AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90192


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90192.t1 MTR_4g094010 96.702 667 18 1 12 678 3 665 0.0 1333
MS.gene90192.t1 MTR_4g094050 75.535 654 147 6 25 674 41 685 0.0 1005
MS.gene90192.t1 MTR_4g094060 74.429 657 155 6 25 678 41 687 0.0 995
MS.gene90192.t1 MTR_4g054020 71.724 580 151 4 93 668 4 574 0.0 866
MS.gene90192.t1 MTR_4g094090 59.904 626 234 9 30 653 6 616 0.0 752
MS.gene90192.t1 MTR_4g093845 58.479 631 238 9 23 648 26 637 0.0 751
MS.gene90192.t1 MTR_6g066240 52.087 647 284 6 37 672 47 678 0.0 652
MS.gene90192.t1 MTR_4g076970 45.300 649 325 8 26 661 20 651 0.0 571
MS.gene90192.t1 MTR_4g076900 45.750 647 324 8 35 669 7 638 0.0 556
MS.gene90192.t1 MTR_4g076940 45.095 683 341 10 6 669 35 702 0.0 556
MS.gene90192.t1 MTR_4g076940 45.052 677 338 9 12 669 1 662 0.0 554
MS.gene90192.t1 MTR_4g076940 45.439 581 292 7 101 669 2 569 1.47e-164 486
MS.gene90192.t1 MTR_2g095390 37.601 617 355 9 34 640 104 700 7.47e-130 400
MS.gene90192.t1 MTR_1g054960 32.914 556 326 15 49 582 17 547 6.00e-78 260
MS.gene90192.t1 MTR_1g115790 29.238 643 381 14 54 638 117 743 1.97e-76 260
MS.gene90192.t1 MTR_7g100120 29.412 544 360 8 52 580 120 654 7.43e-76 258
MS.gene90192.t1 MTR_8g093840 29.431 598 392 11 57 641 54 634 1.03e-75 256
MS.gene90192.t1 MTR_7g106880 32.246 552 334 13 53 580 3 538 2.88e-75 253
MS.gene90192.t1 MTR_2g078080 30.221 589 376 12 56 640 47 604 5.24e-75 253
MS.gene90192.t1 MTR_1g108340 30.090 668 404 18 30 676 66 691 1.72e-74 254
MS.gene90192.t1 MTR_1g108340 30.090 668 404 18 30 676 66 691 1.99e-74 254
MS.gene90192.t1 MTR_7g106880 32.246 552 334 13 53 580 154 689 5.61e-74 253
MS.gene90192.t1 MTR_3g096410 30.100 598 386 14 57 641 56 634 3.06e-73 249
MS.gene90192.t1 MTR_1g054935 31.183 558 336 15 53 582 3 540 1.73e-71 243
MS.gene90192.t1 MTR_4g116540 28.209 592 385 12 58 640 74 634 2.33e-71 244
MS.gene90192.t1 MTR_1g054935 30.366 573 357 14 35 582 147 702 2.90e-70 243
MS.gene90192.t1 MTR_2g079980 32.866 499 308 10 55 546 27 505 2.65e-68 234
MS.gene90192.t1 MTR_4g094020 59.048 210 51 6 244 449 168 346 1.96e-66 222
MS.gene90192.t1 MTR_1g096580 33.333 492 287 17 20 491 51 521 2.56e-63 223
MS.gene90192.t1 MTR_1g093990 29.915 585 354 18 33 589 55 611 8.28e-62 218
MS.gene90192.t1 MTR_1g099570 27.487 593 393 13 59 647 50 609 3.44e-61 216
MS.gene90192.t1 MTR_5g025470 28.686 624 395 16 35 641 45 635 5.48e-61 216
MS.gene90192.t1 MTR_5g096390 30.319 564 359 16 44 592 94 638 1.03e-58 210
MS.gene90192.t1 MTR_8g059150 30.677 502 316 9 55 546 62 541 3.22e-58 208
MS.gene90192.t1 MTR_5g070320 26.409 621 399 12 55 636 165 766 2.34e-54 202
MS.gene90192.t1 MTR_5g070320 25.693 541 342 12 59 573 858 1364 1.92e-40 160
MS.gene90192.t1 MTR_7g098780 25.299 668 435 16 5 642 779 1412 3.01e-53 199
MS.gene90192.t1 MTR_7g098780 25.199 627 416 13 52 640 168 779 3.61e-39 156
MS.gene90192.t1 MTR_8g107450 41.502 253 141 4 54 304 64 311 4.87e-52 193
