Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59869.t1 | XP_013445249.1 | 94.8 | 154 | 8 | 0 | 1 | 154 | 1 | 154 | 4.10E-82 | 313.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59869.t1 | Q941R6 | 35.9 | 153 | 94 | 4 | 3 | 152 | 20 | 171 | 2.5e-19 | 96.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59869.t1 | I3T217 | 94.8 | 154 | 8 | 0 | 1 | 154 | 1 | 154 | 3.0e-82 | 313.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59869.t1 | MTR_8g045735 | 94.805 | 154 | 8 | 0 | 1 | 154 | 1 | 154 | 5.11e-108 | 304 |
| MS.gene59869.t1 | MTR_8g045695 | 89.744 | 156 | 16 | 0 | 1 | 156 | 1 | 156 | 1.05e-103 | 293 |
| MS.gene59869.t1 | MTR_8g045665 | 84.615 | 156 | 24 | 0 | 1 | 156 | 1 | 156 | 1.14e-96 | 276 |
| MS.gene59869.t1 | MTR_8g045640 | 83.333 | 156 | 26 | 0 | 1 | 156 | 1 | 156 | 1.61e-93 | 268 |
| MS.gene59869.t1 | MTR_8g045560 | 81.410 | 156 | 29 | 0 | 1 | 156 | 1 | 156 | 4.19e-92 | 264 |
| MS.gene59869.t1 | MTR_8g045520 | 73.885 | 157 | 40 | 1 | 1 | 156 | 1 | 157 | 3.52e-84 | 244 |
| MS.gene59869.t1 | MTR_8g045490 | 71.975 | 157 | 42 | 2 | 1 | 156 | 1 | 156 | 3.88e-81 | 236 |
| MS.gene59869.t1 | MTR_8g045400 | 70.064 | 157 | 45 | 2 | 1 | 156 | 1 | 156 | 7.01e-79 | 231 |
| MS.gene59869.t1 | MTR_8g045555 | 68.421 | 152 | 47 | 1 | 1 | 151 | 1 | 152 | 7.37e-76 | 223 |
| MS.gene59869.t1 | MTR_8g045570 | 67.105 | 152 | 49 | 1 | 1 | 151 | 1 | 152 | 2.43e-75 | 221 |
| MS.gene59869.t1 | MTR_8g045300 | 64.744 | 156 | 54 | 1 | 1 | 155 | 1 | 156 | 2.99e-74 | 219 |
| MS.gene59869.t1 | MTR_1g030810 | 42.484 | 153 | 84 | 3 | 1 | 150 | 1 | 152 | 7.37e-39 | 129 |
| MS.gene59869.t1 | MTR_1g030820 | 39.216 | 153 | 89 | 3 | 1 | 150 | 1 | 152 | 4.27e-37 | 125 |
| MS.gene59869.t1 | MTR_1g030840 | 38.462 | 156 | 87 | 5 | 1 | 148 | 1 | 155 | 4.95e-28 | 102 |
| MS.gene59869.t1 | MTR_8g012550 | 34.000 | 150 | 95 | 4 | 6 | 153 | 8 | 155 | 3.92e-25 | 94.7 |
| MS.gene59869.t1 | MTR_1g031640 | 37.162 | 148 | 83 | 6 | 7 | 151 | 7 | 147 | 5.06e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59869.t1 | AT5G28010 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 2.39e-25 | 95.5 |
| MS.gene59869.t1 | AT5G28010 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 2.39e-25 | 95.5 |
| MS.gene59869.t1 | AT1G70840 | 35.948 | 153 | 94 | 4 | 3 | 152 | 20 | 171 | 1.23e-23 | 91.3 |
| MS.gene59869.t1 | AT1G70890 | 36.601 | 153 | 93 | 4 | 3 | 152 | 7 | 158 | 3.58e-23 | 89.7 |
| MS.gene59869.t1 | AT1G70830 | 36.538 | 156 | 89 | 5 | 3 | 152 | 22 | 173 | 1.50e-22 | 88.6 |
| MS.gene59869.t1 | AT1G70830 | 36.306 | 157 | 90 | 5 | 3 | 153 | 22 | 174 | 1.68e-22 | 89.0 |
| MS.gene59869.t1 | AT5G28000 | 33.333 | 153 | 98 | 4 | 3 | 152 | 13 | 164 | 4.66e-22 | 87.0 |
| MS.gene59869.t1 | AT1G70830 | 36.306 | 157 | 90 | 5 | 3 | 153 | 22 | 174 | 1.26e-21 | 87.8 |
| MS.gene59869.t1 | AT1G70830 | 36.538 | 156 | 89 | 5 | 3 | 152 | 137 | 288 | 1.92e-21 | 88.2 |
| MS.gene59869.t1 | AT1G70830 | 35.052 | 97 | 61 | 2 | 59 | 153 | 31 | 127 | 8.72e-12 | 61.6 |
| MS.gene59869.t1 | AT1G70830 | 36.306 | 157 | 90 | 5 | 3 | 153 | 22 | 174 | 2.05e-21 | 88.6 |
| MS.gene59869.t1 | AT1G70830 | 36.538 | 156 | 89 | 5 | 3 | 152 | 184 | 335 | 4.99e-21 | 87.8 |
| MS.gene59869.t1 | AT1G70850 | 37.671 | 146 | 81 | 5 | 13 | 152 | 175 | 316 | 3.71e-21 | 87.8 |
| MS.gene59869.t1 | AT1G70850 | 34.641 | 153 | 90 | 5 | 3 | 149 | 9 | 157 | 6.38e-20 | 84.3 |
| MS.gene59869.t1 | AT1G70850 | 37.671 | 146 | 81 | 5 | 13 | 152 | 175 | 316 | 3.71e-21 | 87.8 |
| MS.gene59869.t1 | AT1G70850 | 34.641 | 153 | 90 | 5 | 3 | 149 | 9 | 157 | 6.38e-20 | 84.3 |
| MS.gene59869.t1 | AT1G70850 | 34.641 | 153 | 90 | 5 | 3 | 149 | 9 | 157 | 3.18e-20 | 84.0 |
| MS.gene59869.t1 | AT4G23670 | 33.750 | 160 | 88 | 6 | 1 | 151 | 1 | 151 | 1.28e-19 | 80.1 |
| MS.gene59869.t1 | AT1G70870 | 44.792 | 96 | 51 | 2 | 56 | 150 | 44 | 138 | 1.38e-19 | 79.7 |
| MS.gene59869.t1 | AT1G14930 | 29.560 | 159 | 104 | 5 | 1 | 155 | 1 | 155 | 2.49e-19 | 79.7 |
| MS.gene59869.t1 | AT2G01520 | 29.677 | 155 | 101 | 5 | 1 | 151 | 1 | 151 | 4.73e-18 | 76.3 |
| MS.gene59869.t1 | AT1G24020 | 31.579 | 152 | 101 | 3 | 1 | 150 | 1 | 151 | 5.35e-17 | 73.6 |
| MS.gene59869.t1 | AT1G24020 | 31.579 | 152 | 101 | 3 | 1 | 150 | 1 | 151 | 5.35e-17 | 73.6 |
| MS.gene59869.t1 | AT2G01530 | 30.323 | 155 | 100 | 5 | 1 | 151 | 1 | 151 | 2.50e-16 | 71.6 |
| MS.gene59869.t1 | AT1G23120 | 28.369 | 141 | 95 | 4 | 10 | 149 | 10 | 145 | 3.32e-16 | 71.2 |
| MS.gene59869.t1 | AT4G14060 | 29.677 | 155 | 101 | 5 | 1 | 151 | 1 | 151 | 3.36e-16 | 71.2 |
| MS.gene59869.t1 | AT4G23680 | 29.221 | 154 | 101 | 5 | 1 | 150 | 1 | 150 | 5.37e-16 | 70.9 |
| MS.gene59869.t1 | AT1G14940 | 28.302 | 159 | 106 | 5 | 1 | 155 | 1 | 155 | 5.80e-16 | 70.9 |
| MS.gene59869.t1 | AT1G23120 | 28.369 | 141 | 95 | 4 | 10 | 149 | 60 | 195 | 9.73e-16 | 71.2 |
| MS.gene59869.t1 | AT1G70880 | 30.065 | 153 | 103 | 4 | 3 | 152 | 8 | 159 | 1.01e-15 | 70.5 |
