AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49203


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49203.t1 MTR_5g072860 90.066 453 45 0 12 464 18 470 0.0 851
MS.gene49203.t1 MTR_5g075440 54.267 457 203 3 7 461 5 457 0.0 515
MS.gene49203.t1 MTR_3g031450 52.564 468 198 8 1 462 5 454 7.88e-167 479
MS.gene49203.t1 MTR_3g031400 53.004 466 194 8 2 462 7 452 1.63e-166 478
MS.gene49203.t1 MTR_5g072810 49.890 453 215 6 10 459 10 453 8.57e-155 447
MS.gene49203.t1 MTR_5g072840 48.132 455 215 8 12 460 10 449 1.53e-146 426
MS.gene49203.t1 MTR_5g072820 47.807 456 213 8 12 459 10 448 2.16e-145 423
MS.gene49203.t1 MTR_5g072830 46.930 456 217 8 12 459 10 448 2.18e-143 418
MS.gene49203.t1 MTR_5g072850 46.288 458 166 8 5 460 3 382 7.88e-134 391
MS.gene49203.t1 MTR_6g014040 31.762 488 278 18 12 460 10 481 2.39e-60 205
MS.gene49203.t1 MTR_6g038220 30.342 468 281 12 12 459 11 453 3.50e-59 201
MS.gene49203.t1 MTR_3g008010 31.056 483 285 16 12 460 10 478 2.23e-58 199
MS.gene49203.t1 MTR_6g014270 31.568 491 276 17 12 460 7 479 5.84e-58 199
MS.gene49203.t1 MTR_7g011470 32.359 479 272 16 12 460 10 466 8.46e-58 198
MS.gene49203.t1 MTR_6g013440 30.879 489 280 16 12 460 11 481 1.56e-57 197
MS.gene49203.t1 MTR_6g014200 32.238 487 276 18 12 460 7 477 2.50e-57 197
MS.gene49203.t1 MTR_8g059425 30.435 483 288 16 12 460 10 478 2.70e-57 197
MS.gene49203.t1 MTR_3g079480 30.849 483 288 15 12 461 21 490 3.45e-57 197
MS.gene49203.t1 MTR_6g038240 29.851 469 285 14 12 460 11 455 3.84e-57 196
MS.gene49203.t1 MTR_6g014290 30.533 488 281 16 12 460 10 478 6.22e-57 196
MS.gene49203.t1 MTR_3g479520 30.165 484 290 15 12 461 15 484 1.86e-56 195
MS.gene49203.t1 MTR_2g008210 29.792 480 293 15 12 460 11 477 2.48e-56 194
MS.gene49203.t1 MTR_5g035580 30.621 467 273 16 12 456 13 450 3.80e-56 193
MS.gene49203.t1 MTR_6g038230 29.677 465 291 14 11 459 10 454 4.94e-56 193
MS.gene49203.t1 MTR_6g011340 32.121 495 266 19 12 460 10 480 5.27e-56 193
MS.gene49203.t1 MTR_8g088560 30.064 469 286 15 12 459 10 457 5.56e-56 192
MS.gene49203.t1 MTR_6g013900 31.568 491 273 20 12 460 10 479 8.59e-56 193
MS.gene49203.t1 MTR_6g014020 31.352 488 279 18 12 460 10 480 1.13e-55 192
MS.gene49203.t1 MTR_0288s0020 29.857 489 266 16 12 460 10 461 1.76e-55 191
MS.gene49203.t1 MTR_7g011470 32.008 478 271 17 12 460 10 462 1.93e-55 191
MS.gene49203.t1 MTR_6g013920 31.967 488 275 19 12 460 10 479 3.09e-55 191
MS.gene49203.t1 MTR_6g014250 29.218 486 290 16 12 460 10 478 3.25e-55 191
MS.gene49203.t1 MTR_6g014187 28.893 488 291 14 12 460 10 480 6.87e-55 191
MS.gene49203.t1 MTR_3g479490 29.876 482 292 15 12 460 6 474 8.37e-55 190
MS.gene49203.t1 MTR_3g069710 28.510 463 293 10 13 460 13 452 9.79e-55 189
MS.gene49203.t1 MTR_6g013450 30.285 492 286 16 9 460 7 481 1.09e-54 190
MS.gene49203.t1 MTR_6g013960 29.243 489 288 16 12 460 10 480 1.16e-54 190
MS.gene49203.t1 MTR_6g038200 29.122 467 293 13 10 459 9 454 1.69e-54 189
MS.gene49203.t1 MTR_6g014310 29.448 489 287 14 12 460 11 481 2.29e-54 189
MS.gene49203.t1 MTR_6g014220 29.363 487 288 15 12 460 10 478 2.36e-54 189
MS.gene49203.t1 MTR_7g080950 28.450 471 289 15 12 461 6 449 3.82e-54 188
MS.gene49203.t1 MTR_7g080940 29.851 469 285 15 12 461 11 454 4.10e-54 187
MS.gene49203.t1 MTR_8g083290 29.412 476 292 14 13 460 5 464 6.52e-54 187
MS.gene49203.t1 MTR_6g014150 31.417 487 280 17 12 460 7 477 1.90e-53 186
MS.gene49203.t1 MTR_6g014050 31.493 489 277 18 12 460 11 481 2.22e-53 186
MS.gene49203.t1 MTR_4g094220 30.400 500 279 18 1 456 1 475 4.69e-53 186
MS.gene49203.t1 MTR_6g038300 29.247 465 292 13 12 459 11 455 5.36e-53 185
MS.gene49203.t1 MTR_5g058320 30.165 484 281 17 9 460 7 465 8.49e-53 184
MS.gene49203.t1 MTR_6g014300 29.959 484 275 17 12 460 12 466 1.02e-52 184
MS.gene49203.t1 MTR_6g014170 29.691 485 273 16 12 460 10 462 2.11e-52 183
MS.gene49203.t1 MTR_8g083280 29.876 482 277 13 13 460 8 462 2.39e-52 183
MS.gene49203.t1 MTR_6g013990 30.247 486 285 17 12 460 10 478 3.12e-52 183
MS.gene49203.t1 MTR_0036s0220 29.400 483 291 18 12 460 12 478 5.64e-52 182
MS.gene49203.t1 MTR_5g464810 29.339 484 292 18 11 460 11 478 1.93e-50 178
MS.gene49203.t1 MTR_5g064240 29.339 484 292 18 11 460 11 478 1.93e-50 178
MS.gene49203.t1 MTR_5g035560 29.299 471 290 15 12 464 11 456 2.55e-50 179
MS.gene49203.t1 MTR_6g014240 29.228 479 271 15 12 460 7 447 2.64e-50 177
MS.gene49203.t1 MTR_1g107380 27.607 489 292 15 9 460 10 473 3.19e-50 178
MS.gene49203.t1 MTR_5g464760 28.986 483 295 17 12 460 12 480 1.29e-49 176
MS.gene49203.t1 MTR_7g080935 29.892 465 292 14 11 461 10 454 1.93e-49 175
MS.gene49203.t1 MTR_3g069690 27.468 466 300 9 11 460 7 450 5.21e-49 174
MS.gene49203.t1 MTR_3g479470 29.132 484 294 16 12 461 13 481 3.87e-48 172
MS.gene49203.t1 MTR_7g080900 28.059 474 311 14 1 461 1 457 5.14e-48 171
MS.gene49203.t1 MTR_7g102460 28.016 489 306 13 9 460 6 485 6.19e-48 172
MS.gene49203.t1 MTR_7g102490 27.711 498 298 15 9 460 6 487 6.48e-48 172
MS.gene49203.t1 MTR_5g031840 28.390 472 303 14 10 459 3 461 2.26e-47 170
MS.gene49203.t1 MTR_4g064987 29.873 472 277 15 13 460 9 450 2.49e-47 169
MS.gene49203.t1 MTR_3g084520 28.485 495 279 17 12 459 6 472 2.61e-47 170
MS.gene49203.t1 MTR_5g016480 26.598 485 301 15 13 462 9 473 3.07e-47 170
MS.gene49203.t1 MTR_4g094920 26.809 470 314 11 9 460 23 480 2.21e-46 168
MS.gene49203.t1 MTR_7g013240 28.105 459 288 13 12 456 6 436 4.91e-46 166
MS.gene49203.t1 MTR_5g098930 26.600 500 282 14 12 461 5 469 1.17e-45 165
MS.gene49203.t1 MTR_0184s0040 29.140 477 282 13 6 448 15 469 1.26e-45 166
MS.gene49203.t1 MTR_0078s0190 29.140 477 282 13 6 448 15 469 1.26e-45 166
MS.gene49203.t1 MTR_4g064987 29.661 472 272 16 13 460 9 444 3.68e-45 163
MS.gene49203.t1 MTR_1g107375 28.326 466 300 15 10 459 6 453 3.93e-45 164
MS.gene49203.t1 MTR_3g084530 27.975 479 302 16 12 459 6 472 7.88e-45 163
MS.gene49203.t1 MTR_8g064870 27.651 481 305 13 13 464 12 478 1.01e-44 163
MS.gene49203.t1 MTR_3g049970 27.664 488 286 16 12 459 9 469 1.31e-44 162
MS.gene49203.t1 MTR_7g070610 29.289 478 290 17 12 452 13 479 1.82e-44 162
MS.gene49203.t1 MTR_4g485630 28.689 488 285 20 12 459 9 473 1.86e-44 162
MS.gene49203.t1 MTR_7g013260 28.632 468 275 15 12 456 6 437 2.30e-44 161
MS.gene49203.t1 MTR_4g024020 27.711 498 299 17 9 460 6 488 2.32e-44 162
MS.gene49203.t1 MTR_8g043470 29.782 413 223 12 66 460 15 378 2.33e-44 160
MS.gene49203.t1 MTR_8g066610 27.992 493 280 17 12 456 9 474 2.73e-44 162
MS.gene49203.t1 MTR_1g107350 26.360 478 305 13 12 459 8 468 2.82e-44 162
MS.gene49203.t1 MTR_1g062380 28.094 509 278 17 12 461 16 495 4.98e-44 161