MS.gene90192.t1 MTR_8g107450 24.079 353 233 11 310 645 479 813 1.02e-18 91.3
MS.gene90192.t1 MTR_2g101090 28.947 532 335 15 51 567 863 1366 5.96e-51 192
MS.gene90192.t1 MTR_2g101090 23.858 591 369 15 102 640 202 763 7.33e-32 133
MS.gene90192.t1 MTR_3g463680 26.415 530 351 12 51 567 835 1338 5.89e-50 189
MS.gene90192.t1 MTR_3g463680 26.752 628 390 14 55 638 164 765 5.79e-44 171
MS.gene90192.t1 MTR_2g102670 26.199 584 372 16 10 559 773 1331 1.12e-48 185
MS.gene90192.t1 MTR_2g102670 22.990 622 394 16 58 636 166 745 2.94e-31 131
MS.gene90192.t1 MTR_7g104130 26.634 612 396 15 49 641 873 1450 4.22e-48 183
MS.gene90192.t1 MTR_7g104130 24.519 624 413 11 59 640 184 791 6.23e-42 164
MS.gene90192.t1 MTR_2g102660 26.975 519 336 13 59 559 855 1348 5.09e-48 183
MS.gene90192.t1 MTR_2g102660 24.238 623 403 15 58 636 166 763 1.59e-39 157
MS.gene90192.t1 MTR_7g098320 26.100 659 420 17 14 641 819 1441 5.58e-48 183
MS.gene90192.t1 MTR_7g098320 24.920 626 407 16 58 640 157 762 2.49e-39 156
MS.gene90192.t1 MTR_7g104150 27.243 613 391 17 49 641 873 1450 5.97e-48 182
MS.gene90192.t1 MTR_7g104150 25.563 622 405 12 59 638 184 789 4.75e-42 165
MS.gene90192.t1 MTR_4g011630 26.834 518 338 12 59 559 866 1359 7.10e-48 182
MS.gene90192.t1 MTR_4g011630 23.680 625 416 13 58 640 172 777 1.15e-34 142
MS.gene90192.t1 MTR_4g123850 27.061 643 391 15 46 638 154 768 9.32e-48 182
MS.gene90192.t1 MTR_4g123850 26.930 531 337 13 53 564 852 1350 5.76e-43 167
MS.gene90192.t1 MTR_7g098760 25.913 575 373 13 14 559 823 1373 1.03e-47 182
MS.gene90192.t1 MTR_7g098760 24.483 629 406 15 58 640 161 766 1.85e-39 157
MS.gene90192.t1 MTR_7g104110 27.229 617 386 18 49 641 865 1442 1.57e-47 181
MS.gene90192.t1 MTR_7g104110 25.041 611 400 12 59 627 178 772 3.67e-42 165
MS.gene90192.t1 MTR_8g014360 28.571 539 328 15 51 567 897 1400 1.96e-47 181
MS.gene90192.t1 MTR_8g014360 25.378 662 417 17 58 674 177 806 9.34e-44 170
MS.gene90192.t1 MTR_5g030910 35.691 311 165 8 12 314 25 308 3.39e-47 178
MS.gene90192.t1 MTR_5g030910 25.267 281 198 5 365 645 455 723 9.22e-23 103
MS.gene90192.t1 MTR_7g104130 27.875 513 332 12 49 545 873 1363 1.24e-46 179
MS.gene90192.t1 MTR_7g104130 24.960 625 409 13 59 640 184 791 8.38e-42 164
MS.gene90192.t1 MTR_1g050525 27.184 515 340 11 59 559 894 1387 1.40e-46 179
MS.gene90192.t1 MTR_1g050525 24.801 629 401 19 59 638 176 781 3.57e-37 150
MS.gene90192.t1 MTR_2g102640 25.206 607 407 16 51 642 850 1424 1.60e-46 178
MS.gene90192.t1 MTR_2g102640 24.160 625 401 16 58 636 166 763 1.60e-37 150
MS.gene90192.t1 MTR_4g011640 25.205 611 399 15 51 641 855 1427 5.25e-46 177
MS.gene90192.t1 MTR_4g011640 23.296 631 403 14 58 636 170 771 3.75e-35 143
MS.gene90192.t1 MTR_7g098740 26.140 570 368 14 18 559 790 1334 5.65e-46 177
MS.gene90192.t1 MTR_7g098740 25.484 620 407 16 58 638 161 764 1.12e-40 160
MS.gene90192.t1 MTR_4g113070 26.778 661 408 18 58 667 149 784 1.11e-44 173
MS.gene90192.t1 MTR_4g113070 26.054 522 353 11 51 559 836 1337 2.74e-39 156
MS.gene90192.t1 MTR_7g098750 25.670 522 355 9 51 559 605 1106 1.60e-44 172
