Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672780 | RHN59446.1 | 62.810 | 121 | 24 | 3 | 1 | 111 | 1 | 110 | 1.11e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672780 | A0A396I1F2 | 62.810 | 121 | 24 | 3 | 1 | 111 | 1 | 110 | 5.32e-30 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012800 | Msa0672780 | 0.811184 | 7.950338e-51 | -8.615850e-47 |
| Msa0012810 | Msa0672780 | 0.826054 | 3.348352e-54 | -8.615850e-47 |
| Msa0012820 | Msa0672780 | 0.832313 | 1.014913e-55 | -8.615850e-47 |
| Msa0031650 | Msa0672780 | 0.807052 | 6.102214e-50 | -8.615850e-47 |
| Msa0036550 | Msa0672780 | 0.809933 | 1.481195e-50 | -8.615850e-47 |
| Msa0036580 | Msa0672780 | 0.886080 | 4.669187e-72 | -8.615850e-47 |
| Msa0038010 | Msa0672780 | 0.807895 | 4.043138e-50 | -8.615850e-47 |
| Msa0044250 | Msa0672780 | -0.812289 | 4.568736e-51 | -8.615850e-47 |
| Msa0048950 | Msa0672780 | 0.818649 | 1.755700e-52 | -8.615850e-47 |
| Msa0059880 | Msa0672780 | 0.815140 | 1.076838e-51 | -8.615850e-47 |
| Msa0061590 | Msa0672780 | 0.826943 | 2.055272e-54 | -8.615850e-47 |
| Msa0061600 | Msa0672780 | 0.840705 | 7.402039e-58 | -8.615850e-47 |
| Msa0084160 | Msa0672780 | 0.801548 | 8.547173e-49 | -8.615850e-47 |
| Msa0084390 | Msa0672780 | 0.823837 | 1.117199e-53 | -8.615850e-47 |
| Msa0085710 | Msa0672780 | 0.824297 | 8.711153e-54 | -8.615850e-47 |
| Msa0087130 | Msa0672780 | -0.809379 | 1.948454e-50 | -8.615850e-47 |
| Msa0093530 | Msa0672780 | 0.825862 | 3.718323e-54 | -8.615850e-47 |
| Msa0096510 | Msa0672780 | -0.805572 | 1.251507e-49 | -8.615850e-47 |
| Msa0096860 | Msa0672780 | 0.806447 | 8.189787e-50 | -8.615850e-47 |
| Msa0106130 | Msa0672780 | 0.838885 | 2.203945e-57 | -8.615850e-47 |
| Msa0618260 | Msa0672780 | -0.807999 | 3.842283e-50 | -8.615850e-47 |
| Msa0623750 | Msa0672780 | 0.810357 | 1.199841e-50 | -8.615850e-47 |
| Msa0645120 | Msa0672780 | 0.826661 | 2.400640e-54 | -8.615850e-47 |
| Msa0667620 | Msa0672780 | 0.800765 | 1.235965e-48 | -8.615850e-47 |
| Msa0667640 | Msa0672780 | 0.824279 | 8.799150e-54 | -8.615850e-47 |
| Msa0668210 | Msa0672780 | 0.842042 | 3.292328e-58 | -8.615850e-47 |
| Msa0668230 | Msa0672780 | 0.805926 | 1.054605e-49 | -8.615850e-47 |
| Msa0670360 | Msa0672780 | 0.802458 | 5.556975e-49 | -8.615850e-47 |
| Msa0671400 | Msa0672780 | 0.830340 | 3.103591e-55 | -8.615850e-47 |
| Msa0672780 | Msa0678620 | 0.817076 | 3.978356e-52 | -8.615850e-47 |
| Msa0672780 | Msa0684600 | 0.819098 | 1.388253e-52 | -8.615850e-47 |
| Msa0672780 | Msa0709820 | 0.802715 | 4.918241e-49 | -8.615850e-47 |
| Msa0672780 | Msa0711240 | 0.834216 | 3.407661e-56 | -8.615850e-47 |
| Msa0672780 | Msa0715260 | 0.812738 | 3.644199e-51 | -8.615850e-47 |
| Msa0672780 | Msa0715510 | 0.802714 | 4.921887e-49 | -8.615850e-47 |
| Msa0672780 | Msa0716600 | 0.854554 | 1.139239e-61 | -8.615850e-47 |
| Msa0672780 | Msa0716980 | 0.803525 | 3.344827e-49 | -8.615850e-47 |
| Msa0672780 | Msa0721260 | 0.811310 | 7.461888e-51 | -8.615850e-47 |
| Msa0672780 | Msa0730890 | 0.810126 | 1.345796e-50 | -8.615850e-47 |
| Msa0672780 | Msa0735340 | 0.834857 | 2.351215e-56 | -8.615850e-47 |
| Msa0672780 | Msa0738570 | 0.829853 | 4.080306e-55 | -8.615850e-47 |
| Msa0672780 | Msa0738660 | 0.802561 | 5.292889e-49 | -8.615850e-47 |
| Msa0672780 | Msa0747500 | 0.839146 | 1.886129e-57 | -8.615850e-47 |
| Msa0672780 | Msa0753410 | 0.802389 | 5.742879e-49 | -8.615850e-47 |
| Msa0672780 | Msa0757240 | 0.810683 | 1.020255e-50 | -8.615850e-47 |
| Msa0672780 | Msa0757990 | 0.829209 | 5.851125e-55 | -8.615850e-47 |
| Msa0672780 | Msa0758000 | 0.825224 | 5.267411e-54 | -8.615850e-47 |
| Msa0672780 | Msa0758150 | 0.836938 | 6.976376e-57 | -8.615850e-47 |
| Msa0672780 | Msa0776340 | 0.835351 | 1.765529e-56 | -8.615850e-47 |
| Msa0672780 | Msa0777210 | 0.827710 | 1.346230e-54 | -8.615850e-47 |
| Msa0672780 | Msa0783580 | 0.839926 | 1.182883e-57 | -8.615850e-47 |
| Msa0672780 | Msa0791300 | 0.816018 | 6.865658e-52 | -8.615850e-47 |
| Msa0672780 | Msa0793060 | -0.804253 | 2.360466e-49 | -8.615850e-47 |
| Msa0672780 | Msa0794090 | 0.826529 | 2.580281e-54 | -8.615850e-47 |
| Msa0672780 | Msa0795330 | 0.809257 | 2.069625e-50 | -8.615850e-47 |
| Msa0672780 | Msa0798230 | 0.811281 | 7.573140e-51 | -8.615850e-47 |
| Msa0672780 | Msa0813840 | 0.818165 | 2.259820e-52 | -8.615850e-47 |