MS.gene49203.t1 MTR_8g009050 27.215 474 296 14 10 452 4 459 7.77e-44 160
MS.gene49203.t1 MTR_7g013180 28.416 461 281 15 12 450 5 438 1.21e-43 159
MS.gene49203.t1 MTR_8g077590 30.753 478 265 17 9 448 6 455 1.47e-43 159
MS.gene49203.t1 MTR_1g107360 27.160 486 283 13 12 459 9 461 3.74e-43 159
MS.gene49203.t1 MTR_3g084540 27.651 481 302 17 12 459 6 473 4.47e-43 158
MS.gene49203.t1 MTR_0078s0010 28.302 477 287 14 10 452 4 459 4.82e-43 158
MS.gene49203.t1 MTR_4g095008 26.471 476 302 16 12 460 11 465 5.68e-43 159
MS.gene49203.t1 MTR_1g029540 28.178 472 279 18 17 459 19 459 5.85e-43 158
MS.gene49203.t1 MTR_8g009073 28.448 464 291 12 10 447 4 452 7.70e-43 157
MS.gene49203.t1 MTR_7g117170 29.046 482 291 15 2 452 7 468 7.86e-43 158
MS.gene49203.t1 MTR_7g013200 27.412 456 296 12 12 456 5 436 9.02e-43 157
MS.gene49203.t1 MTR_7g055710 27.521 476 300 14 12 452 11 476 1.22e-42 157
MS.gene49203.t1 MTR_8g027885 28.302 477 275 16 13 452 19 465 2.77e-42 156
MS.gene49203.t1 MTR_1g107365 27.061 473 294 14 12 459 45 491 3.02e-42 157
MS.gene49203.t1 MTR_5g031860 28.361 476 295 16 12 459 12 469 4.06e-42 155
MS.gene49203.t1 MTR_7g070660 26.899 487 299 15 12 459 11 479 4.33e-42 156
MS.gene49203.t1 MTR_1g107315 26.514 479 305 13 11 459 7 468 4.63e-42 156
MS.gene49203.t1 MTR_8g009055 27.754 472 296 13 10 452 4 459 6.18e-42 155
MS.gene49203.t1 MTR_5g031830 28.629 496 291 16 1 459 1 470 6.26e-42 155
MS.gene49203.t1 MTR_3g479610 31.833 311 182 8 170 461 15 314 7.61e-42 151
MS.gene49203.t1 MTR_8g009063 27.083 480 295 13 10 455 11 469 7.93e-42 155
MS.gene49203.t1 MTR_8g064880 29.675 492 287 16 12 464 9 480 8.20e-42 155
MS.gene49203.t1 MTR_8g465670 26.611 481 299 11 11 456 6 467 9.56e-42 155
MS.gene49203.t1 MTR_4g008630 28.392 479 280 17 13 459 15 462 9.84e-42 154
MS.gene49203.t1 MTR_7g070800 27.743 483 287 16 12 452 6 468 1.93e-41 154
MS.gene49203.t1 MTR_7g117405 25.956 497 293 16 12 460 12 481 2.21e-41 154
MS.gene49203.t1 MTR_8g027870 28.958 480 268 17 13 452 19 465 2.78e-41 154
MS.gene49203.t1 MTR_1g019510 27.848 474 296 14 10 455 4 459 2.85e-41 153
MS.gene49203.t1 MTR_7g070940 27.101 476 301 13 12 456 9 469 5.61e-41 153
MS.gene49203.t1 MTR_7g102560 25.904 498 306 15 9 461 6 485 1.05e-40 152
MS.gene49203.t1 MTR_3g009510 27.291 491 283 15 11 452 4 469 1.25e-40 152
MS.gene49203.t1 MTR_2g040530 27.615 478 296 16 13 459 6 464 1.43e-40 151
MS.gene49203.t1 MTR_7g071040 26.305 479 303 13 12 452 17 483 1.69e-40 152
MS.gene49203.t1 MTR_5g045970 26.523 509 285 15 12 461 16 494 1.89e-40 152
MS.gene49203.t1 MTR_8g008990 27.463 477 293 14 10 452 4 461 2.00e-40 151
MS.gene49203.t1 MTR_8g006730 27.935 494 286 17 11 463 5 469 2.03e-40 151
MS.gene49203.t1 MTR_7g070860 28.294 463 296 13 12 452 7 455 2.34e-40 151
MS.gene49203.t1 MTR_1g107285 28.333 480 286 15 13 459 9 463 2.87e-40 150
MS.gene49203.t1 MTR_5g070090 29.387 473 289 21 11 459 10 461 4.00e-40 150
MS.gene49203.t1 MTR_7g047030 28.723 470 286 15 10 448 4 455 4.26e-40 150
MS.gene49203.t1 MTR_7g047270 28.723 470 286 15 10 448 4 455 4.26e-40 150
MS.gene49203.t1 MTR_7g013220 29.221 462 280 14 12 450 5 442 4.61e-40 150
MS.gene49203.t1 MTR_7g070780 27.459 488 299 16 12 459 11 483 1.07e-39 149
MS.gene49203.t1 MTR_7g046490 33.981 309 151 11 176 452 169 456 2.62e-39 148
MS.gene49203.t1 MTR_4g031800 26.694 487 296 16 13 461 10 473 1.32e-38 146
MS.gene49203.t1 MTR_0184s0030 27.754 472 289 13 10 448 4 456 1.36e-38 146
MS.gene49203.t1 MTR_8g008970 27.932 469 297 12 10 452 4 457 1.38e-38 149
MS.gene49203.t1 MTR_8g008970 31.128 257 159 6 204 452 535 781 2.69e-27 115
MS.gene49203.t1 MTR_7g102550 25.615 488 306 15 12 456 9 482 3.66e-38 145
MS.gene49203.t1 MTR_4g485620 28.643 398 246 13 88 461 76 459 3.98e-38 144
MS.gene49203.t1 MTR_1g032490 27.158 475 313 14 8 459 6 470 5.42e-38 144
MS.gene49203.t1 MTR_8g009067 27.004 474 303 12 10 456 4 461 6.09e-38 144
MS.gene49203.t1 MTR_8g012650 28.486 502 276 19 11 460 5 475 6.12e-38 144
MS.gene49203.t1 MTR_8g012635 28.974 497 269 19 10 455 4 467 7.18e-38 144
MS.gene49203.t1 MTR_5g045960 24.649 499 305 11 12 460 9 486 8.23e-38 144
MS.gene49203.t1 MTR_7g070910 26.778 478 302 13 12 452 11 477 1.09e-37 144
MS.gene49203.t1 MTR_6g005600 27.642 492 262 17 11 448 5 456 1.15e-37 144
MS.gene49203.t1 MTR_6g014190 32.095 296 162 9 193 460 3 287 1.25e-37 139
MS.gene49203.t1 MTR_8g006710 27.551 490 288 20 13 463 7 468 1.46e-37 143
MS.gene49203.t1 MTR_7g102450 25.105 478 315 11 12 461 11 473 2.06e-37 143
MS.gene49203.t1 MTR_0891s0010 32.075 265 157 6 212 461 35 291 3.32e-37 138
MS.gene49203.t1 MTR_8g012745 28.099 484 287 15 10 455 4 464 5.14e-37 142
MS.gene49203.t1 MTR_8g009067 31.148 305 174 8 176 456 51 343 9.98e-37 138
MS.gene49203.t1 MTR_8g009073 32.203 295 166 7 176 447 40 323 1.34e-36 137
MS.gene49203.t1 MTR_0078s0060 27.859 481 274 17 10 447 4 454 1.42e-36 140
MS.gene49203.t1 MTR_8g006220 25.510 490 302 11 11 456 5 475 1.83e-36 140
MS.gene49203.t1 MTR_4g117960 25.988 481 304 16 16 459 15 480 1.95e-36 140
MS.gene49203.t1 MTR_6g033725 25.577 477 297 14 13 455 5 457 2.40e-36 140
MS.gene49203.t1 MTR_7g102520 25.963 493 306 16 12 460 12 489 3.39e-36 140
MS.gene49203.t1 MTR_7g070810 26.132 486 302 14 12 459 9 475 4.65e-36 139
MS.gene49203.t1 MTR_8g074550 27.767 497 282 17 11 452 7 481 5.41e-36 139
MS.gene49203.t1 MTR_6g023665 26.667 480 293 14 11 455 12 467 6.92e-36 139
MS.gene49203.t1 MTR_0536s0020 25.926 486 290 17 16 459 22 479 2.86e-35 137
MS.gene49203.t1 MTR_4g108250 26.042 480 306 14 12 452 11 480 3.32e-35 137
MS.gene49203.t1 MTR_7g070740 26.096 479 303 15 12 452 11 476 4.37e-35 137
MS.gene49203.t1 MTR_6g033625 25.263 475 290 14 13 448 5 453 6.99e-35 135
MS.gene49203.t1 MTR_0536s0010 26.804 485 281 19 16 459 25 476 7.75e-35 136
MS.gene49203.t1 MTR_6g488280 25.514 486 291 16 11 455 5 460 8.04e-35 135
MS.gene49203.t1 MTR_0428s0010 25.514 486 291 16 11 455 5 460 8.04e-35 135
MS.gene49203.t1 MTR_4g117950 25.562 489 287 16 16 461 10 464 8.91e-35 135
MS.gene49203.t1 MTR_5g090670 26.052 499 297 16 11 461 4 478 9.83e-35 135
MS.gene49203.t1 MTR_5g016660 26.423 492 292 14 9 452 7 476 1.31e-34 135
MS.gene49203.t1 MTR_5g090660 25.352 497 293 15 11 460 4 469 1.39e-34 136
MS.gene49203.t1 MTR_8g466240 26.737 475 292 15 9 456 5 450 1.48e-34 134
MS.gene49203.t1 MTR_5g090580 24.800 500 300 13 11 461 4 476 1.70e-34 135
MS.gene49203.t1 MTR_2g059240 25.255 491 297 17 9 460 10 469 1.70e-34 134
MS.gene49203.t1 MTR_8g012730 37.668 223 107 7 251 447 80 296 2.65e-34 130
MS.gene49203.t1 MTR_2g046820 25.157 477 303 14 12 456 5 459 3.17e-34 134
