Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016326.t1 | XP_003628200.1 | 84.1 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 1.60E-73 | 285.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016326.t1 | Q941R6 | 33.3 | 150 | 97 | 3 | 3 | 150 | 20 | 168 | 2.8e-18 | 93.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016326.t1 | G7L7T5 | 84.1 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 1.1e-73 | 285.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016326.t1 | MTR_8g045490 | 84.076 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 2.77e-96 | 275 |
| MS.gene016326.t1 | MTR_8g045400 | 79.618 | 157 | 31 | 1 | 1 | 157 | 1 | 156 | 8.16e-90 | 258 |
| MS.gene016326.t1 | MTR_8g045520 | 76.433 | 157 | 37 | 0 | 1 | 157 | 1 | 157 | 1.07e-88 | 256 |
| MS.gene016326.t1 | MTR_8g045695 | 70.064 | 157 | 46 | 1 | 1 | 157 | 1 | 156 | 5.80e-81 | 236 |
| MS.gene016326.t1 | MTR_8g045570 | 71.053 | 152 | 44 | 0 | 1 | 152 | 1 | 152 | 1.26e-80 | 235 |
| MS.gene016326.t1 | MTR_8g045555 | 71.053 | 152 | 44 | 0 | 1 | 152 | 1 | 152 | 2.38e-78 | 229 |
| MS.gene016326.t1 | MTR_8g045300 | 67.949 | 156 | 50 | 0 | 1 | 156 | 1 | 156 | 2.57e-78 | 229 |
| MS.gene016326.t1 | MTR_8g045735 | 67.742 | 155 | 49 | 1 | 1 | 155 | 1 | 154 | 1.69e-77 | 227 |
| MS.gene016326.t1 | MTR_8g045665 | 68.153 | 157 | 49 | 1 | 1 | 157 | 1 | 156 | 6.24e-77 | 226 |
| MS.gene016326.t1 | MTR_8g045640 | 67.516 | 157 | 50 | 1 | 1 | 157 | 1 | 156 | 3.09e-75 | 221 |
| MS.gene016326.t1 | MTR_8g045560 | 65.605 | 157 | 53 | 1 | 1 | 157 | 1 | 156 | 4.56e-73 | 216 |
| MS.gene016326.t1 | MTR_1g030810 | 43.791 | 153 | 83 | 2 | 1 | 151 | 1 | 152 | 1.82e-38 | 128 |
| MS.gene016326.t1 | MTR_1g030820 | 39.869 | 153 | 89 | 2 | 1 | 151 | 1 | 152 | 9.34e-38 | 126 |
| MS.gene016326.t1 | MTR_1g030840 | 37.821 | 156 | 89 | 4 | 1 | 149 | 1 | 155 | 1.03e-27 | 101 |
| MS.gene016326.t1 | MTR_1g031640 | 37.838 | 148 | 83 | 5 | 7 | 152 | 7 | 147 | 1.84e-24 | 92.8 |
| MS.gene016326.t1 | MTR_8g012550 | 33.793 | 145 | 93 | 3 | 6 | 149 | 8 | 150 | 2.64e-24 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016326.t1 | AT5G28010 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 7.41e-25 | 94.4 |
| MS.gene016326.t1 | AT5G28010 | 34.000 | 150 | 96 | 3 | 3 | 150 | 15 | 163 | 7.41e-25 | 94.4 |
| MS.gene016326.t1 | AT1G70890 | 34.667 | 150 | 95 | 3 | 3 | 150 | 7 | 155 | 4.95e-23 | 89.4 |
| MS.gene016326.t1 | AT1G70840 | 33.333 | 150 | 97 | 3 | 3 | 150 | 20 | 168 | 3.44e-22 | 87.4 |
| MS.gene016326.t1 | AT1G70830 | 34.000 | 150 | 96 | 3 | 3 | 150 | 22 | 170 | 1.09e-21 | 86.3 |
| MS.gene016326.t1 | AT1G70830 | 34.000 | 150 | 96 | 3 | 3 | 150 | 22 | 170 | 2.28e-21 | 86.3 |