| MS.gene59869.t1 | AT1G14950 | 27.044 | 159 | 108 | 5 | 1 | 155 | 1 | 155 | 2.60e-14 | 66.6 |
| MS.gene59869.t1 | AT1G30990 | 27.815 | 151 | 104 | 5 | 1 | 149 | 1 | 148 | 4.87e-14 | 65.9 |
| MS.gene59869.t1 | AT3G26460 | 29.677 | 155 | 102 | 4 | 1 | 151 | 1 | 152 | 1.36e-13 | 64.7 |
| MS.gene59869.t1 | AT1G14960 | 25.161 | 155 | 112 | 4 | 1 | 153 | 1 | 153 | 1.01e-11 | 59.7 |
| MS.gene59869.t1 | AT3G26450 | 26.923 | 156 | 105 | 6 | 1 | 151 | 1 | 152 | 3.78e-11 | 58.2 |
Find 32 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATGACCATCAATATCTT+TGG | 0.335693 | 8.3:-53532262 | None:intergenic |
| AAGATCACTTTCAAGCTGTT+TGG | 0.356858 | 8.3:+53532084 | MS.gene59869:CDS |
| AAGTTCAGTGATAAGTTTAC+CGG | 0.386674 | 8.3:-53526210 | None:intergenic |
| TGGAGATATTGAAAACTATA+AGG | 0.391039 | 8.3:+53532107 | MS.gene59869:CDS |
| ATGGAAGTTCTGCTGTTAGA+TGG | 0.407851 | 8.3:+53532166 | MS.gene59869:CDS |
| AGGTAGTCCATCCAGCCATT+TGG | 0.456227 | 8.3:-53532228 | None:intergenic |
| ATCACTTTCAAGCTGTTTGG+TGG | 0.460728 | 8.3:+53532087 | MS.gene59869:CDS |
| AAAGGAACCAAAGATATTGA+TGG | 0.467555 | 8.3:+53532255 | MS.gene59869:CDS |
| GGTAAACTTATCACTGAACT+TGG | 0.483255 | 8.3:+53526212 | MS.gene59869:CDS |
| AGATTGGCATCACACTGATT+CGG | 0.509801 | 8.3:+53526340 | MS.gene59869:CDS |
| TATCTTTGGTTCCTTTGCTA+AGG | 0.518303 | 8.3:-53532248 | None:intergenic |
| TAAACACTGGACTTATGTCA+TGG | 0.531165 | 8.3:+53526364 | MS.gene59869:CDS |
| AGCTTCATGAAGGAGAAGAT+TGG | 0.532439 | 8.3:+53526324 | MS.gene59869:CDS |
| CATCATACTAAGCTTCATGA+AGG | 0.577072 | 8.3:+53526314 | MS.gene59869:CDS |
| ATGTTGATACTCCAAATGGC+TGG | 0.578150 | 8.3:+53532217 | MS.gene59869:CDS |
| GAAGTGCTTAACAAGGCTGA+TGG | 0.580204 | 8.3:+53532147 | MS.gene59869:CDS |
| ATTGATGGTCATCTTGTCAA+GGG | 0.586933 | 8.3:+53532270 | MS.gene59869:CDS |
| TGATACTCCAAATGGCTGGA+TGG | 0.587093 | 8.3:+53532221 | MS.gene59869:CDS |
| TATTGATGGTCATCTTGTCA+AGG | 0.589389 | 8.3:+53532269 | MS.gene59869:CDS |
| GAGGATGTTGATACTCCAAA+TGG | 0.593330 | 8.3:+53532213 | MS.gene59869:CDS |
| AAACACTGGACTTATGTCAT+GGG | 0.597721 | 8.3:+53526365 | MS.gene59869:CDS |
| GTAAACTTATCACTGAACTT+GGG | 0.613162 | 8.3:+53526213 | MS.gene59869:CDS |
| ACACTGATTCGGTTAAACAC+TGG | 0.614381 | 8.3:+53526351 | MS.gene59869:CDS |
| CATCTTAGAAGTGCTTAACA+AGG | 0.644958 | 8.3:+53532140 | MS.gene59869:CDS |
| TTGATGGTCATCTTGTCAAG+GGG | 0.646397 | 8.3:+53532271 | MS.gene59869:CDS |
| TGGATGGACTACCTTAGCAA+AGG | 0.650698 | 8.3:+53532237 | MS.gene59869:CDS |
| GAACTTGGGATCAAAACACC+CGG | 0.651017 | 8.3:+53526227 | MS.gene59869:CDS |
| TGGTGCACACATGCAATGAG+AGG | 0.653738 | 8.3:+53532034 | MS.gene59869:CDS |
| TGACATAACAATAGATGGTG+TGG | 0.685826 | 8.3:+53532014 | MS.gene59869:intron |
| TGATTATGAGAAGAACAATG+AGG | 0.694185 | 8.3:+53532194 | MS.gene59869:CDS |
| TGATGGTCATCTTGTCAAGG+GGG | 0.696400 | 8.3:+53532272 | MS.gene59869:CDS |
| GGTGCACACATGCAATGAGA+GGG | 0.742210 | 8.3:+53532035 | MS.gene59869:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATATATATATATAT+AGG | + | chr8.3:53528539-53528558 | MS.gene59869:intron | 0.0% |
| !! | AAGAAAACAATATAAATAAA+AGG | - | chr8.3:53527541-53527560 | None:intergenic | 10.0% |
| !! | AGAAAACAATATAAATAAAA+GGG | - | chr8.3:53527540-53527559 | None:intergenic | 10.0% |
| !! | ATTTATTAATAAACGTATTA+TGG | - | chr8.3:53526675-53526694 | None:intergenic | 10.0% |
| !!! | AATAAAAATTATACTTTTCA+AGG | + | chr8.3:53526466-53526485 | MS.gene59869:intron | 10.0% |
| !!! | AATTAATTGTTGTATTATTT+TGG | + | chr8.3:53527735-53527754 | MS.gene59869:intron | 10.0% |
| !! | AAAAGTAATTAATATCTGAA+CGG | - | chr8.3:53528634-53528653 | None:intergenic | 15.0% |
| !! | ATAGAAACAAGAAAATAAAA+AGG | - | chr8.3:53528953-53528972 | None:intergenic | 15.0% |
| !! | ATTATAAATGAAGTCAATAT+AGG | - | chr8.3:53526590-53526609 | None:intergenic | 15.0% |
| !! | GAAAAAAAATAAATGATATC+AGG | - | chr8.3:53529836-53529855 | None:intergenic | 15.0% |
| !! | GCGTAAAATTAAATAAAAAA+AGG | + | chr8.3:53526749-53526768 | MS.gene59869:intron | 15.0% |
| !! | GGATTGTAAAAAAAAAAAAA+AGG | + | chr8.3:53529241-53529260 | MS.gene59869:intron | 15.0% |
| !! | GTAAATAAAAAAATGTATTG+TGG | + | chr8.3:53530769-53530788 | MS.gene59869:intron | 15.0% |
| !! | GTAAATATATTGAAAATTTG+AGG | + | chr8.3:53526985-53527004 | MS.gene59869:intron | 15.0% |
| !! | GTGTCAAATATAAAATAAAA+AGG | + | chr8.3:53527050-53527069 | MS.gene59869:intron | 15.0% |
| !! | TCAAATATAAAATAAAAAGG+CGG | + | chr8.3:53527053-53527072 | MS.gene59869:intron | 15.0% |
| !! | TCATAATAAAAACACTAAAA+AGG | - | chr8.3:53530589-53530608 | None:intergenic | 15.0% |
| !! | TGAAAAAGATTGAAATTAAA+GGG | - | chr8.3:53527189-53527208 | None:intergenic | 15.0% |
| !!! | AAAAAATCTTTTTAAGAATG+AGG | + | chr8.3:53529484-53529503 | MS.gene59869:intron | 15.0% |
| !!! | AAAAATCTTTTTAAGAATGA+GGG | + | chr8.3:53529485-53529504 | MS.gene59869:intron | 15.0% |
| !!! | AAACCTATTTTATTACAAAA+CGG | - | chr8.3:53530926-53530945 | None:intergenic | 15.0% |