MS.gene90192.t1 MTR_7g098750 23.447 499 334 12 159 638 25 494 6.04e-25 111
MS.gene90192.t1 MTR_7g098750 25.670 522 355 9 51 559 875 1376 1.73e-44 172
MS.gene90192.t1 MTR_7g098750 24.013 633 404 14 58 640 161 766 9.19e-40 157
MS.gene90192.t1 MTR_3g107870 26.103 544 368 10 49 579 880 1402 2.82e-44 171
MS.gene90192.t1 MTR_3g107870 24.691 648 411 17 58 655 165 785 1.46e-39 157
MS.gene90192.t1 MTR_7g104100 25.902 610 403 17 49 641 871 1448 4.60e-44 171
MS.gene90192.t1 MTR_7g104100 25.556 630 395 18 59 638 182 787 8.77e-42 164
MS.gene90192.t1 MTR_4g011620 24.887 663 423 18 13 641 799 1420 5.35e-44 171
MS.gene90192.t1 MTR_4g011620 25.469 640 403 19 58 648 160 774 8.74e-41 161
MS.gene90192.t1 MTR_7g098750 25.869 518 347 9 51 555 875 1368 8.04e-44 170
MS.gene90192.t1 MTR_7g098750 24.013 633 404 14 58 640 161 766 1.74e-39 157
MS.gene90192.t1 MTR_8g014360 25.378 662 417 17 58 674 177 806 1.76e-43 169
MS.gene90192.t1 MTR_8g014360 29.909 438 255 14 51 465 897 1305 1.24e-40 160
MS.gene90192.t1 MTR_1g011650 25.758 528 347 13 51 559 869 1370 2.83e-43 168
MS.gene90192.t1 MTR_1g011650 26.087 644 377 19 59 641 166 771 1.44e-41 163
MS.gene90192.t1 MTR_1g011640 24.807 649 420 20 19 639 803 1411 1.30e-42 166
MS.gene90192.t1 MTR_1g011640 25.596 629 397 15 59 640 154 758 8.68e-34 139
MS.gene90192.t1 MTR_7g098800 26.365 641 414 19 28 641 760 1369 1.96e-42 166
MS.gene90192.t1 MTR_7g098800 24.601 626 417 14 52 638 126 735 3.03e-41 162
MS.gene90192.t1 MTR_1g094660 39.163 263 145 7 37 295 501 752 4.20e-42 164
MS.gene90192.t1 MTR_7g098300 25.114 657 425 16 14 641 823 1441 5.04e-42 165
MS.gene90192.t1 MTR_7g098300 24.760 626 408 15 58 640 161 766 2.48e-40 159
MS.gene90192.t1 MTR_1g094660 39.163 263 145 7 37 295 501 752 5.26e-42 164
MS.gene90192.t1 MTR_1g492950 26.938 516 340 15 59 559 894 1387 7.77e-42 164
MS.gene90192.t1 MTR_1g492950 24.242 627 407 15 59 638 189 794 4.84e-33 137
MS.gene90192.t1 MTR_7g098370 24.754 610 405 14 51 641 833 1407 1.52e-41 163
MS.gene90192.t1 MTR_7g098370 25.518 627 398 19 58 638 161 764 4.86e-40 159
MS.gene90192.t1 MTR_5g070320 24.957 577 375 12 99 636 18 575 6.53e-41 161
MS.gene90192.t1 MTR_5g070320 27.609 460 275 11 59 492 667 1094 1.67e-40 160
MS.gene90192.t1 MTR_5g070320 27.609 460 275 11 59 492 571 998 1.48e-40 160
MS.gene90192.t1 MTR_5g070320 25.253 495 346 10 147 636 4 479 9.93e-38 151
MS.gene90192.t1 MTR_7g101780 38.934 244 142 6 55 295 510 749 8.65e-40 157
MS.gene90192.t1 MTR_7g098320 24.920 626 407 16 58 640 157 762 2.65e-39 156
MS.gene90192.t1 MTR_7g098320 27.044 477 303 11 14 465 819 1275 6.03e-38 152
MS.gene90192.t1 MTR_1g063920 36.260 262 154 6 37 295 477 728 3.10e-39 155
MS.gene90192.t1 MTR_4g058000 33.969 262 160 6 37 295 491 742 1.48e-33 138
MS.gene90192.t1 MTR_7g098890 26.307 612 366 24 36 610 756 1319 4.05e-32 134
MS.gene90192.t1 MTR_7g098890 23.557 641 436 16 52 667 129 740 1.06e-27 120
MS.gene90192.t1 MTR_3g040670 35.238 210 130 3 79 285 201 407 1.88e-30 125