| Msa0672780 | Msa0814350 | 0.832255 | 1.049137e-55 | -8.615850e-47 |
| Msa0672780 | Msa0817100 | 0.842986 | 1.849524e-58 | -8.615850e-47 |
| Msa0672780 | Msa0819110 | 0.836880 | 7.219889e-57 | -8.615850e-47 |
| Msa0672780 | Msa0824860 | 0.810323 | 1.220671e-50 | -8.615850e-47 |
| Msa0672780 | Msa0831320 | 0.817729 | 2.835673e-52 | -8.615850e-47 |
| Msa0672780 | Msa0836740 | 0.812431 | 4.254029e-51 | -8.615850e-47 |
| Msa0672780 | Msa0838100 | -0.810882 | 9.238718e-51 | -8.615850e-47 |
| Msa0672780 | Msa0854380 | 0.818761 | 1.655675e-52 | -8.615850e-47 |
| Msa0672780 | Msa0854860 | 0.839478 | 1.546663e-57 | -8.615850e-47 |
| Msa0672780 | Msa0859230 | 0.826351 | 2.845532e-54 | -8.615850e-47 |
| Msa0672780 | Msa0863840 | 0.814064 | 1.863126e-51 | -8.615850e-47 |
| Msa0672780 | Msa0863850 | 0.806938 | 6.449533e-50 | -8.615850e-47 |
| Msa0672780 | Msa0883610 | 0.850156 | 2.036678e-60 | -8.615850e-47 |
| Msa0672780 | Msa0883640 | 0.817226 | 3.679892e-52 | -8.615850e-47 |
| Msa0672780 | Msa0886370 | 0.874271 | 7.695910e-68 | -8.615850e-47 |
| Msa0672780 | Msa0896920 | 0.811664 | 6.252635e-51 | -8.615850e-47 |
| Msa0672780 | Msa0896990 | 0.841855 | 3.687682e-58 | -8.615850e-47 |
| Msa0672780 | Msa0902340 | 0.823626 | 1.251570e-53 | -8.615850e-47 |
| Msa0672780 | Msa0910570 | 0.835383 | 1.732944e-56 | -8.615850e-47 |
| Msa0672780 | Msa0910590 | 0.867191 | 1.641844e-65 | -8.615850e-47 |
| Msa0672780 | Msa0910830 | 0.820042 | 8.454748e-53 | -8.615850e-47 |
| Msa0672780 | Msa0913500 | 0.840345 | 9.198593e-58 | -8.615850e-47 |
| Msa0672780 | Msa0932930 | 0.826881 | 2.126762e-54 | -8.615850e-47 |
| Msa0672780 | Msa0933610 | 0.804118 | 2.518754e-49 | -8.615850e-47 |
| Msa0672780 | Msa0948430 | 0.861838 | 7.743814e-64 | -8.615850e-47 |
| Msa0672780 | Msa0948460 | 0.817687 | 2.897290e-52 | -8.615850e-47 |
| Msa0672780 | Msa0951060 | 0.891329 | 4.386163e-74 | -8.615850e-47 |
| Msa0672780 | Msa0960090 | 0.818170 | 2.254042e-52 | -8.615850e-47 |
| Msa0672780 | Msa0962260 | 0.833735 | 4.496245e-56 | -8.615850e-47 |
| Msa0672780 | Msa0970790 | 0.803857 | 2.853187e-49 | -8.615850e-47 |
| Msa0672780 | Msa0985250 | 0.880019 | 7.745306e-70 | -8.615850e-47 |
| Msa0672780 | Msa0985260 | 0.845834 | 3.172336e-59 | -8.615850e-47 |
| Msa0672780 | Msa0985290 | 0.843543 | 1.313484e-58 | -8.615850e-47 |
| Msa0672780 | Msa0985380 | 0.811875 | 5.625198e-51 | -8.615850e-47 |
| Msa0672780 | Msa0985700 | 0.818650 | 1.754415e-52 | -8.615850e-47 |
| Msa0672780 | Msa0986620 | -0.807818 | 4.198501e-50 | -8.615850e-47 |
| Msa0672780 | Msa0987550 | 0.874046 | 9.165905e-68 | -8.615850e-47 |
| Msa0672780 | Msa0996940 | 0.856245 | 3.664136e-62 | -8.615850e-47 |
| Msa0672780 | Msa0999480 | -0.807716 | 4.412483e-50 | -8.615850e-47 |
| Msa0672780 | Msa1003240 | 0.807764 | 4.310900e-50 | -8.615850e-47 |
| Msa0672780 | Msa1024420 | 0.805055 | 1.606020e-49 | -8.615850e-47 |
| Msa0672780 | Msa1036020 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0672780 | Msa1036590 | 0.801834 | 7.468652e-49 | -8.615850e-47 |
| Msa0672780 | Msa1040330 | 0.825700 | 4.063127e-54 | -8.615850e-47 |
| Msa0672780 | Msa1046220 | 0.843112 | 1.711903e-58 | -8.615850e-47 |
| Msa0672780 | Msa1047300 | 0.806268 | 8.931325e-50 | -8.615850e-47 |
| Msa0672780 | Msa1047340 | 0.808384 | 3.180093e-50 | -8.615850e-47 |
| Msa0672780 | Msa1061670 | 0.804903 | 1.727478e-49 | -8.615850e-47 |
| Msa0672780 | Msa1061760 | 0.813118 | 3.009111e-51 | -8.615850e-47 |
| Msa0672780 | Msa1063260 | 0.804255 | 2.358447e-49 | -8.615850e-47 |
| Msa0672780 | Msa1067910 | -0.818561 | 1.837888e-52 | -8.615850e-47 |
| Msa0672780 | Msa1076830 | 0.824325 | 8.579742e-54 | -8.615850e-47 |
| Msa0672780 | Msa1076900 | 0.804939 | 1.697557e-49 | -8.615850e-47 |
| Msa0672780 | Msa1077940 | 0.822184 | 2.713496e-53 | -8.615850e-47 |
| Msa0672780 | Msa1083100 | 0.861971 | 7.049099e-64 | -8.615850e-47 |
| Msa0672780 | Msa1087200 | 0.833537 | 5.038749e-56 | -8.615850e-47 |
| Msa0672780 | Msa1096280 | -0.807101 | 5.958388e-50 | -8.615850e-47 |
| Msa0672780 | Msa1107320 | 0.805512 | 1.288152e-49 | -8.615850e-47 |
| Msa0672780 | Msa1109880 | 0.806339 | 8.632095e-50 | -8.615850e-47 |
| Msa0672780 | Msa1109890 | 0.819114 | 1.376168e-52 | -8.615850e-47 |
