AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0671400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0671400 MtrunA17_Chr4g0011301 98.636 733 10 0 2 734 3 735 0.0 1496
Msa0671400 MtrunA17_Chr1g0213271 87.463 678 85 0 56 733 57 734 0.0 1252
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0671400 AT2G45290.1 79.004 743 145 3 1 734 1 741 0.0 1223
Msa0671400 AT2G45290.2 79.004 743 145 3 1 734 1 741 0.0 1223
Msa0671400 AT3G60750.1 78.466 743 149 3 1 734 1 741 0.0 1209
Msa0671400 AT3G60750.2 78.466 743 148 4 1 734 1 740 0.0 1205

Find 232 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTGGGTGGCATGTTATT+TGG 0.165907 4_4:+14651764 Msa0671400:CDS
ACTCTCAGTGAAAGCGATTT+TGG 0.212726 4_4:-14651722 None:intergenic
TCTTGTGGCATCAACTTCTT+TGG 0.239047 4_4:-14652474 None:intergenic
TTCGGGTGGGAGAAAATTAT+TGG 0.245328 4_4:+14653735 Msa0671400:CDS
TTCTATAGGTATTGTATATT+GGG 0.257909 4_4:+14651583 Msa0671400:intron
TTTCTATAGGTATTGTATAT+TGG 0.260478 4_4:+14651582 Msa0671400:intron
TGGGAGTGTGGGTGCGGTTG+AGG 0.263742 4_4:-14649618 None:intergenic
TACACTGAACCAGTCCTCTT+TGG 0.274918 4_4:+14649313 Msa0671400:five_prime_UTR
GAGTTGTTTCCTTTGTTTCT+TGG 0.277523 4_4:+14653622 Msa0671400:CDS
TATGCTTTGCTTCATCTTGC+TGG 0.279540 4_4:+14649937 Msa0671400:CDS
GGATTGAGAGAGGTGGGTGG+TGG 0.281918 4_4:-14649638 None:intergenic
AGTTGTTTCCTTTGTTTCTT+GGG 0.312843 4_4:+14653623 Msa0671400:CDS
GTTAAACCAAAACGGATTCT+TGG 0.316196 4_4:-14649869 None:intergenic
TTGTTGCTTGAATAAGAAAA+AGG 0.320449 4_4:+14653992 Msa0671400:three_prime_UTR
ACTTGGGTGGCATGTTATTT+GGG 0.323384 4_4:+14651765 Msa0671400:CDS
CTGTAAGAGTTGGATTTATT+CGG 0.323686 4_4:-14652428 None:intergenic
GGACGGAGCATCAAGATATT+TGG 0.327899 4_4:-14653342 None:intergenic
ACAAAGTTGCGGTGCTTAAC+AGG 0.328102 4_4:+14653394 Msa0671400:CDS
CCAGGAGTTTCAAAATTCTC+AGG 0.328165 4_4:-14651174 None:intergenic
GCAATCGGCATTGATCGTTT+TGG 0.329334 4_4:+14653771 Msa0671400:CDS
AATGAAGCTTGCTCACTTGC+AGG 0.330765 4_4:+14651634 Msa0671400:CDS
GGGAGTGTGGGTGCGGTTGA+GGG 0.331266 4_4:-14649617 None:intergenic
TAGAGCACCTGGCAAGCTTC+CGG 0.331331 4_4:+14653313 Msa0671400:CDS
AGAGGTGGGTGGTGGGAGTG+TGG 0.331392 4_4:-14649630 None:intergenic
GTTGCATCGGCAGGGATCTC+TGG 0.332471 4_4:-14652928 None:intergenic
GAACATTCGCAAGGGCATTA+AGG 0.334104 4_4:-14652972 None:intergenic
CGGTTGAGGGTGATGGTGGA+TGG 0.338201 4_4:-14649604 None:intergenic
TGAAATTCGTGCTGCCATTA+AGG 0.343448 4_4:+14651813 Msa0671400:CDS
GCCCTTGCGAATGTTCTTCC+CGG 0.361812 4_4:+14652979 Msa0671400:CDS
CCGTTTCCTCGCGGTTGATT+CGG 0.361888 4_4:+14649756 Msa0671400:CDS
GAGGTGGGTGGTGGGAGTGT+GGG 0.372394 4_4:-14649629 None:intergenic
GTGGGTGCGGTTGAGGGTGA+TGG 0.372867 4_4:-14649611 None:intergenic
ACCTATGGGTTGTGCTCCAA+TGG 0.375675 4_4:+14649810 Msa0671400:CDS
TTTGTATGCAATTTCCAATT+CGG 0.377921 4_4:-14653562 None:intergenic
GATTGGAACTGGTTCCGAAT+TGG 0.381540 4_4:+14653548 Msa0671400:CDS
GGGTGGTGGGAGTGTGGGTG+CGG 0.381769 4_4:-14649624 None:intergenic
GGAACAATATACAAAGAGTT+TGG 0.388573 4_4:+14653810 Msa0671400:CDS
TTCTATTGAAGGAGTTGAAA+AGG 0.389406 4_4:+14653473 Msa0671400:CDS
GCATTGCCCGGAAGCTTGCC+AGG 0.390101 4_4:-14653320 None:intergenic
TCAAAATTCTCAGGGTGTCC+AGG 0.392747 4_4:-14651165 None:intergenic
GGGTCATCCTGGTTTACCTA+TGG 0.396435 4_4:+14649795 Msa0671400:CDS
GGATGTGAGGCGCGTAAGAT+TGG 0.402805 4_4:-14649551 None:intergenic
GCAGAGCGTAATGTTAGATT+TGG 0.403232 4_4:+14653084 Msa0671400:CDS
AACTCCTTCAATAGAAGTTC+CGG 0.404053 4_4:-14653466 None:intergenic
AGAGCACCTGGCAAGCTTCC+GGG 0.404549 4_4:+14653314 Msa0671400:CDS
TTCACAACAACCATTGGTTA+TGG 0.404843 4_4:+14652401 Msa0671400:CDS
ATTGTCGGGCTTGTTAAATC+TGG 0.405666 4_4:-14651452 None:intergenic
ACACTGAACCAGTCCTCTTT+GGG 0.406577 4_4:+14649314 Msa0671400:five_prime_UTR
CATGTTATTTGGGTAAAGAA+TGG 0.408155 4_4:+14651775 Msa0671400:CDS
CCTGTTGTGACTTCAATTCC+AGG 0.410667 4_4:-14651192 None:intergenic
AGGTTTCGGGTTGCATCGGC+AGG 0.411643 4_4:-14652937 None:intergenic
GTTGGTGAGAGAGAGGGAAG+TGG 0.411984 4_4:-14649527 None:intergenic
ATTTGAAGCAATTTCGTCAA+TGG 0.412981 4_4:+14651130 Msa0671400:CDS
TTAAACCAAAACGGATTCTT+GGG 0.415538 4_4:-14649868 None:intergenic
ATAATCCCAAGAATCCGTTT+TGG 0.418460 4_4:+14649863 Msa0671400:CDS
TGGCGATTTACCTGCTGGTT+GGG 0.424044 4_4:+14652755 Msa0671400:CDS
CTTGCAGGACACTGGGGACT+AGG 0.424166 4_4:+14651649 Msa0671400:CDS
GACATATATAACACCGGCTT+CGG 0.430122 4_4:-14653238 None:intergenic
AAGAGAGGCGCGTGGTGGAT+GGG 0.430849 4_4:-14649576 None:intergenic
TTTGAAGCAATTTCGTCAAT+GGG 0.431071 4_4:+14651131 Msa0671400:CDS
GATGTGAGGCGCGTAAGATT+GGG 0.432115 4_4:-14649550 None:intergenic
ATTGAGGCTGGATCAACATT+CGG 0.433929 4_4:+14653717 Msa0671400:CDS
TGTTCTTCCTACTGCTGTTA+CGG 0.435558 4_4:+14653683 Msa0671400:CDS
TCCTACTGCTGTTACGGCTA+GGG 0.438037 4_4:+14653689 Msa0671400:CDS
TCTAGAAAGGGCAAGGATAG+AGG 0.439993 4_4:-14653424 None:intergenic
TAAACCAGGATGACCCGAAT+TGG 0.441726 4_4:-14649788 None:intergenic
AGAGAGGCGCGTGGTGGATG+GGG 0.442811 4_4:-14649575 None:intergenic
AAGCTTGCCAGGTGCTCTAT+AGG 0.443449 4_4:-14653309 None:intergenic
GATGAGTCTGTGGTGGTTGA+GGG 0.444300 4_4:-14649706 None:intergenic
TATAACACCGGCTTCGGATA+GGG 0.445320 4_4:-14653232 None:intergenic
GGCACGTGGAAAGGCTCATA+TGG 0.445479 4_4:-14652512 None:intergenic
GACAATCACATTTCTATTGA+CGG 0.446265 4_4:+14651694 Msa0671400:CDS
TTGATATATCTACACAGAAA+AGG 0.446370 4_4:+14653950 Msa0671400:three_prime_UTR
TGCTGGATATGACAGTGTTC+AGG 0.446747 4_4:+14649954 Msa0671400:CDS
GGTCATCCTGGTTTACCTAT+GGG 0.448870 4_4:+14649796 Msa0671400:CDS
AGATGAGTCTGTGGTGGTTG+AGG 0.451017 4_4:-14649707 None:intergenic
AATGTTCTTCCCGGTCTGAT+TGG 0.452056 4_4:+14652988 Msa0671400:CDS
GAAAATGAGAGAAAATGAAA+AGG 0.452077 4_4:-14649461 None:intergenic
ACTACATGCGTGGTGCCATT+AGG 0.453398 4_4:+14653202 Msa0671400:CDS
CCGAATCAACCGCGAGGAAA+CGG 0.453858 4_4:-14649756 None:intergenic
ATAGAAGTTCCGGCAAGGTT+AGG 0.455709 4_4:-14653456 None:intergenic
CAGCTAAGTGCTTCTCTGCA+AGG 0.457975 4_4:-14651429 None:intergenic
GGATGGCGGTGTGGCGAAGA+TGG 0.458269 4_4:-14649663 None:intergenic
ATATAACACCGGCTTCGGAT+AGG 0.459608 4_4:-14653233 None:intergenic
TTGAGGCTGGATCAACATTC+GGG 0.461408 4_4:+14653718 Msa0671400:CDS
GTTCCAATCAAAATGACATC+AGG 0.463051 4_4:-14653534 None:intergenic
ATCGTCTCTGACAACTCAAC+AGG 0.465225 4_4:+14653504 Msa0671400:CDS
GATTGAGAGAGGTGGGTGGT+GGG 0.466182 4_4:-14649637 None:intergenic
TCTTTGTATATTGTTCCTGC+AGG 0.467549 4_4:-14653804 None:intergenic