MS.gene90192.t1 MTR_7g091350 34.052 232 76 6 37 265 3 160 4.34e-29 114
MS.gene90192.t1 MTR_4g094080 28.212 358 111 11 298 650 58 274 9.29e-25 105
MS.gene90192.t1 MTR_4g094080 40.000 130 54 6 41 160 4 119 8.84e-13 70.1
MS.gene90192.t1 MTR_4g053980 53.774 106 35 5 1 94 1 104 1.76e-23 96.3
MS.gene90192.t1 MTR_7g407080 23.830 470 281 13 110 559 160 572 2.11e-19 92.8
MS.gene90192.t1 MTR_8g103450 30.000 200 109 5 55 252 244 414 1.53e-18 89.0
MS.gene90192.t1 MTR_7g079540 28.571 266 150 9 24 268 73 319 2.09e-14 75.5
MS.gene90192.t1 MTR_1567s0010 28.426 197 124 5 70 263 253 435 3.95e-14 75.5
MS.gene90192.t1 MTR_4g089130 41.860 86 47 1 175 260 1 83 4.02e-14 68.9
MS.gene90192.t1 MTR_4g109720 30.415 217 130 10 59 268 404 606 5.55e-14 75.9
MS.gene90192.t1 MTR_4g081190 27.972 286 167 14 3 268 295 561 5.92e-14 76.3
MS.gene90192.t1 MTR_4g081190 29.224 219 129 8 59 268 1007 1208 8.93e-14 75.5
MS.gene90192.t1 MTR_7g033710 29.648 199 116 7 59 247 442 626 1.80e-13 74.3
MS.gene90192.t1 MTR_7g079540 29.778 225 120 8 24 231 73 276 3.69e-13 71.2
MS.gene90192.t1 MTR_1g059830 32.710 214 120 11 59 263 396 594 7.44e-13 72.0
MS.gene90192.t1 MTR_6g012535 27.354 223 128 7 58 265 15 218 8.25e-13 68.6
MS.gene90192.t1 MTR_3g099990 30.000 190 112 5 60 243 545 719 9.20e-13 72.4
MS.gene90192.t1 MTR_6g078080 25.796 314 203 10 59 359 382 678 9.56e-13 72.4
MS.gene90192.t1 MTR_3g437990 28.947 190 114 5 60 243 545 719 1.47e-12 71.6
MS.gene90192.t1 MTR_1g086150 27.413 259 163 13 59 304 401 647 2.69e-12 70.9
MS.gene90192.t1 MTR_7g091380 33.163 196 110 7 24 214 541 720 5.59e-12 70.1
MS.gene90192.t1 MTR_7g091380 26.733 202 126 7 49 243 1468 1654 3.27e-11 67.4
MS.gene90192.t1 MTR_7g091380 33.163 196 110 7 24 214 541 720 5.88e-12 70.1
MS.gene90192.t1 MTR_7g091380 26.733 202 126 7 49 243 1468 1654 3.10e-11 67.4
MS.gene90192.t1 MTR_7g091380 33.163 196 110 7 24 214 359 538 5.93e-12 69.7
MS.gene90192.t1 MTR_7g091380 26.733 202 126 7 49 243 1286 1472 3.02e-11 67.4
MS.gene90192.t1 MTR_7g091380 33.163 196 110 7 24 214 339 518 6.38e-12 69.7
MS.gene90192.t1 MTR_7g091380 26.733 202 126 7 49 243 1266 1452 2.97e-11 67.8
MS.gene90192.t1 MTR_1g086080 31.282 195 116 10 59 247 406 588 6.53e-12 69.7
MS.gene90192.t1 MTR_5g075955 28.194 227 127 8 57 269 367 571 7.12e-12 68.9
MS.gene90192.t1 MTR_3g093430 30.909 275 155 15 53 313 375 628 7.17e-12 69.3
MS.gene90192.t1 MTR_7g102070 33.862 189 101 10 68 247 1107 1280 1.00e-11 68.9
MS.gene90192.t1 MTR_3g080220 31.799 239 133 13 57 280 410 633 1.05e-11 68.9
MS.gene90192.t1 MTR_5g075955 28.194 227 127 8 57 269 479 683 1.27e-11 68.6
MS.gene90192.t1 MTR_2g018350 26.923 234 147 7 59 280 376 597 1.49e-11 68.6
MS.gene90192.t1 MTR_6g009090 33.333 186 102 9 70 247 404 575 1.70e-11 67.8
MS.gene90192.t1 MTR_1g063170 32.836 201 105 11 59 247 1072 1254 2.76e-11 67.8
MS.gene90192.t1 MTR_6g008820 28.854 253 150 11 70 309 377 612 2.85e-11 67.4
MS.gene90192.t1 MTR_6g034270 25.656 343 206 17 5 341 408 707 3.49e-11 67.4
MS.gene90192.t1 MTR_6g008820 28.854 253 150 11 70 309 247 482 3.86e-11 67.0