| MS.gene016326.t1 | AT5G28000 | 32.000 | 150 | 99 | 3 | 3 | 150 | 13 | 161 | 4.93e-21 | 84.3 |
| MS.gene016326.t1 | AT1G70830 | 34.000 | 150 | 96 | 3 | 3 | 150 | 22 | 170 | 7.50e-21 | 85.9 |
| MS.gene016326.t1 | AT1G70830 | 34.000 | 150 | 96 | 3 | 3 | 150 | 22 | 170 | 1.72e-20 | 86.3 |
| MS.gene016326.t1 | AT1G70830 | 32.667 | 150 | 98 | 3 | 3 | 150 | 184 | 332 | 5.24e-19 | 82.0 |
| MS.gene016326.t1 | AT1G23130 | 30.872 | 149 | 101 | 2 | 3 | 150 | 10 | 157 | 2.21e-20 | 82.4 |
| MS.gene016326.t1 | AT1G70850 | 32.000 | 150 | 99 | 3 | 3 | 150 | 9 | 157 | 1.37e-19 | 82.4 |
| MS.gene016326.t1 | AT1G70830 | 32.667 | 150 | 98 | 3 | 3 | 150 | 137 | 285 | 2.27e-19 | 82.4 |
| MS.gene016326.t1 | AT1G70850 | 32.000 | 150 | 99 | 3 | 3 | 150 | 9 | 157 | 2.99e-19 | 82.8 |
| MS.gene016326.t1 | AT1G70850 | 32.857 | 140 | 91 | 3 | 13 | 150 | 175 | 313 | 4.88e-18 | 79.3 |
| MS.gene016326.t1 | AT1G70850 | 32.000 | 150 | 99 | 3 | 3 | 150 | 9 | 157 | 2.99e-19 | 82.8 |
| MS.gene016326.t1 | AT1G70850 | 32.857 | 140 | 91 | 3 | 13 | 150 | 175 | 313 | 4.88e-18 | 79.3 |
| MS.gene016326.t1 | AT1G70880 | 31.333 | 150 | 100 | 3 | 3 | 150 | 8 | 156 | 8.20e-19 | 78.6 |
| MS.gene016326.t1 | AT1G23120 | 29.167 | 144 | 97 | 3 | 7 | 150 | 7 | 145 | 1.08e-18 | 77.8 |
| MS.gene016326.t1 | AT1G70870 | 40.625 | 96 | 56 | 1 | 56 | 151 | 44 | 138 | 1.61e-18 | 77.0 |
| MS.gene016326.t1 | AT1G23120 | 29.167 | 144 | 97 | 3 | 7 | 150 | 57 | 195 | 2.40e-18 | 78.2 |
| MS.gene016326.t1 | AT1G14930 | 29.936 | 157 | 107 | 3 | 1 | 156 | 1 | 155 | 3.10e-17 | 74.3 |
| MS.gene016326.t1 | AT4G23670 | 31.373 | 153 | 102 | 3 | 1 | 152 | 1 | 151 | 7.39e-17 | 73.2 |
| MS.gene016326.t1 | AT1G35260 | 27.815 | 151 | 105 | 3 | 2 | 150 | 1 | 149 | 8.77e-17 | 73.2 |
| MS.gene016326.t1 | AT2G01520 | 28.758 | 153 | 106 | 3 | 1 | 152 | 1 | 151 | 9.50e-16 | 70.1 |
| MS.gene016326.t1 | AT1G14940 | 29.299 | 157 | 108 | 3 | 1 | 156 | 1 | 155 | 4.15e-15 | 68.6 |
| MS.gene016326.t1 | AT4G23680 | 29.605 | 152 | 104 | 3 | 1 | 151 | 1 | 150 | 1.28e-14 | 67.4 |
| MS.gene016326.t1 | AT4G14060 | 28.758 | 153 | 106 | 3 | 1 | 152 | 1 | 151 | 3.42e-14 | 66.2 |
| MS.gene016326.t1 | AT2G01530 | 28.105 | 153 | 107 | 3 | 1 | 152 | 1 | 151 | 1.06e-13 | 65.1 |
| MS.gene016326.t1 | AT1G30990 | 29.139 | 151 | 103 | 4 | 1 | 150 | 1 | 148 | 9.57e-13 | 62.4 |
| MS.gene016326.t1 | AT1G14950 | 26.752 | 157 | 112 | 3 | 1 | 156 | 1 | 155 | 5.11e-12 | 60.5 |
| MS.gene016326.t1 | AT1G35310 | 23.741 | 139 | 103 | 3 | 13 | 150 | 12 | 148 | 1.22e-11 | 59.3 |
| MS.gene016326.t1 | AT1G24020 | 29.605 | 152 | 105 | 2 | 1 | 151 | 1 | 151 | 1.31e-11 | 59.3 |
