AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005411


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005411.t1 MTR_1g085680 96.542 347 11 1 1 347 173 518 0.0 701
MS.gene005411.t1 MTR_7g006900 43.626 353 176 6 1 346 137 473 4.26e-99 301
MS.gene005411.t1 MTR_6g017325 42.045 352 181 5 1 345 172 507 9.15e-95 291
MS.gene005411.t1 MTR_2g072310 40.870 345 196 4 8 347 12 353 4.08e-93 282
MS.gene005411.t1 MTR_2g072380 41.449 345 194 4 8 347 12 353 1.27e-92 280
MS.gene005411.t1 MTR_4g113650 41.643 353 194 5 1 347 175 521 1.24e-91 284
MS.gene005411.t1 MTR_2g072380 41.449 345 194 4 8 347 152 493 1.75e-90 280
MS.gene005411.t1 MTR_2g072340 40.290 345 198 3 8 347 177 518 2.34e-90 280
MS.gene005411.t1 MTR_2g072400 42.587 317 176 2 32 343 199 514 1.71e-89 278
MS.gene005411.t1 MTR_2g072270 39.067 343 199 5 8 345 186 523 1.39e-84 265
MS.gene005411.t1 MTR_2g072250 40.346 347 193 4 8 346 175 515 2.93e-83 261
MS.gene005411.t1 MTR_5g095230 40.118 339 197 3 13 346 178 515 5.12e-83 261
MS.gene005411.t1 MTR_2g055430 40.729 329 189 3 23 346 192 519 3.94e-80 254
MS.gene005411.t1 MTR_7g098550 41.298 339 185 6 7 343 177 503 5.00e-80 253
MS.gene005411.t1 MTR_2g023680 36.182 351 215 5 1 346 173 519 5.04e-80 253
MS.gene005411.t1 MTR_1g101040 37.101 345 211 3 1 345 177 515 1.19e-79 252
MS.gene005411.t1 MTR_8g042020 39.017 346 195 6 8 345 186 523 6.15e-79 251
MS.gene005411.t1 MTR_2g055470 40.625 320 184 3 32 346 201 519 1.95e-78 249
MS.gene005411.t1 MTR_8g042060 39.564 321 187 3 30 345 170 488 2.14e-78 248
MS.gene005411.t1 MTR_3g093530 37.719 342 199 5 8 343 189 522 2.58e-78 249
MS.gene005411.t1 MTR_0147s0030 39.169 337 189 5 8 338 198 524 6.62e-78 248
MS.gene005411.t1 MTR_1g101050 36.232 345 214 3 1 345 173 511 1.58e-77 247
MS.gene005411.t1 MTR_8g042060 37.609 343 205 4 8 345 186 524 2.26e-77 246
MS.gene005411.t1 MTR_7g055793 37.982 337 193 5 8 338 136 462 4.84e-77 244
MS.gene005411.t1 MTR_2g072260 38.953 344 202 3 8 346 172 512 5.47e-77 245
MS.gene005411.t1 MTR_6g072490 35.817 349 212 3 1 346 175 514 1.70e-76 244
MS.gene005411.t1 MTR_7g055793 37.982 337 193 5 8 338 191 517 2.52e-76 244
MS.gene005411.t1 MTR_8g008530 36.471 340 200 5 8 340 184 514 4.28e-76 243
MS.gene005411.t1 MTR_4g031820 39.117 317 189 2 32 345 213 528 5.93e-76 243
MS.gene005411.t1 MTR_1g022040 36.957 322 191 5 26 345 192 503 9.21e-75 239
MS.gene005411.t1 MTR_0025s0110 36.311 347 213 4 1 345 186 526 1.56e-74 239
MS.gene005411.t1 MTR_7g098550 39.823 339 182 7 7 343 177 495 2.10e-73 236
MS.gene005411.t1 MTR_8g042000 38.484 343 202 5 8 345 186 524 2.13e-73 236
MS.gene005411.t1 MTR_8g469360 36.418 335 197 5 8 336 91 415 1.32e-69 224
MS.gene005411.t1 MTR_8g042040 35.860 343 194 6 8 345 186 507 1.18e-68 223
MS.gene005411.t1 MTR_4g031820 37.261 314 177 2 32 345 213 506 9.27e-67 218
MS.gene005411.t1 MTR_1g069200 35.632 348 213 6 1 345 173 512 4.49e-66 217
MS.gene005411.t1 MTR_2g061200 31.549 355 230 6 1 342 172 526 4.49e-64 212
MS.gene005411.t1 MTR_2g072420 52.448 143 68 0 205 347 1 143 2.69e-49 162
MS.gene005411.t1 MTR_7g006900 39.906 213 109 5 1 206 174 374 7.17e-43 152
MS.gene005411.t1 MTR_2g072330 40.909 176 73 1 172 347 161 305 5.78e-37 135
MS.gene005411.t1 MTR_2g072330 40.909 176 73 1 172 347 272 416 8.69e-36 134
MS.gene005411.t1 MTR_2g023680 31.308 214 138 5 1 209 173 382 4.24e-32 124
MS.gene005411.t1 MTR_3g062900 50.962 104 51 0 230 333 1 104 2.40e-31 115
MS.gene005411.t1 MTR_7g098550 38.000 200 114 5 7 204 177 368 5.97e-30 118
MS.gene005411.t1 MTR_2g055430 35.638 188 115 3 23 205 192 378 1.00e-29 117
MS.gene005411.t1 MTR_5g095230 33.000 200 128 3 13 207 178 376 3.29e-29 116
MS.gene005411.t1 MTR_8g042000 32.536 209 132 5 8 211 186 390 4.88e-29 115
MS.gene005411.t1 MTR_1g062190 25.672 335 217 9 25 338 209 532 1.72e-26 110
MS.gene005411.t1 MTR_5g009110 31.441 229 118 8 144 338 192 415 5.83e-26 107
MS.gene005411.t1 MTR_5g009110 31.441 229 118 8 144 338 340 563 1.57e-25 107
MS.gene005411.t1 MTR_7g079440 33.708 178 115 3 144 319 445 621 4.22e-24 103
MS.gene005411.t1 MTR_4g031820 30.387 181 122 2 32 209 213 392 1.61e-21 94.7
MS.gene005411.t1 MTR_3g104560 25.926 270 182 8 75 338 137 394 5.72e-21 93.6
MS.gene005411.t1 MTR_0727s0010 43.750 80 45 0 263 342 12 91 6.32e-21 86.7
MS.gene005411.t1 MTR_6g004600 27.049 244 164 6 109 342 273 512 7.07e-21 94.0
MS.gene005411.t1 MTR_3g104560 25.926 270 182 8 75 338 272 529 1.14e-20 93.2
MS.gene005411.t1 MTR_1g035830 28.279 244 152 8 113 340 266 502 1.53e-20 92.8
MS.gene005411.t1 MTR_3g079240 45.455 77 38 1 130 206 15 87 5.40e-20 84.3
MS.gene005411.t1 MTR_3g020780 24.925 333 215 11 14 321 160 482 8.43e-20 90.5
MS.gene005411.t1 MTR_6g004590 25.410 244 168 6 109 342 273 512 9.78e-20 90.5
MS.gene005411.t1 MTR_1g036130 25.292 257 180 6 92 340 249 501 1.09e-19 90.5
MS.gene005411.t1 MTR_1g035940 28.070 228 145 6 126 340 281 502 1.14e-19 90.1
MS.gene005411.t1 MTR_5g070010 27.178 287 173 9 89 347 232 510 1.18e-19 90.1
MS.gene005411.t1 MTR_1g037560 27.372 274 169 9 92 340 270 538 2.79e-19 89.4
MS.gene005411.t1 MTR_8g104100 26.203 187 134 2 155 340 65 248 3.75e-19 86.3
MS.gene005411.t1 MTR_4g075110 26.103 272 174 7 92 340 277 544 8.69e-19 87.8
MS.gene005411.t1 MTR_8g046240 24.848 330 219 12 36 347 188 506 1.03e-18 87.4
MS.gene005411.t1 MTR_1g035750 28.037 214 147 3 136 342 289 502 1.05e-18 87.4
MS.gene005411.t1 MTR_1g015860 24.031 258 181 8 90 338 270 521 1.18e-18 87.4
MS.gene005411.t1 MTR_1g035670 26.792 265 171 9 93 340 239 497 1.87e-18 86.7
MS.gene005411.t1 MTR_8g035820 27.843 255 163 9 105 344 260 508 2.10e-18 86.7
MS.gene005411.t1 MTR_8g076290 25.000 312 214 9 23 318 166 473 2.22e-18 86.3
MS.gene005411.t1 MTR_3g463060 26.336 262 180 7 93 347 249 504 2.80e-18 86.3
MS.gene005411.t1 MTR_7g033580 27.481 262 168 8 95 343 240 492 2.94e-18 85.9