GGTGCGGTTGAGGGTGATGG+TGG 0.471597 4_4:-14649608 None:intergenic
AGATTTGGTGTTAGAGAACA+TGG 0.472958 4_4:+14653099 Msa0671400:CDS
TGGCGGTGTGGCGAAGATGG+TGG 0.474169 4_4:-14649660 None:intergenic
ATCACTGGCGATTTACCTGC+TGG 0.474246 4_4:+14652750 Msa0671400:CDS
TTCCTACTGCTGTTACGGCT+AGG 0.475622 4_4:+14653688 Msa0671400:CDS
TGCTCTATAGGCTGGTGGGT+TGG 0.475899 4_4:-14653297 None:intergenic
ATGTGGCAACACAACTCAAT+TGG 0.476185 4_4:-14654118 None:intergenic
GGCGGTGTGGCGAAGATGGT+GGG 0.476920 4_4:-14649659 None:intergenic
CCTATGGGTTGTGCTCCAAT+GGG 0.477027 4_4:+14649811 Msa0671400:CDS
ATTGGGTGATGGTTGTCAAA+TGG 0.477289 4_4:+14651600 Msa0671400:CDS
CTTGCTCACTTGCAGGACAC+TGG 0.478425 4_4:+14651641 Msa0671400:CDS
GATTGGGGTTGGTGAGAGAG+AGG 0.479684 4_4:-14649534 None:intergenic
GAAGAGAGGCGCGTGGTGGA+TGG 0.482024 4_4:-14649577 None:intergenic
GAGCAGCACCCTCACGGATG+TGG 0.483979 4_4:-14652650 None:intergenic
ATGATCAATGATCTCATTGT+CGG 0.484911 4_4:-14651467 None:intergenic
CTTGCCGGAACTTCTATTGA+AGG 0.488516 4_4:+14653462 Msa0671400:CDS
CCACAGTTCACAACAACCAT+TGG 0.488981 4_4:+14652395 Msa0671400:intron
TGAACAATCACAAGCTTACA+AGG 0.490208 4_4:+14653656 Msa0671400:CDS
CAAAATTCTCAGGGTGTCCA+GGG 0.491690 4_4:-14651164 None:intergenic
CAGGGAATTGCCAATGCTGT+TGG 0.494279 4_4:+14651400 Msa0671400:CDS
CCAGGTGCTCTATAGGCTGG+TGG 0.494759 4_4:-14653302 None:intergenic
TCTATTGAAGGAGTTGAAAA+GGG 0.494796 4_4:+14653474 Msa0671400:CDS
TTGCTCACTTGCAGGACACT+GGG 0.494803 4_4:+14651642 Msa0671400:CDS
GGTTGAGGGTGATGGTGGAT+GGG 0.495802 4_4:-14649603 None:intergenic
TCAAGATATTTGGCATTGCC+CGG 0.496204 4_4:-14653332 None:intergenic
AATCTAACATTACGCTCTGC+TGG 0.496416 4_4:-14653081 None:intergenic
CTGGCGATTTACCTGCTGGT+TGG 0.496706 4_4:+14652754 Msa0671400:CDS
AAAGCCAATTCGGGTCATCC+TGG 0.501100 4_4:+14649784 Msa0671400:CDS
TTGCAGGACACTGGGGACTA+GGG 0.502548 4_4:+14651650 Msa0671400:CDS
GCTGTTTCGTTACCGTCAGC+GGG 0.504323 4_4:-14653363 None:intergenic
GATGCCACAAGAAACAATCT+TGG 0.505359 4_4:+14652485 Msa0671400:CDS
CCTGGAATTGAAGTCACAAC+AGG 0.506192 4_4:+14651192 Msa0671400:CDS
GTTCTTCCCGGTCTGATTGG+TGG 0.508547 4_4:+14652991 Msa0671400:CDS
GGATAGGGCGGAAAGCCTAA+TGG 0.509150 4_4:-14653217 None:intergenic
TTGCCAGGTGCTCTATAGGC+TGG 0.512357 4_4:-14653305 None:intergenic
TGATATATCTACACAGAAAA+GGG 0.512497 4_4:+14653951 Msa0671400:three_prime_UTR
GCTCTGCTGGAGAATCACTT+TGG 0.513151 4_4:-14653068 None:intergenic
GAGGCGCGTGGTGGATGGGG+AGG 0.514640 4_4:-14649572 None:intergenic
ACATCCTCGGGCACGTGGAA+AGG 0.514742 4_4:-14652521 None:intergenic
CAGGAGTTTCAAAATTCTCA+GGG 0.514921 4_4:-14651173 None:intergenic
TGGTGTTAGAGAACATGGAA+TGG 0.515232 4_4:+14653104 Msa0671400:CDS
CCATCCAAGATTGTTTCTTG+TGG 0.515955 4_4:-14652489 None:intergenic
TCAATAGGACTTGGAGAGGA+TGG 0.517033 4_4:+14653273 Msa0671400:CDS
AAACTAACCTTGATCAATGT+GGG 0.518234 4_4:-14651859 None:intergenic
CGATAGGTTTCGGGTTGCAT+CGG 0.518470 4_4:-14652941 None:intergenic
GTCATGACTCACGATTCAAT+AGG 0.519509 4_4:+14653258 Msa0671400:CDS
TCCATGCACACTGTAAGAGT+TGG 0.523004 4_4:-14652438 None:intergenic
GGTGAGGATCTAAGAAAAGA+AGG 0.525397 4_4:+14653588 Msa0671400:CDS
TGATCAATGATCTCATTGTC+GGG 0.526652 4_4:-14651466 None:intergenic
GGTGTTAGAGAACATGGAAT+GGG 0.527853 4_4:+14653105 Msa0671400:CDS
TGCACTGCCACCAATCAGAC+CGG 0.530225 4_4:-14652998 None:intergenic
TCCAACTCTTACAGTGTGCA+TGG 0.531313 4_4:+14652437 Msa0671400:CDS
CAGGTGCTCTATAGGCTGGT+GGG 0.534576 4_4:-14653301 None:intergenic
GGAAGCAAAGGAAAAGCAAT+CGG 0.535838 4_4:+14653756 Msa0671400:CDS
AGCTGTTTCGTTACCGTCAG+CGG 0.536201 4_4:-14653364 None:intergenic
CAATGGGAGAGCAGAACCCC+TGG 0.538408 4_4:+14651147 Msa0671400:CDS
GGGTGATGGTTGTCAAATGG+AGG 0.538756 4_4:+14651603 Msa0671400:CDS
AGCTAAGTGCTTCTCTGCAA+GGG 0.538991 4_4:-14651428 None:intergenic
ATTGGGGTTGGTGAGAGAGA+GGG 0.541347 4_4:-14649533 None:intergenic
TGCAGAGACGGATGCATGGA+TGG 0.541846 4_4:-14649680 None:intergenic
TTGATGCTCCGTCCCGCTGA+CGG 0.542178 4_4:+14653351 Msa0671400:CDS
TTGGAAATTGCATACAAAGC+TGG 0.542667 4_4:+14653567 Msa0671400:CDS
CCACCAGCCTATAGAGCACC+TGG 0.545054 4_4:+14653302 Msa0671400:CDS
GGTTGAGGGTGGTGCAGAGA+CGG 0.545965 4_4:-14649692 None:intergenic
TTTCCAGGTCCTCTTGGTCA+GGG 0.546176 4_4:+14651382 Msa0671400:intron
CGATCACGGTTAAACCAAAA+CGG 0.549172 4_4:-14649877 None:intergenic
TCATAAAGCACATGACCCAT+TGG 0.550537 4_4:-14649826 None:intergenic
AGTGCTTTCTCCCAACCAGC+AGG 0.552628 4_4:-14652765 None:intergenic
AGACAGACCCACATTGATCA+AGG 0.553564 4_4:+14651852 Msa0671400:CDS
GAGAAAATTATTGGAAGCAA+AGG 0.557290 4_4:+14653744 Msa0671400:CDS
GTGGGATTGAGAGAGGTGGG+TGG 0.558444 4_4:-14649641 None:intergenic
ATTGAAGGAGTTGAAAAGGG+TGG 0.558611 4_4:+14653477 Msa0671400:CDS
CTTTCCGCCCTATCCGAAGC+CGG 0.562775 4_4:+14653225 Msa0671400:CDS
GATGGTGGGATTGAGAGAGG+TGG 0.564195 4_4:-14649645 None:intergenic
GGCATTGCTCTTCACAGCCG+TGG 0.567898 4_4:+14653141 Msa0671400:CDS
CTAGAAAGGGCAAGGATAGA+GGG 0.568237 4_4:-14653423 None:intergenic
AAAACTAACCTTGATCAATG+TGG 0.568500 4_4:-14651860 None:intergenic
ATGGTGGGATTGAGAGAGGT+GGG 0.570521 4_4:-14649644 None:intergenic
TGGTGGATGGGGAGGATGTG+AGG 0.572558 4_4:-14649564 None:intergenic
ATTCGGAGAACCATAACCAA+TGG 0.573264 4_4:-14652411 None:intergenic
AAAGGAGAAAGAGAAAGTGA+AGG 0.574240 4_4:-14649443 None:intergenic
GGCTGGATCAACATTCGGGT+GGG 0.578723 4_4:+14653722 Msa0671400:CDS
GCTAGGGTAAGCATTGAGGC+TGG 0.582656 4_4:+14653705 Msa0671400:CDS
GGTTGTCGCCCAAAGAGGAC+TGG 0.584007 4_4:-14649322 None:intergenic
TTTGGAGCTAGTGCTCCTGC+AGG 0.584179 4_4:+14653789 Msa0671400:CDS
AGGTATTGTATATTGGGTGA+TGG 0.586628 4_4:+14651589 Msa0671400:intron
AAGGGCTAAACCAACAGCAT+TGG 0.589425 4_4:-14651410 None:intergenic
AGTGTGCATGGAAGTGCACT+TGG 0.590614 4_4:+14652449 Msa0671400:CDS
GCTGACGGTAACGAAACAGC+TGG 0.590984 4_4:+14653366 Msa0671400:CDS
ACCCTAGCCGTAACAGCAGT+AGG 0.595621 4_4:-14653690 None:intergenic
ATGTGAGGCGCGTAAGATTG+GGG 0.595709 4_4:-14649549 None:intergenic
TTTCGTTACCGTCAGCGGGA+CGG 0.597076 4_4:-14653359 None:intergenic
GTTGAGGTTGTCGCCCAAAG+AGG 0.597888 4_4:-14649327 None:intergenic
TGGGTAAAGAATGGAAACAC+TGG 0.598152 4_4:+14651784 Msa0671400:CDS
GACCGGGAAGAACATTCGCA+AGG 0.598309 4_4:-14652981 None:intergenic
GAAGATGGTGGGATTGAGAG+AGG 0.603956 4_4:-14649648 None:intergenic
ACTCACGATTCAATAGGACT+TGG 0.606593 4_4:+14653264 Msa0671400:CDS
AACAAAGGAAACAACTCTAA+CGG 0.607594 4_4:-14653616 None:intergenic
CCACAAGAAACAATCTTGGA+TGG 0.609450 4_4:+14652489 Msa0671400:CDS