| MS.gene016326.t1 | AT1G24020 | 29.605 | 152 | 105 | 2 | 1 | 151 | 1 | 151 | 1.31e-11 | 59.3 |
Find 26 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCACTATAAGGTCTTTA+AGG | 0.238273 | 8.2:+56492487 | MS.gene016326:CDS |
| GGTAAGCTCAGTACTAAAAT+TGG | 0.249711 | 8.2:+56490817 | MS.gene016326:CDS |
| AATGGCTACATGGAACATTT+TGG | 0.264766 | 8.2:+56492602 | MS.gene016326:CDS |
| ATGGTACTGCTGCTGCTAAA+TGG | 0.372464 | 8.2:+56492537 | MS.gene016326:CDS |
| CACCCTTATCAATTACTTCA+AGG | 0.382574 | 8.2:-56492514 | None:intergenic |
| AAATGTTCCATGTAGCCATT+TGG | 0.413070 | 8.2:-56492599 | None:intergenic |
| CATCCTTGAAGTAATTGATA+AGG | 0.441221 | 8.2:+56492511 | MS.gene016326:CDS |
| AACACTTATAAGCTCTTTGG+TGG | 0.457999 | 8.2:+56492455 | MS.gene016326:CDS |
| TTCTAAGAAATGGTGCTCTC+TGG | 0.461766 | 8.2:+56490796 | None:intergenic |
| ATCTTCACCTTCATGAAGCT+TGG | 0.462385 | 8.2:-56490926 | None:intergenic |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | 8.2:+56490970 | MS.gene016326:CDS |
| ATCCTTGAAGTAATTGATAA+GGG | 0.489024 | 8.2:+56492512 | MS.gene016326:CDS |
| AGCTTCATGAAGGTGAAGAT+TGG | 0.494334 | 8.2:+56490929 | MS.gene016326:CDS |
| GAGAATATTGACCCTCCAAA+TGG | 0.506517 | 8.2:+56492584 | MS.gene016326:CDS |
| AGATATTGATAAGCACTATA+AGG | 0.507737 | 8.2:+56492478 | MS.gene016326:CDS |
| AGATTGGCATCACACTGATT+CGG | 0.519723 | 8.2:+56490945 | MS.gene016326:CDS |
| TGACCCTCCAAATGGCTACA+TGG | 0.521176 | 8.2:+56492592 | MS.gene016326:CDS |
| TGTTCCATGTAGCCATTTGG+AGG | 0.542543 | 8.2:-56492596 | None:intergenic |
| GAAGTAATTGATAAGGGTGA+TGG | 0.557588 | 8.2:+56492518 | MS.gene016326:CDS |
| CATCATACCAAGCTTCATGA+AGG | 0.587067 | 8.2:+56490919 | MS.gene016326:CDS |
| GTTGATGCTCATCTTGTCAA+AGG | 0.600604 | 8.2:+56492641 | MS.gene016326:CDS |
| ACACTGATTCGGTTAAACAC+TGG | 0.614381 | 8.2:+56490956 | MS.gene016326:CDS |
| GTTCCATGTAGCCATTTGGA+GGG | 0.622662 | 8.2:-56492595 | None:intergenic |
| TAGATTGTAGAACTTATCAG+AGG | 0.623153 | 8.2:-56490851 | None:intergenic |
| ATAATTCACAACAGATGGCA+AGG | 0.633049 | 8.2:+56492382 | MS.gene016326:intron |
| AGATTGTAGAACTTATCAGA+GGG | 0.653447 | 8.2:-56490850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAAATTATGAATTATTT+GGG | + | chr8.2:56492130-56492149 | MS.gene016326:intron | 10.0% |
| !! | TATAAAAAATGTTAATTGTT+AGG | - | chr8.2:56491175-56491194 | None:intergenic | 10.0% |
| !! | TATGAACAATAAATATTTAT+AGG | - | chr8.2:56492194-56492213 | None:intergenic | 10.0% |
| !! | TGTAAAAATTATGAATTATT+TGG | + | chr8.2:56492129-56492148 | MS.gene016326:intron | 10.0% |
| !!! | AATAAAATAGTTTTCTTTTT+AGG | + | chr8.2:56492253-56492272 | MS.gene016326:intron | 10.0% |