| Msa0672780 | Msa1115000 | 0.800768 | 1.234486e-48 | -8.615850e-47 |
| Msa0672780 | Msa1127940 | 0.811634 | 6.345748e-51 | -8.615850e-47 |
| Msa0672780 | Msa1138110 | 0.805581 | 1.245538e-49 | -8.615850e-47 |
| Msa0672780 | Msa1138600 | -0.802352 | 5.843776e-49 | -8.615850e-47 |
| Msa0672780 | Msa1156670 | 0.810675 | 1.024318e-50 | -8.615850e-47 |
| Msa0672780 | Msa1165860 | 0.816905 | 4.345088e-52 | -8.615850e-47 |
| Msa0672780 | Msa1166020 | -0.806978 | 6.325519e-50 | -8.615850e-47 |
| Msa0672780 | Msa1166520 | -0.804399 | 2.201176e-49 | -8.615850e-47 |
| Msa0672780 | Msa1187750 | 0.804910 | 1.722133e-49 | -8.615850e-47 |
| Msa0672780 | Msa1209790 | -0.803292 | 3.738169e-49 | -8.615850e-47 |
| Msa0672780 | Msa1209800 | -0.803950 | 2.729591e-49 | -8.615850e-47 |
| Msa0672780 | Msa1211160 | 0.829080 | 6.286982e-55 | -8.615850e-47 |
| Msa0672780 | Msa1211320 | 0.820589 | 6.333327e-53 | -8.615850e-47 |
| Msa0672780 | Msa1214960 | 0.819148 | 1.352364e-52 | -8.615850e-47 |
| Msa0672780 | Msa1219780 | 0.832145 | 1.117345e-55 | -8.615850e-47 |
| Msa0672780 | Msa1221170 | 0.813158 | 2.948317e-51 | -8.615850e-47 |
| Msa0672780 | Msa1222030 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0672780 | Msa1235760 | -0.816948 | 4.249371e-52 | -8.615850e-47 |
| Msa0672780 | Msa1235770 | -0.823596 | 1.272357e-53 | -8.615850e-47 |
| Msa0672780 | Msa1259560 | 0.812840 | 3.462987e-51 | -8.615850e-47 |
| Msa0672780 | Msa1259570 | 0.806257 | 8.981922e-50 | -8.615850e-47 |
| Msa0672780 | Msa1265500 | 0.816973 | 4.194558e-52 | -8.615850e-47 |
| Msa0672780 | Msa1266710 | 0.826456 | 2.686629e-54 | -8.615850e-47 |
| Msa0672780 | Msa1281130 | 0.802467 | 5.533036e-49 | -8.615850e-47 |
| Msa0672780 | Msa1286950 | -0.832933 | 7.123732e-56 | -8.615850e-47 |
| Msa0672780 | Msa1299310 | 0.828966 | 6.700111e-55 | -8.615850e-47 |
| Msa0672780 | Msa1302010 | 0.808858 | 2.518825e-50 | -8.615850e-47 |
| Msa0672780 | Msa1319230 | -0.823675 | 1.218892e-53 | -8.615850e-47 |
| Msa0672780 | Msa1329770 | 0.828547 | 8.463048e-55 | -8.615850e-47 |
| Msa0672780 | Msa1335500 | 0.847963 | 8.288955e-60 | -8.615850e-47 |
| Msa0672780 | Msa1336100 | 0.817458 | 3.263409e-52 | -8.615850e-47 |
| Msa0672780 | Msa1339490 | 0.811691 | 6.167959e-51 | -8.615850e-47 |
| Msa0672780 | Msa1357490 | 0.805586 | 1.242565e-49 | -8.615850e-47 |
| Msa0672780 | Msa1363690 | 0.856534 | 3.014932e-62 | -8.615850e-47 |
| Msa0672780 | Msa1368150 | -0.805865 | 1.085785e-49 | -8.615850e-47 |
| Msa0672780 | Msa1370930 | 0.865416 | 6.001511e-65 | -8.615850e-47 |
| Msa0672780 | Msa1373560 | 0.807036 | 6.149092e-50 | -8.615850e-47 |
| Msa0672780 | Msa1375640 | 0.805651 | 1.204553e-49 | -8.615850e-47 |
| Msa0672780 | Msa1376070 | 0.828901 | 6.946603e-55 | -8.615850e-47 |
| Msa0672780 | Msa1376520 | 0.861825 | 7.813920e-64 | -8.615850e-47 |
| Msa0672780 | Msa1377190 | 0.811224 | 7.790644e-51 | -8.615850e-47 |
| Msa0672780 | Msa1378950 | 0.850042 | 2.192463e-60 | -8.615850e-47 |
| Msa0672780 | Msa1379250 | 0.810711 | 1.006170e-50 | -8.615850e-47 |
| Msa0672780 | Msa1382180 | 0.819704 | 1.009897e-52 | -8.615850e-47 |
| Msa0672780 | Msa1384980 | -0.811293 | 7.527029e-51 | -8.615850e-47 |
| Msa0672780 | Msa1390040 | 0.991526 | 4.034484e-188 | -8.615850e-47 |
| Msa0672780 | Msa1393440 | 0.807245 | 5.553430e-50 | -8.615850e-47 |
| Msa0672780 | Msa1395580 | -0.820651 | 6.129219e-53 | -8.615850e-47 |
| Msa0672780 | Msa1395690 | 0.885776 | 6.072764e-72 | -8.615850e-47 |
| Msa0672780 | Msa1395720 | 0.804953 | 1.686080e-49 | -8.615850e-47 |
| Msa0672780 | Msa1396310 | -0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0672780 | Msa1396550 | 0.869377 | 3.241805e-66 | -8.615850e-47 |
| Msa0672780 | Msa1398110 | 0.810483 | 1.127162e-50 | -8.615850e-47 |
| Msa0672780 | Msa1407210 | 0.824793 | 6.657376e-54 | -8.615850e-47 |
| Msa0672780 | Msa1407670 | 0.805364 | 1.383229e-49 | -8.615850e-47 |
| Msa0672780 | Msa1408190 | -0.819850 | 9.353039e-53 | -8.615850e-47 |
| Msa0672780 | Msa1409060 | 0.813219 | 2.859743e-51 | -8.615850e-47 |
| Msa0672780 | Msa1417220 | 0.806410 | 8.338647e-50 | -8.615850e-47 |
| Msa0672780 | Msa1421120 | 0.815199 | 1.044749e-51 | -8.615850e-47 |
| Msa0672780 | Msa1423660 | 0.811008 | 8.676366e-51 | -8.615850e-47 |
| Msa0672780 | Msa1425110 | -0.801538 | 8.588230e-49 | -8.615850e-47 |