MS.gene005411.t1 MTR_2g105360 28.159 277 179 9 74 344 235 497 3.50e-18 85.9
MS.gene005411.t1 MTR_7g075610 25.298 336 226 11 18 338 163 488 4.19e-18 85.5
MS.gene005411.t1 MTR_8g076940 29.710 276 148 12 61 318 211 458 4.22e-18 85.5
MS.gene005411.t1 MTR_5g094570 24.425 348 235 13 15 344 165 502 4.29e-18 85.5
MS.gene005411.t1 MTR_8g104030 23.932 234 172 2 91 318 15 248 4.55e-18 83.6
MS.gene005411.t1 MTR_7g033570 26.996 263 168 8 95 343 240 492 1.20e-17 84.3
MS.gene005411.t1 MTR_8g098435 24.148 352 234 9 19 347 166 507 1.55e-17 84.0
MS.gene005411.t1 MTR_0022s0290 24.719 356 220 11 2 318 138 484 1.80e-17 83.6
MS.gene005411.t1 MTR_5g073250 24.522 314 217 11 15 318 165 468 1.85e-17 83.6
MS.gene005411.t1 MTR_2g010330 27.273 231 149 7 98 318 257 478 2.06e-17 83.6
MS.gene005411.t1 MTR_8g063280 23.481 362 237 12 8 346 148 492 2.11e-17 83.6
MS.gene005411.t1 MTR_1g037550 26.354 277 172 9 92 340 270 542 2.21e-17 83.6
MS.gene005411.t1 MTR_8g089800 25.714 315 203 11 26 330 180 473 2.43e-17 83.2
MS.gene005411.t1 MTR_8g035810 27.273 253 161 10 109 344 263 509 2.51e-17 83.2
MS.gene005411.t1 MTR_7g088330 25.746 268 170 9 90 340 248 503 2.66e-17 83.2
MS.gene005411.t1 MTR_7g029275 30.952 210 137 4 145 347 303 511 3.47e-17 82.8
MS.gene005411.t1 MTR_8g046210 24.316 329 222 11 36 347 188 506 3.65e-17 82.8
MS.gene005411.t1 MTR_8g030590 27.170 265 163 9 96 340 251 505 4.05e-17 82.8
MS.gene005411.t1 MTR_1g035760 22.356 331 233 8 18 340 160 474 4.15e-17 82.4
MS.gene005411.t1 MTR_3g007320 24.762 315 203 9 7 316 152 437 4.18e-17 82.4
MS.gene005411.t1 MTR_2g031920 22.930 314 206 9 4 307 163 450 4.37e-17 82.4
MS.gene005411.t1 MTR_5g094520 23.529 340 238 10 19 344 94 425 5.21e-17 82.0
MS.gene005411.t1 MTR_2g010380 27.273 253 160 9 105 347 266 504 5.29e-17 82.4
MS.gene005411.t1 MTR_2g031930 23.432 303 203 9 5 302 168 446 7.90e-17 81.6
MS.gene005411.t1 MTR_8g035860 27.734 256 162 11 105 344 260 508 9.03e-17 81.6
MS.gene005411.t1 MTR_1g036010 26.786 224 153 5 126 340 281 502 9.18e-17 81.6
MS.gene005411.t1 MTR_2g031930 23.432 303 203 9 5 302 164 442 9.88e-17 81.3
MS.gene005411.t1 MTR_2g010320 26.482 253 163 7 88 325 236 480 1.04e-16 81.3
MS.gene005411.t1 MTR_4g104540 28.085 235 154 8 91 318 173 399 1.23e-16 80.9
MS.gene005411.t1 MTR_5g045250 27.727 220 147 6 101 316 275 486 1.28e-16 81.3
MS.gene005411.t1 MTR_4g012320 25.822 213 141 5 147 347 18 225 1.66e-16 77.8
MS.gene005411.t1 MTR_4g089055 23.988 321 230 10 10 321 170 485 1.66e-16 80.9
MS.gene005411.t1 MTR_5g094520 23.948 309 218 9 19 318 199 499 1.67e-16 80.9
MS.gene005411.t1 MTR_7g012860 25.000 312 203 9 23 316 168 466 1.70e-16 80.9
MS.gene005411.t1 MTR_0287s0060 25.000 312 203 9 23 316 168 466 1.70e-16 80.9
MS.gene005411.t1 MTR_1g035790 27.477 222 147 6 134 343 281 500 1.75e-16 80.9
MS.gene005411.t1 MTR_6g004670 25.847 236 152 9 121 342 276 502 1.88e-16 80.5
MS.gene005411.t1 MTR_4g071710 25.237 317 207 11 26 318 171 481 2.20e-16 80.5
MS.gene005411.t1 MTR_1g070365 28.409 176 118 3 145 314 298 471 2.33e-16 80.5
MS.gene005411.t1 MTR_7g096340 24.597 248 169 6 103 342 262 499 2.52e-16 80.1
MS.gene005411.t1 MTR_8g035780 26.207 290 173 13 89 344 227 509 2.58e-16 80.1
MS.gene005411.t1 MTR_8g035680 26.829 246 154 9 111 340 125 360 3.25e-16 79.3
MS.gene005411.t1 MTR_4g062500 25.000 328 215 10 15 318 160 480 3.37e-16 80.1
MS.gene005411.t1 MTR_2g010250 26.050 238 156 8 98 325 255 482 3.37e-16 79.7
MS.gene005411.t1 MTR_4g104570 32.353 170 108 5 153 318 2 168 3.38e-16 76.6
MS.gene005411.t1 MTR_1g036200 26.471 204 142 3 145 340 291 494 6.17e-16 79.0
MS.gene005411.t1 MTR_7g079440 35.714 126 80 1 144 269 445 569 6.98e-16 79.0
MS.gene005411.t1 MTR_4g104610 29.126 206 134 6 119 318 270 469 8.26e-16 78.6
MS.gene005411.t1 MTR_5g091760 26.909 275 179 7 75 344 219 476 9.84e-16 78.6
MS.gene005411.t1 MTR_7g103450 25.573 262 182 6 91 346 254 508 1.06e-15 78.6
MS.gene005411.t1 MTR_1g070345 28.409 176 118 3 145 314 298 471 1.19e-15 78.2
MS.gene005411.t1 MTR_5g095290 24.706 340 231 9 4 324 141 474 1.22e-15 78.2
MS.gene005411.t1 MTR_3g080580 24.556 338 180 10 25 314 176 486 1.23e-15 78.2
MS.gene005411.t1 MTR_1g102220 26.840 231 149 6 129 340 272 501 1.28e-15 78.2
MS.gene005411.t1 MTR_8g035680 26.562 256 160 10 103 340 262 507 1.33e-15 78.2
MS.gene005411.t1 MTR_8g036185 24.473 237 162 6 121 345 280 511 1.93e-15 77.8
MS.gene005411.t1 MTR_4g094772 24.430 307 212 10 14 316 160 450 2.02e-15 77.4
MS.gene005411.t1 MTR_8g035760 24.566 346 213 12 26 340 178 506 2.23e-15 77.4
MS.gene005411.t1 MTR_6g034940 23.714 350 228 13 6 345 161 481 2.28e-15 77.4
MS.gene005411.t1 MTR_4g089025 27.313 227 156 7 100 321 266 488 2.33e-15 77.4
MS.gene005411.t1 MTR_1g103670 22.936 327 223 9 36 344 181 496 2.57e-15 77.0
MS.gene005411.t1 MTR_5g092150 24.383 324 214 8 6 318 143 446 2.62e-15 77.0
MS.gene005411.t1 MTR_3g058060 21.967 305 230 6 21 318 169 472 3.43e-15 77.0
MS.gene005411.t1 MTR_4g048580 23.226 310 219 10 25 324 174 474 3.83e-15 76.6
MS.gene005411.t1 MTR_4g089020 26.582 237 163 8 91 321 232 463 4.24e-15 76.6
MS.gene005411.t1 MTR_3g058000 21.895 306 230 7 21 318 169 473 5.44e-15 76.3
MS.gene005411.t1 MTR_1g035800 26.471 204 142 3 145 340 304 507 6.33e-15 75.9
MS.gene005411.t1 MTR_0171s0010 25.397 252 170 7 86 321 232 481 6.36e-15 75.9
MS.gene005411.t1 MTR_4g119660 25.541 231 138 6 145 343 285 513 7.65e-15 75.9
MS.gene005411.t1 MTR_1g035580 27.751 209 139 5 136 340 291 491 7.90e-15 75.9
MS.gene005411.t1 MTR_3g058110 23.962 313 222 8 17 318 166 473 8.31e-15 75.9
MS.gene005411.t1 MTR_5g095260 25.000 308 221 7 22 324 173 475 9.06e-15 75.5
MS.gene005411.t1 MTR_5g094550 22.222 351 223 8 19 341 168 496 9.65e-15 75.5
MS.gene005411.t1 MTR_4g077210 31.361 169 110 5 151 316 303 468 1.24e-14 75.1
MS.gene005411.t1 MTR_3g057800 24.333 300 217 8 26 318 171 467 1.24e-14 75.1