GGTGATGGTTGTCAAATGGA+GGG 0.610444 4_4:+14651604 Msa0671400:CDS
TGGTTGGGAGAAAGCACTAC+CGG 0.612341 4_4:+14652770 Msa0671400:CDS
TGGAGTCGCCACATCCGTGA+GGG 0.615343 4_4:+14652642 Msa0671400:CDS
GTGGTGCAGAGACGGATGCA+TGG 0.615405 4_4:-14649684 None:intergenic
AATGGCACCACGCATGTAGT+CGG 0.615519 4_4:-14653199 None:intergenic
AGGCTGGATCAACATTCGGG+TGG 0.616054 4_4:+14653721 Msa0671400:CDS
CAGACAAAACAAACCGATCA+CGG 0.616101 4_4:-14649891 None:intergenic
TGAGCCTTTCCACGTGCCCG+AGG 0.617304 4_4:+14652517 Msa0671400:CDS
ATCATTCGACTTTAACAATG+TGG 0.618789 4_4:-14654135 None:intergenic
CACAGTATGGAATAAGTCCA+CGG 0.620236 4_4:-14653158 None:intergenic
ATTCAAGAGCAGCACCCTCA+CGG 0.624321 4_4:-14652656 None:intergenic
TACGGCTAGGGTAAGCATTG+AGG 0.627403 4_4:+14653701 Msa0671400:CDS
ACCGGGAAGAACATTCGCAA+GGG 0.627406 4_4:-14652980 None:intergenic
GCACAACCCATAGGTAAACC+AGG 0.634013 4_4:-14649802 None:intergenic
CGATTCAATAGGACTTGGAG+AGG 0.636047 4_4:+14653269 Msa0671400:CDS
TGAATATGAAAAGAAGTACA+AGG 0.638110 4_4:+14652701 Msa0671400:CDS
GAGTCTGTGGTGGTTGAGGG+TGG 0.639091 4_4:-14649703 None:intergenic
GGTTTCGGGTTGCATCGGCA+GGG 0.640091 4_4:-14652936 None:intergenic
AGCTGGAGCATACAAAGTTG+CGG 0.643142 4_4:+14653383 Msa0671400:CDS
TTGGAGTCGCCACATCCGTG+AGG 0.643540 4_4:+14652641 Msa0671400:CDS
GTGCTGCTCTTGAATCTGAG+TGG 0.643988 4_4:+14652664 Msa0671400:CDS
CCCATTGGAGCACAACCCAT+AGG 0.646724 4_4:-14649811 None:intergenic
AACACCGGCTTCGGATAGGG+CGG 0.647980 4_4:-14653229 None:intergenic
GGAATGGGAGCAATCTGCAA+CGG 0.648145 4_4:+14653120 Msa0671400:CDS
TTGGCAATTCCCTGACCAAG+AGG 0.649608 4_4:-14651391 None:intergenic
AATTGCATACAAAGCTGGTG+AGG 0.649789 4_4:+14653572 Msa0671400:CDS
GAGGCGCGTAAGATTGGGGT+TGG 0.650059 4_4:-14649545 None:intergenic
TGCTCACTTGCAGGACACTG+GGG 0.650590 4_4:+14651643 Msa0671400:CDS
CTTCAATAGAAGTTCCGGCA+AGG 0.650965 4_4:-14653461 None:intergenic
GAGAGAAGAGAGGCGCGTGG+TGG 0.652623 4_4:-14649581 None:intergenic
AAAATTCTCAGGGTGTCCAG+GGG 0.654764 4_4:-14651163 None:intergenic
TGGTGGATGGGAGAGAAGAG+AGG 0.660150 4_4:-14649591 None:intergenic
GCACTGCCACCAATCAGACC+GGG 0.661485 4_4:-14652997 None:intergenic
CAACACGATCCGTTTCCTCG+CGG 0.662318 4_4:+14649747 Msa0671400:CDS
TGGGAGAGAAGAGAGGCGCG+TGG 0.663504 4_4:-14649584 None:intergenic
CTCAACGAGAGATGAGTCTG+TGG 0.664640 4_4:-14649716 None:intergenic
GGGTCATGTGCTTTATGATG+AGG 0.665011 4_4:+14649831 Msa0671400:CDS
GGATCTAAGAAAAGAAGGAA+AGG 0.665609 4_4:+14653593 Msa0671400:CDS
CGGATGCATGGATGGCGGTG+TGG 0.677388 4_4:-14649672 None:intergenic
AACGAGAGATGAGTCTGTGG+TGG 0.691080 4_4:-14649713 None:intergenic
AGTCATGACATATATAACAC+CGG 0.699940 4_4:-14653244 None:intergenic
AGAGACGGATGCATGGATGG+CGG 0.734321 4_4:-14649677 None:intergenic
TTTCAACCGAATCAACCGCG+AGG 0.765803 4_4:-14649762 None:intergenic
ATATGAAAAGAAGTACAAGG+AGG 0.782536 4_4:+14652704 Msa0671400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAAAACAACATTTATTT+TGG - chr4_4:14651984-14652003 None:intergenic 10.0%
!!! TATTTTCTATTTTCATGATT+AGG + chr4_4:14651271-14651290 Msa0671400:intron 15.0%
!! ATATTAATTTAGGAGTAAAT+TGG - chr4_4:14652034-14652053 None:intergenic 15.0%
!!! TATGAAAAAAGATAAAGTTT+TGG - chr4_4:14652806-14652825 None:intergenic 15.0%
!!! TTTGAGAATTTTTGTTGTTT+TGG + chr4_4:14650051-14650070 Msa0671400:intron 20.0%
!!! TTTTTGTTGTTTTGGTTTTT+TGG + chr4_4:14650059-14650078 Msa0671400:intron 20.0%
!!! ATTTTAGATTGAATTTGTGT+CGG + chr4_4:14650530-14650549 Msa0671400:intron 20.0%
!!! GAAACATTATTTCTTAAAGT+AGG - chr4_4:14650731-14650750 None:intergenic 20.0%
!!! TGTTTTTGATCTTTGATTTA+TGG + chr4_4:14651012-14651031 Msa0671400:intron 20.0%
!!! GTTTTTGATCTTTGATTTAT+GGG + chr4_4:14651013-14651032 Msa0671400:intron 20.0%
!!! TATTTATTTGCCTTTTCTTT+TGG + chr4_4:14651047-14651066 Msa0671400:intron 20.0%
!!! TTTGTTTTGGTTTGAATTTT+AGG + chr4_4:14651101-14651120 Msa0671400:intron 20.0%
!! ATTAAAATGAAACTCATAAC+AGG - chr4_4:14651244-14651263 None:intergenic 20.0%
!!! TTTCATCTTCTCTAAAATAA+TGG + chr4_4:14651525-14651544 Msa0671400:intron 20.0%
!!! TTTCTATAGGTATTGTATAT+TGG + chr4_4:14651582-14651601 Msa0671400:intron 20.0%
!!! TTCTATAGGTATTGTATATT+GGG + chr4_4:14651583-14651602 Msa0671400:intron 20.0%
!! AAAACAGAATCTTAATATGT+TGG - chr4_4:14651935-14651954 None:intergenic 20.0%
!! TTCAGTAAAAGAAATTACTT+TGG - chr4_4:14652241-14652260 None:intergenic 20.0%
!! TTTCATATAATCTTTACATG+TGG + chr4_4:14652819-14652838 Msa0671400:intron 20.0%
!!! TTTCTCTTTTATTTTTCTTC+TGG + chr4_4:14653907-14653926 Msa0671400:three_prime_UTR 20.0%
!!! ATCATTTTGATTTTGCAGTT+TGG - chr4_4:14649413-14649432 None:intergenic 25.0%
! GAAAATGAGAGAAAATGAAA+AGG - chr4_4:14649464-14649483 None:intergenic 25.0%
! GTAACACACAAAAATTATCT+GGG + chr4_4:14649976-14649995 Msa0671400:intron 25.0%
!! TTTTAGATTGAATTTGTGTC+GGG + chr4_4:14650531-14650550 Msa0671400:intron 25.0%
!! AAATAATGTTTCTGTTGTTG+TGG + chr4_4:14650739-14650758 Msa0671400:intron 25.0%
!! AATAATGTTTCTGTTGTTGT+GGG + chr4_4:14650740-14650759 Msa0671400:intron 25.0%
!! TTACTCTTTTTAACACTCAA+TGG + chr4_4:14650881-14650900 Msa0671400:intron 25.0%
!! TATGAAAAGAGTGTAGTATT+AGG + chr4_4:14650982-14651001 Msa0671400:intron 25.0%
!!! GAAGTGTTGTTATTTTGTTT+TGG + chr4_4:14651088-14651107 Msa0671400:intron 25.0%
! AAAAGAAGTAATACAAGAGT+TGG - chr4_4:14651507-14651526 None:intergenic 25.0%
!!! TGATCAAGGTTAGTTTTAAA+CGG + chr4_4:14651866-14651885 Msa0671400:intron 25.0%
! TTAAACGGCTAAAATATGAT+AGG + chr4_4:14651881-14651900 Msa0671400:intron 25.0%
!!! AACATTTATTTTGGAACTGA+GGG - chr4_4:14651975-14651994 None:intergenic 25.0%
! GATGCACACAATATTAATTT+AGG - chr4_4:14652044-14652063 None:intergenic 25.0%
! CAACACTTAATTAAACTGAT+AGG - chr4_4:14652345-14652364 None:intergenic 25.0%
!! TTTAATTAAGTGTTGTCTGT+TGG + chr4_4:14652350-14652369 Msa0671400:intron 25.0%
!! TGAATATGAAAAGAAGTACA+AGG + chr4_4:14652701-14652720 Msa0671400:CDS 25.0%
!!! AAGTTTTGGAATTTACTTAC+CGG - chr4_4:14652792-14652811 None:intergenic 25.0%
!! CATCAGATTTTTGATCAATT+TGG - chr4_4:14652857-14652876 None:intergenic 25.0%
! TTTGTATGCAATTTCCAATT+CGG - chr4_4:14653565-14653584 None:intergenic 25.0%
! TTGATATATCTACACAGAAA+AGG + chr4_4:14653950-14653969 Msa0671400:three_prime_UTR 25.0%
! TGATATATCTACACAGAAAA+GGG + chr4_4:14653951-14653970 Msa0671400:three_prime_UTR 25.0%
!! TTGTTGCTTGAATAAGAAAA+AGG + chr4_4:14653992-14654011 Msa0671400:three_prime_UTR 25.0%