| Msa0672780 | Msa1429190 | 0.826737 | 2.302580e-54 | -8.615850e-47 |
| Msa0672780 | Msa1445780 | 0.831187 | 1.923751e-55 | -8.615850e-47 |
| Msa0672780 | Msa1448990 | -0.820463 | 6.768254e-53 | -8.615850e-47 |
| Msa0672780 | Msa1449770 | 0.804057 | 2.593623e-49 | -8.615850e-47 |
| Msa0672780 | Msa1451780 | -0.805106 | 1.566929e-49 | -8.615850e-47 |
| Msa0672780 | Msa1456600 | 0.802423 | 5.651400e-49 | -8.615850e-47 |
| Msa0672780 | Msa1459630 | -0.805706 | 1.172961e-49 | -8.615850e-47 |
| Msa0672780 | Msa1459970 | 0.809392 | 1.936086e-50 | -8.615850e-47 |
| Msa0672780 | Msa1460310 | 0.813769 | 2.164251e-51 | -8.615850e-47 |
| Msa0672780 | Msa1463820 | 0.827823 | 1.264807e-54 | -8.615850e-47 |
| Msa0126960 | Msa0672780 | 0.826638 | 2.430587e-54 | -8.615850e-47 |
| Msa0129270 | Msa0672780 | 0.854491 | 1.188057e-61 | -8.615850e-47 |
| Msa0130710 | Msa0672780 | 0.812809 | 3.516545e-51 | -8.615850e-47 |
| Msa0132250 | Msa0672780 | 0.822098 | 2.841006e-53 | -8.615850e-47 |
| Msa0139270 | Msa0672780 | 0.889889 | 1.615465e-73 | -8.615850e-47 |
| Msa0143950 | Msa0672780 | 0.802001 | 6.900514e-49 | -8.615850e-47 |
| Msa0148430 | Msa0672780 | -0.808258 | 3.383867e-50 | -8.615850e-47 |
| Msa0150910 | Msa0672780 | 0.807734 | 4.372848e-50 | -8.615850e-47 |
| Msa0152650 | Msa0672780 | 0.814006 | 1.919202e-51 | -8.615850e-47 |
| Msa0164630 | Msa0672780 | -0.809240 | 2.086157e-50 | -8.615850e-47 |
| Msa0171740 | Msa0672780 | 0.805959 | 1.037500e-49 | -8.615850e-47 |
| Msa0175060 | Msa0672780 | 0.802672 | 5.019739e-49 | -8.615850e-47 |
| Msa0176600 | Msa0672780 | 0.819590 | 1.072345e-52 | -8.615850e-47 |
| Msa0176620 | Msa0672780 | 0.892090 | 2.187030e-74 | -8.615850e-47 |
| Msa0219810 | Msa0672780 | 0.820272 | 7.486068e-53 | -8.615850e-47 |
| Msa0234120 | Msa0672780 | 0.801979 | 6.974677e-49 | -8.615850e-47 |
| Msa0236610 | Msa0672780 | 0.826294 | 2.935393e-54 | -8.615850e-47 |
| Msa0372990 | Msa0672780 | -0.800461 | 1.425739e-48 | -8.615850e-47 |
| Msa0375500 | Msa0672780 | 0.809672 | 1.685293e-50 | -8.615850e-47 |
| Msa0375550 | Msa0672780 | 0.812818 | 3.500579e-51 | -8.615850e-47 |
| Msa0393900 | Msa0672780 | 0.800816 | 1.206928e-48 | -8.615850e-47 |
| Msa0398690 | Msa0672780 | 0.801805 | 7.572481e-49 | -8.615850e-47 |
| Msa0424240 | Msa0672780 | 0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa0424300 | Msa0672780 | 0.849528 | 3.052762e-60 | -8.615850e-47 |
| Msa0431940 | Msa0672780 | -0.800157 | 1.644138e-48 | -8.615850e-47 |
| Msa0469550 | Msa0672780 | 0.803194 | 3.915777e-49 | -8.615850e-47 |
| Msa0471210 | Msa0672780 | 0.833420 | 5.387019e-56 | -8.615850e-47 |
| Msa0478400 | Msa0672780 | 0.826473 | 2.660758e-54 | -8.615850e-47 |
| Msa0243970 | Msa0672780 | 0.807842 | 4.147782e-50 | -8.615850e-47 |
| Msa0243990 | Msa0672780 | 0.816637 | 4.991842e-52 | -8.615850e-47 |
| Msa0264940 | Msa0672780 | 0.818963 | 1.489684e-52 | -8.615850e-47 |
| Msa0266640 | Msa0672780 | 0.852893 | 3.422618e-61 | -8.615850e-47 |
| Msa0266650 | Msa0672780 | 0.829293 | 5.582086e-55 | -8.615850e-47 |
| Msa0275570 | Msa0672780 | 0.831791 | 1.366456e-55 | -8.615850e-47 |
| Msa0277320 | Msa0672780 | 0.817798 | 2.735247e-52 | -8.615850e-47 |
| Msa0278940 | Msa0672780 | 0.810935 | 8.997988e-51 | -8.615850e-47 |
| Msa0297650 | Msa0672780 | 0.820289 | 7.419291e-53 | -8.615850e-47 |
| Msa0298270 | Msa0672780 | 0.809710 | 1.654075e-50 | -8.615850e-47 |
| Msa0302990 | Msa0672780 | 0.813706 | 2.234470e-51 | -8.615850e-47 |
| Msa0314980 | Msa0672780 | -0.801253 | 9.822914e-49 | -8.615850e-47 |
| Msa0315300 | Msa0672780 | 0.820544 | 6.486697e-53 | -8.615850e-47 |
| Msa0336640 | Msa0672780 | 0.819049 | 1.424527e-52 | -8.615850e-47 |
| Msa0356200 | Msa0672780 | 0.807662 | 4.529550e-50 | -8.615850e-47 |
| Msa0356250 | Msa0672780 | 0.825230 | 5.250949e-54 | -8.615850e-47 |
| Msa0488900 | Msa0672780 | -0.802347 | 5.856500e-49 | -8.615850e-47 |
| Msa0491760 | Msa0672780 | 0.814529 | 1.471033e-51 | -8.615850e-47 |
| Msa0493710 | Msa0672780 | 0.800263 | 1.564211e-48 | -8.615850e-47 |
| Msa0515930 | Msa0672780 | 0.846481 | 2.114063e-59 | -8.615850e-47 |
| Msa0532670 | Msa0672780 | 0.816232 | 6.148780e-52 | -8.615850e-47 |
| Msa0532680 | Msa0672780 | 0.814056 | 1.870647e-51 | -8.615850e-47 |
| Msa0533510 | Msa0672780 | 0.851707 | 7.447483e-61 | -8.615850e-47 |
