa0738410:CDS | 50.0% |
| !! | TGTGGTGCTGGTGTTGTGAA+AGG | + | chr5_1:56176223-56176242 | Msa0738410:CDS | 50.0% |
| GTTGCTCCTGGTTACACCAA+AGG | + | chr5_1:56176295-56176314 | Msa0738410:CDS | 50.0% | |
| ! | CCATCACCTTTGGTGTAACC+AGG | - | chr5_1:56176304-56176323 | None:intergenic | 50.0% |
| CCTGGTTACACCAAAGGTGA+TGG | + | chr5_1:56176301-56176320 | Msa0738410:CDS | 50.0% | |
| AGCACCAAGACCATCACCTT+TGG | - | chr5_1:56176314-56176333 | None:intergenic | 50.0% | |
| TCTGGCGCTACGTTTAGCAT+CGG | - | chr5_1:56176383-56176402 | None:intergenic | 50.0% | |
| TACGGGAACATGAGAGTCTC+TGG | - | chr5_1:56176401-56176420 | None:intergenic | 50.0% | |
| ACAGCGAACCCAATTGGCAA+TGG | - | chr5_1:56176566-56176585 | None:intergenic | 50.0% | |
| CGCTGTGTTCTTGGTTCACT+TGG | + | chr5_1:56176580-56176599 | Msa0738410:CDS | 50.0% | |
| TTGCAGTGGATCTTCTGGGT+GGG | + | chr5_1:56176807-56176826 | Msa0738410:intron | 50.0% | |
| TCCAGCTCGTGTGTGATGTA+CGG | + | chr5_1:56177101-56177120 | Msa0738410:three_prime_UTR | 50.0% | |
| !! | TCAAACAACGGTGCTGGTGG+TGG | - | chr5_1:56175301-56175320 | None:intergenic | 55.0% |
| GATGGCTCAAACAACGGTGC+TGG | - | chr5_1:56175307-56175326 | None:intergenic | 55.0% | |
| GGTGCCAACTTTGTTGCTCC+TGG | + | chr5_1:56176283-56176302 | Msa0738410:CDS | 55.0% | |
| !! | AGCATCGGTGGCTGAGAAGA+CGG | - | chr5_1:56176368-56176387 | None:intergenic | 55.0% |
| CAGCACCAAGACTACGAGCA+GGG | - | chr5_1:56176637-56176656 | None:intergenic | 55.0% | |
| CTTGCAGTGGATCTTCTGGG+TGG | + | chr5_1:56176806-56176825 | Msa0738410:intron | 55.0% | |
| TCTTGCAGCACTCTACCACG+TGG | + | chr5_1:56176848-56176867 | Msa0738410:CDS | 55.0% | |
| !! | TGGCTCTGATTACGACCACG+TGG | - | chr5_1:56176866-56176885 | None:intergenic | 55.0% |
| CCAGCTCGTGTGTGATGTAC+GGG | + | chr5_1:56177102-56177121 | Msa0738410:three_prime_UTR | 55.0% | |
| !! | TCAAACAACGGTGCTGGTGG+TGG | - | chr5_1:56175301-56175320 | None:intergenic | 55.0% |
| GATGGCTCAAACAACGGTGC+TGG | - | chr5_1:56175307-56175326 | None:intergenic | 55.0% | |
| GGTGCCAACTTTGTTGCTCC+TGG | + | chr5_1:56176283-56176302 | Msa0738410:CDS | 55.0% | |
| !! | AGCATCGGTGGCTGAGAAGA+CGG | - | chr5_1:56176368-56176387 | None:intergenic | 55.0% |
| CAGCACCAAGACTACGAGCA+GGG | - | chr5_1:56176637-56176656 | None:intergenic | 55.0% | |
| CTTGCAGTGGATCTTCTGGG+TGG | + | chr5_1:56176806-56176825 | Msa0738410:intron | 55.0% | |
| TCTTGCAGCACTCTACCACG+TGG | + | chr5_1:56176848-56176867 | Msa0738410:CDS | 55.0% | |
| !! | TGGCTCTGATTACGACCACG+TGG | - | chr5_1:56176866-56176885 | None:intergenic | 55.0% |
| CCAGCTCGTGTGTGATGTAC+GGG | + | chr5_1:56177102-56177121 | Msa0738410:three_prime_UTR | 55.0% | |
| ! | GGCTCAAACAACGGTGCTGG+TGG | - | chr5_1:56175304-56175323 | None:intergenic | 60.0% |
| ! | GGCGCTACGTTTAGCATCGG+TGG | - | chr5_1:56176380-56176399 | None:intergenic | 60.0% |
| GCAGCACCAAGACTACGAGC+AGG | - | chr5_1:56176638-56176657 | None:intergenic | 60.0% | |
| CCCGTACATCACACACGAGC+TGG | - | chr5_1:56177105-56177124 | None:intergenic | 60.0% | |
| ! | GGCTCAAACAACGGTGCTGG+TGG | - | chr5_1:56175304-56175323 | None:intergenic | 60.0% |
| ! | GGCGCTACGTTTAGCATCGG+TGG | - | chr5_1:56176380-56176399 | None:intergenic | 60.0% |
| GCAGCACCAAGACTACGAGC+AGG | - | chr5_1:56176638-56176657 | None:intergenic | 60.0% | |
| CCCGTACATCACACACGAGC+TGG | - | chr5_1:56177105-56177124 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 56175138 | 56177215 | 56175138 | ID=Msa0738410;Name=Msa0738410 |
| chr5_1 | mRNA | 56175138 | 56177215 | 56175138 | ID=Msa0738410-mRNA-1;Parent=Msa0738410;Name=Msa0738410-mRNA-1;_AED=0.01;_eAED=0.01;_QI=52|1|1|1|1|1|4|310|289 |
| chr5_1 | exon | 56175138 | 56175526 | 56175138 | ID=Msa0738410-mRNA-1:exon:15888;Parent=Msa0738410-mRNA-1 |
| chr5_1 | exon | 56176119 | 56176417 | 56176119 | ID=Msa0738410-mRNA-1:exon:15889;Parent=Msa0738410-mRNA-1 |
| chr5_1 | exon | 56176554 | 56176694 | 56176554 | ID=Msa0738410-mRNA-1:exon:15890;Parent=Msa0738410-mRNA-1 |
| chr5_1 | exon | 56176813 | 56177215 | 56176813 | ID=Msa0738410-mRNA-1:exon:15891;Parent=Msa0738410-mRNA-1 |
| chr5_1 | five_prime_UTR | 56175138 | 56175189 | 56175138 | ID=Msa0738410-mRNA-1:five_prime_utr;Parent=Msa0738410-mRNA-1 |
| chr5_1 | CDS | 56175190 | 56175526 | 56175190 | ID=Msa0738410-mRNA-1:cds;Parent=Msa0738410-mRNA-1 |
| chr5_1 | CDS | 56176119 | 56176417 | 56176119 | ID=Msa0738410-mRNA-1:cds;Parent=Msa0738410-mRNA-1 |
| chr5_1 | CDS | 56176554 | 56176694 | 56176554 | ID=Msa0738410-mRNA-1:cds;Parent=Msa0738410-mRNA-1 |
| chr5_1 | CDS | 56176813 | 56176905 | 56176813 | ID=Msa0738410-mRNA-1:cds;Parent=Msa0738410-mRNA-1 |
| chr5_1 | three_prime_UTR | 56176906 | 56177215 | 56176906 | ID=Msa0738410-mRNA-1:three_prime_utr;Parent=Msa0738410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