MS.gene49203.t1 MTR_5g070040 27.389 471 284 14 11 448 10 455 3.33e-34 134
MS.gene49203.t1 MTR_2g046750 25.051 491 295 15 12 459 5 465 4.14e-34 133
MS.gene49203.t1 MTR_7g070930 26.096 479 304 11 12 452 14 480 4.94e-34 134
MS.gene49203.t1 MTR_5g090700 23.935 493 315 12 11 461 4 478 5.99e-34 133
MS.gene49203.t1 MTR_5g090600 26.096 479 299 14 11 461 4 455 6.14e-34 133
MS.gene49203.t1 MTR_5g090620 24.950 497 304 15 11 461 4 477 6.43e-34 133
MS.gene49203.t1 MTR_0477s0010 28.451 355 191 9 126 460 6 317 6.93e-34 130
MS.gene49203.t1 MTR_5g087620 25.394 508 299 17 12 461 10 495 8.72e-34 133
MS.gene49203.t1 MTR_8g032950 25.259 483 310 14 13 459 13 480 9.50e-34 133
MS.gene49203.t1 MTR_6g033660 25.311 482 290 12 13 453 5 457 9.96e-34 132
MS.gene49203.t1 MTR_8g007585 34.975 203 115 4 267 460 198 392 1.03e-33 131
MS.gene49203.t1 MTR_8g090095 25.420 476 296 14 17 459 30 479 2.23e-33 132
MS.gene49203.t1 MTR_5g090630 25.605 496 290 15 11 460 4 466 2.73e-33 131
MS.gene49203.t1 MTR_6g013680 28.471 425 213 17 66 460 12 375 3.34e-33 129
MS.gene49203.t1 MTR_6g033675 25.514 486 289 14 13 455 5 460 6.43e-33 130
MS.gene49203.t1 MTR_5g019580 25.813 492 287 17 12 452 7 471 1.72e-32 129
MS.gene49203.t1 MTR_4g118000 25.572 481 291 17 16 459 16 466 2.27e-32 129
MS.gene49203.t1 MTR_8g044140 31.022 274 155 7 211 456 178 445 5.79e-32 127
MS.gene49203.t1 MTR_6g014186 26.025 488 267 18 12 460 7 439 7.16e-32 127
MS.gene49203.t1 MTR_8g012630 35.681 213 106 6 269 455 204 411 8.55e-32 126
MS.gene49203.t1 MTR_8g068330 25.223 448 297 14 12 434 8 442 9.30e-32 127
MS.gene49203.t1 MTR_2g035040 28.312 385 231 11 113 465 23 394 9.53e-32 125
MS.gene49203.t1 MTR_5g098960 26.168 428 281 14 13 419 8 421 2.74e-31 125
MS.gene49203.t1 MTR_6g035295 25.210 476 309 14 13 452 13 477 2.83e-31 126
MS.gene49203.t1 MTR_2g035020 31.618 272 158 7 212 456 208 478 3.50e-31 125
MS.gene49203.t1 MTR_8g071070 25.979 485 295 16 11 456 6 465 3.82e-31 125
MS.gene49203.t1 MTR_6g033615 25.427 468 284 14 13 448 5 439 5.91e-31 124
MS.gene49203.t1 MTR_8g006270 29.333 375 209 13 115 456 109 460 6.28e-31 124
MS.gene49203.t1 MTR_8g006260 27.937 383 221 12 105 455 103 462 8.73e-31 124
MS.gene49203.t1 MTR_6g014160 28.235 340 189 11 66 378 47 358 1.15e-30 122
MS.gene49203.t1 MTR_8g007650 25.714 455 287 15 10 433 5 439 1.47e-30 123
MS.gene49203.t1 MTR_5g090610 24.736 473 294 12 11 448 4 449 2.33e-30 123
MS.gene49203.t1 MTR_1g019520 32.243 214 113 5 267 455 2 208 5.66e-30 116
MS.gene49203.t1 MTR_5g019580 25.155 485 271 16 12 452 59 495 6.61e-30 122
MS.gene49203.t1 MTR_4g485640 31.250 288 157 10 195 456 391 663 6.72e-30 123
MS.gene49203.t1 MTR_8g007565 25.330 454 290 14 10 433 5 439 6.73e-30 122
MS.gene49203.t1 MTR_4g117980 32.035 231 127 6 253 459 257 481 1.40e-29 121
MS.gene49203.t1 MTR_6g035185 25.600 500 284 18 16 459 15 482 1.70e-29 120
MS.gene49203.t1 MTR_5g067170 25.156 481 301 16 16 456 15 476 3.43e-29 120
MS.gene49203.t1 MTR_4g117890 24.217 479 301 15 16 456 17 471 4.84e-29 119
MS.gene49203.t1 MTR_7g012120 33.632 223 123 5 254 452 255 476 5.17e-29 119
MS.gene49203.t1 MTR_5g027210 24.359 468 287 12 10 426 2 453 9.20e-29 119
MS.gene49203.t1 MTR_5g029800 24.948 477 311 16 16 459 15 477 1.04e-28 118
MS.gene49203.t1 MTR_4g082810 35.714 224 108 11 199 398 196 407 2.01e-28 116
MS.gene49203.t1 MTR_5g039900 29.851 268 144 7 217 452 221 476 3.97e-28 117
MS.gene49203.t1 MTR_7g071050 26.940 464 256 17 12 444 13 424 4.95e-28 115
MS.gene49203.t1 MTR_1g040310 30.515 272 156 9 211 456 216 480 5.24e-28 116
MS.gene49203.t1 MTR_4g128720 22.526 475 301 13 12 456 15 452 6.27e-28 115
MS.gene49203.t1 MTR_2g098430 24.746 493 299 20 13 456 7 476 7.14e-28 116
MS.gene49203.t1 MTR_4g082820 24.793 484 299 19 10 456 5 460 8.01e-28 115
MS.gene49203.t1 MTR_2g008225 25.275 455 292 16 12 440 15 447 1.10e-27 115
MS.gene49203.t1 MTR_2g034990 24.587 484 302 16 16 456 15 478 1.43e-27 115
MS.gene49203.t1 MTR_0009s0240 24.948 477 300 18 11 456 6 455 1.55e-27 115
MS.gene49203.t1 MTR_6g078320 24.638 483 307 16 10 453 9 473 2.21e-27 114
MS.gene49203.t1 MTR_6g035265 30.275 218 126 3 267 459 257 473 2.25e-27 114
MS.gene49203.t1 MTR_7g067120 23.810 441 287 15 8 437 5 407 7.56e-27 112
MS.gene49203.t1 MTR_2086s0010 32.044 181 105 3 291 461 1 173 7.86e-27 106
MS.gene49203.t1 MTR_1996s0010 32.044 181 105 3 291 461 1 173 7.86e-27 106
MS.gene49203.t1 MTR_7g039550 29.057 265 144 7 220 452 2 254 1.97e-26 108
MS.gene49203.t1 MTR_5g066410 23.767 446 280 14 16 433 2 415 2.01e-26 111
MS.gene49203.t1 MTR_4g485590 25.058 431 251 12 10 410 7 395 2.31e-26 110
MS.gene49203.t1 MTR_5g072825 50.515 97 40 3 8 102 4 94 3.79e-26 102
MS.gene49203.t1 MTR_2g008220 24.837 459 289 17 12 440 14 446 1.28e-25 109
MS.gene49203.t1 MTR_5g004940 33.333 204 104 6 267 459 195 377 1.28e-25 108
MS.gene49203.t1 MTR_8g068360 24.654 434 275 17 12 414 12 424 1.85e-25 108
MS.gene49203.t1 MTR_5g040030 23.887 494 294 15 13 452 15 480 1.86e-25 109
MS.gene49203.t1 MTR_7g070870 25.000 416 244 15 8 385 15 400 5.32e-25 107
MS.gene49203.t1 MTR_4g123553 23.230 452 300 15 12 440 15 442 9.69e-25 107
MS.gene49203.t1 MTR_7g067330 24.161 447 278 16 8 437 5 407 2.19e-24 105
MS.gene49203.t1 MTR_7g080960 31.696 224 104 4 242 461 294 472 2.57e-24 105
MS.gene49203.t1 MTR_4g128690 23.861 461 293 18 12 448 15 441 5.34e-24 104
MS.gene49203.t1 MTR_5g066390 32.500 160 91 4 310 460 64 215 5.68e-23 97.1
MS.gene49203.t1 MTR_8g009840 32.870 216 109 9 266 452 310 518 6.60e-23 102
MS.gene49203.t1 MTR_2g046620 23.593 462 286 18 12 440 16 443 1.11e-22 100
MS.gene49203.t1 MTR_8g068340 23.928 443 274 16 12 417 12 428 1.35e-22 100
MS.gene49203.t1 MTR_7g470610 29.018 224 136 5 210 410 69 292 2.10e-22 97.4
MS.gene49203.t1 MTR_7g070583 29.018 224 136 5 210 410 69 292 2.10e-22 97.4
MS.gene49203.t1 MTR_1g090270 23.678 435 288 12 12 423 15 428 3.35e-22 99.4
MS.gene49203.t1 MTR_6g036650 23.480 477 317 17 12 461 18 473 1.01e-21 97.8
MS.gene49203.t1 MTR_6g042310 24.222 450 302 17 10 440 16 445 1.02e-21 97.8
MS.gene49203.t1 MTR_2g008226 23.593 462 292 19 12 436 10 447 2.11e-21 97.1
MS.gene49203.t1 MTR_6g014185 28.626 262 139 10 210 460 121 345 7.17e-21 94.4
MS.gene49203.t1 MTR_3g009490 32.022 178 94 5 295 448 3 177 1.57e-20 89.7
MS.gene49203.t1 MTR_1g107325 28.365 208 122 3 260 459 164 352 1.60e-20 93.2
MS.gene49203.t1 MTR_4g077960 22.676 441 296 15 22 440 2 419 2.18e-20 93.6
MS.gene49203.t1 MTR_7g070995 35.075 134 78 3 327 452 5 137 2.43e-20 88.2
MS.gene49203.t1 MTR_6g014000 34.884 129 76 3 327 455 31 151 2.17e-18 87.8
MS.gene49203.t1 MTR_6g013435 23.513 353 207 11 123 460 3 307 2.30e-18 85.9