| !!! | AAATTAATAACACTTTTTGA+AGG | - | chr8.3:53528471-53528490 | None:intergenic | 15.0% |
| !!! | AAGATTAGCTAAAATTATTA+CGG | + | chr8.3:53529583-53529602 | MS.gene59869:intron | 15.0% |
| !!! | ACCAGTTTTTTATAATTAAA+GGG | + | chr8.3:53530964-53530983 | MS.gene59869:intron | 15.0% |
| !!! | ATTTTTATTAGACAAATTGT+AGG | - | chr8.3:53526455-53526474 | None:intergenic | 15.0% |
| !!! | CAAAAGTTTTTTATTGTTTT+TGG | + | chr8.3:53531978-53531997 | MS.gene59869:intron | 15.0% |
| !!! | TATAAAAGTCAAACTTTTAT+CGG | + | chr8.3:53531681-53531700 | MS.gene59869:intron | 15.0% |
| !!! | TTTCTTAACAAATGTTTTAA+GGG | + | chr8.3:53531917-53531936 | MS.gene59869:intron | 15.0% |
| !! | AAAAAAAAAAAAGGATGAAG+AGG | + | chr8.3:53529250-53529269 | MS.gene59869:intron | 20.0% |
| !! | AAGTATAAATATTGCAAACA+TGG | - | chr8.3:53529198-53529217 | None:intergenic | 20.0% |
| !! | ACCCTTTAATTATAAAAAAC+TGG | - | chr8.3:53530968-53530987 | None:intergenic | 20.0% |
| !! | ATACCTGATTTATTAAAAAG+AGG | + | chr8.3:53526934-53526953 | MS.gene59869:intron | 20.0% |
| !! | ATTTATACTTCTCAGAAAAT+AGG | + | chr8.3:53529208-53529227 | MS.gene59869:intron | 20.0% |
| !! | GAAAAAGATTGAAATTAAAG+GGG | - | chr8.3:53527188-53527207 | None:intergenic | 20.0% |
| !! | GTCTTAAATCTAAAAAAAAC+AGG | + | chr8.3:53531075-53531094 | MS.gene59869:intron | 20.0% |
| !! | GTGAAAAAGATTGAAATTAA+AGG | - | chr8.3:53527190-53527209 | None:intergenic | 20.0% |
| !! | GTTAAAAAAAAAAATCAACC+TGG | - | chr8.3:53530838-53530857 | None:intergenic | 20.0% |
| !! | TAATTAGATTAGAGACAAAA+GGG | + | chr8.3:53528897-53528916 | MS.gene59869:intron | 20.0% |
| !! | TGTATTAAAATTGTAAGTTG+AGG | - | chr8.3:53530699-53530718 | None:intergenic | 20.0% |
| !! | TTAATTAGATTAGAGACAAA+AGG | + | chr8.3:53528896-53528915 | MS.gene59869:intron | 20.0% |
| !! | TTTATCACTAGTACATAAAA+GGG | - | chr8.3:53531109-53531128 | None:intergenic | 20.0% |
| !!! | AACCTATTTTATTACAAAAC+GGG | - | chr8.3:53530925-53530944 | None:intergenic | 20.0% |
| !!! | ACTTGTTTTTTACTAAAATC+AGG | - | chr8.3:53527032-53527051 | None:intergenic | 20.0% |
| !!! | ATGATTTTGACTATCTTTAT+TGG | - | chr8.3:53530359-53530378 | None:intergenic | 20.0% |
| !!! | ATTATTGTATTTTCTCTCTT+TGG | - | chr8.3:53531458-53531477 | None:intergenic | 20.0% |
| !!! | ATTGTTTAGGTTATTTGATT+AGG | - | chr8.3:53531540-53531559 | None:intergenic | 20.0% |
| !!! | CACCAGTTTTTTATAATTAA+AGG | + | chr8.3:53530963-53530982 | MS.gene59869:intron | 20.0% |
| !!! | CCTGATTTTTGTAATTAAAA+AGG | + | chr8.3:53530878-53530897 | MS.gene59869:intron | 20.0% |
| !!! | CCTTTTTAATTACAAAAATC+AGG | - | chr8.3:53530881-53530900 | None:intergenic | 20.0% |
| !!! | CTTTCTTAACAAATGTTTTA+AGG | + | chr8.3:53531916-53531935 | MS.gene59869:intron | 20.0% |
| !!! | TAAATTTCTTTTCTAATTGC+TGG | + | chr8.3:53530068-53530087 | MS.gene59869:intron | 20.0% |
| !!! | TCAATCTTTTATATTTCAGA+AGG | - | chr8.3:53530525-53530544 | None:intergenic | 20.0% |
| !!! | TGATTTTGACTATCTTTATT+GGG | - | chr8.3:53530358-53530377 | None:intergenic | 20.0% |
| !!! | TGGTGAAACTAATATTTTTA+AGG | + | chr8.3:53531805-53531824 | MS.gene59869:intron | 20.0% |
| !!! | TGGTTTTGAGAAAATTTTAA+TGG | + | chr8.3:53527755-53527774 | MS.gene59869:intron | 20.0% |
| !!! | TTATTGTATTTTCTCTCTTT+GGG | - | chr8.3:53531457-53531476 | None:intergenic | 20.0% |
| !!! | TTGCTTTGTAACAATATTTT+GGG | + | chr8.3:53529891-53529910 | MS.gene59869:intron | 20.0% |
| !!! | TTTGCTTTGTAACAATATTT+TGG | + | chr8.3:53529890-53529909 | MS.gene59869:intron | 20.0% |
| !!! | TTTTATCACTAGTACATAAA+AGG | - | chr8.3:53531110-53531129 | None:intergenic | 20.0% |
| ! | AAAAAAAAAAATCAACCTGG+AGG | - | chr8.3:53530835-53530854 | None:intergenic | 25.0% |
| ! | AAAAGATTGATGAAGACATT+TGG | + | chr8.3:53530535-53530554 | MS.gene59869:intron | 25.0% |
| ! | AAAGAAATCATAAAACCCTA+AGG | - | chr8.3:53531786-53531805 | None:intergenic | 25.0% |
| ! | AAAGGAAACAAGAAAGAAAA+GGG | + | chr8.3:53529051-53529070 | MS.gene59869:intron | 25.0% |
| ! | AAGAGACAGAAATATTGATA+TGG | + | chr8.3:53530458-53530477 | MS.gene59869:intron | 25.0% |
| ! | AAGCAATGCAATAGAATAAA+TGG | + | chr8.3:53529305-53529324 | MS.gene59869:intron | 25.0% |
| ! | AATATAAAATAAAAAGGCGG+TGG | + | chr8.3:53527056-53527075 | MS.gene59869:intron | 25.0% |
| ! | AGAGAAATCAATACAACAAA+TGG | + | chr8.3:53530309-53530328 | MS.gene59869:intron | 25.0% |
| ! | ATGAGATAGTGAAAACTTAA+TGG | - | chr8.3:53528275-53528294 | None:intergenic | 25.0% |
| ! | ATTAGCTAAAATTATTACGG+AGG | + | chr8.3:53529586-53529605 | MS.gene59869:intron | 25.0% |
| ! | ATTGCCTTTATAAGTTCTTT+AGG | - | chr8.3:53526504-53526523 | None:intergenic | 25.0% |
| ! | CAAATCAAATTGTGTTCAAA+TGG | - | chr8.3:53531510-53531529 | None:intergenic | 25.0% |
| ! | CTTAGGGTTAATAAAACTTA+TGG | + | chr8.3:53531375-53531394 | MS.gene59869:intron | 25.0% |
| ! | CTTGTTAAAGAATGCATAAA+TGG | - | chr8.3:53528035-53528054 | None:intergenic | 25.0% |
| ! | GAAAACAACTCTAAATTCAT+GGG | + | chr8.3:53527928-53527947 | MS.gene59869:intron | 25.0% |