MS.gene005411.t1 MTR_3g076530 23.054 334 238 10 25 344 174 502 1.49e-14 75.1
MS.gene005411.t1 MTR_8g088470 29.064 203 124 5 155 343 293 489 1.51e-14 74.7
MS.gene005411.t1 MTR_5g016440 25.333 300 203 10 26 316 169 456 1.55e-14 74.7
MS.gene005411.t1 MTR_6g004630 26.891 238 146 12 121 342 275 500 2.17e-14 74.3
MS.gene005411.t1 MTR_6g035115 26.129 310 207 10 26 324 173 471 2.28e-14 74.3
MS.gene005411.t1 MTR_5g018990 24.695 328 217 13 10 318 156 472 2.44e-14 74.3
MS.gene005411.t1 MTR_6g084770 24.127 315 211 10 24 321 172 475 3.08e-14 73.9
MS.gene005411.t1 MTR_1g069715 24.775 222 145 6 105 314 183 394 3.54e-14 73.9
MS.gene005411.t1 MTR_4g089030 23.197 319 219 10 19 321 179 487 3.98e-14 73.6
MS.gene005411.t1 MTR_5g072980 23.385 325 236 8 14 328 159 480 4.66e-14 73.6
MS.gene005411.t1 MTR_5g072930 23.385 325 236 8 14 328 159 480 4.66e-14 73.6
MS.gene005411.t1 MTR_3g058220 22.654 309 229 7 17 318 164 469 4.71e-14 73.6
MS.gene005411.t1 MTR_5g021390 23.794 311 217 10 26 321 178 483 5.03e-14 73.2
MS.gene005411.t1 MTR_4g104550 23.102 303 224 7 22 318 161 460 5.64e-14 73.2
MS.gene005411.t1 MTR_7g096320 25.500 200 139 5 151 342 303 500 6.29e-14 73.2
MS.gene005411.t1 MTR_0059s0170 23.284 335 236 8 4 318 137 470 7.64e-14 72.8
MS.gene005411.t1 MTR_1g091003 25.000 236 170 5 95 328 243 473 8.12e-14 72.8
MS.gene005411.t1 MTR_1g031700 22.126 348 240 10 18 347 163 497 8.48e-14 72.4
MS.gene005411.t1 MTR_2g073480 26.549 226 160 4 95 318 160 381 9.63e-14 72.0
MS.gene005411.t1 MTR_1g050362 27.869 183 114 5 145 314 299 476 9.69e-14 72.4
MS.gene005411.t1 MTR_4g094775 24.000 325 218 9 13 323 157 466 1.04e-13 72.4
MS.gene005411.t1 MTR_2g073440 26.549 226 160 4 95 318 227 448 1.08e-13 72.0
MS.gene005411.t1 MTR_5g007460 22.154 325 239 6 9 323 129 449 1.12e-13 72.0
MS.gene005411.t1 MTR_5g019140 25.108 231 139 6 145 343 300 528 1.15e-13 72.4
MS.gene005411.t1 MTR_4g104660 26.244 221 155 6 103 318 264 481 1.34e-13 72.0
MS.gene005411.t1 MTR_5g073320 23.077 312 224 10 15 318 166 469 1.57e-13 71.6
MS.gene005411.t1 MTR_1g036270 28.889 180 116 5 145 314 304 481 1.69e-13 71.6
MS.gene005411.t1 MTR_8g080520 26.840 231 154 8 91 316 275 495 1.86e-13 71.6
MS.gene005411.t1 MTR_1g091023 25.221 226 162 5 95 318 243 463 2.58e-13 71.2
MS.gene005411.t1 MTR_8g089190 24.719 267 182 7 81 340 185 439 2.74e-13 70.9
MS.gene005411.t1 MTR_8g020960 20.235 341 251 9 22 344 168 505 2.91e-13 70.9
MS.gene005411.t1 MTR_4g086130 23.699 346 218 14 5 339 152 462 2.97e-13 70.9
MS.gene005411.t1 MTR_6g453220 35.294 119 73 3 126 243 309 424 3.69e-13 70.5
MS.gene005411.t1 MTR_5g016410 29.518 166 109 4 153 316 300 459 3.98e-13 70.5
MS.gene005411.t1 MTR_3g058380 22.078 308 229 7 19 318 85 389 3.98e-13 70.5
MS.gene005411.t1 MTR_7g016040 22.684 313 207 10 9 316 154 436 4.76e-13 70.1
MS.gene005411.t1 MTR_1g091010 25.221 226 162 5 95 318 242 462 4.82e-13 70.1
MS.gene005411.t1 MTR_8g020950 20.882 340 249 8 22 344 169 505 7.34e-13 69.7
MS.gene005411.t1 MTR_2g073420 25.342 292 199 9 38 318 193 476 8.77e-13 69.3
MS.gene005411.t1 MTR_1g097220 22.295 305 213 11 28 316 201 497 9.00e-13 69.7
MS.gene005411.t1 MTR_4g054920 22.443 352 235 10 13 342 178 513 1.32e-12 68.9
MS.gene005411.t1 MTR_8g466180 22.540 315 228 8 15 318 160 469 1.42e-12 68.9
MS.gene005411.t1 MTR_8g020940 20.588 340 250 8 22 344 167 503 1.51e-12 68.9
MS.gene005411.t1 MTR_5g094540 22.258 310 222 10 19 318 168 468 1.59e-12 68.6
MS.gene005411.t1 MTR_5g009110 33.333 114 68 2 143 248 191 304 1.61e-12 67.8
MS.gene005411.t1 MTR_4g062510 27.586 174 116 5 152 318 314 484 1.83e-12 68.6
MS.gene005411.t1 MTR_3g436540 24.340 341 235 12 21 344 172 506 2.08e-12 68.6
MS.gene005411.t1 MTR_5g009110 31.707 123 76 2 144 258 340 462 2.29e-12 68.2
MS.gene005411.t1 MTR_7g027960 23.794 311 215 7 24 318 166 470 2.68e-12 68.2
MS.gene005411.t1 MTR_0638s0020 20.952 315 225 10 18 318 93 397 2.95e-12 67.8
MS.gene005411.t1 MTR_3g436390 20.767 313 229 11 18 318 165 470 3.06e-12 67.8
MS.gene005411.t1 MTR_5g070830 27.074 229 154 7 118 340 380 601 3.08e-12 68.2
MS.gene005411.t1 MTR_2g086040 22.712 295 201 7 55 340 217 493 3.17e-12 67.8
MS.gene005411.t1 MTR_8g012970 24.336 226 153 6 94 314 240 452 3.38e-12 67.8
MS.gene005411.t1 MTR_3g057970 23.948 309 218 10 17 318 161 459 4.43e-12 67.4
MS.gene005411.t1 MTR_2g437880 27.863 262 168 9 68 323 225 471 4.58e-12 67.4
MS.gene005411.t1 MTR_5g095220 23.837 344 227 10 4 324 113 444 5.07e-12 67.0
MS.gene005411.t1 MTR_4g086040 23.919 347 217 12 5 339 155 466 5.88e-12 67.0
MS.gene005411.t1 MTR_7g028020 23.151 311 217 7 24 318 166 470 6.10e-12 67.0
MS.gene005411.t1 MTR_5g073230 21.307 352 252 12 4 343 141 479 7.06e-12 66.6
MS.gene005411.t1 MTR_2g010300 26.201 229 139 7 105 325 260 466 7.12e-12 66.6
MS.gene005411.t1 MTR_2g010280 25.217 230 155 6 98 318 253 474 8.03e-12 66.6
MS.gene005411.t1 MTR_6g084900 27.027 185 126 6 158 338 73 252 1.10e-11 64.7
MS.gene005411.t1 MTR_8g076940 29.596 223 124 9 61 269 211 414 1.48e-11 65.5
MS.gene005411.t1 MTR_1g060550 23.675 283 177 11 89 344 241 511 1.68e-11 65.5
MS.gene005411.t1 MTR_5g070710 22.917 336 240 11 17 340 160 488 1.76e-11 65.5
MS.gene005411.t1 MTR_4g104640 25.573 262 181 9 94 347 259 514 1.77e-11 65.5
MS.gene005411.t1 MTR_4g088170 25.134 187 127 5 139 314 288 472 2.62e-11 65.1
MS.gene005411.t1 MTR_3g057900 24.359 312 216 11 17 318 164 465 3.23e-11 64.7
MS.gene005411.t1 MTR_5g034900 27.933 179 117 6 149 318 313 488 3.53e-11 64.7
MS.gene005411.t1 MTR_1750s0010 30.000 150 102 3 153 300 3 151 3.93e-11 61.2
MS.gene005411.t1 MTR_5g014240 22.540 315 220 8 6 314 159 455 4.14e-11 64.3
MS.gene005411.t1 MTR_5g073020 21.795 312 229 6 18 318 163 470 4.63e-11 64.3
MS.gene005411.t1 MTR_3g057860 24.074 324 231 11 26 340 172 489 4.63e-11 64.3
MS.gene005411.t1 MTR_1g035190 24.026 308 220 9 21 318 151 454 4.79e-11 64.3