MS.gene49203.t1 MTR_7g070760 29.798 198 101 4 211 394 28 201 4.59e-18 83.2
MS.gene49203.t1 MTR_8g056740 28.571 217 142 4 216 423 114 326 7.68e-18 85.5
MS.gene49203.t1 MTR_0536s0030 31.447 159 91 5 317 459 195 351 1.16e-17 84.7
MS.gene49203.t1 MTR_3g435310 30.726 179 112 5 270 440 227 401 1.40e-17 85.1
MS.gene49203.t1 MTR_4g059370 26.426 333 207 12 111 423 41 355 2.30e-17 84.0
MS.gene49203.t1 MTR_2g083490 22.718 471 285 17 8 437 4 436 1.32e-16 82.4
MS.gene49203.t1 MTR_2g083380 22.811 491 281 18 8 445 21 466 1.81e-15 79.0
MS.gene49203.t1 MTR_5g090690 26.633 199 103 4 240 417 166 342 2.76e-15 77.8
MS.gene49203.t1 MTR_4g079270 23.849 239 162 4 210 437 207 436 3.79e-15 77.8
MS.gene49203.t1 MTR_0078s0200 25.868 317 209 8 10 315 4 305 1.19e-14 75.1
MS.gene49203.t1 MTR_4g079250 21.460 452 306 14 12 437 8 436 4.51e-14 74.3
MS.gene49203.t1 MTR_2g014900 21.198 434 290 16 12 418 7 415 6.19e-14 73.9
MS.gene49203.t1 MTR_3g479620 32.500 160 97 6 12 162 6 163 7.72e-13 67.0
MS.gene49203.t1 MTR_8g006230 30.732 205 126 7 115 316 55 246 1.45e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49203.t1 AT2G30150 50.756 463 213 9 1 459 1 452 3.19e-157 453
MS.gene49203.t1 AT2G30150 50.783 447 206 8 16 459 1 436 1.82e-153 443
MS.gene49203.t1 AT2G30140 50.108 463 210 9 4 459 3 451 2.45e-150 436
MS.gene49203.t1 AT2G30140 50.108 463 209 9 4 459 3 450 5.78e-150 435
MS.gene49203.t1 AT2G36970 28.778 483 287 12 12 459 10 470 3.38e-64 215
MS.gene49203.t1 AT2G28080 29.638 469 288 11 16 460 22 472 4.27e-63 212
MS.gene49203.t1 AT2G31750 31.224 474 279 14 11 461 7 456 5.00e-62 209
MS.gene49203.t1 AT2G31750 31.027 477 282 14 11 464 7 459 1.30e-61 208
MS.gene49203.t1 AT1G05680 30.769 468 279 13 11 456 5 449 5.12e-61 206
MS.gene49203.t1 AT1G05675 29.032 465 291 10 11 456 5 449 5.94e-61 206
MS.gene49203.t1 AT1G22360 29.835 486 291 17 12 462 10 480 2.09e-55 192
MS.gene49203.t1 AT2G43840 29.916 478 267 14 12 459 7 446 6.66e-55 189
MS.gene49203.t1 AT2G43840 30.213 470 276 14 12 459 7 446 1.08e-54 189
MS.gene49203.t1 AT1G22400 27.778 486 306 13 12 464 13 486 1.89e-54 189
MS.gene49203.t1 AT1G22380 28.974 497 287 15 12 465 13 486 3.56e-54 189
MS.gene49203.t1 AT5G38040 29.590 463 272 13 20 459 18 449 9.50e-54 186
MS.gene49203.t1 AT1G78270 29.132 484 293 17 12 460 13 481 1.29e-53 187
MS.gene49203.t1 AT3G46660 27.957 465 297 11 8 456 10 452 2.80e-53 186
MS.gene49203.t1 AT4G01070 28.571 476 286 14 10 452 6 460 1.25e-52 184
MS.gene49203.t1 AT4G15480 26.349 482 317 11 6 462 13 481 2.93e-52 184
MS.gene49203.t1 AT1G24100 28.601 479 290 13 7 459 6 458 8.08e-52 182
MS.gene49203.t1 AT1G22340 27.766 479 307 13 12 460 13 482 8.26e-52 182
MS.gene49203.t1 AT3G46670 28.387 465 293 12 8 456 5 445 1.06e-51 181
MS.gene49203.t1 AT2G31790 29.122 467 290 15 12 457 8 454 1.09e-51 181
MS.gene49203.t1 AT2G43820 29.701 468 281 15 12 459 7 446 1.17e-51 181
MS.gene49203.t1 AT5G38010 27.837 467 295 10 12 459 10 453 1.70e-50 178
MS.gene49203.t1 AT5G05900 31.263 467 277 14 13 461 9 449 1.96e-50 178
MS.gene49203.t1 AT3G21560 28.056 499 302 17 1 465 1 476 2.66e-50 178
MS.gene49203.t1 AT1G22360 28.395 486 286 16 12 462 10 468 8.29e-50 176
MS.gene49203.t1 AT1G01420 28.661 478 282 14 10 452 6 459 1.07e-49 176
MS.gene49203.t1 AT1G01420 28.661 478 282 14 10 452 9 462 1.19e-49 176
MS.gene49203.t1 AT5G59580 26.724 464 299 11 12 459 9 447 1.64e-49 175
MS.gene49203.t1 AT4G15490 27.673 477 310 13 7 460 3 467 7.28e-49 174
MS.gene49203.t1 AT2G36750 28.049 492 310 14 9 465 7 489 1.91e-48 173
MS.gene49203.t1 AT3G11340 29.550 467 279 15 13 460 10 445 2.55e-48 172
MS.gene49203.t1 AT5G59590 26.824 466 299 11 11 459 9 449 5.30e-48 171
MS.gene49203.t1 AT2G36800 29.058 499 292 16 12 465 12 493 3.37e-47 170
MS.gene49203.t1 AT4G15500 28.000 475 296 13 12 460 9 463 3.59e-47 169
MS.gene49203.t1 AT1G10400 28.333 480 294 19 11 463 6 462 9.65e-47 168
MS.gene49203.t1 AT3G46680 27.742 465 289 15 12 456 9 446 2.15e-45 164
MS.gene49203.t1 AT2G26480 27.371 464 295 11 13 462 9 444 2.49e-45 164
MS.gene49203.t1 AT2G23250 28.384 458 280 14 21 459 7 435 2.95e-45 164
MS.gene49203.t1 AT1G05560 27.088 491 277 17 8 459 3 451 3.53e-45 164
MS.gene49203.t1 AT3G02100 29.718 461 291 15 12 456 13 456 4.70e-45 164
MS.gene49203.t1 AT1G22370 28.454 485 294 17 12 462 13 478 7.86e-45 163
MS.gene49203.t1 AT5G05880 29.175 473 278 14 12 459 8 448 1.20e-44 162
MS.gene49203.t1 AT1G05560 27.088 491 277 17 8 459 53 501 1.23e-44 164
MS.gene49203.t1 AT1G01390 28.838 482 285 13 10 456 6 464 6.07e-44 161
MS.gene49203.t1 AT1G01390 28.838 482 285 13 10 456 23 481 9.69e-44 160
MS.gene49203.t1 AT2G36780 26.358 497 305 17 9 461 11 490 1.20e-43 160
MS.gene49203.t1 AT4G15550 27.686 484 293 15 8 456 9 470 1.42e-43 160
MS.gene49203.t1 AT2G23260 27.549 461 306 14 11 459 9 453 1.54e-43 159
MS.gene49203.t1 AT5G05870 29.025 472 286 11 12 459 8 454 6.01e-43 158
MS.gene49203.t1 AT3G53160 27.309 498 293 20 12 461 8 484 1.75e-42 157
MS.gene49203.t1 AT4G15280 25.755 497 297 12 12 461 4 475 1.96e-42 157
MS.gene49203.t1 AT4G15280 25.755 497 297 12 12 461 36 507 2.78e-42 157
MS.gene49203.t1 AT3G46650 26.419 458 282 12 13 455 11 428 2.89e-42 155
MS.gene49203.t1 AT2G36790 28.313 498 307 15 2 461 4 489 3.37e-42 156
MS.gene49203.t1 AT2G16890 28.866 485 282 20 12 459 9 467 6.23e-42 155
MS.gene49203.t1 AT5G05890 28.814 472 285 13 12 459 8 452 1.61e-41 154
MS.gene49203.t1 AT5G14860 28.287 502 284 21 12 465 8 481 1.70e-41 154
MS.gene49203.t1 AT3G21790 25.458 491 307 13 12 459 4 478 1.95e-41 154
MS.gene49203.t1 AT3G46720 29.194 459 279 15 13 456 10 437 2.34e-41 153
MS.gene49203.t1 AT3G46700 25.272 459 309 11 12 459 9 444 7.43e-41 152
MS.gene49203.t1 AT2G36770 25.301 498 315 14 9 464 11 493 9.12e-41 152
MS.gene49203.t1 AT3G21800 26.122 490 299 13 13 459 6 475 1.15e-40 152
MS.gene49203.t1 AT3G46690 26.696 457 296 12 12 452 9 442 1.86e-40 151
MS.gene49203.t1 AT2G15480 26.008 496 298 19 12 456 10 487 3.83e-40 150
MS.gene49203.t1 AT3G21750 25.103 486 309 13 11 460 3 469 4.40e-40 150
MS.gene49203.t1 AT5G05860 28.266 467 290 13 12 460 9 448 5.58e-40 149
MS.gene49203.t1 AT3G55700 26.327 471 296 13 13 460 9 451 6.33e-40 149
MS.gene49203.t1 AT5G03490 28.390 472 281 17 5 450 14 454 1.11e-39 149
MS.gene49203.t1 AT2G36760 26.122 490 315 15 9 461 11 490 1.21e-39 149
MS.gene49203.t1 AT3G21780 25.996 477 312 12 12 459 4 468 1.68e-39 149
MS.gene49203.t1 AT2G15480 26.337 486 299 19 12 456 10 477 2.43e-39 148
MS.gene49203.t1 AT1G05530 24.948 477 304 11 12 460 5 455 2.75e-39 147