| ! | GATACTGAATCAATATGAAA+CGG | - | chr8.3:53527319-53527338 | None:intergenic | 25.0% |
| ! | GATGAATGTTATTGTAGTAT+TGG | + | chr8.3:53530607-53530626 | MS.gene59869:intron | 25.0% |
| ! | GTACAAATCAAGTCAAATTT+AGG | - | chr8.3:53527800-53527819 | None:intergenic | 25.0% |
| ! | TAAAAAAATGTATTGTGGAG+TGG | + | chr8.3:53530774-53530793 | MS.gene59869:intron | 25.0% |
| ! | TAATAAACTGATACATGTGA+TGG | - | chr8.3:53528415-53528434 | None:intergenic | 25.0% |
| ! | TAATATTGATCCTTCACTAA+TGG | - | chr8.3:53531158-53531177 | None:intergenic | 25.0% |
| ! | TATAGTCTTTCATTCTCAAT+AGG | - | chr8.3:53529103-53529122 | None:intergenic | 25.0% |
| ! | TATTCCATACAACTCATATA+GGG | - | chr8.3:53526844-53526863 | None:intergenic | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | + | chr8.3:53532107-53532126 | MS.gene59869:CDS | 25.0% |
| ! | TTAAATCAGTGTATGGATTT+GGG | + | chr8.3:53527560-53527579 | MS.gene59869:intron | 25.0% |
| ! | TTAATTACAAAAATCAGGTG+TGG | - | chr8.3:53530876-53530895 | None:intergenic | 25.0% |
| ! | TTAGAAATAATGCATCCTTA+GGG | + | chr8.3:53531768-53531787 | MS.gene59869:intron | 25.0% |
| ! | TTAGCTAAAATTATTACGGA+GGG | + | chr8.3:53529587-53529606 | MS.gene59869:intron | 25.0% |
| ! | TTTAAATCAGTGTATGGATT+TGG | + | chr8.3:53527559-53527578 | MS.gene59869:intron | 25.0% |
| ! | TTTAACAAGACACAAAATCA+AGG | + | chr8.3:53528046-53528065 | MS.gene59869:intron | 25.0% |
| ! | TTTACTAAAATCAGGTGTTA+TGG | - | chr8.3:53527024-53527043 | None:intergenic | 25.0% |
| ! | TTTAGAAATAATGCATCCTT+AGG | + | chr8.3:53531767-53531786 | MS.gene59869:intron | 25.0% |
| ! | TTTGTTTGGATAAGGTTAAT+AGG | + | chr8.3:53527604-53527623 | MS.gene59869:intron | 25.0% |
| !! | ACACCTCTTTTTAATAAATC+AGG | - | chr8.3:53526940-53526959 | None:intergenic | 25.0% |
| !! | ACTTATAAAGACCTGATTTT+TGG | + | chr8.3:53527092-53527111 | MS.gene59869:intron | 25.0% |
| !! | ATTACTTCTGTTATTTGACT+CGG | + | chr8.3:53527700-53527719 | MS.gene59869:intron | 25.0% |
| !! | ATTGGTAATTGATGAATGAT+TGG | + | chr8.3:53530206-53530225 | MS.gene59869:intron | 25.0% |
| !! | GCAATAAGTAGTTTTTATAC+CGG | + | chr8.3:53530988-53531007 | MS.gene59869:intron | 25.0% |
| !! | GTTTTCTTTAAATCAGTGTA+TGG | + | chr8.3:53527553-53527572 | MS.gene59869:intron | 25.0% |
| !! | TAACTCTGAGCATTTTATAT+AGG | - | chr8.3:53530185-53530204 | None:intergenic | 25.0% |
| !! | TGATTTTAAACTATTCTGTG+AGG | + | chr8.3:53531337-53531356 | MS.gene59869:intron | 25.0% |
| !! | TTACTAAAATCAGGTGTTAT+GGG | - | chr8.3:53527023-53527042 | None:intergenic | 25.0% |
| !! | TTGCTGAAGAATTTTATGAA+AGG | + | chr8.3:53529785-53529804 | MS.gene59869:intron | 25.0% |
| !! | TTTCTATTTTCAGTTGAGAT+TGG | + | chr8.3:53528966-53528985 | MS.gene59869:intron | 25.0% |
| !!! | AACTTGTTCACTTTTTGTTT+TGG | - | chr8.3:53531568-53531587 | None:intergenic | 25.0% |
| !!! | AATTTTTTGTTTTAGTGCAG+TGG | + | chr8.3:53531257-53531276 | MS.gene59869:intron | 25.0% |
| !!! | ACAATATTTTGGGTAAATTG+TGG | + | chr8.3:53529901-53529920 | MS.gene59869:intron | 25.0% |
| !!! | ATTTAAGACCTGATTTTTAC+TGG | - | chr8.3:53531064-53531083 | None:intergenic | 25.0% |
| !!! | ATTTTACTAATGAAGAGTAC+AGG | + | chr8.3:53531418-53531437 | MS.gene59869:intron | 25.0% |
| !!! | CTTTTGGGTATTATTTTGTT+TGG | + | chr8.3:53527590-53527609 | MS.gene59869:intron | 25.0% |
| !!! | GATTTTGACTATCTTTATTG+GGG | - | chr8.3:53530357-53530376 | None:intergenic | 25.0% |
| !!! | GGTATTATTTTGTTTGGATA+AGG | + | chr8.3:53527596-53527615 | MS.gene59869:intron | 25.0% |
| !!! | TACTTTTCAAGGCAATAATA+TGG | + | chr8.3:53526477-53526496 | MS.gene59869:intron | 25.0% |
| !!! | TATTTGATTTTTGATCCTTG+TGG | + | chr8.3:53531657-53531676 | MS.gene59869:intron | 25.0% |
| !!! | TTAGGGTTTTATGATTTCTT+TGG | + | chr8.3:53531785-53531804 | MS.gene59869:intron | 25.0% |
| !!! | TTTAAGACCTGATTTTTACT+GGG | - | chr8.3:53531063-53531082 | None:intergenic | 25.0% |
| !!! | TTTTATACCGGTTTTAAAAC+AGG | + | chr8.3:53531000-53531019 | MS.gene59869:intron | 25.0% |
| !!! | TTTTCTAGTGACGAATAAAT+AGG | + | chr8.3:53528814-53528833 | MS.gene59869:intron | 25.0% |
| AAAAAAAAAGGATGAAGAGG+TGG | + | chr8.3:53529253-53529272 | MS.gene59869:intron | 30.0% | |
| AAAGGAACCAAAGATATTGA+TGG | + | chr8.3:53532255-53532274 | MS.gene59869:CDS | 30.0% | |
| AAATGAAGAAAGAGAGACAA+AGG | - | chr8.3:53529865-53529884 | None:intergenic | 30.0% | |
| AACAGAGATAATGTGCTTTA+TGG | + | chr8.3:53531608-53531627 | MS.gene59869:intron | 30.0% | |
| AACCATTGGAACAATACAAA+CGG | - | chr8.3:53529347-53529366 | None:intergenic | 30.0% | |
| AAGATGACCATCAATATCTT+TGG | - | chr8.3:53532265-53532284 | None:intergenic | 30.0% | |
| AAGGAAACAAGAAAGAAAAG+GGG | + | chr8.3:53529052-53529071 | MS.gene59869:intron | 30.0% | |
| AAGTTCAGTGATAAGTTTAC+CGG | - | chr8.3:53526213-53526232 | None:intergenic | 30.0% | |
| AATCAAACAAGATGATGACT+TGG | - | chr8.3:53526422-53526441 | None:intergenic | 30.0% | |
| AATTCCACAGAATCATGAAT+AGG | - | chr8.3:53528005-53528024 | None:intergenic | 30.0% | |