MS.gene005411.t1 MTR_2g065360 21.884 329 229 12 9 321 127 443 7.84e-11 63.5
MS.gene005411.t1 MTR_6g042540 26.420 352 210 19 26 344 179 514 8.18e-11 63.5
MS.gene005411.t1 MTR_5g070850 23.282 262 179 9 91 340 240 491 9.77e-11 63.2
MS.gene005411.t1 MTR_0171s0020 23.810 252 179 7 79 323 236 481 9.96e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005411.t1 AT2G46960 55.429 350 147 6 1 346 58 402 1.89e-140 404
MS.gene005411.t1 AT2G46950 55.460 348 145 6 1 345 230 570 8.65e-139 406
MS.gene005411.t1 AT2G46960 55.429 350 147 6 1 346 174 518 3.02e-138 403
MS.gene005411.t1 AT4G27710 54.046 346 155 4 1 345 175 517 3.59e-135 395
MS.gene005411.t1 AT3G14660 42.604 338 191 3 8 345 32 366 4.15e-97 292
MS.gene005411.t1 AT2G26710 42.442 344 182 6 8 345 182 515 1.14e-95 294
MS.gene005411.t1 AT3G14660 42.274 343 194 4 3 345 174 512 2.43e-95 293
MS.gene005411.t1 AT3G14690 41.716 338 194 3 8 345 178 512 3.57e-92 285
MS.gene005411.t1 AT3G14690 41.716 338 194 3 8 345 213 547 1.15e-91 284
MS.gene005411.t1 AT3G14650 42.090 335 191 3 11 345 181 512 4.38e-91 282
MS.gene005411.t1 AT3G14640 40.533 338 200 1 8 345 178 514 1.24e-90 281
MS.gene005411.t1 AT3G14680 40.816 343 199 4 3 345 174 512 2.22e-90 280
MS.gene005411.t1 AT3G14640 40.533 338 200 1 8 345 200 536 3.44e-90 280
MS.gene005411.t1 AT3G14610 40.816 343 199 4 4 345 173 512 1.43e-88 275
MS.gene005411.t1 AT3G14620 40.351 342 195 7 3 342 178 512 4.34e-88 274
MS.gene005411.t1 AT3G14630 40.588 340 199 3 6 345 172 508 1.16e-87 273
MS.gene005411.t1 AT3G14630 40.588 340 199 3 6 345 227 563 4.87e-87 273
MS.gene005411.t1 AT5G38450 41.143 350 193 5 1 345 175 516 1.36e-80 255
MS.gene005411.t1 AT1G67110 44.237 321 165 4 32 347 201 512 2.55e-79 251
MS.gene005411.t1 AT1G75130 37.278 338 200 4 1 337 169 495 7.76e-77 245
MS.gene005411.t1 AT5G24910 38.081 344 196 6 8 340 190 527 2.35e-74 239
MS.gene005411.t1 AT5G24900 34.097 349 216 4 1 340 62 405 8.89e-74 234
MS.gene005411.t1 AT5G24900 34.097 349 216 4 1 340 179 522 3.17e-72 233
MS.gene005411.t1 AT5G52400 34.203 345 218 3 1 345 184 519 2.34e-67 220
MS.gene005411.t1 AT2G46950 50.718 209 93 6 1 206 230 431 4.96e-64 209
MS.gene005411.t1 AT4G27710 48.677 189 94 3 1 189 175 360 2.36e-56 188
MS.gene005411.t1 AT3G14660 37.255 204 124 4 3 206 174 373 1.13e-39 144
MS.gene005411.t1 AT5G38450 37.615 218 126 4 1 213 175 387 8.04e-29 115
MS.gene005411.t1 AT2G21910 26.686 341 209 8 41 342 165 503 1.60e-27 113
MS.gene005411.t1 AT3G53130 31.696 224 139 5 128 338 310 532 2.96e-27 112
MS.gene005411.t1 AT1G31800 33.889 180 114 5 144 320 366 543 2.21e-25 107
MS.gene005411.t1 AT1G34540 26.899 316 200 10 53 338 176 490 3.02e-25 106
MS.gene005411.t1 AT1G57750 30.303 264 164 7 92 342 237 493 3.93e-24 103
MS.gene005411.t1 AT1G67110 41.341 179 94 3 32 205 201 373 5.64e-24 101
MS.gene005411.t1 AT4G15110 29.412 204 114 6 144 318 348 550 3.29e-23 100
MS.gene005411.t1 AT2G23180 31.707 205 133 3 145 342 305 509 8.03e-23 99.8
MS.gene005411.t1 AT5G25900 30.325 277 174 9 74 344 243 506 4.58e-22 97.4
MS.gene005411.t1 AT3G48300 25.413 303 212 8 20 316 158 452 5.45e-22 97.1
MS.gene005411.t1 AT3G48300 25.413 303 212 8 20 316 160 454 5.50e-22 97.1
MS.gene005411.t1 AT4G39480 27.799 259 168 6 101 342 254 510 1.24e-21 96.3
MS.gene005411.t1 AT1G13140 22.414 348 215 10 48 342 176 521 1.27e-21 96.3
MS.gene005411.t1 AT4G39500 31.224 237 152 7 114 342 230 463 2.04e-21 95.1
MS.gene005411.t1 AT3G56630 28.458 253 158 10 103 343 255 496 2.67e-21 95.1
MS.gene005411.t1 AT2G26170 25.098 255 174 8 90 338 180 423 2.79e-21 94.7
MS.gene005411.t1 AT4G39500 31.224 237 152 7 114 342 280 513 3.33e-21 94.7
MS.gene005411.t1 AT1G13140 24.085 328 208 11 48 342 176 495 3.59e-21 94.7
MS.gene005411.t1 AT2G26170 25.098 255 174 8 90 338 263 506 3.72e-21 94.7
MS.gene005411.t1 AT1G01600 30.165 242 136 8 120 340 279 508 5.66e-21 94.4
MS.gene005411.t1 AT1G65340 30.275 218 146 4 127 342 287 500 7.02e-21 94.0
MS.gene005411.t1 AT3G26125 26.728 217 141 3 149 347 318 534 1.40e-20 93.2
MS.gene005411.t1 AT5G24910 30.631 222 137 6 8 218 190 405 2.13e-20 91.7
MS.gene005411.t1 AT5G58860 27.368 285 169 9 89 344 232 507 2.23e-20 92.4
MS.gene005411.t1 AT5G52320 30.317 221 142 6 127 342 286 499 3.38e-20 92.0
MS.gene005411.t1 AT4G13310 25.857 321 222 7 10 318 149 465 4.66e-20 91.3
MS.gene005411.t1 AT4G00360 29.231 260 153 9 100 338 255 504 4.81e-20 91.7
MS.gene005411.t1 AT5G52320 30.876 217 138 6 127 338 286 495 5.02e-20 91.3
MS.gene005411.t1 AT1G13150 24.324 259 180 5 103 347 263 519 8.28e-20 90.9
MS.gene005411.t1 AT4G39510 30.568 229 151 5 120 342 276 502 1.07e-19 90.5
MS.gene005411.t1 AT3G26230 25.223 337 232 8 25 347 162 492 1.34e-19 90.1
MS.gene005411.t1 AT5G02900 29.572 257 163 9 101 342 223 476 1.38e-19 90.1
MS.gene005411.t1 AT5G35715 25.538 325 211 11 14 318 91 404 1.65e-19 89.4
MS.gene005411.t1 AT3G48280 26.045 311 215 9 20 323 159 461 1.87e-19 89.7
MS.gene005411.t1 AT1G47620 30.088 226 153 3 120 340 285 510 4.13e-19 88.6
MS.gene005411.t1 AT3G48310 24.762 315 211 9 20 322 161 461 4.80e-19 88.6
MS.gene005411.t1 AT4G15350 24.074 324 226 8 9 318 156 473 6.10e-19 88.2
MS.gene005411.t1 AT1G63710 27.755 245 150 6 110 338 267 500 6.49e-19 88.2
MS.gene005411.t1 AT2G45970 27.311 238 147 7 120 340 277 505 1.50e-18 87.0
MS.gene005411.t1 AT3G48290 24.000 300 218 6 23 318 165 458 1.66e-18 86.7
MS.gene005411.t1 AT4G37340 26.821 302 195 10 26 316 171 457 1.94e-18 86.7
MS.gene005411.t1 AT5G36220 27.184 309 192 12 22 316 28 317 3.05e-18 85.1
MS.gene005411.t1 AT5G23190 24.185 368 214 11 16 340 190 535 3.91e-18 85.9
MS.gene005411.t1 AT5G09970 25.478 314 210 11 20 317 200 505 4.09e-18 85.9
MS.gene005411.t1 AT1G74110 27.350 234 143 8 93 316 291 507 6.10e-18 85.1
MS.gene005411.t1 AT3G48270 24.026 308 216 7 20 319 160 457 8.55e-18 84.7