| Msa0533520 | Msa0672780 | 0.828201 | 1.025414e-54 | -8.615850e-47 |
| Msa0538450 | Msa0672780 | 0.807051 | 6.105373e-50 | -8.615850e-47 |
| Msa0538520 | Msa0672780 | 0.810566 | 1.081331e-50 | -8.615850e-47 |
| Msa0538650 | Msa0672780 | 0.941437 | 4.168923e-101 | -8.615850e-47 |
| Msa0548760 | Msa0672780 | 0.829070 | 6.322336e-55 | -8.615850e-47 |
| Msa0548970 | Msa0672780 | 0.808974 | 2.379427e-50 | -8.615850e-47 |
| Msa0554660 | Msa0672780 | 0.800051 | 1.727796e-48 | -8.615850e-47 |
| Msa0569290 | Msa0672780 | -0.802860 | 4.591087e-49 | -8.615850e-47 |
| Msa0581190 | Msa0672780 | -0.813001 | 3.192461e-51 | -8.615850e-47 |
| Msa0589450 | Msa0672780 | 0.841874 | 3.647345e-58 | -8.615850e-47 |
| Msa0589720 | Msa0672780 | 0.835414 | 1.701140e-56 | -8.615850e-47 |
| Msa0589730 | Msa0672780 | 0.812244 | 4.672792e-51 | -8.615850e-47 |
| Msa0589740 | Msa0672780 | 0.825424 | 4.723185e-54 | -8.615850e-47 |
| Msa0589750 | Msa0672780 | 0.805416 | 1.349213e-49 | -8.615850e-47 |
| Msa0594470 | Msa0672780 | 0.856204 | 3.769061e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672780 | MtrunA17_Chr4g0013381 | 62.810 | 121 | 24 | 3 | 1 | 111 | 1 | 110 | 1.03e-33 | 114 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 53.390 | 118 | 46 | 2 | 10 | 118 | 277 | 394 | 6.90e-18 | 78.2 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 52.294 | 109 | 51 | 1 | 10 | 118 | 227 | 334 | 1.16e-17 | 77.4 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 50.000 | 120 | 51 | 2 | 8 | 118 | 175 | 294 | 3.47e-16 | 73.6 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 50.000 | 110 | 54 | 1 | 10 | 119 | 87 | 195 | 3.02e-15 | 70.9 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 48.387 | 124 | 40 | 4 | 21 | 120 | 3 | 126 | 3.76e-14 | 67.4 |
| Msa0672780 | MtrunA17_Chr4g0013421 | 40.411 | 146 | 58 | 4 | 5 | 126 | 357 | 497 | 7.48e-12 | 60.8 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 52.294 | 109 | 51 | 1 | 10 | 118 | 192 | 299 | 1.21e-17 | 77.4 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 53.043 | 115 | 46 | 3 | 10 | 118 | 87 | 199 | 1.08e-16 | 74.7 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 46.269 | 134 | 47 | 3 | 10 | 118 | 242 | 375 | 6.91e-14 | 66.6 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 47.967 | 123 | 50 | 3 | 10 | 118 | 137 | 259 | 6.98e-14 | 66.6 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 48.438 | 128 | 52 | 3 | 5 | 118 | 27 | 154 | 7.69e-14 | 66.6 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 47.581 | 124 | 41 | 4 | 21 | 120 | 3 | 126 | 1.07e-13 | 66.2 |
| Msa0672780 | MtrunA17_Chr4g0013451 | 36.810 | 163 | 62 | 5 | 4 | 126 | 307 | 468 | 2.67e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGACTGGAGGTTTCTCAAC+TGG | 0.297152 | 4_4:-18178954 | Msa0672780:CDS |
| AACCGGAGGCTTGTCATAAT+TGG | 0.298691 | 4_4:-18178397 | Msa0672780:CDS |
| GTCGAGAAGCCACCAGTTTA+CGG | 0.299440 | 4_4:+18179002 | None:intergenic |
| TGCTCTCTTTGTCATCCCTC+AGG | 0.337569 | 4_4:+18178368 | None:intergenic |
| ACTACTGGTGGCTTGTAAAC+TGG | 0.353333 | 4_4:-18178654 | Msa0672780:CDS |
| TACACTGGTGGTTGGTAAAC+CGG | 0.382977 | 4_4:-18178414 | Msa0672780:CDS |
| CTCAACTGGAGGCTTGTAAA+CGG | 0.405571 | 4_4:-18178895 | Msa0672780:CDS |
| TCAACTGGTGGCTTATACAC+TGG | 0.412257 | 4_4:-18178429 | Msa0672780:CDS |
| TACACCGGTGGCTTGTAAAC+AGG | 0.419007 | 4_4:-18178579 | Msa0672780:CDS |
| TAGACTGGAGGCTTCTCAAC+TGG | 0.423306 | 4_4:-18178909 | Msa0672780:CDS |
| AGACTGGAGGTTTCTCAACT+GGG | 0.425047 | 4_4:-18178953 | Msa0672780:CDS |
| TGGTGAGGAGGTCCGTAAAC+TGG | 0.427954 | 4_4:-18179014 | Msa0672780:CDS |
| TAAACTGGTGGCTTCTCGAC+TGG | 0.430061 | 4_4:-18178999 | Msa0672780:CDS |
| TCGACTGGAGGCTTGTAAAC+TGG | 0.436990 | 4_4:-18178984 | Msa0672780:CDS |
| TAAACTGGTGGCTTGTAGAC+TGG | 0.441265 | 4_4:-18178969 | Msa0672780:CDS |
| TAAACGGGTGGCTTGTAGAC+TGG | 0.441414 | 4_4:-18178879 | Msa0672780:CDS |
| TAAACAGGTGGCTTGTAGAC+TGG | 0.443434 | 4_4:-18178924 | Msa0672780:CDS |
| TATACCGGAGGCTTGTAAAC+AGG | 0.449409 | 4_4:-18178624 | Msa0672780:CDS |
| TAAACAGGAGGCTTCTCAAC+TGG | 0.459812 | 4_4:-18178609 | Msa0672780:CDS |
| TCAACTGGTGGCTTGTACAC+CGG | 0.460751 | 4_4:-18178594 | Msa0672780:CDS |
| TATACAGGTGGCTTCACTAC+TGG | 0.464722 | 4_4:-18178669 | Msa0672780:intron |