MS.gene49203.t1 AT2G29740 27.235 481 305 14 11 459 7 474 4.47e-39 147
MS.gene49203.t1 AT2G15490 27.027 481 302 18 12 456 7 474 7.49e-39 147
MS.gene49203.t1 AT3G53150 25.000 500 315 12 12 461 22 511 8.16e-39 147
MS.gene49203.t1 AT2G29730 32.955 264 160 6 212 465 211 467 9.88e-39 146
MS.gene49203.t1 AT2G18570 28.423 482 277 15 12 452 5 459 1.44e-38 146
MS.gene49203.t1 AT2G29750 27.439 492 295 18 11 462 7 476 2.51e-38 145
MS.gene49203.t1 AT2G15490 26.915 483 303 17 12 456 7 477 4.50e-38 145
MS.gene49203.t1 AT3G21760 25.255 491 310 12 12 459 4 480 5.41e-38 145
MS.gene49203.t1 AT2G16890 29.545 440 250 18 12 415 9 424 1.43e-37 142
MS.gene49203.t1 AT4G34131 26.285 506 283 18 7 456 5 476 1.71e-37 143
MS.gene49203.t1 AT1G07250 34.572 269 153 7 208 461 214 474 1.91e-37 143
MS.gene49203.t1 AT5G26310 25.988 481 289 18 12 452 7 460 1.93e-37 143
MS.gene49203.t1 AT5G17050 24.116 481 322 12 1 461 1 458 1.40e-36 140
MS.gene49203.t1 AT2G29710 25.208 480 309 14 11 460 4 463 9.50e-36 138
MS.gene49203.t1 AT3G55710 25.586 469 306 14 13 460 9 455 1.40e-35 137
MS.gene49203.t1 AT1G07260 28.455 369 226 9 115 462 123 474 2.75e-34 134
MS.gene49203.t1 AT4G14090 27.097 465 294 18 12 456 13 452 2.77e-34 134
MS.gene49203.t1 AT4G34138 25.780 481 291 14 12 449 11 468 6.96e-34 133
MS.gene49203.t1 AT4G36770 26.793 474 273 17 12 442 4 446 8.67e-34 132
MS.gene49203.t1 AT5G17030 24.375 480 321 15 1 461 1 457 1.71e-33 132
MS.gene49203.t1 AT3G50740 25.100 498 278 16 12 452 7 466 4.42e-33 131
MS.gene49203.t1 AT4G15260 28.881 277 161 6 211 461 90 356 7.49e-33 128
MS.gene49203.t1 AT2G18560 29.337 392 217 14 96 452 3 369 8.17e-33 128
MS.gene49203.t1 AT5G66690 25.996 477 281 17 12 446 7 453 5.76e-32 127
MS.gene49203.t1 AT1G73880 24.948 481 316 14 5 460 7 467 2.72e-31 125
MS.gene49203.t1 AT5G65550 23.529 459 299 14 7 436 4 439 5.16e-31 125
MS.gene49203.t1 AT1G07240 31.227 269 160 7 210 460 215 476 1.20e-30 124
MS.gene49203.t1 AT5G17040 23.769 467 309 11 11 460 4 440 1.45e-30 123
MS.gene49203.t1 AT5G12890 27.309 498 288 22 8 456 6 478 7.86e-30 122
MS.gene49203.t1 AT4G34135 26.273 491 293 17 12 456 11 478 9.89e-30 121
MS.gene49203.t1 AT5G37950 26.911 327 215 8 58 369 26 343 1.35e-29 119
MS.gene49203.t1 AT5G17040 29.297 256 165 5 210 460 94 338 5.76e-28 114
MS.gene49203.t1 AT1G51210 25.275 455 288 17 4 434 6 432 1.82e-27 114
MS.gene49203.t1 AT5G37950 26.300 327 211 8 58 369 26 337 3.27e-27 112
MS.gene49203.t1 AT3G16520 31.179 263 153 9 210 456 206 456 6.23e-27 113
MS.gene49203.t1 AT1G30530 24.411 467 318 15 7 460 7 451 6.53e-27 113
MS.gene49203.t1 AT5G49690 25.561 446 290 16 12 437 10 433 6.79e-27 113
MS.gene49203.t1 AT4G01070 28.750 320 200 10 10 318 6 308 2.74e-26 109
MS.gene49203.t1 AT1G22370 28.707 317 186 10 170 462 8 308 3.02e-26 108
MS.gene49203.t1 AT3G16520 31.148 244 143 8 210 437 206 440 4.67e-25 107
MS.gene49203.t1 AT3G16520 31.148 244 143 8 210 437 206 440 5.42e-25 107
MS.gene49203.t1 AT3G22250 23.904 456 286 15 13 431 9 440 1.37e-23 103
MS.gene49203.t1 AT2G22590 22.149 456 303 17 12 437 15 448 4.94e-21 95.9
MS.gene49203.t1 AT1G06000 22.774 483 279 19 12 459 10 433 5.86e-21 95.5
MS.gene49203.t1 AT3G29630 21.609 435 284 15 12 415 6 414 1.13e-14 76.3
MS.gene49203.t1 AT1G64910 21.018 452 303 14 10 440 4 422 2.95e-14 75.1
MS.gene49203.t1 AT5G53990 19.731 446 312 12 12 440 6 422 1.15e-13 73.2
MS.gene49203.t1 AT5G54060 22.069 435 301 12 13 418 14 439 8.16e-13 70.9
MS.gene49203.t1 AT4G34135 24.629 337 200 13 12 315 11 326 8.77e-13 69.7
MS.gene49203.t1 AT5G54010 21.149 435 304 15 12 430 6 417 1.41e-12 69.7
MS.gene49203.t1 AT4G27570 20.920 435 289 16 12 415 7 417 9.09e-12 67.4
MS.gene49203.t1 AT4G27560 20.690 435 290 14 12 415 7 417 3.08e-11 65.9

Find 114 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACATGATAGTTATTTGTTT+TGG 0.190342 5.4:-61360401 MS.gene49203:CDS
TAGGCTTGTTAGAAGATTTA+TGG 0.205219 5.4:-61359091 MS.gene49203:CDS
AATAATATGAAAGCCTTTCT+TGG 0.246704 5.4:-61358973 MS.gene49203:CDS
AAAGGTTGGTCCATCATTAT+TGG 0.266008 5.4:+61359207 None:intergenic
TGAAGCTGTTGCTACTAAAA+TGG 0.273399 5.4:-61360478 MS.gene49203:CDS
GTGGTGGGTGGAGGAGGATT+TGG 0.277697 5.4:+61360738 None:intergenic
GTTAGAAGATTTATGGATTT+GGG 0.281168 5.4:-61359084 MS.gene49203:CDS
CATCGTGAAGTTGAAAATCT+TGG 0.286582 5.4:+61359769 None:intergenic
TGTTAGAAGATTTATGGATT+TGG 0.300533 5.4:-61359085 MS.gene49203:CDS
GTAGGTCCAATTGTGTAAAT+TGG 0.309840 5.4:+61359606 None:intergenic
TATAATCATGTTTAACATCT+TGG 0.318063 5.4:+61359538 None:intergenic
GAAAGATATTTGTGGGGATA+AGG 0.325851 5.4:-61359358 MS.gene49203:CDS
TCTATACCAATTTACACAAT+TGG 0.329382 5.4:-61359612 MS.gene49203:CDS
ATCTTTGCCTCGACCTTCTT+CGG 0.344761 5.4:+61360515 None:intergenic
AACTAACCTGAAGCATTTAC+TGG 0.357766 5.4:+61360264 None:intergenic
TTGAGGCTCAAGTTCATATA+TGG 0.359393 5.4:+61359662 None:intergenic
AAACGTGTGGATTACATTCC+GGG 0.361089 5.4:-61359810 MS.gene49203:CDS
TCTTCGGAGGGAACTACGTT+TGG 0.361946 5.4:+61360531 None:intergenic
ATAGTTGAGGATTGGAAAGT+TGG 0.365038 5.4:-61359171 MS.gene49203:CDS
GATTACCCAGTAAATGCTTC+AGG 0.373708 5.4:-61360270 MS.gene49203:intron
CAAACGTGTGGATTACATTC+CGG 0.374925 5.4:-61359811 MS.gene49203:CDS
ATGTTCATGTTGCGTCGTTT+TGG 0.385300 5.4:-61360353 MS.gene49203:CDS
CTTTGGCCGTGACTAAAATA+AGG 0.387209 5.4:+61359579 None:intergenic
AAAGATATTTGTGGGGATAA+GGG 0.388826 5.4:-61359357 MS.gene49203:CDS
TATGAAAATGTTGAGGTTGT+TGG 0.398570 5.4:+61360641 None:intergenic
TGGCTAGATAATCAACCCTT+TGG 0.405021 5.4:-61359510 MS.gene49203:CDS
CTCCATTTGCAACTGCACTT+TGG 0.421432 5.4:+61359007 None:intergenic
AGCTTGCATAGGTTCATCAT+TGG 0.421746 5.4:+61360672 None:intergenic
TCTTACCTCTCCAATAATGA+TGG 0.427830 5.4:-61359217 MS.gene49203:CDS
TAGTTGAGGATTGGAAAGTT+GGG 0.447378 5.4:-61359170 MS.gene49203:CDS
GTGGGTGGAGGAGGATTTGG+AGG 0.452077 5.4:+61360741 None:intergenic
AGAAGAAACGACGCCGACAT+AGG 0.455999 5.4:+61360330 None:intergenic
GGGTTGATGTGGCCTCGACC+TGG 0.457192 5.4:+61360693 None:intergenic
AGTTGGGTGGAGAGTGGAGA+CGG 0.457769 5.4:-61359154 MS.gene49203:CDS
AACGTAGTTCCCTCCGAAGA+AGG 0.458701 5.4:-61360528 MS.gene49203:CDS
CCATTCTTCTGTGACTATGA+AGG 0.462954 5.4:+61360617 None:intergenic
CTAAGTGGAAAGATATTTGT+GGG 0.463305 5.4:-61359365 MS.gene49203:CDS
GCTTGCATAGGTTCATCATT+GGG 0.465865 5.4:+61360673 None:intergenic
TTTCTTGGTAATATATTACA+TGG 0.470876 5.4:-61358958 MS.gene49203:CDS
TGCCAAAGTGCAGTTGCAAA+TGG 0.473909 5.4:-61359009 MS.gene49203:CDS
ATGTAATATATTACCAAGAA+AGG 0.476400 5.4:+61358960 None:intergenic
TATGCATCAACACTCTCAAT+TGG 0.478373 5.4:+61359313 None:intergenic
AAGATATTTGTGGGGATAAG+GGG 0.481885 5.4:-61359356 MS.gene49203:CDS