MS.gene005411.t1 AT3G48290 30.357 168 115 2 153 318 317 484 9.08e-18 84.7
MS.gene005411.t1 AT5G36220 27.184 309 192 12 22 316 174 463 9.08e-18 84.7
MS.gene005411.t1 AT3G20950 23.602 322 229 8 9 318 167 483 9.39e-18 84.7
MS.gene005411.t1 AT1G24540 25.391 256 178 6 101 344 265 519 9.49e-18 84.7
MS.gene005411.t1 AT4G39490 27.459 244 157 6 117 342 272 513 1.13e-17 84.3
MS.gene005411.t1 AT4G13290 23.684 304 204 7 26 318 172 458 2.58e-17 83.2
MS.gene005411.t1 AT1G64930 27.184 206 137 5 117 316 279 477 4.29e-17 82.8
MS.gene005411.t1 AT1G64940 26.957 230 150 6 98 316 255 477 5.93e-17 82.4
MS.gene005411.t1 AT4G32170 27.354 223 154 5 125 342 281 500 7.73e-17 82.0
MS.gene005411.t1 AT5G08250 23.427 286 181 8 89 340 192 473 7.78e-17 81.6
MS.gene005411.t1 AT5G08250 23.427 286 181 8 89 340 254 535 7.91e-17 82.0
MS.gene005411.t1 AT1G28430 23.333 330 226 10 9 321 161 480 2.07e-16 80.5
MS.gene005411.t1 AT3G20140 22.500 320 231 8 9 318 163 475 2.23e-16 80.5
MS.gene005411.t1 AT3G26200 26.316 323 208 12 18 321 157 468 3.45e-16 79.7
MS.gene005411.t1 AT3G48520 28.365 208 137 5 145 343 293 497 3.98e-16 79.7
MS.gene005411.t1 AT1G50560 24.771 327 225 8 9 321 167 486 4.07e-16 79.7
MS.gene005411.t1 AT4G15360 22.796 329 240 8 3 321 155 479 4.21e-16 79.7
MS.gene005411.t1 AT3G20120 26.316 228 154 6 101 321 125 345 5.46e-16 78.6
MS.gene005411.t1 AT3G20120 26.316 228 154 6 101 321 125 345 5.46e-16 78.6
MS.gene005411.t1 AT3G20120 26.316 228 154 6 101 321 125 345 5.46e-16 78.6
MS.gene005411.t1 AT2G45510 25.000 272 178 6 95 344 240 507 5.69e-16 79.3
MS.gene005411.t1 AT3G20110 24.207 347 242 8 9 344 160 496 7.08e-16 79.0
MS.gene005411.t1 AT5G25180 24.633 341 224 13 24 347 164 488 8.82e-16 78.6
MS.gene005411.t1 AT5G44620 23.607 305 216 9 26 318 183 482 1.21e-15 78.2
MS.gene005411.t1 AT2G14100 23.494 332 221 11 9 321 164 481 1.27e-15 78.2
MS.gene005411.t1 AT2G27690 26.190 210 142 6 145 343 285 492 1.49e-15 77.8
MS.gene005411.t1 AT3G20120 26.316 228 154 6 101 321 261 481 1.72e-15 77.8
MS.gene005411.t1 AT3G20090 23.313 326 231 8 9 321 26 345 1.89e-15 77.0
MS.gene005411.t1 AT4G15330 21.277 329 232 8 9 321 131 448 2.64e-15 77.0
MS.gene005411.t1 AT3G20090 23.313 326 231 8 9 321 164 483 2.81e-15 77.0
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 140 370 3.27e-15 76.6
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 140 370 3.27e-15 76.6
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 140 370 3.27e-15 76.6
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 140 370 3.27e-15 76.6
MS.gene005411.t1 AT2G44890 24.514 257 174 7 103 344 256 507 3.69e-15 76.6
MS.gene005411.t1 AT4G15330 21.277 329 232 8 9 321 159 476 3.80e-15 76.6
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 277 507 5.78e-15 76.3
MS.gene005411.t1 AT3G20080 23.932 234 168 5 119 345 277 507 5.78e-15 76.3
MS.gene005411.t1 AT2G30770 26.032 315 213 11 17 318 157 464 8.89e-15 75.5
MS.gene005411.t1 AT5G24950 22.112 303 225 6 23 318 166 464 1.44e-14 75.1
MS.gene005411.t1 AT1G13080 24.432 352 237 13 14 347 156 496 1.44e-14 75.1
MS.gene005411.t1 AT3G26280 23.782 349 240 8 14 341 157 500 1.47e-14 75.1
MS.gene005411.t1 AT1G13080 24.432 352 237 13 14 347 38 378 1.49e-14 74.3
MS.gene005411.t1 AT3G20935 29.213 178 113 5 150 318 132 305 1.52e-14 74.3
MS.gene005411.t1 AT3G32047 21.846 325 234 7 9 321 163 479 1.64e-14 74.7
MS.gene005411.t1 AT3G26280 23.782 349 240 8 14 341 174 517 1.98e-14 74.7
MS.gene005411.t1 AT5G63450 27.734 256 162 8 99 343 257 500 2.72e-14 74.3
MS.gene005411.t1 AT2G42850 28.780 205 135 4 144 344 285 482 2.95e-14 73.9
MS.gene005411.t1 AT3G03470 22.364 313 228 6 18 316 166 477 3.42e-14 73.9
MS.gene005411.t1 AT1G05160 22.222 315 218 7 5 314 168 460 3.82e-14 73.6
MS.gene005411.t1 AT1G05160 22.222 315 218 7 5 314 168 460 3.82e-14 73.6
MS.gene005411.t1 AT5G63450 27.734 256 162 8 99 343 315 558 4.28e-14 73.6
MS.gene005411.t1 AT2G32440 21.519 316 229 6 3 314 157 457 4.41e-14 73.6
MS.gene005411.t1 AT2G32440 21.519 316 229 6 3 314 157 457 4.41e-14 73.6
MS.gene005411.t1 AT3G44250 26.332 319 197 12 22 318 163 465 4.45e-14 73.6
MS.gene005411.t1 AT3G53300 25.649 308 208 9 26 318 165 466 4.69e-14 73.6
MS.gene005411.t1 AT5G10610 24.850 334 228 8 23 344 167 489 5.59e-14 73.2
MS.gene005411.t1 AT5G06905 27.668 253 153 8 89 321 240 482 7.33e-14 72.8
MS.gene005411.t1 AT5G10600 28.696 230 131 8 93 316 273 475 7.34e-14 72.8
MS.gene005411.t1 AT5G61320 27.376 263 160 6 72 323 221 463 8.08e-14 72.8
MS.gene005411.t1 AT1G69500 25.316 237 128 7 145 342 294 520 9.50e-14 72.4
MS.gene005411.t1 AT1G64950 25.506 247 159 6 88 316 237 476 1.02e-13 72.4
MS.gene005411.t1 AT1G11610 25.980 204 145 4 121 320 265 466 1.23e-13 72.0
MS.gene005411.t1 AT3G61040 24.038 312 207 10 21 316 165 462 1.31e-13 72.0
MS.gene005411.t1 AT1G11610 25.980 204 145 4 121 320 265 466 1.31e-13 72.0
MS.gene005411.t1 AT5G24960 23.392 342 231 9 2 318 130 465 1.42e-13 72.0
MS.gene005411.t1 AT5G42580 23.242 327 228 9 22 338 173 486 1.94e-13 71.6
MS.gene005411.t1 AT4G19230 23.620 326 209 10 26 342 165 459 2.08e-13 71.2
MS.gene005411.t1 AT1G13710 27.234 235 153 7 110 338 283 505 2.53e-13 71.2
MS.gene005411.t1 AT3G48320 23.659 317 224 8 20 328 161 467 2.54e-13 71.2
MS.gene005411.t1 AT4G37410 25.413 303 207 13 23 316 166 458 2.99e-13 70.9
MS.gene005411.t1 AT4G37360 24.252 301 204 9 26 316 171 457 5.99e-13 70.1
MS.gene005411.t1 AT2G40890 22.154 325 198 10 22 317 164 462 7.90e-13 69.7
MS.gene005411.t1 AT5G47990 22.154 325 226 10 9 316 163 477 1.34e-12 68.9
MS.gene005411.t1 AT2G45570 21.283 343 246 10 18 340 168 506 1.45e-12 68.9
MS.gene005411.t1 AT5G57220 25.246 305 201 11 23 316 164 452 1.55e-12 68.9
MS.gene005411.t1 AT4G12330 24.409 254 171 9 78 319 238 482 1.80e-12 68.6
MS.gene005411.t1 AT4G31950 24.642 349 224 14 26 344 165 504 2.12e-12 68.6