| GCTCTCTTTGTCATCCCTCA+GGG | 0.466378 | 4_4:+18178369 | None:intergenic |
| TAGACTGGAGGCTTGTATAC+AGG | 0.470954 | 4_4:-18178864 | Msa0672780:intron |
| TCAACTGGAGGCTTGTAAAC+GGG | 0.476504 | 4_4:-18178894 | Msa0672780:CDS |
| GCCTCCTGTTTACAAGCCTC+CGG | 0.504860 | 4_4:+18178620 | None:intergenic |
| TGCCAATTATGACAAGCCTC+CGG | 0.514734 | 4_4:+18178395 | None:intergenic |
| TAAACTGGAGGCTTGTATAC+CGG | 0.526226 | 4_4:-18178639 | Msa0672780:CDS |
| GACTGGAGGTTTCTCAACTG+GGG | 0.534766 | 4_4:-18178952 | Msa0672780:CDS |
| GGGAACTATGGGTGGTGAGG+AGG | 0.563963 | 4_4:-18179026 | None:intergenic |
| ACTGGAGGTTTCTCAACTGG+GGG | 0.581297 | 4_4:-18178951 | Msa0672780:CDS |
| CGAGGGAACTATGGGTGGTG+AGG | 0.583741 | 4_4:-18179029 | None:intergenic |
| ACCTCCTGTTTACAAGCCAC+CGG | 0.585895 | 4_4:+18178575 | None:intergenic |
| ACAGGTGGCTTCACTACTGG+TGG | 0.613745 | 4_4:-18178666 | Msa0672780:intron |
| ACTGGTGGCTTCTCGACTGG+AGG | 0.616423 | 4_4:-18178996 | Msa0672780:CDS |
| ACTGGAGGCTTGTAAACTGG+TGG | 0.629358 | 4_4:-18178981 | Msa0672780:CDS |
| ACTGGTGGCTTATACACTGG+TGG | 0.631560 | 4_4:-18178426 | Msa0672780:CDS |
| TCATAATTGGCAAGACCCTG+AGG | 0.637663 | 4_4:-18178384 | Msa0672780:CDS |
| ACCGGTGGCTTGTAAACAGG+AGG | 0.639427 | 4_4:-18178576 | Msa0672780:intron |
| TGAGGAGGTCCGTAAACTGG+TGG | 0.639666 | 4_4:-18179011 | Msa0672780:CDS |
| ACAGGAGGCTTCTCAACTGG+TGG | 0.640818 | 4_4:-18178606 | Msa0672780:CDS |
| ACCGGAGGCTTGTAAACAGG+AGG | 0.642069 | 4_4:-18178621 | Msa0672780:CDS |
| CATAATTGGCAAGACCCTGA+GGG | 0.642655 | 4_4:-18178383 | Msa0672780:CDS |
| ACTGGTGGCTTGTACACCGG+TGG | 0.645745 | 4_4:-18178591 | Msa0672780:CDS |
| ACTGGAGGCTTCTCAACTGG+AGG | 0.646341 | 4_4:-18178906 | Msa0672780:CDS |
| ACTGGAGGCTTGTAAACGGG+TGG | 0.650242 | 4_4:-18178891 | Msa0672780:CDS |
| GTGGCTTATACACTGGTGGT+TGG | 0.651466 | 4_4:-18178422 | Msa0672780:CDS |
| ACTGGTGGCTTGTAGACTGG+AGG | 0.655799 | 4_4:-18178966 | Msa0672780:CDS |
| CTACCCGAGGGAACTATGGG+TGG | 0.657162 | 4_4:-18179034 | None:intergenic |
| ACTGGAGGCTTGTATACCGG+AGG | 0.673497 | 4_4:-18178636 | Msa0672780:CDS |
| ACGGGTGGCTTGTAGACTGG+AGG | 0.678574 | 4_4:-18178876 | Msa0672780:CDS |
| ACTGGTGGCTTGTAAACTGG+AGG | 0.680586 | 4_4:-18178651 | Msa0672780:CDS |
| ACAGGTGGCTTGTAGACTGG+AGG | 0.680593 | 4_4:-18178921 | Msa0672780:CDS |
| ACTGGTGGTTGGTAAACCGG+AGG | 0.711189 | 4_4:-18178411 | Msa0672780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAAACAGGAGGTTTGTAAAC+CGG | - | chr4_4:18178834-18178853 | Msa0672780:intron | 35.0% | |
| TATACAGGTGGCTTAACTAC+TGG | - | chr4_4:18178549-18178568 | Msa0672780:intron | 40.0% | |
| TAAACAGGAGGCTTGTAAAC+AGG | - | chr4_4:18178639-18178658 | Msa0672780:CDS | 40.0% | |
| TAAACTGGAGGCTTGTATAC+CGG | - | chr4_4:18178759-18178778 | Msa0672780:intron | 40.0% | |
| AAACAGGAGGTTTGTAAACC+GGG | - | chr4_4:18178835-18178854 | Msa0672780:intron | 40.0% | |
| ! | TAAACTGGTGGCTTGTAGAC+TGG | - | chr4_4:18178429-18178448 | Msa0672780:CDS | 45.0% |
| TAGACTGGAGGTTTCTCAAC+TGG | - | chr4_4:18178444-18178463 | Msa0672780:CDS | 45.0% | |
| AGACTGGAGGTTTCTCAACT+GGG | - | chr4_4:18178445-18178464 | Msa0672780:CDS | 45.0% | |
| ! | TAAACAGGTGGCTTGTAGAC+TGG | - | chr4_4:18178474-18178493 | Msa0672780:intron | 45.0% |
| CTCAACTGGAGGCTTGTAAA+CGG | - | chr4_4:18178503-18178522 | Msa0672780:intron | 45.0% | |
| TCAACTGGAGGCTTGTAAAC+GGG | - | chr4_4:18178504-18178523 | Msa0672780:intron | 45.0% | |
| TAGACTGGAGGCTTGTATAC+AGG | - | chr4_4:18178534-18178553 | Msa0672780:intron | 45.0% | |
| ! | ACTACTGGTGGCTTGTAAAC+TGG | - | chr4_4:18178564-18178583 | Msa0672780:intron | 45.0% |
| ! | TAAACTGGTGGCTTGTACAC+CGG | - | chr4_4:18178579-18178598 | Msa0672780:CDS | 45.0% |
| TAAACAGGAGGCTTCTCAAC+TGG | - | chr4_4:18178609-18178628 | Msa0672780:CDS | 45.0% | |
| ! | TCAACTGGTGGCTTGTAAAC+AGG | - | chr4_4:18178624-18178643 | Msa0672780:CDS | 45.0% |
| TAAACAGGAGGCTTGTACAC+CGG | - | chr4_4:18178654-18178673 | Msa0672780:CDS | 45.0% | |
| TAGACTGGAGGCTTGTATAC+AGG | - | chr4_4:18178534-18178553 | Msa0672780:intron | 45.0% | |
| TATACAGGTGGCTTCACTAC+TGG | - | chr4_4:18178729-18178748 | Msa0672780:intron | 45.0% | |
| ! | ACTACTGGTGGCTTGTAAAC+TGG | - | chr4_4:18178564-18178583 | Msa0672780:intron | 45.0% |
| TATACCGGAGGCTTGTAAAC+AGG | - | chr4_4:18178774-18178793 | Msa0672780:intron | 45.0% | |