!!! TTTTGATTTTGCAGTTTGGT+TGG - chr4_4:14649409-14649428 None:intergenic 30.0%
! TTAAACCAAAACGGATTCTT+GGG - chr4_4:14649871-14649890 None:intergenic 30.0%
GGTAACACACAAAAATTATC+TGG + chr4_4:14649975-14649994 Msa0671400:intron 30.0%
!! GGTTGATTTGTTGAAAAGTT+TGG + chr4_4:14650002-14650021 Msa0671400:intron 30.0%
GACATGTATATATGTTGTGT+GGG - chr4_4:14650139-14650158 None:intergenic 30.0%
TGACATGTATATATGTTGTG+TGG - chr4_4:14650140-14650159 None:intergenic 30.0%
AAACACTAATGACACAAACA+TGG - chr4_4:14650250-14650269 None:intergenic 30.0%
! TTGTGTCATTAGTGTTTCAT+AGG + chr4_4:14650253-14650272 Msa0671400:intron 30.0%
AAGAAGTAAACTTGATCAGA+CGG - chr4_4:14650360-14650379 None:intergenic 30.0%
!! ACTAGTTTCATTGTTTTGTC+TGG + chr4_4:14650654-14650673 Msa0671400:intron 30.0%
! TGGTGTCTGTGTTTTATATT+TGG + chr4_4:14650674-14650693 Msa0671400:intron 30.0%
! AATATTGACCTTTTAAGCGA+TGG + chr4_4:14650946-14650965 Msa0671400:intron 30.0%
! ATCTTTGATTTATGGGAACT+TGG + chr4_4:14651020-14651039 Msa0671400:intron 30.0%
! TCTTTGATTTATGGGAACTT+GGG + chr4_4:14651021-14651040 Msa0671400:intron 30.0%
GTTAACAAGTCCAAAAGAAA+AGG - chr4_4:14651060-14651079 None:intergenic 30.0%
AATAACAACACTTCAGTCTA+TGG - chr4_4:14651082-14651101 None:intergenic 30.0%
! ATTTGAAGCAATTTCGTCAA+TGG + chr4_4:14651130-14651149 Msa0671400:CDS 30.0%
! TTTGAAGCAATTTCGTCAAT+GGG + chr4_4:14651131-14651150 Msa0671400:CDS 30.0%
TGATTAGGACATTATGACTT+TGG + chr4_4:14651286-14651305 Msa0671400:intron 30.0%
! CTTTGTTTCATGTAGTCTAT+TGG + chr4_4:14651315-14651334 Msa0671400:intron 30.0%
ATGATCAATGATCTCATTGT+CGG - chr4_4:14651470-14651489 None:intergenic 30.0%
!! TTACGGTACTTGTTTTCTAT+AGG + chr4_4:14651569-14651588 Msa0671400:intron 30.0%
GACAATCACATTTCTATTGA+CGG + chr4_4:14651694-14651713 Msa0671400:CDS 30.0%
!! AGTGTTGAAAAACGTTTTGA+GGG + chr4_4:14651742-14651761 Msa0671400:CDS 30.0%
! CATGTTATTTGGGTAAAGAA+TGG + chr4_4:14651775-14651794 Msa0671400:CDS 30.0%
AAACTAACCTTGATCAATGT+GGG - chr4_4:14651862-14651881 None:intergenic 30.0%
AAAACTAACCTTGATCAATG+TGG - chr4_4:14651863-14651882 None:intergenic 30.0%
!!! CAACATTTATTTTGGAACTG+AGG - chr4_4:14651976-14651995 None:intergenic 30.0%
TTAATAGCCAATAGTGAACA+AGG + chr4_4:14652108-14652127 Msa0671400:intron 30.0%
TAACTATCCTTGTTCACTAT+TGG - chr4_4:14652118-14652137 None:intergenic 30.0%
!!! ATCGCTTAAGGTTTTTTAGA+TGG - chr4_4:14652181-14652200 None:intergenic 30.0%
! ACCTTAAGCGATACTTTTAT+TGG + chr4_4:14652189-14652208 Msa0671400:intron 30.0%
!! TCCAATAAAAGTATCGCTTA+AGG - chr4_4:14652193-14652212 None:intergenic 30.0%
! AAGCGATACTTTTATTGGAA+CGG + chr4_4:14652194-14652213 Msa0671400:intron 30.0%
CTGTAAGAGTTGGATTTATT+CGG - chr4_4:14652431-14652450 None:intergenic 30.0%
TCATATTAATCACAACAGTG+TGG - chr4_4:14652587-14652606 None:intergenic 30.0%
!! AGAATTGCATTTTTGTTTGC+AGG + chr4_4:14652616-14652635 Msa0671400:intron 30.0%
! CTTTTCATATTCAGCAAACT+TGG - chr4_4:14652694-14652713 None:intergenic 30.0%
! ATATGAAAAGAAGTACAAGG+AGG + chr4_4:14652704-14652723 Msa0671400:CDS 30.0%
!!! GTTTTGAAATCTATCATCAC+TGG + chr4_4:14652735-14652754 Msa0671400:CDS 30.0%
! AGTCTGAAATCAAATTGGAA+CGG - chr4_4:14652902-14652921 None:intergenic 30.0%
! GTGTAAGTCTGAAATCAAAT+TGG - chr4_4:14652907-14652926 None:intergenic 30.0%
AGTCATGACATATATAACAC+CGG - chr4_4:14653247-14653266 None:intergenic 30.0%
! AGGCAATTTTTGTCTAGAAA+GGG - chr4_4:14653439-14653458 None:intergenic 30.0%
! TAGGCAATTTTTGTCTAGAA+AGG - chr4_4:14653440-14653459 None:intergenic 30.0%
TTCTATTGAAGGAGTTGAAA+AGG + chr4_4:14653473-14653492 Msa0671400:CDS 30.0%
TCTATTGAAGGAGTTGAAAA+GGG + chr4_4:14653474-14653493 Msa0671400:CDS 30.0%
!!! AAACCTGATGTCATTTTGAT+TGG + chr4_4:14653531-14653550 Msa0671400:CDS 30.0%
AACAAAGGAAACAACTCTAA+CGG - chr4_4:14653619-14653638 None:intergenic 30.0%
! AGTTGTTTCCTTTGTTTCTT+GGG + chr4_4:14653623-14653642 Msa0671400:CDS 30.0%
AAAAAGTTCCCAAGAAACAA+AGG - chr4_4:14653634-14653653 None:intergenic 30.0%
GAGAAAATTATTGGAAGCAA+AGG + chr4_4:14653744-14653763 Msa0671400:CDS 30.0%
GGAACAATATACAAAGAGTT+TGG + chr4_4:14653810-14653829 Msa0671400:CDS 30.0%
ATCATTCGACTTTAACAATG+TGG - chr4_4:14654138-14654157 None:intergenic 30.0%
!!! AGGGAGATTTGTTTTTGTTG+AGG - chr4_4:14649346-14649365 None:intergenic 35.0%
!!! AGTTTGGTTGGTTTTGTAAG+GGG - chr4_4:14649397-14649416 None:intergenic 35.0%
!!! CAGTTTGGTTGGTTTTGTAA+GGG - chr4_4:14649398-14649417 None:intergenic 35.0%
AAAGGAGAAAGAGAAAGTGA+AGG - chr4_4:14649446-14649465 None:intergenic 35.0%
TTCGGTTGAAAAAGCCAATT+CGG + chr4_4:14649774-14649793 Msa0671400:CDS 35.0%
! ATAATCCCAAGAATCCGTTT+TGG + chr4_4:14649863-14649882 Msa0671400:CDS 35.0%
! GTTAAACCAAAACGGATTCT+TGG - chr4_4:14649872-14649891 None:intergenic 35.0%
CACACAAAAATTATCTGGGT+CGG + chr4_4:14649980-14649999 Msa0671400:intron 35.0%
ACACAAAAATTATCTGGGTC+GGG + chr4_4:14649981-14650000 Msa0671400:intron 35.0%
GATACAAACTGACACAAACA+TGG - chr4_4:14650221-14650240 None:intergenic 35.0%
TGTGATTTGATGTGACTGTT+TGG + chr4_4:14650277-14650296 Msa0671400:intron 35.0%
GTGATTTGATGTGACTGTTT+GGG + chr4_4:14650278-14650297 Msa0671400:intron 35.0%
TATGAATCGTCCAATCTTGA+CGG + chr4_4:14650409-14650428 Msa0671400:intron 35.0%
ACTGACACATGTATTTGCAT+AGG + chr4_4:14650604-14650623 Msa0671400:intron 35.0%
TTTCTGTTGTTGTGGGTAAT+GGG + chr4_4:14650747-14650766 Msa0671400:intron 35.0%
ACAGAACTCAAGAATATGCA+AGG - chr4_4:14650790-14650809 None:intergenic 35.0%
CAGGAGTTTCAAAATTCTCA+GGG - chr4_4:14651176-14651195 None:intergenic 35.0%
TAGGACATTATGACTTTGGT+TGG + chr4_4:14651290-14651309 Msa0671400:intron 35.0%
! TCCTTTCTTGCAAATTTTCC+AGG + chr4_4:14651367-14651386 Msa0671400:intron 35.0%
ACCTGGAAAATTTGCAAGAA+AGG - chr4_4:14651371-14651390 None:intergenic 35.0%
TGATCAATGATCTCATTGTC+GGG - chr4_4:14651469-14651488 None:intergenic 35.0%
AGTTGTAGCTGTTATGCTTA+CGG + chr4_4:14651552-14651571 Msa0671400:intron 35.0%
! AGGTATTGTATATTGGGTGA+TGG + chr4_4:14651589-14651608 Msa0671400:intron 35.0%
!!! GAGTGTTGAAAAACGTTTTG+AGG + chr4_4:14651741-14651760 Msa0671400:CDS 35.0%
!!! AAAAACGTTTTGAGGGACTT+GGG + chr4_4:14651749-14651768 Msa0671400:CDS 35.0%
CAGTTGTTATAGATGCATAG+TGG - chr4_4:14652088-14652107 None:intergenic 35.0%
! GATACTTTTATTGGAACGGA+GGG + chr4_4:14652198-14652217 Msa0671400:intron 35.0%
! TTCACAACAACCATTGGTTA+TGG + chr4_4:14652401-14652420 Msa0671400:CDS 35.0%
!! TCCATACTTTTTGACATCCT+CGG - chr4_4:14652537-14652556 None:intergenic 35.0%