| ACACTTTCATGTATGCATAT+TGG | + | chr8.3:53530716-53530735 | MS.gene59869:intron | 30.0% | |
| ATAAAATTAGAACCCACAAG+TGG | - | chr8.3:53529699-53529718 | None:intergenic | 30.0% | |
| ATATAACCCCAGTAAAAATC+AGG | + | chr8.3:53531053-53531072 | MS.gene59869:intron | 30.0% | |
| ATTCAGTAAATCCTTGTTGA+TGG | + | chr8.3:53529012-53529031 | MS.gene59869:intron | 30.0% | |
| ATTCCATACAACTCATATAG+GGG | - | chr8.3:53526843-53526862 | None:intergenic | 30.0% | |
| CAAAGGAAACAAGAAAGAAA+AGG | + | chr8.3:53529050-53529069 | MS.gene59869:intron | 30.0% | |
| CACTAGTTAAGGATTCAAAA+AGG | + | chr8.3:53531852-53531871 | MS.gene59869:intron | 30.0% | |
| CATTGTATGGATTTATGCTT+AGG | + | chr8.3:53526808-53526827 | MS.gene59869:intron | 30.0% | |
| CGAAAACAACTCTAAATTCA+TGG | + | chr8.3:53527927-53527946 | MS.gene59869:intron | 30.0% | |
| CTATTCCATACAACTCATAT+AGG | - | chr8.3:53526845-53526864 | None:intergenic | 30.0% | |
| GAAATCAATACAACAAATGG+TGG | + | chr8.3:53530312-53530331 | MS.gene59869:intron | 30.0% | |
| GAGGAATAGATGCAAATAAT+GGG | - | chr8.3:53528738-53528757 | None:intergenic | 30.0% | |
| GTAAACTTATCACTGAACTT+GGG | + | chr8.3:53526213-53526232 | MS.gene59869:CDS | 30.0% | |
| GTAAGCTTTCTCATAAAGAA+AGG | + | chr8.3:53527861-53527880 | MS.gene59869:intron | 30.0% | |
| TAAAATGCTCAGAGTTACAT+TGG | + | chr8.3:53530188-53530207 | MS.gene59869:intron | 30.0% | |
| TATAGGACATACTAAATGAG+AGG | - | chr8.3:53529411-53529430 | None:intergenic | 30.0% | |
| TCACTAGAAAATTATGCACT+AGG | - | chr8.3:53528805-53528824 | None:intergenic | 30.0% | |
| TGATTATGAGAAGAACAATG+AGG | + | chr8.3:53532194-53532213 | MS.gene59869:CDS | 30.0% | |
| TGGACCTAAAGAACTTATAA+AGG | + | chr8.3:53526497-53526516 | MS.gene59869:intron | 30.0% | |
| TGTGAAAATGAAGCAATGAA+TGG | + | chr8.3:53528075-53528094 | MS.gene59869:intron | 30.0% | |
| TTCTCTTCTGCATGATATTA+AGG | - | chr8.3:53530295-53530314 | None:intergenic | 30.0% | |
| TTTAAGCTCAATTACATGCA+TGG | - | chr8.3:53529456-53529475 | None:intergenic | 30.0% | |
| TTTCCTAAGGGCAAATATAT+AGG | - | chr8.3:53529428-53529447 | None:intergenic | 30.0% | |
| ! | AGAGGTGTAAAATATGAATG+CGG | + | chr8.3:53526952-53526971 | MS.gene59869:intron | 30.0% |
| ! | ATTTTATTACAAAACGGGTG+TGG | - | chr8.3:53530920-53530939 | None:intergenic | 30.0% |
| ! | CACCCGTTTTGTAATAAAAT+AGG | + | chr8.3:53530920-53530939 | MS.gene59869:intron | 30.0% |
| ! | CAGAAAATAGGTTGAAAAGA+TGG | + | chr8.3:53529220-53529239 | MS.gene59869:intron | 30.0% |
| ! | CATCTCTAGATTCTCTTTTA+CGG | + | chr8.3:53529756-53529775 | MS.gene59869:intron | 30.0% |
| ! | GTTACAAAGTTGATCTCTTA+GGG | + | chr8.3:53531359-53531378 | MS.gene59869:intron | 30.0% |
| ! | TAGTTTGAAGAACTTTTCAC+CGG | - | chr8.3:53526249-53526268 | None:intergenic | 30.0% |
| ! | TTAAGACCTGATTTTTACTG+GGG | - | chr8.3:53531062-53531081 | None:intergenic | 30.0% |
| !! | AAGACCTGATTTTTGGAAAA+AGG | + | chr8.3:53527099-53527118 | MS.gene59869:intron | 30.0% |
| !! | AGACCTGATTTTTGGAAAAA+GGG | + | chr8.3:53527100-53527119 | MS.gene59869:intron | 30.0% |
| !! | GTTTGACTTTTATAACCACA+AGG | - | chr8.3:53531675-53531694 | None:intergenic | 30.0% |
| !!! | TTGTTCACTTTTTGTTTTGG+TGG | - | chr8.3:53531565-53531584 | None:intergenic | 30.0% |
| AAAAAAACTTACGGCAGCAT+AGG | - | chr8.3:53527448-53527467 | None:intergenic | 35.0% | |
| AAAAAACTTACGGCAGCATA+GGG | - | chr8.3:53527447-53527466 | None:intergenic | 35.0% | |
| AAACAAGAAAGAAAAGGGGT+TGG | + | chr8.3:53529056-53529075 | MS.gene59869:intron | 35.0% | |
| AAACACTGGACTTATGTCAT+GGG | + | chr8.3:53526365-53526384 | MS.gene59869:CDS | 35.0% | |
| AACAAGACACAAAATCAAGG+AGG | + | chr8.3:53528049-53528068 | MS.gene59869:intron | 35.0% | |
| AACCGTTTGTATTGTTCCAA+TGG | + | chr8.3:53529342-53529361 | MS.gene59869:intron | 35.0% | |
| AAGATCACTTTCAAGCTGTT+TGG | + | chr8.3:53532084-53532103 | MS.gene59869:CDS | 35.0% | |
| AATGAATGGTGAAGTGAAGA+TGG | + | chr8.3:53528089-53528108 | MS.gene59869:intron | 35.0% | |
| ACCATCTATTGTTATGTCAG+AGG | - | chr8.3:53532013-53532032 | None:intergenic | 35.0% | |
| AGCTTTCTCATAAAGAAAGG+AGG | + | chr8.3:53527864-53527883 | MS.gene59869:intron | 35.0% | |
| ATGAATGGTGAAGTGAAGAT+GGG | + | chr8.3:53528090-53528109 | MS.gene59869:intron | 35.0% | |
| ATGCATGGTAACATTTCCTA+AGG | - | chr8.3:53529441-53529460 | None:intergenic | 35.0% | |
| CATCATACTAAGCTTCATGA+AGG | + | chr8.3:53526314-53526333 | MS.gene59869:CDS | 35.0% | |
| CATGGTACCACTAAATCAAA+AGG | - | chr8.3:53528842-53528861 | None:intergenic | 35.0% | |
| CGGATACAAAATAGGAAGAT+TGG | + | chr8.3:53528173-53528192 | MS.gene59869:intron | 35.0% | |
| CTATCTATACATTCAACCTC+TGG | + | chr8.3:53529961-53529980 | MS.gene59869:intron | 35.0% | |
| CTTTGTATCCAAATACGTGA+AGG | + | chr8.3:53529732-53529751 | MS.gene59869:intron | 35.0% | |
| GAGGAGTAGATAATAACCAT+TGG | + | chr8.3:53528597-53528616 | MS.gene59869:intron | 35.0% | |
| GCAGTGGATAAGTAATTACA+TGG | + | chr8.3:53531273-53531292 | MS.gene59869:intron | 35.0% | |