| TAAACAGGAGGCTTCTCAAC+TGG | - | chr4_4:18178609-18178628 | Msa0672780:CDS | 45.0% | |
| AACAGGAGGTTTGTAAACCG+GGG | - | chr4_4:18178836-18178855 | Msa0672780:intron | 45.0% | |
| ! | TACACAGGTGGCTTTTCTAC+CGG | - | chr4_4:18178879-18178898 | Msa0672780:CDS | 45.0% |
| TACACAGGTGGCTTATACAC+AGG | - | chr4_4:18178909-18178928 | Msa0672780:CDS | 45.0% | |
| TCAACTGGTGGCTTATACAC+TGG | - | chr4_4:18178969-18178988 | Msa0672780:CDS | 45.0% | |
| !! | TACACTGGTGGTTGGTAAAC+CGG | - | chr4_4:18178984-18179003 | Msa0672780:CDS | 45.0% |
| AACCGGAGGCTTGTCATAAT+TGG | - | chr4_4:18179001-18179020 | Msa0672780:CDS | 45.0% | |
| TGCCAATTATGACAAGCCTC+CGG | + | chr4_4:18179006-18179025 | None:intergenic | 45.0% | |
| TCATAATTGGCAAGACCCTG+AGG | - | chr4_4:18179014-18179033 | Msa0672780:CDS | 45.0% | |
| CATAATTGGCAAGACCCTGA+GGG | - | chr4_4:18179015-18179034 | Msa0672780:CDS | 45.0% | |
| GTCGAGAAGCCACCAGTTTA+CGG | + | chr4_4:18178399-18178418 | None:intergenic | 50.0% | |
| TAAACTGGTGGCTTCTCGAC+TGG | - | chr4_4:18178399-18178418 | Msa0672780:CDS | 50.0% | |
| TCGACTGGAGGCTTGTAAAC+TGG | - | chr4_4:18178414-18178433 | Msa0672780:CDS | 50.0% | |
| ACTGGAGGCTTGTAAACTGG+TGG | - | chr4_4:18178417-18178436 | Msa0672780:CDS | 50.0% | |
| GACTGGAGGTTTCTCAACTG+GGG | - | chr4_4:18178446-18178465 | Msa0672780:CDS | 50.0% | |
| ACTGGAGGTTTCTCAACTGG+GGG | - | chr4_4:18178447-18178466 | Msa0672780:CDS | 50.0% | |
| TCAACTGGGGGCTTGTAAAC+AGG | - | chr4_4:18178459-18178478 | Msa0672780:intron | 50.0% | |
| TAGACTGGAGGCTTCTCAAC+TGG | - | chr4_4:18178489-18178508 | Msa0672780:intron | 50.0% | |
| ! | TAAACGGGTGGCTTGTAGAC+TGG | - | chr4_4:18178519-18178538 | Msa0672780:intron | 50.0% |
| ACTGGAGGCTTGTATACAGG+TGG | - | chr4_4:18178537-18178556 | Msa0672780:intron | 50.0% | |
| ACAGGTGGCTTAACTACTGG+TGG | - | chr4_4:18178552-18178571 | Msa0672780:intron | 50.0% | |
| ! | ACTGGTGGCTTGTAAACTGG+TGG | - | chr4_4:18178567-18178586 | Msa0672780:intron | 50.0% |
| TACACCGGAGGCTTGTAAAC+AGG | - | chr4_4:18178594-18178613 | Msa0672780:CDS | 50.0% | |
| ! | ACTGGTGGCTTGTAAACAGG+AGG | - | chr4_4:18178627-18178646 | Msa0672780:CDS | 50.0% |
| ACAGGAGGCTTGTAAACAGG+AGG | - | chr4_4:18178642-18178661 | Msa0672780:CDS | 50.0% | |
| TAGACTGGAGGCTTCTCAAC+TGG | - | chr4_4:18178489-18178508 | Msa0672780:intron | 50.0% | |
| ! | TCAACTGGTGGCTTGTAGAC+TGG | - | chr4_4:18178699-18178718 | Msa0672780:intron | 50.0% |
| ACTGGAGGCTTGTATACAGG+TGG | - | chr4_4:18178537-18178556 | Msa0672780:intron | 50.0% | |
| ! | ACTGGTGGCTTGTAAACTGG+AGG | - | chr4_4:18178567-18178586 | Msa0672780:intron | 50.0% |
| ! | TCAACTGGTGGCTTGTACAC+CGG | - | chr4_4:18178804-18178823 | Msa0672780:intron | 50.0% |
| ! | TACACCGGTGGCTTGTAAAC+AGG | - | chr4_4:18178819-18178838 | Msa0672780:intron | 50.0% |
| ACCTCCTGTTTACAAGCCAC+CGG | + | chr4_4:18178826-18178845 | None:intergenic | 50.0% | |
| ACAGGAGGTTTGTAAACCGG+GGG | - | chr4_4:18178837-18178856 | Msa0672780:intron | 50.0% | |
| ! | ACACAGGTGGCTTTTCTACC+GGG | - | chr4_4:18178880-18178899 | Msa0672780:CDS | 50.0% |
| ACAGGTGGCTTATACACAGG+TGG | - | chr4_4:18178912-18178931 | Msa0672780:CDS | 50.0% | |
| TACACAGGTGGCTTCTCTAC+AGG | - | chr4_4:18178924-18178943 | Msa0672780:CDS | 50.0% | |
| ACACAGGTGGCTTCTCTACA+GGG | - | chr4_4:18178925-18178944 | Msa0672780:CDS | 50.0% | |
| TCTACAGGGGGTTTGTAGAC+AGG | - | chr4_4:18178939-18178958 | Msa0672780:CDS | 50.0% | |
| CTACAGGGGGTTTGTAGACA+GGG | - | chr4_4:18178940-18178959 | Msa0672780:CDS | 50.0% | |
| TACAGGGGGTTTGTAGACAG+GGG | - | chr4_4:18178941-18178960 | Msa0672780:CDS | 50.0% | |
| TAGACAGGGGGTTTCTCAAC+TGG | - | chr4_4:18178954-18178973 | Msa0672780:CDS | 50.0% | |
| ACTGGTGGCTTATACACTGG+TGG | - | chr4_4:18178972-18178991 | Msa0672780:CDS | 50.0% | |
| GTGGCTTATACACTGGTGGT+TGG | - | chr4_4:18178976-18178995 | Msa0672780:CDS | 50.0% | |
| TGGTGAGGAGGTCCGTAAAC+TGG | - | chr4_4:18178384-18178403 | Msa0672780:CDS | 55.0% | |
| TGAGGAGGTCCGTAAACTGG+TGG | - | chr4_4:18178387-18178406 | Msa0672780:CDS | 55.0% | |
| ! | ACTGGTGGCTTGTAGACTGG+AGG | - | chr4_4:18178432-18178451 | Msa0672780:CDS | 55.0% |
| ACTGGGGGCTTGTAAACAGG+TGG | - | chr4_4:18178462-18178481 | Msa0672780:intron | 55.0% | |
| ! | ACAGGTGGCTTGTAGACTGG+AGG | - | chr4_4:18178477-18178496 | Msa0672780:intron | 55.0% |