ACGTGAGTGGTGGGTGGAGG+AGG 0.483465 5.4:+61360732 None:intergenic
TTGTAGGGTCGGAGTTGATG+AGG 0.485403 5.4:+61360589 None:intergenic
TTGGAAAGTTGGGTGGAGAG+TGG 0.485928 5.4:-61359160 MS.gene49203:CDS
TTACAAGAGTTGCGAATAAG+AGG 0.487308 5.4:-61360377 MS.gene49203:CDS
ATCATGTTTAACATCTTGGT+TGG 0.495001 5.4:+61359542 None:intergenic
TGTAGGGTCGGAGTTGATGA+GGG 0.497360 5.4:+61360590 None:intergenic
GAATCAAGTAGTTTCTCAAA+TGG 0.498000 5.4:+61360450 None:intergenic
ACTACGTGAGTGGTGGGTGG+AGG 0.499536 5.4:+61360729 None:intergenic
GTAAGTATATAGTTGAGGAT+TGG 0.500681 5.4:-61359179 MS.gene49203:CDS
AGGAGGATTTGGAGGTTCCA+TGG 0.502238 5.4:+61360749 None:intergenic
ATTATTGGAGAGGTAAGAAA+AGG 0.507093 5.4:+61359222 None:intergenic
TATTGTGCTTTCTTCATCCA+TGG 0.508332 5.4:+61359699 None:intergenic
ACTATATACTTACTATTCAA+AGG 0.508938 5.4:+61359189 None:intergenic
CTATCATGTATAATCACATT+CGG 0.512101 5.4:+61360414 None:intergenic
GAGCTAATTCTAACAATCTA+CGG 0.512987 5.4:+61359733 None:intergenic
TCTAAGTGGAAAGATATTTG+TGG 0.514263 5.4:-61359366 MS.gene49203:CDS
AGACGAATTGATGTGTTCCC+CGG 0.515037 5.4:+61359792 None:intergenic
TATACTTACTATTCAAAGGT+TGG 0.524591 5.4:+61359193 None:intergenic
CTTAAAACATCAATTGCTTG+AGG 0.525457 5.4:+61359645 None:intergenic
GTGTTGATGCATAGTGCTAT+AGG 0.529886 5.4:-61359303 MS.gene49203:CDS
CCTTCATAGTCACAGAAGAA+TGG 0.530348 5.4:-61360617 MS.gene49203:CDS
ATGTGGCCTCGACCTGGGTA+TGG 0.530456 5.4:+61360699 None:intergenic
TTAAACATGATTATATAACT+TGG 0.531569 5.4:-61359530 MS.gene49203:CDS
GGTTCATCATTGGGTTGATG+TGG 0.536548 5.4:+61360682 None:intergenic
GGGTGGAATTCAACTAGAGA+AGG 0.545369 5.4:-61359261 MS.gene49203:CDS
CAAATCAATGAAATTGCGAA+TGG 0.547383 5.4:-61359438 MS.gene49203:CDS
GGGAACTACGTTTGGAATGG+TGG 0.550077 5.4:+61360539 None:intergenic
TGACTAAAATAAGGTATGGT+AGG 0.550916 5.4:+61359588 None:intergenic
TAAGAAGAGATGAAATTGCT+AGG 0.556457 5.4:-61359110 MS.gene49203:CDS
GAATAGTAAGTATATAGTTG+AGG 0.557074 5.4:-61359184 MS.gene49203:CDS
GCCGTGACTAAAATAAGGTA+TGG 0.560100 5.4:+61359584 None:intergenic
CAAAGTGCAGTTGCAAATGG+AGG 0.563559 5.4:-61359006 MS.gene49203:CDS
TTGCCTCGACCTTCTTCGGA+GGG 0.564321 5.4:+61360519 None:intergenic
TTGAGGATTGGAAAGTTGGG+TGG 0.569689 5.4:-61359167 MS.gene49203:CDS
GGCTCAAGTTCATATATGGA+AGG 0.573714 5.4:+61359666 None:intergenic
GGAGGGAACTACGTTTGGAA+TGG 0.580154 5.4:+61360536 None:intergenic
GACATATAGAACAGAACCAA+AGG 0.583623 5.4:+61359494 None:intergenic
ATCTTGGTTGGTGCTTAGAG+AGG 0.584062 5.4:+61359554 None:intergenic
GCGAATGGTTTGCGCGAAAG+TGG 0.587045 5.4:-61359423 MS.gene49203:CDS
ACATATAGAACAGAACCAAA+GGG 0.592505 5.4:+61359495 None:intergenic
GGTTGATGTGGCCTCGACCT+GGG 0.592829 5.4:+61360694 None:intergenic
GTTCCCTCCGAAGAAGGTCG+AGG 0.594862 5.4:-61360522 MS.gene49203:CDS
TGGTGCTTAGAGAGGCACTT+TGG 0.597056 5.4:+61359562 None:intergenic
ATGATGAAGTGAAGGAAATG+AGG 0.601521 5.4:-61359059 MS.gene49203:CDS
TTTGCCTCGACCTTCTTCGG+AGG 0.601667 5.4:+61360518 None:intergenic
GCCTCGACCTGGGTATGGTA+CGG 0.604546 5.4:+61360704 None:intergenic
GCCGTACCATACCCAGGTCG+AGG 0.605968 5.4:-61360705 MS.gene49203:CDS
TTGGTCCATCATTATTGGAG+AGG 0.607037 5.4:+61359212 None:intergenic
TCTGTTCTATATGTCTCACA+AGG 0.608612 5.4:-61359486 MS.gene49203:CDS
TAGCTCTGAATAACATACCA+TGG 0.609800 5.4:-61359716 MS.gene49203:CDS
TGGGTGGAGAGTGGAGACGG+AGG 0.613549 5.4:-61359151 MS.gene49203:CDS
TACGGCTACTACGTGAGTGG+TGG 0.618240 5.4:+61360722 None:intergenic
TGGAGATTAAGAGCTTGCAT+AGG 0.622718 5.4:+61360661 None:intergenic
GCTCAAGTTCATATATGGAA+GGG 0.622979 5.4:+61359667 None:intergenic
AAAGTGCAGTTGCAAATGGA+GGG 0.623483 5.4:-61359005 MS.gene49203:CDS
AACGTGTGGATTACATTCCG+GGG 0.625241 5.4:-61359809 MS.gene49203:CDS
TGCGTGGAGAAAGTTCTAAG+TGG 0.625771 5.4:-61359380 MS.gene49203:CDS
ACGGCTACTACGTGAGTGGT+GGG 0.632053 5.4:+61360723 None:intergenic
ACTAACCTGAAGCATTTACT+GGG 0.632218 5.4:+61360265 None:intergenic
TGAAGGTTATGAAAATGTTG+AGG 0.642161 5.4:+61360634 None:intergenic
TTTGGGTGATGATGAAGTGA+AGG 0.648831 5.4:-61359067 MS.gene49203:CDS
AGAAGTTGGTGACAAACGTG+TGG 0.664123 5.4:-61359823 MS.gene49203:CDS
AAAGTGGTGTTAGATTCTTG+TGG 0.666670 5.4:-61359407 MS.gene49203:CDS
GCTACTACGTGAGTGGTGGG+TGG 0.675528 5.4:+61360726 None:intergenic
AGATTCTTGTGGATAATGCG+TGG 0.682535 5.4:-61359396 MS.gene49203:CDS
TGGTACGGCTACTACGTGAG+TGG 0.683850 5.4:+61360719 None:intergenic
ACTCTCAATTGGTCACACCA+TGG 0.684804 5.4:+61359324 None:intergenic
TAAGTGGAAAGATATTTGTG+GGG 0.693286 5.4:-61359364 MS.gene49203:CDS
TTGATGCATAGTGCTATAGG+TGG 0.705531 5.4:-61359300 MS.gene49203:CDS
GTAGTAGCCGTACCATACCC+AGG 0.710129 5.4:-61360711 MS.gene49203:CDS
CTGTTCTATATGTCTCACAA+GGG 0.733356 5.4:-61359485 MS.gene49203:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTATGTGTTTTTAT+GGG - chr5.4:61359491-61359510 MS.gene49203:CDS 10.0%
!!! TATTTATTTATGTGTTTTTA+TGG - chr5.4:61359490-61359509 MS.gene49203:CDS 10.0%
!!! TCTTATTTTTAATTTTGTAT+GGG - chr5.4:61359734-61359753 MS.gene49203:CDS 10.0%
!!! TTATTATCATAGTTTTTTTT+AGG + chr5.4:61359792-61359811 None:intergenic 10.0%
!! TTAAACATGATTATATAACT+TGG - chr5.4:61360162-61360181 MS.gene49203:intron 15.0%
!!! GTCTTATTTTTAATTTTGTA+TGG - chr5.4:61359733-61359752 MS.gene49203:CDS 15.0%
!!! TACTGTTTTTACTAAATTTA+AGG - chr5.4:61359455-61359474 MS.gene49203:CDS 15.0%
!! ACTATATACTTACTATTCAA+AGG + chr5.4:61360506-61360525 None:intergenic 20.0%
!! ATGTAATATATTACCAAGAA+AGG + chr5.4:61360735-61360754 None:intergenic 20.0%
!! CATTAATTATAGTTTAGGAA+TGG - chr5.4:61359618-61359637 MS.gene49203:CDS 20.0%
!! CATTCCTAAACTATAATTAA+TGG + chr5.4:61359620-61359639 None:intergenic 20.0%
!! GATAAACTCAAAAAAATAGA+TGG - chr5.4:61359565-61359584 MS.gene49203:CDS 20.0%
!! TATAATCATGTTTAACATCT+TGG + chr5.4:61360157-61360176 None:intergenic 20.0%
!!! AAAGGCTTTCATATTATTTT+CGG + chr5.4:61360717-61360736 None:intergenic 20.0%
!!! ACATGATAGTTATTTGTTTT+GGG - chr5.4:61359292-61359311 MS.gene49203:CDS 20.0%
!!! TACATGATAGTTATTTGTTT+TGG - chr5.4:61359291-61359310 MS.gene49203:CDS 20.0%
!!! TTTCTTGGTAATATATTACA+TGG - chr5.4:61360734-61360753 MS.gene49203:CDS 20.0%
!!! TTTTGTTGTTTGTTTTTGTA+GGG + chr5.4:61359121-61359140 None:intergenic 20.0%
!!! TTTTTGTTGTTTGTTTTTGT+AGG + chr5.4:61359122-61359141 None:intergenic 20.0%
! AAACTATAATTAATGGTGGT+GGG + chr5.4:61359613-61359632 None:intergenic 25.0%
! AAACTCAAAAAAATAGATGG+TGG - chr5.4:61359568-61359587 MS.gene49203:CDS 25.0%
! AACTCAAAAAAATAGATGGT+GGG - chr5.4:61359569-61359588 MS.gene49203:CDS 25.0%
! AATAATATGAAAGCCTTTCT+TGG - chr5.4:61360719-61360738 MS.gene49203:CDS 25.0%
! AATAGATGAAGTTTGCAATT+TGG - chr5.4:61359537-61359556 MS.gene49203:CDS 25.0%