| GGAGGAATAGATGCAAATAA+TGG | - | chr8.3:53528739-53528758 | None:intergenic | 35.0% | |
| GGTAAACTTATCACTGAACT+TGG | + | chr8.3:53526212-53526231 | MS.gene59869:CDS | 35.0% | |
| GTGAAGAATACCATTAGTGA+AGG | + | chr8.3:53531145-53531164 | MS.gene59869:intron | 35.0% | |
| TAAACACTGGACTTATGTCA+TGG | + | chr8.3:53526364-53526383 | MS.gene59869:CDS | 35.0% | |
| TAACTATTGTGAGAGAAGAG+AGG | + | chr8.3:53528578-53528597 | MS.gene59869:intron | 35.0% | |
| TAATTACATGGCACGTATCT+AGG | + | chr8.3:53531285-53531304 | MS.gene59869:intron | 35.0% | |
| TATGTCAAACATACAACACC+CGG | + | chr8.3:53531028-53531047 | MS.gene59869:intron | 35.0% | |
| TCGGTTTATTCGAGACATAT+TGG | + | chr8.3:53528922-53528941 | MS.gene59869:intron | 35.0% | |
| TGACATAACAATAGATGGTG+TGG | + | chr8.3:53532014-53532033 | MS.gene59869:intron | 35.0% | |
| TGATAGAAAGAGAGAGTTGA+AGG | - | chr8.3:53528714-53528733 | None:intergenic | 35.0% | |
| TGCATGGTAACATTTCCTAA+GGG | - | chr8.3:53529440-53529459 | None:intergenic | 35.0% | |
| TGGATGTTAGAATAGAGTGA+AGG | + | chr8.3:53529981-53530000 | MS.gene59869:intron | 35.0% | |
| TGTCCTATATATTTGCCCTT+AGG | + | chr8.3:53529422-53529441 | MS.gene59869:intron | 35.0% | |
| TGTGTTCAAATGGAACTTTG+TGG | - | chr8.3:53531500-53531519 | None:intergenic | 35.0% | |
| TGTTTATGGTCTCTTTCTGA+TGG | - | chr8.3:53527895-53527914 | None:intergenic | 35.0% | |
| TGTTTCCTTTGAGTAGTTGT+TGG | - | chr8.3:53529041-53529060 | None:intergenic | 35.0% | |
| TTAAGGTTAAAACGTGGTTG+AGG | - | chr8.3:53527423-53527442 | None:intergenic | 35.0% | |
| TTAGAGGCAAATGTGTAATC+TGG | + | chr8.3:53528865-53528884 | MS.gene59869:intron | 35.0% | |
| TTCTCAAAACCAGATAGCTT+TGG | - | chr8.3:53527679-53527698 | None:intergenic | 35.0% | |
| TTGAGTATACCAAAGCTATC+TGG | + | chr8.3:53527667-53527686 | MS.gene59869:intron | 35.0% | |
| ! | AATTCAAGTTCGAGTTCAAG+TGG | + | chr8.3:53531208-53531227 | MS.gene59869:intron | 35.0% |
| ! | ACACCCTTTTTCCAAAAATC+AGG | - | chr8.3:53527106-53527125 | None:intergenic | 35.0% |
| ! | AGTTTGAAGAACTTTTCACC+GGG | - | chr8.3:53526248-53526267 | None:intergenic | 35.0% |
| ! | ATTGATGGTCATCTTGTCAA+GGG | + | chr8.3:53532270-53532289 | MS.gene59869:CDS | 35.0% |
| ! | GAGAAGCACATAATAACCAT+TGG | - | chr8.3:53529361-53529380 | None:intergenic | 35.0% |
| ! | GGTTACAAAGTTGATCTCTT+AGG | + | chr8.3:53531358-53531377 | MS.gene59869:intron | 35.0% |
| ! | TAGGGTTTAAGGTTAAAACG+TGG | - | chr8.3:53527429-53527448 | None:intergenic | 35.0% |
| ! | TATCTTTGGTTCCTTTGCTA+AGG | - | chr8.3:53532251-53532270 | None:intergenic | 35.0% |
| ! | TATTGATGGTCATCTTGTCA+AGG | + | chr8.3:53532269-53532288 | MS.gene59869:CDS | 35.0% |
| ! | TTTTACTGGGGTTATATCAC+CGG | - | chr8.3:53531050-53531069 | None:intergenic | 35.0% |
| !! | CATCTTAGAAGTGCTTAACA+AGG | + | chr8.3:53532140-53532159 | MS.gene59869:CDS | 35.0% |
| !! | GATTTGGGACTTTTGCTTTT+GGG | + | chr8.3:53527575-53527594 | MS.gene59869:intron | 35.0% |
| !! | GGATAACAGAGGCATTATAA+TGG | + | chr8.3:53528132-53528151 | MS.gene59869:intron | 35.0% |
| !! | GTTGTATGGAATAGTTCTAG+TGG | + | chr8.3:53526851-53526870 | MS.gene59869:intron | 35.0% |
| !! | TGCTACTTTAGTGCATTGTA+TGG | + | chr8.3:53526795-53526814 | MS.gene59869:intron | 35.0% |
| !! | TTGCTCTGTTTCTAGAAAGA+GGG | - | chr8.3:53527220-53527239 | None:intergenic | 35.0% |
| !!! | ATAGGTGCCTTTTGATTTAG+TGG | + | chr8.3:53528832-53528851 | MS.gene59869:intron | 35.0% |
| !!! | TACCACACCTGTTTTAAAAC+CGG | - | chr8.3:53531010-53531029 | None:intergenic | 35.0% |
| !!! | TCTAATTGCTGGCTTTTACA+GGG | + | chr8.3:53530079-53530098 | MS.gene59869:intron | 35.0% |
| !!! | TGTTTTGGTGGCAATTGTTT+AGG | - | chr8.3:53531553-53531572 | None:intergenic | 35.0% |
| !!! | TTCTAATTGCTGGCTTTTAC+AGG | + | chr8.3:53530078-53530097 | MS.gene59869:intron | 35.0% |
| AATCCTTAACTAGTGCCCTA+AGG | - | chr8.3:53531847-53531866 | None:intergenic | 40.0% | |
| AGAGATGTCCTTCACGTATT+TGG | - | chr8.3:53529743-53529762 | None:intergenic | 40.0% | |
| AGCTTCATGAAGGAGAAGAT+TGG | + | chr8.3:53526324-53526343 | MS.gene59869:CDS | 40.0% | |
| AGTTCAAGTGGATGATTGAG+GGG | + | chr8.3:53531220-53531239 | MS.gene59869:intron | 40.0% | |
| ATAAGACGACTGGATAACAG+AGG | + | chr8.3:53528121-53528140 | MS.gene59869:intron | 40.0% | |
| ATATTCCGAGCAACTCATGT+GGG | + | chr8.3:53531184-53531203 | MS.gene59869:intron | 40.0% | |
| ATCACTTTCAAGCTGTTTGG+TGG | + | chr8.3:53532087-53532106 | MS.gene59869:CDS | 40.0% | |
| ATGGAACTTTGTGGTCGTAA+TGG | - | chr8.3:53531491-53531510 | None:intergenic | 40.0% | |
| ATGGAAGTTCTGCTGTTAGA+TGG | + | chr8.3:53532166-53532185 | MS.gene59869:CDS | 40.0% | |
| ATGGTCGTTCAACTGAAACA+AGG | + | chr8.3:53528233-53528252 | MS.gene59869:intron | 40.0% | |
| ATGTTGATACTCCAAATGGC+TGG | + | chr8.3:53532217-53532236 | MS.gene59869:CDS | 40.0% | |
| CACATTTGCCTCTAATCACA+TGG | - | chr8.3:53528860-53528879 | None:intergenic | 40.0% | |
| CACTCTATTCTAACATCCAG+AGG | - | chr8.3:53529980-53529999 | None:intergenic | 40.0% | |