CACAACAGTGTGGTATAAAA+TGG - chr4_4:14652577-14652596 None:intergenic 35.0%
!!! CTTTTTCAGCAAGGTCATAT+TGG - chr4_4:14653037-14653056 None:intergenic 35.0%
ATGACCTTGCTGAAAAAGTT+TGG + chr4_4:14653039-14653058 Msa0671400:CDS 35.0%
!!! ATCACCAAACTTTTTCAGCA+AGG - chr4_4:14653046-14653065 None:intergenic 35.0%
!! AGATTTGGTGTTAGAGAACA+TGG + chr4_4:14653099-14653118 Msa0671400:CDS 35.0%
ACAAAAAAGGTTGCACAGTA+TGG - chr4_4:14653174-14653193 None:intergenic 35.0%
GTAGTCGGTGAAAACAAAAA+AGG - chr4_4:14653187-14653206 None:intergenic 35.0%
! ATTTTTGTCTAGAAAGGGCA+AGG - chr4_4:14653434-14653453 None:intergenic 35.0%
AACTCCTTCAATAGAAGTTC+CGG - chr4_4:14653469-14653488 None:intergenic 35.0%
GTTCCAATCAAAATGACATC+AGG - chr4_4:14653537-14653556 None:intergenic 35.0%
!!! GATGTCATTTTGATTGGAAC+TGG + chr4_4:14653537-14653556 Msa0671400:CDS 35.0%
TTGGAAATTGCATACAAAGC+TGG + chr4_4:14653567-14653586 Msa0671400:CDS 35.0%
GGATCTAAGAAAAGAAGGAA+AGG + chr4_4:14653593-14653612 Msa0671400:CDS 35.0%
! GAGTTGTTTCCTTTGTTTCT+TGG + chr4_4:14653622-14653641 Msa0671400:CDS 35.0%
TGAACAATCACAAGCTTACA+AGG + chr4_4:14653656-14653675 Msa0671400:CDS 35.0%
TCTTTGTATATTGTTCCTGC+AGG - chr4_4:14653807-14653826 None:intergenic 35.0%
!!! TCTGGTTTTGCTTTTGCTTT+TGG + chr4_4:14653925-14653944 Msa0671400:three_prime_UTR 35.0%
!!! CTGGTTTTGCTTTTGCTTTT+GGG + chr4_4:14653926-14653945 Msa0671400:three_prime_UTR 35.0%
!!! TTTGGTTGGTTTTGTAAGGG+GGG - chr4_4:14649395-14649414 None:intergenic 40.0%
!!! GTTTGGTTGGTTTTGTAAGG+GGG - chr4_4:14649396-14649415 None:intergenic 40.0%
!!! GCAGTTTGGTTGGTTTTGTA+AGG - chr4_4:14649399-14649418 None:intergenic 40.0%
TCGGTTGAAAAAGCCAATTC+GGG + chr4_4:14649775-14649794 Msa0671400:CDS 40.0%
TCATAAAGCACATGACCCAT+TGG - chr4_4:14649829-14649848 None:intergenic 40.0%
CGATCACGGTTAAACCAAAA+CGG - chr4_4:14649880-14649899 None:intergenic 40.0%
!!! CGTTTTGGTTTAACCGTGAT+CGG + chr4_4:14649878-14649897 Msa0671400:CDS 40.0%
CAGACAAAACAAACCGATCA+CGG - chr4_4:14649894-14649913 None:intergenic 40.0%
!!! TTTGTTTTGTCTGCTGGTCA+TGG + chr4_4:14649901-14649920 Msa0671400:CDS 40.0%
TATGCTTTGCTTCATCTTGC+TGG + chr4_4:14649937-14649956 Msa0671400:CDS 40.0%
! TGATGTGACTGTTTGGGTTT+AGG + chr4_4:14650284-14650303 Msa0671400:intron 40.0%
! ACTGTTTGGGTTTAGGAGAT+TGG + chr4_4:14650291-14650310 Msa0671400:intron 40.0%
TGTCAAAGTGATCAGGCATT+TGG + chr4_4:14650323-14650342 Msa0671400:intron 40.0%
GTCAAAGTGATCAGGCATTT+GGG + chr4_4:14650324-14650343 Msa0671400:intron 40.0%
!! AAAAGGTGTCTATGTCGTCT+TGG - chr4_4:14650575-14650594 None:intergenic 40.0%
GTTTCTGTTGTTGTGGGTAA+TGG + chr4_4:14650746-14650765 Msa0671400:intron 40.0%
CCATCTAACCATCGCTTAAA+AGG - chr4_4:14650957-14650976 None:intergenic 40.0%
! CCTTTTAAGCGATGGTTAGA+TGG + chr4_4:14650954-14650973 Msa0671400:intron 40.0%
CCAGGAGTTTCAAAATTCTC+AGG - chr4_4:14651177-14651196 None:intergenic 40.0%
!!! CCTGAGAATTTTGAAACTCC+TGG + chr4_4:14651174-14651193 Msa0671400:CDS 40.0%
GAATTGAAGTCACAACAGGT+TGG + chr4_4:14651196-14651215 Msa0671400:intron 40.0%
!! ATTGTCGGGCTTGTTAAATC+TGG - chr4_4:14651455-14651474 None:intergenic 40.0%
! ATTGGGTGATGGTTGTCAAA+TGG + chr4_4:14651600-14651619 Msa0671400:CDS 40.0%
! ACTCTCAGTGAAAGCGATTT+TGG - chr4_4:14651725-14651744 None:intergenic 40.0%
!!! GAAAAACGTTTTGAGGGACT+TGG + chr4_4:14651748-14651767 Msa0671400:CDS 40.0%
! ACTTGGGTGGCATGTTATTT+GGG + chr4_4:14651765-14651784 Msa0671400:CDS 40.0%
TGGGTAAAGAATGGAAACAC+TGG + chr4_4:14651784-14651803 Msa0671400:CDS 40.0%
TGAAATTCGTGCTGCCATTA+AGG + chr4_4:14651813-14651832 Msa0671400:CDS 40.0%
! GACAGCTTTTGCTTCCTTAA+TGG - chr4_4:14651830-14651849 None:intergenic 40.0%
! CGATACTTTTATTGGAACGG+AGG + chr4_4:14652197-14652216 Msa0671400:intron 40.0%
!! TATCTAGCTTTCAGCTTCTC+GGG - chr4_4:14652280-14652299 None:intergenic 40.0%
!! CTATCTAGCTTTCAGCTTCT+CGG - chr4_4:14652281-14652300 None:intergenic 40.0%
ATTCGGAGAACCATAACCAA+TGG - chr4_4:14652414-14652433 None:intergenic 40.0%
TCTTGTGGCATCAACTTCTT+TGG - chr4_4:14652477-14652496 None:intergenic 40.0%
GATGCCACAAGAAACAATCT+TGG + chr4_4:14652485-14652504 Msa0671400:CDS 40.0%
! CCATCCAAGATTGTTTCTTG+TGG - chr4_4:14652492-14652511 None:intergenic 40.0%
CCACAAGAAACAATCTTGGA+TGG + chr4_4:14652489-14652508 Msa0671400:CDS 40.0%
!! CCATACTTTTTGACATCCTC+GGG - chr4_4:14652536-14652555 None:intergenic 40.0%
!! GCATTTTTGTTTGCAGGCAT+TGG + chr4_4:14652622-14652641 Msa0671400:intron 40.0%
! CATTAAGGTTTTGCTGCGAT+AGG - chr4_4:14652960-14652979 None:intergenic 40.0%
AATCTAACATTACGCTCTGC+TGG - chr4_4:14653084-14653103 None:intergenic 40.0%
GCAGAGCGTAATGTTAGATT+TGG + chr4_4:14653084-14653103 Msa0671400:CDS 40.0%
! TGGTGTTAGAGAACATGGAA+TGG + chr4_4:14653104-14653123 Msa0671400:CDS 40.0%
GGTGTTAGAGAACATGGAAT+GGG + chr4_4:14653105-14653124 Msa0671400:CDS 40.0%
CACAGTATGGAATAAGTCCA+CGG - chr4_4:14653161-14653180 None:intergenic 40.0%
!! GACATATATAACACCGGCTT+CGG - chr4_4:14653241-14653260 None:intergenic 40.0%
GTCATGACTCACGATTCAAT+AGG + chr4_4:14653258-14653277 Msa0671400:CDS 40.0%
ACTCACGATTCAATAGGACT+TGG + chr4_4:14653264-14653283 Msa0671400:CDS 40.0%
TCAAGATATTTGGCATTGCC+CGG - chr4_4:14653335-14653354 None:intergenic 40.0%
CAAAAATTGCCTAACCTTGC+CGG + chr4_4:14653447-14653466 Msa0671400:CDS 40.0%
ATTGAAGGAGTTGAAAAGGG+TGG + chr4_4:14653477-14653496 Msa0671400:CDS 40.0%
AATTGCATACAAAGCTGGTG+AGG + chr4_4:14653572-14653591 Msa0671400:CDS 40.0%
GGTGAGGATCTAAGAAAAGA+AGG + chr4_4:14653588-14653607 Msa0671400:CDS 40.0%
TGTTCTTCCTACTGCTGTTA+CGG + chr4_4:14653683-14653702 Msa0671400:CDS 40.0%
ATTGAGGCTGGATCAACATT+CGG + chr4_4:14653717-14653736 Msa0671400:CDS 40.0%
TTCGGGTGGGAGAAAATTAT+TGG + chr4_4:14653735-14653754 Msa0671400:CDS 40.0%
GGAAGCAAAGGAAAAGCAAT+CGG + chr4_4:14653756-14653775 Msa0671400:CDS 40.0%
ATGTGGCAACACAACTCAAT+TGG - chr4_4:14654121-14654140 None:intergenic 40.0%
TACACTGAACCAGTCCTCTT+TGG + chr4_4:14649313-14649332 Msa0671400:five_prime_UTR 45.0%
ACACTGAACCAGTCCTCTTT+GGG + chr4_4:14649314-14649333 Msa0671400:five_prime_UTR 45.0%
!!! TTGGTTGGTTTTGTAAGGGG+GGG - chr4_4:14649394-14649413 None:intergenic 45.0%
TAAACCAGGATGACCCGAAT+TGG - chr4_4:14649791-14649810 None:intergenic 45.0%
GGTCATCCTGGTTTACCTAT+GGG + chr4_4:14649796-14649815 Msa0671400:CDS 45.0%
GGGTCATGTGCTTTATGATG+AGG + chr4_4:14649831-14649850 Msa0671400:CDS 45.0%
!!! GATCGGTTTGTTTTGTCTGC+TGG + chr4_4:14649895-14649914 Msa0671400:CDS 45.0%
TGCTGGATATGACAGTGTTC+AGG + chr4_4:14649954-14649973 Msa0671400:CDS 45.0%