! ACCACCATTAATTATAGTTT+AGG - chr5.4:61359613-61359632 MS.gene49203:CDS 25.0%
! CTATCATGTATAATCACATT+CGG + chr5.4:61359281-61359300 None:intergenic 25.0%
! GAATAGTAAGTATATAGTTG+AGG - chr5.4:61360508-61360527 MS.gene49203:CDS 25.0%
! GTTAGAAGATTTATGGATTT+GGG - chr5.4:61360608-61360627 MS.gene49203:CDS 25.0%
! TAAACTATAATTAATGGTGG+TGG + chr5.4:61359614-61359633 None:intergenic 25.0%
! TAAATTGTTGAAACAGAAGT+TGG - chr5.4:61359855-61359874 MS.gene49203:intron 25.0%
! TATACTTACTATTCAAAGGT+TGG + chr5.4:61360502-61360521 None:intergenic 25.0%
! TCCTAAACTATAATTAATGG+TGG + chr5.4:61359617-61359636 None:intergenic 25.0%
! TCTATACCAATTTACACAAT+TGG - chr5.4:61360080-61360099 MS.gene49203:intron 25.0%
! TGTTAGAAGATTTATGGATT+TGG - chr5.4:61360607-61360626 MS.gene49203:CDS 25.0%
!! TCTTAAACATTTTCGTCTTT+TGG - chr5.4:61359388-61359407 MS.gene49203:CDS 25.0%
AAAGATATTTGTGGGGATAA+GGG - chr5.4:61360335-61360354 MS.gene49203:CDS 30.0%
ACATATAGAACAGAACCAAA+GGG + chr5.4:61360200-61360219 None:intergenic 30.0%
ACGAAAAGCAAATATACATC+AGG + chr5.4:61359693-61359712 None:intergenic 30.0%
ACTTCATCTATTGTACCAAA+TGG + chr5.4:61359529-61359548 None:intergenic 30.0%
ATCATGTTTAACATCTTGGT+TGG + chr5.4:61360153-61360172 None:intergenic 30.0%
ATTATTGGAGAGGTAAGAAA+AGG + chr5.4:61360473-61360492 None:intergenic 30.0%
CAAATCAATGAAATTGCGAA+TGG - chr5.4:61360254-61360273 MS.gene49203:intron 30.0%
CTAAGTGGAAAGATATTTGT+GGG - chr5.4:61360327-61360346 MS.gene49203:CDS 30.0%
CTTAAAACATCAATTGCTTG+AGG + chr5.4:61360050-61360069 None:intergenic 30.0%
GAATCAAGTAGTTTCTCAAA+TGG + chr5.4:61359245-61359264 None:intergenic 30.0%
GAGCTAATTCTAACAATCTA+CGG + chr5.4:61359962-61359981 None:intergenic 30.0%
GTAAGTATATAGTTGAGGAT+TGG - chr5.4:61360513-61360532 MS.gene49203:CDS 30.0%
TAAGAAGAGATGAAATTGCT+AGG - chr5.4:61360582-61360601 MS.gene49203:CDS 30.0%
TAAGTGGAAAGATATTTGTG+GGG - chr5.4:61360328-61360347 MS.gene49203:CDS 30.0%
TAGAGAGAGTTATAGCTTAT+GGG - chr5.4:61359644-61359663 MS.gene49203:CDS 30.0%
TATGAAAATGTTGAGGTTGT+TGG + chr5.4:61359054-61359073 None:intergenic 30.0%
TCTAAGTGGAAAGATATTTG+TGG - chr5.4:61360326-61360345 MS.gene49203:CDS 30.0%
TGAAGGTTATGAAAATGTTG+AGG + chr5.4:61359061-61359080 None:intergenic 30.0%
TGACTAAAATAAGGTATGGT+AGG + chr5.4:61360107-61360126 None:intergenic 30.0%
TTAGAGAGAGTTATAGCTTA+TGG - chr5.4:61359643-61359662 MS.gene49203:CDS 30.0%
TTTCGTGTATTTATCAGTTG+AGG - chr5.4:61359707-61359726 MS.gene49203:CDS 30.0%
!! TAGGCTTGTTAGAAGATTTA+TGG - chr5.4:61360601-61360620 MS.gene49203:CDS 30.0%
!! TTTCGTCTTTTGGAGAAAAA+TGG - chr5.4:61359398-61359417 MS.gene49203:CDS 30.0%
!!! ACCATACCTTATTTTAGTCA+CGG - chr5.4:61360107-61360126 MS.gene49203:intron 30.0%
AAGATATTTGTGGGGATAAG+GGG - chr5.4:61360336-61360355 MS.gene49203:CDS 35.0%
ATAGTTGAGGATTGGAAAGT+TGG - chr5.4:61360521-61360540 MS.gene49203:CDS 35.0%
ATCTATTGTACCAAATGGAG+AGG + chr5.4:61359524-61359543 None:intergenic 35.0%
ATGATGAAGTGAAGGAAATG+AGG - chr5.4:61360633-61360652 MS.gene49203:CDS 35.0%
CATCGTGAAGTTGAAAATCT+TGG + chr5.4:61359926-61359945 None:intergenic 35.0%
CTGTTCTATATGTCTCACAA+GGG - chr5.4:61360207-61360226 MS.gene49203:intron 35.0%
GAAAGATATTTGTGGGGATA+AGG - chr5.4:61360334-61360353 MS.gene49203:CDS 35.0%
GACATATAGAACAGAACCAA+AGG + chr5.4:61360201-61360220 None:intergenic 35.0%
GCTCAAGTTCATATATGGAA+GGG + chr5.4:61360028-61360047 None:intergenic 35.0%
GTAGGTCCAATTGTGTAAAT+TGG + chr5.4:61360089-61360108 None:intergenic 35.0%
GTGTATTTATCAGTTGAGGT+TGG - chr5.4:61359711-61359730 MS.gene49203:CDS 35.0%
TAGTTGAGGATTGGAAAGTT+GGG - chr5.4:61360522-61360541 MS.gene49203:CDS 35.0%
TATGCATCAACACTCTCAAT+TGG + chr5.4:61360382-61360401 None:intergenic 35.0%
TATTGTGCTTTCTTCATCCA+TGG + chr5.4:61359996-61360015 None:intergenic 35.0%
TCTGTTCTATATGTCTCACA+AGG - chr5.4:61360206-61360225 MS.gene49203:intron 35.0%
TCTTACCTCTCCAATAATGA+TGG - chr5.4:61360475-61360494 MS.gene49203:CDS 35.0%
TGAAGCTGTTGCTACTAAAA+TGG - chr5.4:61359214-61359233 MS.gene49203:CDS 35.0%
TTACAAGAGTTGCGAATAAG+AGG - chr5.4:61359315-61359334 MS.gene49203:CDS 35.0%
TTGAGGCTCAAGTTCATATA+TGG + chr5.4:61360033-61360052 None:intergenic 35.0%
! AAAGGTTGGTCCATCATTAT+TGG + chr5.4:61360488-61360507 None:intergenic 35.0%
! AAAGTGGTGTTAGATTCTTG+TGG - chr5.4:61360285-61360304 MS.gene49203:CDS 35.0%
! AACTAACCTGAAGCATTTAC+TGG + chr5.4:61359431-61359450 None:intergenic 35.0%
! ACTAACCTGAAGCATTTACT+GGG + chr5.4:61359430-61359449 None:intergenic 35.0%
! ATAGTGCTATAGGTGGTTTT+TGG - chr5.4:61360399-61360418 MS.gene49203:CDS 35.0%
!! TAGCTCTGAATAACATACCA+TGG - chr5.4:61359976-61359995 MS.gene49203:intron 35.0%
!!! ACTAGAGAAGGTTTGTTTTG+TGG - chr5.4:61360443-61360462 MS.gene49203:CDS 35.0%
!!! GTTGTTTGTTTTTGTAGGGT+CGG + chr5.4:61359117-61359136 None:intergenic 35.0%
AAAGTGCAGTTGCAAATGGA+GGG - chr5.4:61360687-61360706 MS.gene49203:CDS 40.0%
AGATTCTTGTGGATAATGCG+TGG - chr5.4:61360296-61360315 MS.gene49203:CDS 40.0%
AGCTTGCATAGGTTCATCAT+TGG + chr5.4:61359023-61359042 None:intergenic 40.0%
CCATTCTTCTGTGACTATGA+AGG + chr5.4:61359078-61359097 None:intergenic 40.0%
CCTTCATAGTCACAGAAGAA+TGG - chr5.4:61359075-61359094 MS.gene49203:CDS 40.0%
CTTTGGCCGTGACTAAAATA+AGG + chr5.4:61360116-61360135 None:intergenic 40.0%
GATTACCCAGTAAATGCTTC+AGG - chr5.4:61359422-61359441 MS.gene49203:CDS 40.0%
GCCGTGACTAAAATAAGGTA+TGG + chr5.4:61360111-61360130 None:intergenic 40.0%
GCTTGCATAGGTTCATCATT+GGG + chr5.4:61359022-61359041 None:intergenic 40.0%
GGCTCAAGTTCATATATGGA+AGG + chr5.4:61360029-61360048 None:intergenic 40.0%
TGGAGATTAAGAGCTTGCAT+AGG + chr5.4:61359034-61359053 None:intergenic 40.0%
TGGCTAGATAATCAACCCTT+TGG - chr5.4:61360182-61360201 MS.gene49203:intron 40.0%
TTGATGCATAGTGCTATAGG+TGG - chr5.4:61360392-61360411 MS.gene49203:CDS 40.0%
TTGGTCCATCATTATTGGAG+AGG + chr5.4:61360483-61360502 None:intergenic 40.0%
! AAACGTGTGGATTACATTCC+GGG - chr5.4:61359882-61359901 MS.gene49203:intron 40.0%
! ATGTTCATGTTGCGTCGTTT+TGG - chr5.4:61359339-61359358 MS.gene49203:CDS 40.0%
! CAAACGTGTGGATTACATTC+CGG - chr5.4:61359881-61359900 MS.gene49203:intron 40.0%
! CTCACAAGGGAGTTTTCTTT+CGG - chr5.4:61360220-61360239 MS.gene49203:intron 40.0%
! GTGTTGATGCATAGTGCTAT+AGG - chr5.4:61360389-61360408 MS.gene49203:CDS 40.0%
! TTTGGGTGATGATGAAGTGA+AGG - chr5.4:61360625-61360644 MS.gene49203:CDS 40.0%
!!! ATAAGGGGTTTGTTTTGCCA+TGG - chr5.4:61360351-61360370 MS.gene49203:CDS 40.0%
!!! GTGGTTTTTGGTCACATTGT+GGG - chr5.4:61360411-61360430 MS.gene49203:CDS 40.0%
ACTCTCAATTGGTCACACCA+TGG + chr5.4:61360371-61360390 None:intergenic 45.0%