MS.gene005411.t1 AT1G73340 25.877 228 149 8 94 317 243 454 2.39e-12 68.2
MS.gene005411.t1 AT3G50660 27.426 237 147 5 120 342 284 509 2.49e-12 68.2
MS.gene005411.t1 AT3G10560 24.686 239 163 6 91 320 254 484 2.52e-12 68.2
MS.gene005411.t1 AT4G15300 26.337 243 157 10 83 318 230 457 2.57e-12 68.2
MS.gene005411.t1 AT1G19630 28.261 230 135 7 94 314 232 440 3.50e-12 67.8
MS.gene005411.t1 AT2G23220 23.841 302 203 9 26 316 187 472 3.97e-12 67.4
MS.gene005411.t1 AT1G19630 28.261 230 135 7 94 314 232 440 4.49e-12 67.4
MS.gene005411.t1 AT4G37310 21.725 313 219 10 21 316 166 469 4.52e-12 67.4
MS.gene005411.t1 AT3G10570 25.275 182 129 5 144 320 305 484 6.05e-12 67.0
MS.gene005411.t1 AT2G45560 21.264 348 239 11 18 340 168 505 6.26e-12 67.0
MS.gene005411.t1 AT4G36220 23.364 321 218 10 23 321 171 485 6.80e-12 67.0
MS.gene005411.t1 AT2G12190 25.000 232 154 6 98 316 254 478 7.57e-12 66.6
MS.gene005411.t1 AT4G15300 30.857 175 108 7 151 318 267 435 8.03e-12 66.6
MS.gene005411.t1 AT4G15300 30.857 175 108 7 151 318 277 445 8.71e-12 66.6
MS.gene005411.t1 AT4G37430 23.256 301 210 7 26 316 172 461 9.15e-12 66.6
MS.gene005411.t1 AT4G20240 24.031 258 183 6 18 268 162 413 9.27e-12 66.2
MS.gene005411.t1 AT3G26320 22.936 327 224 10 10 318 149 465 1.27e-11 65.9
MS.gene005411.t1 AT3G30180 23.427 286 189 9 42 316 172 438 1.46e-11 65.9
MS.gene005411.t1 AT4G37400 21.359 309 222 8 19 316 160 458 1.71e-11 65.5
MS.gene005411.t1 AT3G28740 27.219 169 113 5 151 316 304 465 1.93e-11 65.5
MS.gene005411.t1 AT5G04630 24.803 254 168 9 80 320 237 480 2.29e-11 65.1
MS.gene005411.t1 AT1G11600 25.128 195 138 4 139 326 295 488 2.37e-11 65.1
MS.gene005411.t1 AT5G06900 21.587 315 232 9 10 314 152 461 2.47e-11 65.1
MS.gene005411.t1 AT5G38970 23.364 321 200 14 7 316 72 357 2.64e-11 64.7
MS.gene005411.t1 AT5G38970 23.364 321 200 14 7 316 72 357 2.64e-11 64.7
MS.gene005411.t1 AT5G38970 23.364 321 200 14 7 316 153 438 2.90e-11 64.7
MS.gene005411.t1 AT3G26310 24.116 311 221 8 18 318 159 464 3.77e-11 64.7
MS.gene005411.t1 AT2G42250 22.979 235 168 6 121 345 277 508 4.52e-11 64.3
MS.gene005411.t1 AT2G28850 24.042 287 193 11 23 300 172 442 4.72e-11 64.3
MS.gene005411.t1 AT3G30290 24.681 235 157 8 95 321 156 378 6.98e-11 63.5
MS.gene005411.t1 AT2G34490 28.105 153 103 4 152 300 297 446 7.01e-11 63.5
MS.gene005411.t1 AT3G53280 25.152 330 200 11 14 318 157 464 7.80e-11 63.5
MS.gene005411.t1 AT1G74550 27.041 196 132 7 155 346 286 474 8.79e-11 63.5

Find 59 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACTTCAAACTTACTTAAT+TGG 0.112864 1.1:-63421660 MS.gene005411:CDS
TCTGAATCAGATTGCTCTTA+TGG 0.220467 1.1:-63421802 MS.gene005411:CDS
TTCTGACCAATACAATTTCT+TGG 0.227026 1.1:+63420752 None:intergenic
GGCTTCACAAGACATGAAAT+TGG 0.317874 1.1:-63420945 MS.gene005411:CDS
CTTGTGTGAATCATTGTTAT+TGG 0.337793 1.1:+63420884 None:intergenic
GAAAATGCAAGTAGAGCATT+TGG 0.343336 1.1:+63420782 None:intergenic
TTGTGTGAATCATTGTTATT+GGG 0.356064 1.1:+63420885 None:intergenic
TTCATGACCAGCAAAGAAAA+AGG 0.369544 1.1:+63421684 None:intergenic
CTGCAATGGTTTAATAATGA+TGG 0.370283 1.1:+63420604 None:intergenic
AATCCAATGAGATTCATAAA+TGG 0.372514 1.1:-63420827 MS.gene005411:CDS
TTGAGATATGGAGGCTTGAT+AGG 0.372626 1.1:-63421876 MS.gene005411:CDS
ATTCATAAATGGAATATCTA+AGG 0.372905 1.1:-63420816 MS.gene005411:CDS
ACTCTTTCTAGTTGTATTGC+AGG 0.374691 1.1:+63420968 None:intergenic
ATTCCATTTATGAATCTCAT+TGG 0.376067 1.1:+63420824 None:intergenic
ATAATTGCCCACACTGCCTT+TGG 0.390186 1.1:-63422135 MS.gene005411:CDS
TGGTGTTGCTGGAAGCATTA+AGG 0.391043 1.1:-63421000 MS.gene005411:CDS
TTTGGTACCAGCTTTGTTCA+TGG 0.396834 1.1:-63422117 MS.gene005411:CDS
ACAGGTGCATGTTTATAGTC+AGG 0.411401 1.1:+63420662 None:intergenic
CTAAGTCAAATATTGAGATA+TGG 0.411871 1.1:-63421888 MS.gene005411:CDS
TAAGGTGAATATGGTGTTGC+TGG 0.415343 1.1:-63421011 MS.gene005411:intron
CCACTCATCTAGCATAGAAA+TGG 0.430775 1.1:+63422236 None:intergenic
TGTTGAGTTTGCACAAGGAT+TGG 0.449298 1.1:-63421627 MS.gene005411:CDS
TGCAAAGTGAGGTTGTTAAC+AGG 0.452402 1.1:+63420644 None:intergenic
TAGAGCATTTGGGTGATTTG+AGG 0.483999 1.1:+63420793 None:intergenic
TTTGATAGCATATCTGCATC+AGG 0.485478 1.1:+63421556 None:intergenic
CAAGAGGTCCAACAGATTTG+TGG 0.486255 1.1:-63421589 MS.gene005411:CDS
TGATCTACTAGGAGTAATGA+TGG 0.488965 1.1:-63421776 MS.gene005411:CDS
GTTGAAGATGAATGAAATCA+TGG 0.495484 1.1:-63421719 MS.gene005411:CDS
GCTTCACAAGACATGAAATT+GGG 0.499522 1.1:-63420944 MS.gene005411:CDS
GTGGGTCCAAGAAATTGTAT+TGG 0.500387 1.1:-63420758 MS.gene005411:CDS
ATCTCAATATTTGACTTAGT+AGG 0.504556 1.1:+63421892 None:intergenic
TGCAATGGTTTAATAATGAT+GGG 0.509688 1.1:+63420605 None:intergenic
TTTCCATGCCACAAATCTGT+TGG 0.511348 1.1:+63421581 None:intergenic
CAGGTGCATGTTTATAGTCA+GGG 0.517757 1.1:+63420663 None:intergenic
TTCTCTTCCATGAACAAAGC+TGG 0.527616 1.1:+63422110 None:intergenic
TGATTAATATACTGAGTGCC+AGG 0.539539 1.1:+63422024 None:intergenic
CCAATTAAGTAAGTTTGAAG+TGG 0.543689 1.1:+63421660 None:intergenic
AAAATGCAAGTAGAGCATTT+GGG 0.544504 1.1:+63420783 None:intergenic
TCTTATGGAGATGATCTACT+AGG 0.545826 1.1:-63421787 MS.gene005411:CDS
TGATGACTTTGATTCTTCAA+AGG 0.546833 1.1:-63420703 MS.gene005411:CDS
ACTAAGAATTATAACTGCAA+TGG 0.550538 1.1:+63420590 None:intergenic
AAAGCAAGCTATTGAAACAA+AGG 0.561598 1.1:-63422211 MS.gene005411:CDS
GCTGGTACCAAAGGCAGTGT+GGG 0.576051 1.1:+63422128 None:intergenic
ATGAACAAAGCTGGTACCAA+AGG 0.578993 1.1:+63422119 None:intergenic
GGTCCAACAGATTTGTGGCA+TGG 0.581937 1.1:-63421584 MS.gene005411:CDS
ATGGTTTAATAATGATGGGA+AGG 0.595985 1.1:+63420609 None:intergenic
CGTGTTGTGGTTGCAAAGTG+AGG 0.598566 1.1:+63420633 None:intergenic
TGCAATACAACTAGAAAGAG+TGG 0.600070 1.1:-63420966 MS.gene005411:CDS
AGCTGGTACCAAAGGCAGTG+TGG 0.603329 1.1:+63422127 None:intergenic
AGTCAAATATTGAGATATGG+AGG 0.615912 1.1:-63421885 MS.gene005411:CDS