TCTCCACTGTCAAAGTGATC+AGG + chr4_4:14650316-14650335 Msa0671400:intron 45.0%
ATGCCTGATCACTTTGACAG+TGG - chr4_4:14650322-14650341 None:intergenic 45.0%
! TGATCAGGCATTTGGGACAT+TGG + chr4_4:14650331-14650350 Msa0671400:intron 45.0%
ATCGTCCAATCTTGACGGAA+CGG + chr4_4:14650414-14650433 Msa0671400:intron 45.0%
ACGGCTACTAATGTCACGAA+AGG + chr4_4:14650433-14650452 Msa0671400:intron 45.0%
ACTACCAGAACCCAAAGATC+AGG - chr4_4:14650481-14650500 None:intergenic 45.0%
! TGATCTTTGGGTTCTGGTAG+TGG + chr4_4:14650480-14650499 Msa0671400:intron 45.0%
! GATCTTTGGGTTCTGGTAGT+GGG + chr4_4:14650481-14650500 Msa0671400:intron 45.0%
GTGTCGGGTATGACACATAT+TGG + chr4_4:14650546-14650565 Msa0671400:intron 45.0%
! GTGTCAGTGTCGAACACAAA+AGG - chr4_4:14650592-14650611 None:intergenic 45.0%
! AAAATTCTCAGGGTGTCCAG+GGG - chr4_4:14651166-14651185 None:intergenic 45.0%
! CAAAATTCTCAGGGTGTCCA+GGG - chr4_4:14651167-14651186 None:intergenic 45.0%
! TCAAAATTCTCAGGGTGTCC+AGG - chr4_4:14651168-14651187 None:intergenic 45.0%
CCTGTTGTGACTTCAATTCC+AGG - chr4_4:14651195-14651214 None:intergenic 45.0%
CCTGGAATTGAAGTCACAAC+AGG + chr4_4:14651192-14651211 Msa0671400:CDS 45.0%
! GCAAATTTTCCAGGTCCTCT+TGG + chr4_4:14651376-14651395 Msa0671400:intron 45.0%
AAGGGCTAAACCAACAGCAT+TGG - chr4_4:14651413-14651432 None:intergenic 45.0%
AGCTAAGTGCTTCTCTGCAA+GGG - chr4_4:14651431-14651450 None:intergenic 45.0%
! GGTGATGGTTGTCAAATGGA+GGG + chr4_4:14651604-14651623 Msa0671400:CDS 45.0%
! AATGAAGCTTGCTCACTTGC+AGG + chr4_4:14651634-14651653 Msa0671400:CDS 45.0%
GACTTGGGTGGCATGTTATT+TGG + chr4_4:14651764-14651783 Msa0671400:CDS 45.0%
AGACAGACCCACATTGATCA+AGG + chr4_4:14651852-14651871 Msa0671400:CDS 45.0%
!! ATCTAGCTTTCAGCTTCTCG+GGG - chr4_4:14652279-14652298 None:intergenic 45.0%
GGTTGTTGTGAACTGTGGAA+TGG - chr4_4:14652393-14652412 None:intergenic 45.0%
CCAATGGTTGTTGTGAACTG+TGG - chr4_4:14652398-14652417 None:intergenic 45.0%
CCACAGTTCACAACAACCAT+TGG + chr4_4:14652395-14652414 Msa0671400:intron 45.0%
TCCAACTCTTACAGTGTGCA+TGG + chr4_4:14652437-14652456 Msa0671400:CDS 45.0%
TCCATGCACACTGTAAGAGT+TGG - chr4_4:14652441-14652460 None:intergenic 45.0%
CCCGAGGATGTCAAAAAGTA+TGG + chr4_4:14652533-14652552 Msa0671400:intron 45.0%
! GTTTTGCTGCGATAGGTTTC+GGG - chr4_4:14652953-14652972 None:intergenic 45.0%
! GGTTTTGCTGCGATAGGTTT+CGG - chr4_4:14652954-14652973 None:intergenic 45.0%
!! GAACATTCGCAAGGGCATTA+AGG - chr4_4:14652975-14652994 None:intergenic 45.0%
AATGTTCTTCCCGGTCTGAT+TGG + chr4_4:14652988-14653007 Msa0671400:CDS 45.0%
!! TATAACACCGGCTTCGGATA+GGG - chr4_4:14653235-14653254 None:intergenic 45.0%
!! ATATAACACCGGCTTCGGAT+AGG - chr4_4:14653236-14653255 None:intergenic 45.0%
CGATTCAATAGGACTTGGAG+AGG + chr4_4:14653269-14653288 Msa0671400:CDS 45.0%
TCAATAGGACTTGGAGAGGA+TGG + chr4_4:14653273-14653292 Msa0671400:CDS 45.0%
! GGACGGAGCATCAAGATATT+TGG - chr4_4:14653345-14653364 None:intergenic 45.0%
AGCTGGAGCATACAAAGTTG+CGG + chr4_4:14653383-14653402 Msa0671400:CDS 45.0%
ACAAAGTTGCGGTGCTTAAC+AGG + chr4_4:14653394-14653413 Msa0671400:CDS 45.0%
CTAGAAAGGGCAAGGATAGA+GGG - chr4_4:14653426-14653445 None:intergenic 45.0%
TCTAGAAAGGGCAAGGATAG+AGG - chr4_4:14653427-14653446 None:intergenic 45.0%
ATAGAAGTTCCGGCAAGGTT+AGG - chr4_4:14653459-14653478 None:intergenic 45.0%
CTTCAATAGAAGTTCCGGCA+AGG - chr4_4:14653464-14653483 None:intergenic 45.0%
CTTGCCGGAACTTCTATTGA+AGG + chr4_4:14653462-14653481 Msa0671400:CDS 45.0%
ATCGTCTCTGACAACTCAAC+AGG + chr4_4:14653504-14653523 Msa0671400:CDS 45.0%
! GATTGGAACTGGTTCCGAAT+TGG + chr4_4:14653548-14653567 Msa0671400:CDS 45.0%
TTGAGGCTGGATCAACATTC+GGG + chr4_4:14653718-14653737 Msa0671400:CDS 45.0%
!!! GCAATCGGCATTGATCGTTT+TGG + chr4_4:14653771-14653790 Msa0671400:CDS 45.0%
AGAGGGAGAGAGAGAGAGAA+GGG - chr4_4:14649365-14649384 None:intergenic 50.0%
!!! TTGGTTTTGTAAGGGGGGGA+GGG - chr4_4:14649390-14649409 None:intergenic 50.0%
!! ATTGGGGTTGGTGAGAGAGA+GGG - chr4_4:14649536-14649555 None:intergenic 50.0%
ATGTGAGGCGCGTAAGATTG+GGG - chr4_4:14649552-14649571 None:intergenic 50.0%
GATGTGAGGCGCGTAAGATT+GGG - chr4_4:14649553-14649572 None:intergenic 50.0%
! ATGGTGGGATTGAGAGAGGT+GGG - chr4_4:14649647-14649666 None:intergenic 50.0%
!! GAAGATGGTGGGATTGAGAG+AGG - chr4_4:14649651-14649670 None:intergenic 50.0%
GATGAGTCTGTGGTGGTTGA+GGG - chr4_4:14649709-14649728 None:intergenic 50.0%
AGATGAGTCTGTGGTGGTTG+AGG - chr4_4:14649710-14649729 None:intergenic 50.0%
AACGAGAGATGAGTCTGTGG+TGG - chr4_4:14649716-14649735 None:intergenic 50.0%
CTCAACGAGAGATGAGTCTG+TGG - chr4_4:14649719-14649738 None:intergenic 50.0%
TTTCAACCGAATCAACCGCG+AGG - chr4_4:14649765-14649784 None:intergenic 50.0%
AAAGCCAATTCGGGTCATCC+TGG + chr4_4:14649784-14649803 Msa0671400:CDS 50.0%
GGGTCATCCTGGTTTACCTA+TGG + chr4_4:14649795-14649814 Msa0671400:CDS 50.0%
GCACAACCCATAGGTAAACC+AGG - chr4_4:14649805-14649824 None:intergenic 50.0%
! ACCTATGGGTTGTGCTCCAA+TGG + chr4_4:14649810-14649829 Msa0671400:CDS 50.0%
! CCTATGGGTTGTGCTCCAAT+GGG + chr4_4:14649811-14649830 Msa0671400:CDS 50.0%
AGTAGCCGTTCCGTCAAGAT+TGG - chr4_4:14650422-14650441 None:intergenic 50.0%
ACGAAAGGAAGTCTGACTGC+CGG + chr4_4:14650448-14650467 Msa0671400:intron 50.0%
ACCAGAACCCAAAGATCAGG+TGG - chr4_4:14650478-14650497 None:intergenic 50.0%
! TTTTCCAGGTCCTCTTGGTC+AGG + chr4_4:14651381-14651400 Msa0671400:intron 50.0%
TTTCCAGGTCCTCTTGGTCA+GGG + chr4_4:14651382-14651401 Msa0671400:intron 50.0%
TTGGCAATTCCCTGACCAAG+AGG - chr4_4:14651394-14651413 None:intergenic 50.0%
CAGGGAATTGCCAATGCTGT+TGG + chr4_4:14651400-14651419 Msa0671400:CDS 50.0%
CAGCTAAGTGCTTCTCTGCA+AGG - chr4_4:14651432-14651451 None:intergenic 50.0%
! GGGTGATGGTTGTCAAATGG+AGG + chr4_4:14651603-14651622 Msa0671400:CDS 50.0%
TTGCTCACTTGCAGGACACT+GGG + chr4_4:14651642-14651661 Msa0671400:CDS 50.0%
!!! AACGTTTTGAGGGACTTGGG+TGG + chr4_4:14651752-14651771 Msa0671400:CDS 50.0%
!! TCTAGCTTTCAGCTTCTCGG+GGG - chr4_4:14652278-14652297 None:intergenic 50.0%
! AGTGTGCATGGAAGTGCACT+TGG + chr4_4:14652449-14652468 Msa0671400:CDS 50.0%
ATTCAAGAGCAGCACCCTCA+CGG - chr4_4:14652659-14652678 None:intergenic 50.0%
! GTGCTGCTCTTGAATCTGAG+TGG + chr4_4:14652664-14652683 Msa0671400:CDS 50.0%
ATCACTGGCGATTTACCTGC+TGG + chr4_4:14652750-14652769 Msa0671400:CDS 50.0%
! TGGCGATTTACCTGCTGGTT+GGG + chr4_4:14652755-14652774 Msa0671400:CDS 50.0%
!! TGGTTGGGAGAAAGCACTAC+CGG + chr4_4:14652770-14652789 Msa0671400:CDS 50.0%