| CAGAAGGTTTCACTGATAAC+TGG | - | chr8.3:53530509-53530528 | None:intergenic | 40.0% | |
| CCACAGAATCATGAATAGGA+AGG | - | chr8.3:53528001-53528020 | None:intergenic | 40.0% | |
| CCTTCCTATTCATGATTCTG+TGG | + | chr8.3:53527998-53528017 | MS.gene59869:intron | 40.0% | |
| GAACCCACAAGTGGTAAATA+CGG | - | chr8.3:53529690-53529709 | None:intergenic | 40.0% | |
| GAGGATGTTGATACTCCAAA+TGG | + | chr8.3:53532213-53532232 | MS.gene59869:CDS | 40.0% | |
| GAGTTCAAGTGGATGATTGA+GGG | + | chr8.3:53531219-53531238 | MS.gene59869:intron | 40.0% | |
| GATCCCCTATATGAGTTGTA+TGG | + | chr8.3:53526837-53526856 | MS.gene59869:intron | 40.0% | |
| GATTAGAGACAAAAGGGACT+CGG | + | chr8.3:53528903-53528922 | MS.gene59869:intron | 40.0% | |
| GCCTCTGACATAACAATAGA+TGG | + | chr8.3:53532009-53532028 | MS.gene59869:intron | 40.0% | |
| GGTTTCCAACAACTACTCAA+AGG | + | chr8.3:53529033-53529052 | MS.gene59869:intron | 40.0% | |
| GTTCCGTATTTACCACTTGT+GGG | + | chr8.3:53529684-53529703 | MS.gene59869:intron | 40.0% | |
| GTTGTTGGAAACCATCAACA+AGG | - | chr8.3:53529026-53529045 | None:intergenic | 40.0% | |
| TACGCTAACAAGTGTCCTTA+GGG | + | chr8.3:53531829-53531848 | MS.gene59869:intron | 40.0% | |
| TAGTGGTACCATGTGATTAG+AGG | + | chr8.3:53528849-53528868 | MS.gene59869:intron | 40.0% | |
| TGAGAGGACGGATACAAAAT+AGG | + | chr8.3:53528165-53528184 | MS.gene59869:intron | 40.0% | |
| TGGCACGTATCTAGGTAAAA+CGG | + | chr8.3:53531293-53531312 | MS.gene59869:intron | 40.0% | |
| TGTTCCGTATTTACCACTTG+TGG | + | chr8.3:53529683-53529702 | MS.gene59869:intron | 40.0% | |
| TTAAGCTCTTGTGGCTTATC+TGG | + | chr8.3:53530122-53530141 | MS.gene59869:intron | 40.0% | |
| TTACAAAACGGGTGTGGAAA+TGG | - | chr8.3:53530914-53530933 | None:intergenic | 40.0% | |
| TTACGCTAACAAGTGTCCTT+AGG | + | chr8.3:53531828-53531847 | MS.gene59869:intron | 40.0% | |
| TTTACTGGGGTTATATCACC+GGG | - | chr8.3:53531049-53531068 | None:intergenic | 40.0% | |
| TTTGAGAGATACACTAGTGC+AGG | + | chr8.3:53526887-53526906 | MS.gene59869:intron | 40.0% | |
| ! | AACGGTTTGTGTTGATCCAA+TGG | - | chr8.3:53528616-53528635 | None:intergenic | 40.0% |
| ! | AGATTGGCATCACACTGATT+CGG | + | chr8.3:53526340-53526359 | MS.gene59869:CDS | 40.0% |
| ! | ATCTGTTGCCAGTCTCATTT+TGG | - | chr8.3:53528520-53528539 | None:intergenic | 40.0% |
| ! | TCATGTTTTCAGTCTTCACG+TGG | - | chr8.3:53529564-53529583 | None:intergenic | 40.0% |
| ! | TCTGTTGCCAGTCTCATTTT+GGG | - | chr8.3:53528519-53528538 | None:intergenic | 40.0% |
| ! | TTGATGGTCATCTTGTCAAG+GGG | + | chr8.3:53532271-53532290 | MS.gene59869:CDS | 40.0% |
| !! | AAAAGGGGTTGGTTTGTGAT+TGG | + | chr8.3:53529067-53529086 | MS.gene59869:intron | 40.0% |
| !! | AAAGGGGTTGGTTTGTGATT+GGG | + | chr8.3:53529068-53529087 | MS.gene59869:intron | 40.0% |
| !! | ACACTGATTCGGTTAAACAC+TGG | + | chr8.3:53526351-53526370 | MS.gene59869:CDS | 40.0% |
| !! | GGATTTGGGACTTTTGCTTT+TGG | + | chr8.3:53527574-53527593 | MS.gene59869:intron | 40.0% |
| !! | GTTGCTCTGTTTCTAGAAAG+AGG | - | chr8.3:53527221-53527240 | None:intergenic | 40.0% |
| !! | TTAGAGTTGTTTTCGCTTGC+AGG | - | chr8.3:53527922-53527941 | None:intergenic | 40.0% |
| !!! | TACCGGTTTTAAAACAGGTG+TGG | + | chr8.3:53531005-53531024 | MS.gene59869:intron | 40.0% |
| !!! | TTTTTTTCCATGTGTCACGC+AGG | + | chr8.3:53527143-53527162 | MS.gene59869:intron | 40.0% |
| AATCGAGAGTGAGAGTGAGA+AGG | - | chr8.3:53527366-53527385 | None:intergenic | 45.0% | |
| AATGGTGAAGTGAAGATGGG+AGG | + | chr8.3:53528093-53528112 | MS.gene59869:intron | 45.0% | |
| AATTCCCCACATGAGTTGCT+CGG | - | chr8.3:53531192-53531211 | None:intergenic | 45.0% | |
| CATATTCCGAGCAACTCATG+TGG | + | chr8.3:53531183-53531202 | MS.gene59869:intron | 45.0% | |
| CGAGTTCAAGTGGATGATTG+AGG | + | chr8.3:53531218-53531237 | MS.gene59869:intron | 45.0% | |
| CGCATGGGTGAGAAAATGTA+GGG | - | chr8.3:53528674-53528693 | None:intergenic | 45.0% | |
| GAACTTGGGATCAAAACACC+CGG | + | chr8.3:53526227-53526246 | MS.gene59869:CDS | 45.0% | |
| GTAAGCACCCAAAATGAGAC+TGG | + | chr8.3:53528509-53528528 | MS.gene59869:intron | 45.0% | |
| GTCCAATAGACTGCACATGA+TGG | - | chr8.3:53530260-53530279 | None:intergenic | 45.0% | |
| GTCCATCATGTGCAGTCTAT+TGG | + | chr8.3:53530255-53530274 | MS.gene59869:intron | 45.0% | |
| TAAAACGTGGTTGAGGCAAG+AGG | - | chr8.3:53527416-53527435 | None:intergenic | 45.0% | |
| TAAGCAACCACTTTCTCGCA+TGG | + | chr8.3:53528214-53528233 | MS.gene59869:intron | 45.0% | |
| TAATGGAGACAGAACGTGAG+AGG | + | chr8.3:53528149-53528168 | MS.gene59869:intron | 45.0% | |
| TATTCCGAGCAACTCATGTG+GGG | + | chr8.3:53531185-53531204 | MS.gene59869:intron | 45.0% | |
| TCATCTTGTCAAGGGGGAAA+AGG | + | chr8.3:53532278-53532297 | MS.gene59869:CDS | 45.0% | |
| TCGTTTCATTAGCAGCGCAT+GGG | - | chr8.3:53528689-53528708 | None:intergenic | 45.0% | |
| TGATACTCCAAATGGCTGGA+TGG | + | chr8.3:53532221-53532240 | MS.gene59869:CDS | 45.0% | |
| TGATGGTCATCTTGTCAAGG+GGG | + | chr8.3:53532272-53532291 | MS.gene59869:CDS | 45.0% | |