CCATTTCTATGCTAGATGAG+TGG 0.620403 1.1:-63422236 MS.gene005411:CDS
GCAAGACAAACTTAGACAAG+AGG 0.634781 1.1:-63421605 MS.gene005411:CDS
AGGTGCATGTTTATAGTCAG+GGG 0.653071 1.1:+63420664 None:intergenic
TTGTGAGACATGTTCCTCGA+GGG 0.654949 1.1:+63420909 None:intergenic
CTCACTTTGCAACCACAACA+CGG 0.654998 1.1:-63420632 MS.gene005411:CDS
GGAAATTTGATGATCCCTCG+AGG 0.691698 1.1:-63420923 MS.gene005411:CDS
ATGATGGGAAGGCCGTGTTG+TGG 0.693276 1.1:+63420620 None:intergenic
ATTGTGAGACATGTTCCTCG+AGG 0.703218 1.1:+63420908 None:intergenic
AGTGCCAGGAATGAAAACGT+CGG 0.734237 1.1:+63422038 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAAATGGAATATCTA+AGG - chr1.1:63422031-63422050 MS.gene005411:intron 20.0%
!! CAATAAATATAGAGAATGAA+TGG + chr1.1:63421603-63421622 None:intergenic 20.0%
!! CAATTAAACAATAGAACAAT+TGG - chr1.1:63421430-63421449 MS.gene005411:intron 20.0%
!! TATGCTATCAAAGTTAAAAA+TGG - chr1.1:63421302-63421321 MS.gene005411:intron 20.0%
!! TCACACAAGTAAAAAATATT+GGG - chr1.1:63421977-63421996 MS.gene005411:intron 20.0%
!! TTCACACAAGTAAAAAATAT+TGG - chr1.1:63421976-63421995 MS.gene005411:intron 20.0%
!!! ATTCTTAGTTTTTCAGATTT+AGG - chr1.1:63421347-63421366 MS.gene005411:intron 20.0%
!!! CTTTAGATCATTCTAAAAAT+CGG - chr1.1:63421722-63421741 MS.gene005411:CDS 20.0%
! AATCCAATGAGATTCATAAA+TGG - chr1.1:63422020-63422039 MS.gene005411:intron 25.0%
! ACAGAAAAAACAAATGATCA+TGG - chr1.1:63421096-63421115 MS.gene005411:intron 25.0%
! ATCTGAAAAACTAAGAATGA+AGG + chr1.1:63421345-63421364 None:intergenic 25.0%
! ATTCCATTTATGAATCTCAT+TGG + chr1.1:63422026-63422045 None:intergenic 25.0%
! CACACAAGTAAAAAATATTG+GGG - chr1.1:63421978-63421997 MS.gene005411:intron 25.0%
! CGAATAAAACTAACTTACAA+TGG - chr1.1:63421756-63421775 MS.gene005411:CDS 25.0%
! CTAAGTCAAATATTGAGATA+TGG - chr1.1:63420959-63420978 MS.gene005411:CDS 25.0%
! TGCAATGGTTTAATAATGAT+GGG + chr1.1:63422245-63422264 None:intergenic 25.0%
!! ATCTCAATATTTGACTTAGT+AGG + chr1.1:63420958-63420977 None:intergenic 25.0%
!! TAACTTGTATAAGTAGAGAA+TGG + chr1.1:63421633-63421652 None:intergenic 25.0%
!! TCATTCATCTTCAACTTTTT+AGG + chr1.1:63421123-63421142 None:intergenic 25.0%
!! TTGTGTGAATCATTGTTATT+GGG + chr1.1:63421965-63421984 None:intergenic 25.0%
!!! ACAATGTGTCTCATTTTTTA+AGG - chr1.1:63421818-63421837 MS.gene005411:CDS 25.0%
!!! CTCATTTTTTAAGGTGAATA+TGG - chr1.1:63421827-63421846 MS.gene005411:CDS 25.0%
AAAGCAAGCTATTGAAACAA+AGG - chr1.1:63420636-63420655 MS.gene005411:CDS 30.0%
AGTCAAATATTGAGATATGG+AGG - chr1.1:63420962-63420981 MS.gene005411:CDS 30.0%
CCAATTAAGTAAGTTTGAAG+TGG + chr1.1:63421190-63421209 None:intergenic 30.0%
CCACTTCAAACTTACTTAAT+TGG - chr1.1:63421187-63421206 MS.gene005411:intron 30.0%
CTGCAATGGTTTAATAATGA+TGG + chr1.1:63422246-63422265 None:intergenic 30.0%
CTTGCTTACTATAGATTCAT+TGG - chr1.1:63420852-63420871 MS.gene005411:CDS 30.0%
CTTGTGTGAATCATTGTTAT+TGG + chr1.1:63421966-63421985 None:intergenic 30.0%
GTTGAAGATGAATGAAATCA+TGG - chr1.1:63421128-63421147 MS.gene005411:intron 30.0%
TGATGACTTTGATTCTTCAA+AGG - chr1.1:63422144-63422163 MS.gene005411:CDS 30.0%
TTCTGACCAATACAATTTCT+TGG + chr1.1:63422098-63422117 None:intergenic 30.0%
! AAAATGCAAGTAGAGCATTT+GGG + chr1.1:63422067-63422086 None:intergenic 30.0%
! ATGGTTTAATAATGATGGGA+AGG + chr1.1:63422241-63422260 None:intergenic 30.0%
! CACCAAAAGTGTATTAAACA+GGG + chr1.1:63421507-63421526 None:intergenic 30.0%
! TGATTCTTCAAAGGTTTTCT+TGG - chr1.1:63422153-63422172 MS.gene005411:CDS 30.0%
!! ATTGCTATTTAACCGACTTA+GGG - chr1.1:63421378-63421397 MS.gene005411:intron 30.0%
AAGTGTATTAAACAGGGACA+CGG + chr1.1:63421501-63421520 None:intergenic 35.0%
ATATAGAGAATGAATGGCGA+AGG + chr1.1:63421597-63421616 None:intergenic 35.0%
GCTTCACAAGACATGAAATT+GGG - chr1.1:63421903-63421922 MS.gene005411:intron 35.0%
GTGCAAACTCAACAAAAAGA+CGG + chr1.1:63421214-63421233 None:intergenic 35.0%
TCTGAATCAGATTGCTCTTA+TGG - chr1.1:63421045-63421064 MS.gene005411:intron 35.0%
TCTTATGGAGATGATCTACT+AGG - chr1.1:63421060-63421079 MS.gene005411:intron 35.0%
TGATCTACTAGGAGTAATGA+TGG - chr1.1:63421071-63421090 MS.gene005411:intron 35.0%
TGATTAATATACTGAGTGCC+AGG + chr1.1:63420826-63420845 None:intergenic 35.0%
TGCAATACAACTAGAAAGAG+TGG - chr1.1:63421881-63421900 MS.gene005411:CDS 35.0%
TTCATGACCAGCAAAGAAAA+AGG + chr1.1:63421166-63421185 None:intergenic 35.0%
! CCACCAAAAGTGTATTAAAC+AGG + chr1.1:63421508-63421527 None:intergenic 35.0%
! CCTGTTTAATACACTTTTGG+TGG - chr1.1:63421505-63421524 MS.gene005411:intron 35.0%
! CTTTTTGTTGAGTTTGCACA+AGG - chr1.1:63421215-63421234 MS.gene005411:intron 35.0%
! GAAAATGCAAGTAGAGCATT+TGG + chr1.1:63422068-63422087 None:intergenic 35.0%
! GTCCCTGTTTAATACACTTT+TGG - chr1.1:63421502-63421521 MS.gene005411:intron 35.0%
! TTTGATAGCATATCTGCATC+AGG + chr1.1:63421294-63421313 None:intergenic 35.0%
!! ACTCTTTCTAGTTGTATTGC+AGG + chr1.1:63421882-63421901 None:intergenic 35.0%
!! CATTGCTATTTAACCGACTT+AGG - chr1.1:63421377-63421396 MS.gene005411:intron 35.0%
!! TGGTCAGAATTTTGCTATGT+TGG - chr1.1:63422109-63422128 MS.gene005411:CDS 35.0%
ACAGGTGCATGTTTATAGTC+AGG + chr1.1:63422188-63422207 None:intergenic 40.0%
AGAACAATTGGAATTCCCCT+TGG - chr1.1:63421442-63421461 MS.gene005411:intron 40.0%
AGAGAGAAAATGACGATGCT+AGG - chr1.1:63421559-63421578 MS.gene005411:CDS 40.0%
AGGTGCATGTTTATAGTCAG+GGG + chr1.1:63422186-63422205 None:intergenic 40.0%
ATGAACAAAGCTGGTACCAA+AGG + chr1.1:63420731-63420750 None:intergenic 40.0%
CAGGTGCATGTTTATAGTCA+GGG + chr1.1:63422187-63422206 None:intergenic 40.0%
CCACTCATCTAGCATAGAAA+TGG + chr1.1:63420614-63420633 None:intergenic 40.0%
CCATTTCTATGCTAGATGAG+TGG - chr1.1:63420611-63420630 MS.gene005411:CDS 40.0%
GCAAGACAAACTTAGACAAG+AGG - chr1.1:63421242-63421261 MS.gene005411:intron 40.0%
GGCTTCACAAGACATGAAAT+TGG - chr1.1:63421902-63421921 MS.gene005411:CDS 40.0%