| ACTGGAGGCTTCTCAACTGG+AGG | - | chr4_4:18178492-18178511 | Msa0672780:intron | 55.0% | |
| ACTGGAGGCTTGTAAACGGG+TGG | - | chr4_4:18178507-18178526 | Msa0672780:intron | 55.0% | |
| ACCGGAGGCTTGTAAACAGG+AGG | - | chr4_4:18178597-18178616 | Msa0672780:CDS | 55.0% | |
| GCCTCCTGTTTACAAGCCTC+CGG | + | chr4_4:18178601-18178620 | None:intergenic | 55.0% | |
| ACAGGAGGCTTCTCAACTGG+TGG | - | chr4_4:18178612-18178631 | Msa0672780:CDS | 55.0% | |
| ! | TACACCGGTGGCTTGTAGAC+TGG | - | chr4_4:18178669-18178688 | Msa0672780:intron | 55.0% |
| ACTGGAGGCTTCTCAACTGG+TGG | - | chr4_4:18178492-18178511 | Msa0672780:intron | 55.0% | |
| ! | ACTGGTGGCTTGTAGACTGG+AGG | - | chr4_4:18178432-18178451 | Msa0672780:CDS | 55.0% |
| ACAGGTGGCTTCACTACTGG+TGG | - | chr4_4:18178732-18178751 | Msa0672780:intron | 55.0% | |
| ACTGGAGGCTTGTATACCGG+AGG | - | chr4_4:18178762-18178781 | Msa0672780:intron | 55.0% | |
| ACCGGAGGCTTGTAAACAGG+AGG | - | chr4_4:18178597-18178616 | Msa0672780:CDS | 55.0% | |
| GCCTCCTGTTTACAAGCCTC+CGG | + | chr4_4:18178601-18178620 | None:intergenic | 55.0% | |
| ACAGGAGGCTTCTCAACTGG+TGG | - | chr4_4:18178612-18178631 | Msa0672780:CDS | 55.0% | |
| ! | ACCGGTGGCTTGTAAACAGG+AGG | - | chr4_4:18178822-18178841 | Msa0672780:intron | 55.0% |
| TAAACCGGGGGTTTCACGAC+AGG | - | chr4_4:18178849-18178868 | Msa0672780:intron | 55.0% | |
| AAACCGGGGGTTTCACGACA+GGG | - | chr4_4:18178850-18178869 | Msa0672780:intron | 55.0% | |
| ACGACAGGGGGTTTGTACAC+AGG | - | chr4_4:18178864-18178883 | Msa0672780:intron | 55.0% | |
| ACAGGGGGTTTGTACACAGG+TGG | - | chr4_4:18178867-18178886 | Msa0672780:CDS | 55.0% | |
| ! | CACAGGTGGCTTTTCTACCG+GGG | - | chr4_4:18178881-18178900 | Msa0672780:CDS | 55.0% |
| ! | ACAGGTGGCTTTTCTACCGG+GGG | - | chr4_4:18178882-18178901 | Msa0672780:CDS | 55.0% |
| CACAGGTGGCTTCTCTACAG+GGG | - | chr4_4:18178926-18178945 | Msa0672780:CDS | 55.0% | |
| ACAGGTGGCTTCTCTACAGG+GGG | - | chr4_4:18178927-18178946 | Msa0672780:CDS | 55.0% | |
| ACAGGGGGTTTGTAGACAGG+GGG | - | chr4_4:18178942-18178961 | Msa0672780:CDS | 55.0% | |
| ACAGGGGGTTTCTCAACTGG+TGG | - | chr4_4:18178957-18178976 | Msa0672780:CDS | 55.0% | |
| !! | ACTGGTGGTTGGTAAACCGG+AGG | - | chr4_4:18178987-18179006 | Msa0672780:CDS | 55.0% |
| ACTGGTGGCTTCTCGACTGG+AGG | - | chr4_4:18178402-18178421 | Msa0672780:CDS | 60.0% | |
| ! | ACGGGTGGCTTGTAGACTGG+AGG | - | chr4_4:18178522-18178541 | Msa0672780:intron | 60.0% |
| ! | ACTGGTGGCTTGTACACCGG+AGG | - | chr4_4:18178582-18178601 | Msa0672780:CDS | 60.0% |
| ACAGGAGGCTTGTACACCGG+TGG | - | chr4_4:18178657-18178676 | Msa0672780:CDS | 60.0% | |
| ! | ACCGGTGGCTTGTAGACTGG+AGG | - | chr4_4:18178672-18178691 | Msa0672780:intron | 60.0% |
| GCCTCCAGTCTACAAGCCAC+CGG | + | chr4_4:18178481-18178500 | None:intergenic | 60.0% | |
| ! | ACTGGTGGCTTGTACACCGG+TGG | - | chr4_4:18178582-18178601 | Msa0672780:CDS | 60.0% |
| AACCGGGGGTTTCACGACAG+GGG | - | chr4_4:18178851-18178870 | Msa0672780:intron | 60.0% | |
| TCTACCGGGGGCTTGTACAC+AGG | - | chr4_4:18178894-18178913 | Msa0672780:CDS | 60.0% | |
| ACCGGGGGTTTCACGACAGG+GGG | - | chr4_4:18178852-18178871 | Msa0672780:intron | 65.0% | |
| ACCCCCTGTCGTGAAACCCC+CGG | + | chr4_4:18178856-18178875 | None:intergenic | 65.0% | |
| ACCGGGGGCTTGTACACAGG+TGG | - | chr4_4:18178897-18178916 | Msa0672780:CDS | 65.0% | |
| GCCACCTGTGTACAAGCCCC+CGG | + | chr4_4:18178901-18178920 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 18178379 | 18179041 | 18178379 | ID=Msa0672780;Name=Msa0672780 |
| chr4_4 | mRNA | 18178379 | 18179041 | 18178379 | ID=Msa0672780-mRNA-1;Parent=Msa0672780;Name=Msa0672780-mRNA-1;_AED=0.53;_eAED=0.89;_QI=0|0|0|1|0|0|3|0|126 |
| chr4_4 | exon | 18178865 | 18179041 | 18178865 | ID=Msa0672780-mRNA-1:exon:5327;Parent=Msa0672780-mRNA-1 |
| chr4_4 | exon | 18178577 | 18178684 | 18178577 | ID=Msa0672780-mRNA-1:exon:5326;Parent=Msa0672780-mRNA-1 |
| chr4_4 | exon | 18178379 | 18178474 | 18178379 | ID=Msa0672780-mRNA-1:exon:5325;Parent=Msa0672780-mRNA-1 |
| chr4_4 | CDS | 18178865 | 18179041 | 18178865 | ID=Msa0672780-mRNA-1:cds;Parent=Msa0672780-mRNA-1 |
| chr4_4 | CDS | 18178577 | 18178684 | 18178577 | ID=Msa0672780-mRNA-1:cds;Parent=Msa0672780-mRNA-1 |
| chr4_4 | CDS | 18178379 | 18178474 | 18178379 | ID=Msa0672780-mRNA-1:cds;Parent=Msa0672780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