| !!! | AGTTTATTTGTTAAAAAAAT+AGG | + | chr8.2:56492289-56492308 | MS.gene016326:intron | 10.0% |
| !!! | ATAAAATAGTTTTCTTTTTA+GGG | + | chr8.2:56492254-56492273 | MS.gene016326:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTTTTTG+TGG | - | chr8.2:56491892-56491911 | None:intergenic | 10.0% |
| !!! | TGCTTTTAATATTTTTTTTA+TGG | - | chr8.2:56491963-56491982 | None:intergenic | 10.0% |
| !! | AATCATATAAAGAATATATG+TGG | + | chr8.2:56492164-56492183 | MS.gene016326:intron | 15.0% |
| !! | ATAAATAAAATTAACAACAC+TGG | + | chr8.2:56491715-56491734 | MS.gene016326:intron | 15.0% |
| !! | ATGATTACAAACTATTAAAA+TGG | - | chr8.2:56491481-56491500 | None:intergenic | 15.0% |
| !! | TCATAAAATATGTCAATAAT+TGG | + | chr8.2:56491678-56491697 | MS.gene016326:intron | 15.0% |
| !!! | AATTTTATTTATGTTGTACT+GGG | - | chr8.2:56491707-56491726 | None:intergenic | 15.0% |
| !!! | TAATTTTATTTATGTTGTAC+TGG | - | chr8.2:56491708-56491727 | None:intergenic | 15.0% |
| !!! | TCTTTAGAAAAAATATTCAT+TGG | + | chr8.2:56492218-56492237 | MS.gene016326:intron | 15.0% |
| !!! | TTATATCGATTATTTATTAC+TGG | - | chr8.2:56491758-56491777 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | chr8.2:56491889-56491908 | None:intergenic | 15.0% |
| !! | AATAATCCTCTATAGATATA+AGG | + | chr8.2:56491542-56491561 | MS.gene016326:intron | 20.0% |
| !! | AATCATATAAGATGATGATT+TGG | - | chr8.2:56491032-56491051 | None:intergenic | 20.0% |
| !! | CAAATGAATTCTATAAAGAT+TGG | + | chr8.2:56491134-56491153 | MS.gene016326:intron | 20.0% |
| !! | CAATCTTTATAGAATTCATT+TGG | - | chr8.2:56491136-56491155 | None:intergenic | 20.0% |
| !!! | TTAAAGAGATTTGATTTTGT+AGG | + | chr8.2:56491420-56491439 | MS.gene016326:intron | 20.0% |
| ! | AAAAACACTTATAAGCTCTT+TGG | + | chr8.2:56492452-56492471 | MS.gene016326:CDS | 25.0% |
| ! | AAAATGTCGAAAATAATCCT+AGG | + | chr8.2:56491609-56491628 | MS.gene016326:intron | 25.0% |
| ! | AATATGTTACTGTAGTTGTT+AGG | - | chr8.2:56491203-56491222 | None:intergenic | 25.0% |
| ! | AGATATTGATAAGCACTATA+AGG | + | chr8.2:56492478-56492497 | MS.gene016326:CDS | 25.0% |
| ! | ATCCTTGAAGTAATTGATAA+GGG | + | chr8.2:56492512-56492531 | MS.gene016326:CDS | 25.0% |
| ! | CGACATAATAATATTTGCAA+AGG | + | chr8.2:56491447-56491466 | MS.gene016326:intron | 25.0% |
| ! | CTATACTTCTAACAGAAAAA+AGG | + | chr8.2:56491090-56491109 | MS.gene016326:intron | 25.0% |
| !! | CTTTTGATCTAAAAGATACA+AGG | + | chr8.2:56491253-56491272 | MS.gene016326:intron | 25.0% |
| AAAAGAGTCAAAAGAGAAAG+AGG | - | chr8.2:56491309-56491328 | None:intergenic | 30.0% | |
| AGATTGTAGAACTTATCAGA+GGG | - | chr8.2:56490853-56490872 | None:intergenic | 30.0% | |
| AGTCAACCTTATATCTATAG+AGG | - | chr8.2:56491551-56491570 | None:intergenic | 30.0% | |