AGACGAATTGATGTGTTCCC+CGG + chr5.4:61359903-61359922 None:intergenic 45.0%
ATCTTTGCCTCGACCTTCTT+CGG + chr5.4:61359180-61359199 None:intergenic 45.0%
CAAAGTGCAGTTGCAAATGG+AGG - chr5.4:61360686-61360705 MS.gene49203:CDS 45.0%
CTCCATTTGCAACTGCACTT+TGG + chr5.4:61360688-61360707 None:intergenic 45.0%
GGGTGGAATTCAACTAGAGA+AGG - chr5.4:61360431-61360450 MS.gene49203:CDS 45.0%
GGGTTAAGATCCTCTCCATT+TGG - chr5.4:61359511-61359530 MS.gene49203:CDS 45.0%
TGCCAAAGTGCAGTTGCAAA+TGG - chr5.4:61360683-61360702 MS.gene49203:CDS 45.0%
TTGAGGATTGGAAAGTTGGG+TGG - chr5.4:61360525-61360544 MS.gene49203:CDS 45.0%
! AACGTGTGGATTACATTCCG+GGG - chr5.4:61359883-61359902 MS.gene49203:intron 45.0%
! ATCTTGGTTGGTGCTTAGAG+AGG + chr5.4:61360141-61360160 None:intergenic 45.0%
!! AGAAGTTGGTGACAAACGTG+TGG - chr5.4:61359869-61359888 MS.gene49203:intron 45.0%
!! GGTTCATCATTGGGTTGATG+TGG + chr5.4:61359013-61359032 None:intergenic 45.0%
!! TGCGTGGAGAAAGTTCTAAG+TGG - chr5.4:61360312-61360331 MS.gene49203:CDS 45.0%
!!! GGTGGTTTTTGGTCACATTG+TGG - chr5.4:61360410-61360429 MS.gene49203:CDS 45.0%
!!! GTTTTTGGTCACATTGTGGG+TGG - chr5.4:61360414-61360433 MS.gene49203:CDS 45.0%
AACGTAGTTCCCTCCGAAGA+AGG - chr5.4:61359164-61359183 MS.gene49203:CDS 50.0%
AGAAGAAACGACGCCGACAT+AGG + chr5.4:61359365-61359384 None:intergenic 50.0%
GGAGGGAACTACGTTTGGAA+TGG + chr5.4:61359159-61359178 None:intergenic 50.0%
TCTTCGGAGGGAACTACGTT+TGG + chr5.4:61359164-61359183 None:intergenic 50.0%
TTGGAAAGTTGGGTGGAGAG+TGG - chr5.4:61360532-61360551 MS.gene49203:CDS 50.0%
! GGGAACTACGTTTGGAATGG+TGG + chr5.4:61359156-61359175 None:intergenic 50.0%
!! TGCGTCGTTTTGGCCTATGT+CGG - chr5.4:61359349-61359368 MS.gene49203:CDS 50.0%
!! TGGTGCTTAGAGAGGCACTT+TGG + chr5.4:61360133-61360152 None:intergenic 50.0%
!! TGTAGGGTCGGAGTTGATGA+GGG + chr5.4:61359105-61359124 None:intergenic 50.0%
!! TTGTAGGGTCGGAGTTGATG+AGG + chr5.4:61359106-61359125 None:intergenic 50.0%
ACGGCTACTACGTGAGTGGT+GGG + chr5.4:61358972-61358991 None:intergenic 55.0%
AGTTGGGTGGAGAGTGGAGA+CGG - chr5.4:61360538-61360557 MS.gene49203:CDS 55.0%
GGTGGGACCTACTTAGTGGT+AGG + chr5.4:61359596-61359615 None:intergenic 55.0%
GGTGGGTCCTACCACTAAGT+AGG - chr5.4:61359586-61359605 MS.gene49203:CDS 55.0%
GTAGTAGCCGTACCATACCC+AGG - chr5.4:61358981-61359000 MS.gene49203:CDS 55.0%
TACGGCTACTACGTGAGTGG+TGG + chr5.4:61358973-61358992 None:intergenic 55.0%
TGGTACGGCTACTACGTGAG+TGG + chr5.4:61358976-61358995 None:intergenic 55.0%
TTGCCTCGACCTTCTTCGGA+GGG + chr5.4:61359176-61359195 None:intergenic 55.0%
TTTGCCTCGACCTTCTTCGG+AGG + chr5.4:61359177-61359196 None:intergenic 55.0%
! GCGAATGGTTTGCGCGAAAG+TGG - chr5.4:61360269-61360288 MS.gene49203:intron 55.0%
!! TGGTGGTGGGACCTACTTAG+TGG + chr5.4:61359600-61359619 None:intergenic 55.0%
ATGTGGCCTCGACCTGGGTA+TGG + chr5.4:61358996-61359015 None:intergenic 60.0%
GCCTCGACCTGGGTATGGTA+CGG + chr5.4:61358991-61359010 None:intergenic 60.0%
GTGGGTGGAGGAGGATTTGG+AGG + chr5.4:61358954-61358973 None:intergenic 60.0%
GTTCCCTCCGAAGAAGGTCG+AGG - chr5.4:61359170-61359189 MS.gene49203:CDS 60.0%
! GCTACTACGTGAGTGGTGGG+TGG + chr5.4:61358969-61358988 None:intergenic 60.0%
! GGTTGATGTGGCCTCGACCT+GGG + chr5.4:61359001-61359020 None:intergenic 60.0%
!! ACTACGTGAGTGGTGGGTGG+AGG + chr5.4:61358966-61358985 None:intergenic 60.0%
!! GTGGTGGGTGGAGGAGGATT+TGG + chr5.4:61358957-61358976 None:intergenic 60.0%
GCCGTACCATACCCAGGTCG+AGG - chr5.4:61358987-61359006 MS.gene49203:CDS 65.0%
TGGGTGGAGAGTGGAGACGG+AGG - chr5.4:61360541-61360560 MS.gene49203:CDS 65.0%
!! ACGTGAGTGGTGGGTGGAGG+AGG + chr5.4:61358963-61358982 None:intergenic 65.0%
!! GGGTTGATGTGGCCTCGACC+TGG + chr5.4:61359002-61359021 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 61358945 61360769 61358945 ID=MS.gene49203
chr5.4 mRNA 61358945 61360769 61358945 ID=MS.gene49203.t1;Parent=MS.gene49203
chr5.4 exon 61360271 61360769 61360271 ID=MS.gene49203.t1.exon1;Parent=MS.gene49203.t1
chr5.4 CDS 61360271 61360769 61360271 ID=cds.MS.gene49203.t1;Parent=MS.gene49203.t1
chr5.4 exon 61358945 61359843 61358945 ID=MS.gene49203.t1.exon2;Parent=MS.gene49203.t1
chr5.4 CDS 61358945 61359843 61358945 ID=cds.MS.gene49203.t1;Parent=MS.gene49203.t1
Gene Sequence

>MS.gene49203

ATGGAACCTCCAAATCCTCCTCCACCCACCACTCACGTAGTAGCCGTACCATACCCAGGTCGAGGCCACATCAACCCAATGATGAACCTATGCAAGCTCTTAATCTCCAACAACCTCAACATTTTCATAACCTTCATAGTCACAGAAGAATGGCTCACCCTCATCAACTCCGACCCTACAAAAACAAACAACAAAAACATCAAATTTGCCACCATTCCAAACGTAGTTCCCTCCGAAGAAGGTCGAGGCAAAGATTTTCTTAATTTTTTTGAAGCTGTTGCTACTAAAATGGAAGAGCCATTTGAGAAACTACTTGATTCGTTTGAGACAGTGCCGAATGTGATTATACATGATAGTTATTTGTTTTGGGTTACAAGAGTTGCGAATAAGAGGAATGTTCATGTTGCGTCGTTTTGGCCTATGTCGGCGTCGTTTCTTCTTGTTCTTAAACATTTTCGTCTTTTGGAGAAAAATGGTGATTACCCAGTAAATGCTTCAGGTTAGTTACTTTACTGTTTTTACTAAATTTAAGGTACTTTTCATTTTATTTATTTATGTGTTTTTATGGGTTAAGATCCTCTCCATTTGGTACAATAGATGAAGTTTGCAATTTGGAGATAGATAAACTCAAAAAAATAGATGGTGGGTCCTACCACTAAGTAGGTCCCACCACCATTAATTATAGTTTAGGAATGGAATTAGAGAGAGTTATAGCTTATGGGTTAAATCGATGTTTTACTCGACACCTGATGTATATTTGCTTTTCGTGTATTTATCAGTTGAGGTTGGTCTTATTTTTAATTTTGTATGGGATATGTCTCTTCTATAGTTTAATGTAATATTGCCTAAAAAAAACTATGATAATAAACACAATTTTTACATTAGAATATTGTGTGTTTTGTGTGTTGCTTAAATTGTTGAAACAGAAGTTGGTGACAAACGTGTGGATTACATTCCGGGGAACACATCAATTCGTCTCCAAGATTTTCAACTTCACGATGCAAACTTACGCATCCGTAGATTGTTAGAATTAGCTCTGAATAACATACCATGGATGAAGAAAGCACAATATCTATTATTCCCTTCCATATATGAACTTGAGCCTCAAGCAATTGATGTTTTAAGAGAAGAATTTTCTATACCAATTTACACAATTGGACCTACCATACCTTATTTTAGTCACGGCCAAAGTGCCTCTCTAAGCACCAACCAAGATGTTAAACATGATTATATAACTTGGCTAGATAATCAACCCTTTGGTTCTGTTCTATATGTCTCACAAGGGAGTTTTCTTTCGGTTTCAAGTGAACAAATCAATGAAATTGCGAATGGTTTGCGCGAAAGTGGTGTTAGATTCTTGTGGATAATGCGTGGAGAAAGTTCTAAGTGGAAAGATATTTGTGGGGATAAGGGGTTTGTTTTGCCATGGTGTGACCAATTGAGAGTGTTGATGCATAGTGCTATAGGTGGTTTTTGGTCACATTGTGGGTGGAATTCAACTAGAGAAGGTTTGTTTTGTGGTGTGCCTTTTCTTACCTCTCCAATAATGATGGACCAACCTTTGAATAGTAAGTATATAGTTGAGGATTGGAAAGTTGGGTGGAGAGTGGAGACGGAGGTTAAAGATGATGTTTTGATAAGAAGAGATGAAATTGCTAGGCTTGTTAGAAGATTTATGGATTTGGGTGATGATGAAGTGAAGGAAATGAGGAAAAGAGCAAGAGATCTTCAACAAATATGCCAAAGTGCAGTTGCAAATGGAGGGTCATCCGAAAATAATATGAAAGCCTTTCTTGGTAATATATTACATGGATTCAAACCATAG

Protein sequence

>MS.gene49203.t1

MEPPNPPPPTTHVVAVPYPGRGHINPMMNLCKLLISNNLNIFITFIVTEEWLTLINSDPTKTNNKNIKFATIPNVVPSEEGRGKDFLNFFEAVATKMEEPFEKLLDSFETVPNVIIHDSYLFWVTRVANKRNVHVASFWPMSASFLLVLKHFRLLEKNGDYPVNASEVGDKRVDYIPGNTSIRLQDFQLHDANLRIRRLLELALNNIPWMKKAQYLLFPSIYELEPQAIDVLREEFSIPIYTIGPTIPYFSHGQSASLSTNQDVKHDYITWLDNQPFGSVLYVSQGSFLSVSSEQINEIANGLRESGVRFLWIMRGESSKWKDICGDKGFVLPWCDQLRVLMHSAIGGFWSHCGWNSTREGLFCGVPFLTSPIMMDQPLNSKYIVEDWKVGWRVETEVKDDVLIRRDEIARLVRRFMDLGDDEVKEMRKRARDLQQICQSAVANGGSSENNMKAFLGNILHGFKP