!! CGATAGGTTTCGGGTTGCAT+CGG - chr4_4:14652944-14652963 None:intergenic 50.0%
ACCGGGAAGAACATTCGCAA+GGG - chr4_4:14652983-14653002 None:intergenic 50.0%
GCTCTGCTGGAGAATCACTT+TGG - chr4_4:14653071-14653090 None:intergenic 50.0%
GGAATGGGAGCAATCTGCAA+CGG + chr4_4:14653120-14653139 Msa0671400:CDS 50.0%
!! GTTTTCACCGACTACATGCG+TGG + chr4_4:14653192-14653211 Msa0671400:CDS 50.0%
AATGGCACCACGCATGTAGT+CGG - chr4_4:14653202-14653221 None:intergenic 50.0%
!! ACTACATGCGTGGTGCCATT+AGG + chr4_4:14653202-14653221 Msa0671400:CDS 50.0%
AAGCTTGCCAGGTGCTCTAT+AGG - chr4_4:14653312-14653331 None:intergenic 50.0%
! AGCTGTTTCGTTACCGTCAG+CGG - chr4_4:14653367-14653386 None:intergenic 50.0%
TTCCTACTGCTGTTACGGCT+AGG + chr4_4:14653688-14653707 Msa0671400:CDS 50.0%
TCCTACTGCTGTTACGGCTA+GGG + chr4_4:14653689-14653708 Msa0671400:CDS 50.0%
! TACGGCTAGGGTAAGCATTG+AGG + chr4_4:14653701-14653720 Msa0671400:CDS 50.0%
GTTGAGGTTGTCGCCCAAAG+AGG - chr4_4:14649330-14649349 None:intergenic 55.0%
GAGAGGGAGAGAGAGAGAGA+AGG - chr4_4:14649366-14649385 None:intergenic 55.0%
!!! GTTGGTTTTGTAAGGGGGGG+AGG - chr4_4:14649391-14649410 None:intergenic 55.0%
! GTTGGTGAGAGAGAGGGAAG+TGG - chr4_4:14649530-14649549 None:intergenic 55.0%
!! GATTGGGGTTGGTGAGAGAG+AGG - chr4_4:14649537-14649556 None:intergenic 55.0%
GGATGTGAGGCGCGTAAGAT+TGG - chr4_4:14649554-14649573 None:intergenic 55.0%
! TGGTGGATGGGAGAGAAGAG+AGG - chr4_4:14649594-14649613 None:intergenic 55.0%
!! GGTTGAGGGTGATGGTGGAT+GGG - chr4_4:14649606-14649625 None:intergenic 55.0%
GATTGAGAGAGGTGGGTGGT+GGG - chr4_4:14649640-14649659 None:intergenic 55.0%
!! GATGGTGGGATTGAGAGAGG+TGG - chr4_4:14649648-14649667 None:intergenic 55.0%
AGAGACGGATGCATGGATGG+CGG - chr4_4:14649680-14649699 None:intergenic 55.0%
TGCAGAGACGGATGCATGGA+TGG - chr4_4:14649683-14649702 None:intergenic 55.0%
CAACACGATCCGTTTCCTCG+CGG + chr4_4:14649747-14649766 Msa0671400:CDS 55.0%
CCGAATCAACCGCGAGGAAA+CGG - chr4_4:14649759-14649778 None:intergenic 55.0%
CCGTTTCCTCGCGGTTGATT+CGG + chr4_4:14649756-14649775 Msa0671400:CDS 55.0%
CCCATTGGAGCACAACCCAT+AGG - chr4_4:14649814-14649833 None:intergenic 55.0%
CGAAAGGAAGTCTGACTGCC+GGG + chr4_4:14650449-14650468 Msa0671400:intron 55.0%
CCAAAGATCAGGTGGCTTCC+CGG - chr4_4:14650470-14650489 None:intergenic 55.0%
CGGGAAGCCACCTGATCTTT+GGG + chr4_4:14650468-14650487 Msa0671400:intron 55.0%
! GCCACCTGATCTTTGGGTTC+TGG + chr4_4:14650474-14650493 Msa0671400:intron 55.0%
ATTCCCTGACCAAGAGGACC+TGG - chr4_4:14651388-14651407 None:intergenic 55.0%
CTTGCTCACTTGCAGGACAC+TGG + chr4_4:14651641-14651660 Msa0671400:CDS 55.0%
TGCTCACTTGCAGGACACTG+GGG + chr4_4:14651643-14651662 Msa0671400:CDS 55.0%
TTGCAGGACACTGGGGACTA+GGG + chr4_4:14651650-14651669 Msa0671400:CDS 55.0%
GGCACGTGGAAAGGCTCATA+TGG - chr4_4:14652515-14652534 None:intergenic 55.0%
! TTTTGACATCCTCGGGCACG+TGG - chr4_4:14652529-14652548 None:intergenic 55.0%
CTGGCGATTTACCTGCTGGT+TGG + chr4_4:14652754-14652773 Msa0671400:CDS 55.0%
AGTGCTTTCTCCCAACCAGC+AGG - chr4_4:14652768-14652787 None:intergenic 55.0%
GCCCTTGCGAATGTTCTTCC+CGG + chr4_4:14652979-14652998 Msa0671400:CDS 55.0%
GACCGGGAAGAACATTCGCA+AGG - chr4_4:14652984-14653003 None:intergenic 55.0%
GTTCTTCCCGGTCTGATTGG+TGG + chr4_4:14652991-14653010 Msa0671400:CDS 55.0%
TGCACTGCCACCAATCAGAC+CGG - chr4_4:14653001-14653020 None:intergenic 55.0%
GGATAGGGCGGAAAGCCTAA+TGG - chr4_4:14653220-14653239 None:intergenic 55.0%
! TGCTCTATAGGCTGGTGGGT+TGG - chr4_4:14653300-14653319 None:intergenic 55.0%
CAGGTGCTCTATAGGCTGGT+GGG - chr4_4:14653304-14653323 None:intergenic 55.0%
TTGCCAGGTGCTCTATAGGC+TGG - chr4_4:14653308-14653327 None:intergenic 55.0%
! TAGAGCACCTGGCAAGCTTC+CGG + chr4_4:14653313-14653332 Msa0671400:CDS 55.0%
TTTCGTTACCGTCAGCGGGA+CGG - chr4_4:14653362-14653381 None:intergenic 55.0%
! GCTGTTTCGTTACCGTCAGC+GGG - chr4_4:14653366-14653385 None:intergenic 55.0%
GCTGACGGTAACGAAACAGC+TGG + chr4_4:14653366-14653385 Msa0671400:CDS 55.0%
ACCCTAGCCGTAACAGCAGT+AGG - chr4_4:14653693-14653712 None:intergenic 55.0%
!! GCTAGGGTAAGCATTGAGGC+TGG + chr4_4:14653705-14653724 Msa0671400:CDS 55.0%
AGGCTGGATCAACATTCGGG+TGG + chr4_4:14653721-14653740 Msa0671400:CDS 55.0%
GGCTGGATCAACATTCGGGT+GGG + chr4_4:14653722-14653741 Msa0671400:CDS 55.0%
! TTTGGAGCTAGTGCTCCTGC+AGG + chr4_4:14653789-14653808 Msa0671400:CDS 55.0%
GGTTGTCGCCCAAAGAGGAC+TGG - chr4_4:14649325-14649344 None:intergenic 60.0%
GAGGCGCGTAAGATTGGGGT+TGG - chr4_4:14649548-14649567 None:intergenic 60.0%
! TGGTGGATGGGGAGGATGTG+AGG - chr4_4:14649567-14649586 None:intergenic 60.0%
!! AAGAGAGGCGCGTGGTGGAT+GGG - chr4_4:14649579-14649598 None:intergenic 60.0%
!! CGGTTGAGGGTGATGGTGGA+TGG - chr4_4:14649607-14649626 None:intergenic 60.0%
GGATTGAGAGAGGTGGGTGG+TGG - chr4_4:14649641-14649660 None:intergenic 60.0%
GTGGGATTGAGAGAGGTGGG+TGG - chr4_4:14649644-14649663 None:intergenic 60.0%
GTGGTGCAGAGACGGATGCA+TGG - chr4_4:14649687-14649706 None:intergenic 60.0%
GGTTGAGGGTGGTGCAGAGA+CGG - chr4_4:14649695-14649714 None:intergenic 60.0%
GAGTCTGTGGTGGTTGAGGG+TGG - chr4_4:14649706-14649725 None:intergenic 60.0%
CCGGGAAGCCACCTGATCTT+TGG + chr4_4:14650467-14650486 Msa0671400:intron 60.0%
CAATGGGAGAGCAGAACCCC+TGG + chr4_4:14651147-14651166 Msa0671400:CDS 60.0%
CTTGCAGGACACTGGGGACT+AGG + chr4_4:14651649-14651668 Msa0671400:CDS 60.0%
ACATCCTCGGGCACGTGGAA+AGG - chr4_4:14652524-14652543 None:intergenic 60.0%
TTGGAGTCGCCACATCCGTG+AGG + chr4_4:14652641-14652660 Msa0671400:CDS 60.0%
TGGAGTCGCCACATCCGTGA+GGG + chr4_4:14652642-14652661 Msa0671400:CDS 60.0%
! GTTGCATCGGCAGGGATCTC+TGG - chr4_4:14652931-14652950 None:intergenic 60.0%
!! GGTTTCGGGTTGCATCGGCA+GGG - chr4_4:14652939-14652958 None:intergenic 60.0%
!! AGGTTTCGGGTTGCATCGGC+AGG - chr4_4:14652940-14652959 None:intergenic 60.0%
GCACTGCCACCAATCAGACC+GGG - chr4_4:14653000-14653019 None:intergenic 60.0%
GGCATTGCTCTTCACAGCCG+TGG + chr4_4:14653141-14653160 Msa0671400:CDS 60.0%
CTTTCCGCCCTATCCGAAGC+CGG + chr4_4:14653225-14653244 Msa0671400:CDS 60.0%
!! AACACCGGCTTCGGATAGGG+CGG - chr4_4:14653232-14653251 None:intergenic 60.0%
CCAGGTGCTCTATAGGCTGG+TGG - chr4_4:14653305-14653324 None:intergenic 60.0%
! CCACCAGCCTATAGAGCACC+TGG + chr4_4:14653302-14653321 Msa0671400:CDS 60.0%
! AGAGCACCTGGCAAGCTTCC+GGG + chr4_4:14653314-14653333 Msa0671400:CDS 60.0%
TTGATGCTCCGTCCCGCTGA+CGG + chr4_4:14653351-14653370 Msa0671400:CDS 60.0%