| CATCCTTGAAGTAATTGATA+AGG | + | chr8.2:56492511-56492530 | MS.gene016326:CDS | 30.0% | |
| CGAAAATAATCCTAGGTATA+AGG | + | chr8.2:56491616-56491635 | MS.gene016326:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr8.2:56491845-56491864 | MS.gene016326:intron | 30.0% | |
| TAAGCACTATAAGGTCTTTA+AGG | + | chr8.2:56492487-56492506 | MS.gene016326:CDS | 30.0% | |
| TAGATTGTAGAACTTATCAG+AGG | - | chr8.2:56490854-56490873 | None:intergenic | 30.0% | |
| TGATCTAAAAGATACAAGGT+TGG | + | chr8.2:56491257-56491276 | MS.gene016326:intron | 30.0% | |
| ! | GTTTGTTGAATGTTAGTTTG+CGG | - | chr8.2:56491389-56491408 | None:intergenic | 30.0% |
| !! | AGAGATTTGATTTTGTAGGA+AGG | + | chr8.2:56491424-56491443 | MS.gene016326:intron | 30.0% |
| !! | ATAGATATAAGGTTGACTTG+TGG | + | chr8.2:56491553-56491572 | MS.gene016326:intron | 30.0% |
| !! | TCTCTTTTGACTCTTTTGAA+CGG | + | chr8.2:56491312-56491331 | MS.gene016326:intron | 30.0% |
| !! | TTTGTTGAATGTTAGTTTGC+GGG | - | chr8.2:56491388-56491407 | None:intergenic | 30.0% |
| !!! | CAGTAACATTTTGCTATTGT+CGG | - | chr8.2:56491920-56491939 | None:intergenic | 30.0% |
| AAACACTGGACTTATGTCAT+AGG | + | chr8.2:56490970-56490989 | MS.gene016326:CDS | 35.0% | |
| AAAGAGAAAGAGGTGATTGA+AGG | - | chr8.2:56491299-56491318 | None:intergenic | 35.0% | |
| AAATGTTCCATGTAGCCATT+TGG | - | chr8.2:56492602-56492621 | None:intergenic | 35.0% | |
| AACACTTATAAGCTCTTTGG+TGG | + | chr8.2:56492455-56492474 | MS.gene016326:CDS | 35.0% | |
| ACAAGTCAAACCTTATACCT+AGG | - | chr8.2:56491629-56491648 | None:intergenic | 35.0% | |
| ATAATTCACAACAGATGGCA+AGG | + | chr8.2:56492382-56492401 | MS.gene016326:intron | 35.0% | |
| CACCCTTATCAATTACTTCA+AGG | - | chr8.2:56492517-56492536 | None:intergenic | 35.0% | |
| CCATCTGTTGTGAATTATGA+CGG | - | chr8.2:56492380-56492399 | None:intergenic | 35.0% | |
| CTTGAAAATCTCATGCCAAA+TGG | + | chr8.2:56491361-56491380 | MS.gene016326:intron | 35.0% | |
| GAAGTAATTGATAAGGGTGA+TGG | + | chr8.2:56492518-56492537 | MS.gene016326:CDS | 35.0% | |
| GGTAAGCTCAGTACTAAAAT+TGG | + | chr8.2:56490817-56490836 | MS.gene016326:CDS | 35.0% | |
| ! | AATGGCTACATGGAACATTT+TGG | + | chr8.2:56492602-56492621 | MS.gene016326:CDS | 35.0% |
| ! | TAAGCTTAACTCAGTTGGTA+TGG | + | chr8.2:56491823-56491842 | MS.gene016326:intron | 35.0% |
| !! | TAGGTATAAGGTTTGACTTG+TGG | + | chr8.2:56491628-56491647 | MS.gene016326:intron | 35.0% |
| !! | TATAAGGTTTGACTTGTGGT+TGG | + | chr8.2:56491632-56491651 | MS.gene016326:intron | 35.0% |
| !! | TGATGATTTGGTTATCGATC+AGG | - | chr8.2:56491020-56491039 | None:intergenic | 35.0% |
| !! | TTTGGCATGAGATTTTCAAG+TGG | - | chr8.2:56491361-56491380 | None:intergenic | 35.0% |