| TGTGGAGTGGTATAGCCTAT+TGG | + | chr8.3:53530787-53530806 | MS.gene59869:intron | 45.0% | |
| TTACGGCAGCATAGGGTTTA+AGG | - | chr8.3:53527440-53527459 | None:intergenic | 45.0% | |
| ! | ATTGAGGGGTAGTCTTGACT+CGG | + | chr8.3:53531234-53531253 | MS.gene59869:intron | 45.0% |
| ! | GAAGTGCTTAACAAGGCTGA+TGG | + | chr8.3:53532147-53532166 | MS.gene59869:CDS | 45.0% |
| ! | TGTCCTTAGGGCACTAGTTA+AGG | + | chr8.3:53531841-53531860 | MS.gene59869:intron | 45.0% |
| !! | AGACTGCACATGATGGACAA+GGG | - | chr8.3:53530253-53530272 | None:intergenic | 45.0% |
| !! | TAGACTGCACATGATGGACA+AGG | - | chr8.3:53530254-53530273 | None:intergenic | 45.0% |
| !! | TGGATGGACTACCTTAGCAA+AGG | + | chr8.3:53532237-53532256 | MS.gene59869:CDS | 45.0% |
| !! | TATAAAAAAAAAAAAACTTA+CGG | - | chr8.3:53527457-53527476 | None:intergenic | 5.0% |
| !!! | ATTTTAAAAAATTCAATATT+TGG | - | chr8.3:53528346-53528365 | None:intergenic | 5.0% |
| AGGTAGTCCATCCAGCCATT+TGG | - | chr8.3:53532231-53532250 | None:intergenic | 50.0% | |
| AGTCATGCGTGAGAGAGACA+AGG | - | chr8.3:53528760-53528779 | None:intergenic | 50.0% | |
| CAACTGAAACAAGGCGACAG+AGG | + | chr8.3:53528242-53528261 | MS.gene59869:intron | 50.0% | |
| CGCTTGCAGGAGTCTGTTTA+TGG | - | chr8.3:53527909-53527928 | None:intergenic | 50.0% | |
| CGTTGGAGGTTAAGCTCTTG+TGG | + | chr8.3:53530113-53530132 | MS.gene59869:intron | 50.0% | |
| CGTTTCCTGCACCTTAACCA+TGG | + | chr8.3:53527387-53527406 | MS.gene59869:intron | 50.0% | |
| GCAAGAGGACTCCATGGTTA+AGG | - | chr8.3:53527401-53527420 | None:intergenic | 50.0% | |
| GCGCATGGGTGAGAAAATGT+AGG | - | chr8.3:53528675-53528694 | None:intergenic | 50.0% | |
| GGAGGAAGGAATAAGACGAC+TGG | + | chr8.3:53528111-53528130 | MS.gene59869:intron | 50.0% | |
| GGTGCACACATGCAATGAGA+GGG | + | chr8.3:53532035-53532054 | MS.gene59869:CDS | 50.0% | |
| GTCGTTTCATTAGCAGCGCA+TGG | - | chr8.3:53528690-53528709 | None:intergenic | 50.0% | |
| GTGAAGTGAAGATGGGAGGA+AGG | + | chr8.3:53528097-53528116 | MS.gene59869:intron | 50.0% | |
| TGAACGACCATGCGAGAAAG+TGG | - | chr8.3:53528224-53528243 | None:intergenic | 50.0% | |
| TGGTGCACACATGCAATGAG+AGG | + | chr8.3:53532034-53532053 | MS.gene59869:CDS | 50.0% | |
| TTCCATGTGTCACGCAGGAT+CGG | + | chr8.3:53527148-53527167 | MS.gene59869:intron | 50.0% | |
| !! | ATAGCCTATTGGCTTGCCTG+TGG | + | chr8.3:53530798-53530817 | MS.gene59869:intron | 50.0% |
| !! | TAGCCTATTGGCTTGCCTGT+GGG | + | chr8.3:53530799-53530818 | MS.gene59869:intron | 50.0% |
| !!! | TTGCTGGCTTTTACAGGGTC+AGG | + | chr8.3:53530084-53530103 | MS.gene59869:intron | 50.0% |
| AACCGATCCTGCGTGACACA+TGG | - | chr8.3:53527153-53527172 | None:intergenic | 55.0% | |
| ACAGGGTCAGGATGTTGCGT+TGG | + | chr8.3:53530096-53530115 | MS.gene59869:intron | 55.0% | |
| AGATCAGCGTGCGTGAACCA+TGG | - | chr8.3:53527280-53527299 | None:intergenic | 55.0% | |
| CATGCGTGAGAGAGACAAGG+AGG | - | chr8.3:53528757-53528776 | None:intergenic | 55.0% | |
| GGACTCCATGGTTAAGGTGC+AGG | - | chr8.3:53527395-53527414 | None:intergenic | 55.0% | |
| GGAGACAGAACGTGAGAGGA+CGG | + | chr8.3:53528153-53528172 | MS.gene59869:intron | 55.0% | |
| GTTGAGGCAAGAGGACTCCA+TGG | - | chr8.3:53527407-53527426 | None:intergenic | 55.0% | |
| TCACCCACAGGCAAGCCAAT+AGG | - | chr8.3:53530805-53530824 | None:intergenic | 55.0% | |
| ! | GTGGAAAACGAGAAGCGCGT+GGG | + | chr8.3:53529272-53529291 | MS.gene59869:intron | 55.0% |
| AGGCGCAGGAAACGAGATCG+AGG | - | chr8.3:53527254-53527273 | None:intergenic | 60.0% | |
| CGTTTCCTGCGCCTCAACCA+TGG | + | chr8.3:53527260-53527279 | MS.gene59869:intron | 60.0% | |
| GCAGGAAACGAGATCGAGGG+TGG | - | chr8.3:53527250-53527269 | None:intergenic | 60.0% | |
| GCGTGCGTGAACCATGGTTG+AGG | - | chr8.3:53527274-53527293 | None:intergenic | 60.0% | |
| GGCGCAGGAAACGAGATCGA+GGG | - | chr8.3:53527253-53527272 | None:intergenic | 60.0% | |
| GGGTCAGGATGTTGCGTTGG+AGG | + | chr8.3:53530099-53530118 | MS.gene59869:intron | 60.0% | |
| GTGAACCATGGTTGAGGCGC+AGG | - | chr8.3:53527268-53527287 | None:intergenic | 60.0% | |
| ! | GGTGGAAAACGAGAAGCGCG+TGG | + | chr8.3:53529271-53529290 | MS.gene59869:intron | 60.0% |
| ! | GGAGGCACGCTTTCACCCAC+AGG | - | chr8.3:53530817-53530836 | None:intergenic | 65.0% |
| ! | GTGGGTGAAAGCGTGCCTCC+AGG | + | chr8.3:53530817-53530836 | MS.gene59869:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 53526200 | 53532311 | 53526200 | ID=MS.gene59869 |
| chr8.3 | mRNA | 53526200 | 53532311 | 53526200 | ID=MS.gene59869.t1;Parent=MS.gene59869 |
| chr8.3 | exon | 53526200 | 53526386 | 53526200 | ID=MS.gene59869.t1.exon1;Parent=MS.gene59869.t1 |
| chr8.3 | CDS | 53526200 | 53526386 | 53526200 | ID=cds.MS.gene59869.t1;Parent=MS.gene59869.t1 |
| chr8.3 | exon | 53532028 | 53532311 | 53532028 | ID=MS.gene59869.t1.exon2;Parent=MS.gene59869.t1 |
| chr8.3 | CDS | 53532028 | 53532311 | 53532028 | ID=cds.MS.gene59869.t1;Parent=MS.gene59869.t1 |
| Gene Sequence |
| Protein sequence |