GTAAGGGGGGGAGGGAGAGA+GGG - chr4_4:14649382-14649401 None:intergenic 65.0%
TGTAAGGGGGGGAGGGAGAG+AGG - chr4_4:14649383-14649402 None:intergenic 65.0%
!! AGAGAGGCGCGTGGTGGATG+GGG - chr4_4:14649578-14649597 None:intergenic 65.0%
! GAAGAGAGGCGCGTGGTGGA+TGG - chr4_4:14649580-14649599 None:intergenic 65.0%
! GAGAGAAGAGAGGCGCGTGG+TGG - chr4_4:14649584-14649603 None:intergenic 65.0%
! TGGGAGAGAAGAGAGGCGCG+TGG - chr4_4:14649587-14649606 None:intergenic 65.0%
! GGTGCGGTTGAGGGTGATGG+TGG - chr4_4:14649611-14649630 None:intergenic 65.0%
GTGGGTGCGGTTGAGGGTGA+TGG - chr4_4:14649614-14649633 None:intergenic 65.0%
! GGGAGTGTGGGTGCGGTTGA+GGG - chr4_4:14649620-14649639 None:intergenic 65.0%
! TGGGAGTGTGGGTGCGGTTG+AGG - chr4_4:14649621-14649640 None:intergenic 65.0%
!! GAGGTGGGTGGTGGGAGTGT+GGG - chr4_4:14649632-14649651 None:intergenic 65.0%
!! AGAGGTGGGTGGTGGGAGTG+TGG - chr4_4:14649633-14649652 None:intergenic 65.0%
GGCGGTGTGGCGAAGATGGT+GGG - chr4_4:14649662-14649681 None:intergenic 65.0%
TGGCGGTGTGGCGAAGATGG+TGG - chr4_4:14649663-14649682 None:intergenic 65.0%
! GGATGGCGGTGTGGCGAAGA+TGG - chr4_4:14649666-14649685 None:intergenic 65.0%
! CGGATGCATGGATGGCGGTG+TGG - chr4_4:14649675-14649694 None:intergenic 65.0%
TGAGCCTTTCCACGTGCCCG+AGG + chr4_4:14652517-14652536 Msa0671400:CDS 65.0%
GAGCAGCACCCTCACGGATG+TGG - chr4_4:14652653-14652672 None:intergenic 65.0%
GCATTGCCCGGAAGCTTGCC+AGG - chr4_4:14653323-14653342 None:intergenic 65.0%
!! GGGTGGTGGGAGTGTGGGTG+CGG - chr4_4:14649627-14649646 None:intergenic 70.0%
!! GAGGCGCGTGGTGGATGGGG+AGG - chr4_4:14649575-14649594 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 14649312 14654218 14649312 ID=Msa0671400;Name=Msa0671400
chr4_4 mRNA 14649312 14654218 14649312 ID=Msa0671400-mRNA-1;Parent=Msa0671400;Name=Msa0671400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=202|1|1|1|1|1|7|340|734
chr4_4 exon 14649312 14649975 14649312 ID=Msa0671400-mRNA-1:exon:4481;Parent=Msa0671400-mRNA-1
chr4_4 exon 14651123 14651213 14651123 ID=Msa0671400-mRNA-1:exon:4482;Parent=Msa0671400-mRNA-1
chr4_4 exon 14651389 14651494 14651389 ID=Msa0671400-mRNA-1:exon:4483;Parent=Msa0671400-mRNA-1
chr4_4 exon 14651591 14651873 14651591 ID=Msa0671400-mRNA-1:exon:4484;Parent=Msa0671400-mRNA-1
chr4_4 exon 14652401 14652549 14652401 ID=Msa0671400-mRNA-1:exon:4485;Parent=Msa0671400-mRNA-1
chr4_4 exon 14652638 14652791 14652638 ID=Msa0671400-mRNA-1:exon:4486;Parent=Msa0671400-mRNA-1
chr4_4 exon 14652919 14654218 14652919 ID=Msa0671400-mRNA-1:exon:4487;Parent=Msa0671400-mRNA-1
chr4_4 five_prime_UTR 14649312 14649513 14649312 ID=Msa0671400-mRNA-1:five_prime_utr;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14649514 14649975 14649514 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14651123 14651213 14651123 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14651389 14651494 14651389 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14651591 14651873 14651591 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14652401 14652549 14652401 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14652638 14652791 14652638 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 CDS 14652919 14653878 14652919 ID=Msa0671400-mRNA-1:cds;Parent=Msa0671400-mRNA-1
chr4_4 three_prime_UTR 14653879 14654218 14653879 ID=Msa0671400-mRNA-1:three_prime_utr;Parent=Msa0671400-mRNA-1
Gene Sequence

>Msa0671400

ATGTCTTCAACTTCCACTTCCCTCTCTCTCACCAACCCCAATCTTACGCGCCTCACATCCTCCCCATCCACCACGCGCCTCTCTTCTCTCCCATCCACCATCACCCTCAACCGCACCCACACTCCCACCACCCACCTCTCTCAATCCCACCATCTTCGCCACACCGCCATCCATGCATCCGTCTCTGCACCACCCTCAACCACCACAGACTCATCTCTCGTTGAGAAATCAGTCAACACGATCCGTTTCCTCGCGGTTGATTCGGTTGAAAAAGCCAATTCGGGTCATCCTGGTTTACCTATGGGTTGTGCTCCAATGGGTCATGTGCTTTATGATGAGGTTATGAGATATAATCCCAAGAATCCGTTTTGGTTTAACCGTGATCGGTTTGTTTTGTCTGCTGGTCATGGTTGTATGCTTCAGTATGCTTTGCTTCATCTTGCTGGATATGACAGTGTTCAGGTAGAAGATTTGAAGCAATTTCGTCAATGGGAGAGCAGAACCCCTGGACACCCTGAGAATTTTGAAACTCCTGGAATTGAAGTCACAACAGGTCCTCTTGGTCAGGGAATTGCCAATGCTGTTGGTTTAGCCCTTGCAGAGAAGCACTTAGCTGCCAGATTTAACAAGCCCGACAATGAGATCATTGATCATTATACGTATTGTATATTGGGTGATGGTTGTCAAATGGAGGGAATTGCAAATGAAGCTTGCTCACTTGCAGGACACTGGGGACTAGGGAAGCTAATAGCATTTTACGATGACAATCACATTTCTATTGACGGTGACACCAAAATCGCTTTCACTGAGAGTGTTGAAAAACGTTTTGAGGGACTTGGGTGGCATGTTATTTGGGTAAAGAATGGAAACACTGGCTTTGATGAAATTCGTGCTGCCATTAAGGAAGCAAAAGCTGTCAAAGACAGACCCACATTGATCAAGTTCACAACAACCATTGGTTATGGTTCTCCGAATAAATCCAACTCTTACAGTGTGCATGGAAGTGCACTTGGTGCCAAAGAAGTTGATGCCACAAGAAACAATCTTGGATGGCCATATGAGCCTTTCCACGTGCCCGAGGATGTCAAAAAGCATTGGAGTCGCCACATCCGTGAGGGTGCTGCTCTTGAATCTGAGTGGAATGCCAAGTTTGCTGAATATGAAAAGAAGTACAAGGAGGAAGCTGCAGTTTTGAAATCTATCATCACTGGCGATTTACCTGCTGGTTGGGAGAAAGCACTACCGACTTACACTCCAGAGATCCCTGCCGATGCAACCCGAAACCTATCGCAGCAAAACCTTAATGCCCTTGCGAATGTTCTTCCCGGTCTGATTGGTGGCAGTGCAGATCTTGCTTCTTCCAATATGACCTTGCTGAAAAAGTTTGGTGATTTCCAAAGTGATTCTCCAGCAGAGCGTAATGTTAGATTTGGTGTTAGAGAACATGGAATGGGAGCAATCTGCAACGGCATTGCTCTTCACAGCCGTGGACTTATTCCATACTGTGCAACCTTTTTTGTTTTCACCGACTACATGCGTGGTGCCATTAGGCTTTCCGCCCTATCCGAAGCCGGTGTTATATATGTCATGACTCACGATTCAATAGGACTTGGAGAGGATGGACCAACCCACCAGCCTATAGAGCACCTGGCAAGCTTCCGGGCAATGCCAAATATCTTGATGCTCCGTCCCGCTGACGGTAACGAAACAGCTGGAGCATACAAAGTTGCGGTGCTTAACAGGAAGAGACCCTCTATCCTTGCCCTTTCTAGACAAAAATTGCCTAACCTTGCCGGAACTTCTATTGAAGGAGTTGAAAAGGGTGGATACATCGTCTCTGACAACTCAACAGGAAACAAACCTGATGTCATTTTGATTGGAACTGGTTCCGAATTGGAAATTGCATACAAAGCTGGTGAGGATCTAAGAAAAGAAGGAAAGGCCGTTAGAGTTGTTTCCTTTGTTTCTTGGGAACTTTTTGATGAACAATCACAAGCTTACAAGGAAAGTGTTCTTCCTACTGCTGTTACGGCTAGGGTAAGCATTGAGGCTGGATCAACATTCGGGTGGGAGAAAATTATTGGAAGCAAAGGAAAAGCAATCGGCATTGATCGTTTTGGAGCTAGTGCTCCTGCAGGAACAATATACAAAGAGTTTGGCATCACTAAAGAAGCTGTTATTGCTGCAGCAAAAGAGCTTATTTAG
Protein sequence

>Msa0671400

MSSTSTSLSLTNPNLTRLTSSPSTTRLSSLPSTITLNRTHTPTTHLSQSHHLRHTAIHASVSAPPSTTTDSSLVEKSVNTIRFLAVDSVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPFWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVEDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNEIIDHYTYCILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTKIAFTESVEKRFEGLGWHVIWVKNGNTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGSALGAKEVDATRNNLGWPYEPFHVPEDVKKHWSRHIREGAALESEWNAKFAEYEKKYKEEAAVLKSIITGDLPAGWEKALPTYTPEIPADATRNLSQQNLNALANVLPGLIGGSADLASSNMTLLKKFGDFQSDSPAERNVRFGVREHGMGAICNGIALHSRGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIAYKAGEDLRKEGKAVRVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIIGSKGKAIGIDRFGASAPAGTIYKEFGITKEAVIAAAKELI*