| ACTCGTAAGCTTAACTCAGT+TGG | + | chr8.2:56491818-56491837 | MS.gene016326:intron | 40.0% | |
| AGAAAGAGGTGATTGAAGGA+GGG | - | chr8.2:56491295-56491314 | None:intergenic | 40.0% | |
| AGCTTCATGAAGGTGAAGAT+TGG | + | chr8.2:56490929-56490948 | MS.gene016326:CDS | 40.0% | |
| ATCTTCACCTTCATGAAGCT+TGG | - | chr8.2:56490929-56490948 | None:intergenic | 40.0% | |
| CATCATACCAAGCTTCATGA+AGG | + | chr8.2:56490919-56490938 | MS.gene016326:CDS | 40.0% | |
| CCGTCATAATTCACAACAGA+TGG | + | chr8.2:56492377-56492396 | MS.gene016326:intron | 40.0% | |
| GAGAATATTGACCCTCCAAA+TGG | + | chr8.2:56492584-56492603 | MS.gene016326:CDS | 40.0% | |
| GTTGATGCTCATCTTGTCAA+AGG | + | chr8.2:56492641-56492660 | MS.gene016326:CDS | 40.0% | |
| TGTTGTGAATTATGACGGCA+CGG | - | chr8.2:56492375-56492394 | None:intergenic | 40.0% | |
| ! | AGATTGGCATCACACTGATT+CGG | + | chr8.2:56490945-56490964 | MS.gene016326:CDS | 40.0% |
| !! | ACACTGATTCGGTTAAACAC+TGG | + | chr8.2:56490956-56490975 | MS.gene016326:CDS | 40.0% |
| !! | GAACATTTTGGCAAAGTCAC+AGG | + | chr8.2:56492614-56492633 | MS.gene016326:CDS | 40.0% |
| !!! | AGATTTTCAAGTGGAAGGCT+GGG | - | chr8.2:56491352-56491371 | None:intergenic | 40.0% |
| !!! | GCATGAGATTTTCAAGTGGA+AGG | - | chr8.2:56491357-56491376 | None:intergenic | 40.0% |
| ATGGTACTGCTGCTGCTAAA+TGG | + | chr8.2:56492537-56492556 | MS.gene016326:CDS | 45.0% | |
| GAGAAAGAGGTGATTGAAGG+AGG | - | chr8.2:56491296-56491315 | None:intergenic | 45.0% | |
| GTTCCATGTAGCCATTTGGA+GGG | - | chr8.2:56492598-56492617 | None:intergenic | 45.0% | |
| GTTGTGAATTATGACGGCAC+GGG | - | chr8.2:56492374-56492393 | None:intergenic | 45.0% | |
| TGTTCCATGTAGCCATTTGG+AGG | - | chr8.2:56492599-56492618 | None:intergenic | 45.0% | |
| !! | TGTTAGTTTGCGGGACCATT+TGG | - | chr8.2:56491379-56491398 | None:intergenic | 45.0% |
| !!! | GAGATTTTCAAGTGGAAGGC+TGG | - | chr8.2:56491353-56491372 | None:intergenic | 45.0% |
| TGACCCTCCAAATGGCTACA+TGG | + | chr8.2:56492592-56492611 | MS.gene016326:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 56490805 | 56492682 | 56490805 | ID=MS.gene016326 |
| chr8.2 | mRNA | 56490805 | 56492682 | 56490805 | ID=MS.gene016326.t1;Parent=MS.gene016326 |
| chr8.2 | exon | 56490805 | 56490991 | 56490805 | ID=MS.gene016326.t1.exon1;Parent=MS.gene016326.t1 |
| chr8.2 | CDS | 56490805 | 56490991 | 56490805 | ID=cds.MS.gene016326.t1;Parent=MS.gene016326.t1 |
| chr8.2 | exon | 56492396 | 56492682 | 56492396 | ID=MS.gene016326.t1.exon2;Parent=MS.gene016326.t1 |
| chr8.2 | CDS | 56492396 | 56492682 | 56492396 | ID=cds.MS.gene016326.t1;Parent=MS.gene016326.t1 |
| Gene Sequence |
| Protein sequence |