GTGGGTCCAAGAAATTGTAT+TGG - chr1.1:63422089-63422108 MS.gene005411:CDS 40.0%
TAATTGCACACACTTTCCAC+AGG + chr1.1:63421416-63421435 None:intergenic 40.0%
TCTCTCCAGTGAAAATCTCA+CGG - chr1.1:63421467-63421486 MS.gene005411:intron 40.0%
TGCAAAGTGAGGTTGTTAAC+AGG + chr1.1:63422206-63422225 None:intergenic 40.0%
TGTTGAGTTTGCACAAGGAT+TGG - chr1.1:63421220-63421239 MS.gene005411:intron 40.0%
TTCTCTTCCATGAACAAAGC+TGG + chr1.1:63420740-63420759 None:intergenic 40.0%
TTGAGATATGGAGGCTTGAT+AGG - chr1.1:63420971-63420990 MS.gene005411:CDS 40.0%
TTTCCATGCCACAAATCTGT+TGG + chr1.1:63421269-63421288 None:intergenic 40.0%
! AATTCCGACGTTTTCATTCC+TGG - chr1.1:63420805-63420824 MS.gene005411:CDS 40.0%
! GCTCTACTTGCATTTTCTGT+GGG - chr1.1:63422071-63422090 MS.gene005411:CDS 40.0%
! TAGAGCATTTGGGTGATTTG+AGG + chr1.1:63422057-63422076 None:intergenic 40.0%
! TGCAAGACCTTTTTCTTTGC+TGG - chr1.1:63421156-63421175 MS.gene005411:intron 40.0%
! TGCTCTACTTGCATTTTCTG+TGG - chr1.1:63422070-63422089 MS.gene005411:CDS 40.0%
!! TAAGGTGAATATGGTGTTGC+TGG - chr1.1:63421836-63421855 MS.gene005411:CDS 40.0%
!! TTTGGTACCAGCTTTGTTCA+TGG - chr1.1:63420730-63420749 MS.gene005411:CDS 40.0%
AGTGCCAGGAATGAAAACGT+CGG + chr1.1:63420812-63420831 None:intergenic 45.0%
ATAATTGCCCACACTGCCTT+TGG - chr1.1:63420712-63420731 MS.gene005411:CDS 45.0%
ATTGTGAGACATGTTCCTCG+AGG + chr1.1:63421942-63421961 None:intergenic 45.0%
CAAGAGGTCCAACAGATTTG+TGG - chr1.1:63421258-63421277 MS.gene005411:intron 45.0%
CTCACTTTGCAACCACAACA+CGG - chr1.1:63422215-63422234 MS.gene005411:CDS 45.0%
CTCTCCAGTGAAAATCTCAC+GGG - chr1.1:63421468-63421487 MS.gene005411:intron 45.0%
TTGTGAGACATGTTCCTCGA+GGG + chr1.1:63421941-63421960 None:intergenic 45.0%
TTTCACTGGAGAGAGTCCAA+GGG + chr1.1:63421461-63421480 None:intergenic 45.0%
! GGAAATTTGATGATCCCTCG+AGG - chr1.1:63421924-63421943 MS.gene005411:intron 45.0%
! TTTTCACTGGAGAGAGTCCA+AGG + chr1.1:63421462-63421481 None:intergenic 45.0%
!! TGGTGTTGCTGGAAGCATTA+AGG - chr1.1:63421847-63421866 MS.gene005411:CDS 45.0%
!!! TTTTTTTATTTTTAATGTTT+TGG - chr1.1:63420909-63420928 MS.gene005411:CDS 5.0%
AGAGGATCTGCTCCCTAAGT+CGG + chr1.1:63421393-63421412 None:intergenic 50.0%
CAGTGAAAATCTCACGGGAG+AGG - chr1.1:63421473-63421492 MS.gene005411:intron 50.0%
CGTGTTGTGGTTGCAAAGTG+AGG + chr1.1:63422217-63422236 None:intergenic 50.0%
GGTCCAACAGATTTGTGGCA+TGG - chr1.1:63421263-63421282 MS.gene005411:intron 50.0%
TTCACTGGAGAGAGTCCAAG+GGG + chr1.1:63421460-63421479 None:intergenic 50.0%
! CTCTCCCGTGAGATTTTCAC+TGG + chr1.1:63421475-63421494 None:intergenic 50.0%
AGCTGGTACCAAAGGCAGTG+TGG + chr1.1:63420723-63420742 None:intergenic 55.0%
GCACACACTTTCCACAGGAG+AGG + chr1.1:63421411-63421430 None:intergenic 55.0%
GCTGGTACCAAAGGCAGTGT+GGG + chr1.1:63420722-63420741 None:intergenic 55.0%
! ATGATGGGAAGGCCGTGTTG+TGG + chr1.1:63422230-63422249 None:intergenic 55.0%
AGGGAGCAGATCCTCTCCTG+TGG - chr1.1:63421397-63421416 MS.gene005411:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63420598 63422271 63420598 ID=MS.gene005411
chr1.1 mRNA 63420598 63422271 63420598 ID=MS.gene005411.t1;Parent=MS.gene005411
chr1.1 exon 63422036 63422271 63422036 ID=MS.gene005411.t1.exon1;Parent=MS.gene005411.t1
chr1.1 CDS 63422036 63422271 63422036 ID=cds.MS.gene005411.t1;Parent=MS.gene005411.t1
chr1.1 exon 63421546 63421921 63421546 ID=MS.gene005411.t1.exon2;Parent=MS.gene005411.t1
chr1.1 CDS 63421546 63421921 63421546 ID=cds.MS.gene005411.t1;Parent=MS.gene005411.t1
chr1.1 exon 63420598 63421029 63420598 ID=MS.gene005411.t1.exon3;Parent=MS.gene005411.t1
chr1.1 CDS 63420598 63421029 63420598 ID=cds.MS.gene005411.t1;Parent=MS.gene005411.t1
Gene Sequence

>MS.gene005411

ATGGCAGCATGTACCATTTCTATGCTAGATGAGTGGAAAAAGCAAGCTATTGAAACAAAGGAGAAATCAAAGACAATAGAGATGACTGAAGAATTGCGAGAGCTAACAGCAAATATAATTGCCCACACTGCCTTTGGTACCAGCTTTGTTCATGGAAGAGAAGCTTTTGATGCACAAACACAGCTTCATAAGCATTGCGTAGCTTCAAATTCCGACGTTTTCATTCCTGGCACTCAGTATATTAATCAACTTCTCTTGCTTACTATAGATTCATTGGTTCTGCATAGATCAGTACATAAATAATTTTTTATTTTTTTTATTTTTAATGTTTTGGATTCTTAATGCTGCAGATATTTTCCTACTAAGTCAAATATTGAGATATGGAGGCTTGATAGGAAAATGAAGAAATCACTACAATGCATTATAGAAAGTAGATTGAAATTGAATTCTGAATCAGATTGCTCTTATGGAGATGATCTACTAGGAGTAATGATGGATACAGAAAAAACAAATGATCATGGTCCTAAAAAGTTGAAGATGAATGAAATCATGGATGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTTACTTAATTGGACCGTCTTTTTGTTGAGTTTGCACAAGGATTGGCAAGACAAACTTAGACAAGAGGTCCAACAGATTTGTGGCATGGAAATTCCTGATGCAGATATGCTATCAAAGTTAAAAATGGTAATATTAACTCGAAAACCTTCATTCTTAGTTTTTCAGATTTAGGTCTAGAGCATTGCTATTTAACCGACTTAGGGAGCAGATCCTCTCCTGTGGAAAGTGTGTGCAATTAAACAATAGAACAATTGGAATTCCCCTTGGACTCTCTCCAGTGAAAATCTCACGGGAGAGGATCCGTGTCCCTGTTTAATACACTTTTGGTGGTACAATATAGTCGTAGAGAAATGACAATAAAAGAGAGAAAATGACGATGCTAGGCTACTAAACTAACCTTCGCCATTCATTCTCTATATTTATTGCATTCATCCATTCTCTACTTATACAAGTTAAGCATAACAAAAATTAACATATTCACGACACTCTATTAAACTAGCAAATAACTCGTCATAATGAGATCTCTTTAGATCATTCTAAAAATCGGTGACTCATAATCGAATAAAACTAACTTACAATGGTTTAAGTCTAACATCTTTACAAAATTAATTTAACAAGTTACAATGTGTCTCATTTTTTAAGGTGAATATGGTGTTGCTGGAAGCATTAAGGTTGTACTGTCCTGCAATACAACTAGAAAGAGTGGCTTCACAAGACATGAAATTGGGAAATTTGATGATCCCTCGAGGAACATGTCTCACAATCCCAATAACAATGATTCACACAAGTAAAAAATATTGGGGTGAAGATGCAAATGAGTTCAATCCAATGAGATTCATAAATGGAATATCTAAGGCCTCAAATCACCCAAATGCTCTACTTGCATTTTCTGTGGGTCCAAGAAATTGTATTGGTCAGAATTTTGCTATGTTGGAAGCTAAGACAGTGATGACTTTGATTCTTCAAAGGTTTTCTTGGTCTCTTTCCCCTGACTATAAACATGCACCTGTTAACAACCTCACTTTGCAACCACAACACGGCCTTCCCATCATTATTAAACCATTGCAGTTATAA

Protein sequence

>MS.gene005411.t1

MAACTISMLDEWKKQAIETKEKSKTIEMTEELRELTANIIAHTAFGTSFVHGREAFDAQTQLHKHCVASNSDVFIPGTQYFPTKSNIEIWRLDRKMKKSLQCIIESRLKLNSESDCSYGDDLLGVMMDTEKTNDHGPKKLKMNEIMDECKTFFFAGHETTSNLLNWTVFLLSLHKDWQDKLRQEVQQICGMEIPDADMLSKLKMVNMVLLEALRLYCPAIQLERVASQDMKLGNLMIPRGTCLTIPITMIHTSKKYWGEDANEFNPMRFINGISKASNHPNALLAFSVGPRNCIGQNFAMLEAKTVMTLILQRFSWSLSPDYKHAPVNNLTLQPQHGLPIIIKPLQL