MS.gene90192.t1 MTR_6g008820 28.205 273 166 11 50 309 143 398 3.89e-11 67.0
MS.gene90192.t1 MTR_5g075960 27.273 220 138 6 57 269 481 685 4.00e-11 66.6
MS.gene90192.t1 MTR_3g086430 27.434 226 130 9 59 271 1018 1222 4.74e-11 67.0
MS.gene90192.t1 MTR_6g008820 28.854 253 150 11 70 309 55 290 5.50e-11 66.6
MS.gene90192.t1 MTR_6g009070 31.222 221 132 8 59 272 951 1158 6.48e-11 66.2
MS.gene90192.t1 MTR_6g009200 29.956 227 127 9 59 272 1037 1244 6.61e-11 66.2
MS.gene90192.t1 MTR_4g124000 27.519 258 143 10 31 276 379 604 7.36e-11 66.2
MS.gene90192.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 8.07e-11 66.2
MS.gene90192.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 8.39e-11 65.9
MS.gene90192.t1 MTR_0019s0020 25.564 266 168 9 5 269 541 777 8.40e-11 65.9
MS.gene90192.t1 MTR_6g008800 30.102 196 119 5 59 247 1024 1208 8.44e-11 65.9
MS.gene90192.t1 MTR_6g009110 29.464 224 132 8 59 272 1035 1242 9.37e-11 65.9
MS.gene90192.t1 MTR_6g009150 31.313 198 114 9 59 247 1034 1218 9.62e-11 65.9
MS.gene90192.t1 MTR_6g009030 30.102 196 119 5 59 247 1016 1200 9.91e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90192.t1 AT1G17840 52.705 647 279 6 37 672 50 680 0.0 633
MS.gene90192.t1 AT3G21090 45.630 675 329 12 12 669 1 654 0.0 580
MS.gene90192.t1 AT1G51500 44.086 651 335 9 33 669 20 655 0.0 538
MS.gene90192.t1 AT1G51460 41.592 666 340 10 32 669 5 649 6.62e-174 512
MS.gene90192.t1 AT2G28070 36.570 618 362 9 34 641 111 708 3.54e-130 401
MS.gene90192.t1 AT2G28070 36.570 618 362 9 34 641 111 708 3.54e-130 401
MS.gene90192.t1 AT3G55110 31.111 540 357 8 49 580 81 613 1.52e-79 268
MS.gene90192.t1 AT3G55130 30.435 552 348 9 52 580 92 630 1.31e-78 265
MS.gene90192.t1 AT2G13610 29.097 598 396 12 54 641 57 636 3.84e-78 262
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 5.35e-78 262
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 5.35e-78 262
MS.gene90192.t1 AT2G37360 31.066 544 343 9 56 580 130 660 8.95e-78 264
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 1.93e-77 262
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 1.93e-77 262
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 2.54e-77 262
MS.gene90192.t1 AT2G01320 31.366 593 364 17 11 586 44 610 2.91e-77 262
MS.gene90192.t1 AT3G53510 32.963 540 329 9 56 580 123 644 9.09e-77 261
MS.gene90192.t1 AT3G55100 31.157 536 340 11 57 580 49 567 2.74e-76 258
MS.gene90192.t1 AT3G55100 31.157 536 340 11 57 580 49 567 2.74e-76 258
MS.gene90192.t1 AT5G13580 30.514 603 367 11 1 579 57 631 1.60e-75 257
MS.gene90192.t1 AT3G55090 29.305 604 371 12 4 579 65 640 1.17e-72 249
MS.gene90192.t1 AT5G19410 27.598 587 373 14 59 635 66 610 1.89e-72 246
MS.gene90192.t1 AT5G19410 27.598 587 373 14 59 635 75 619 2.16e-72 246
MS.gene90192.t1 AT5G06530 30.964 591 357 16 20 580 139 708 1.42e-70 244
MS.gene90192.t1 AT5G06530 30.964 591 357 16 20 580 139 708 1.42e-70 244
MS.gene90192.t1 AT5G06530 32.276 536 327 13 35 546 155 678 2.14e-70 243
MS.gene90192.t1 AT2G01320 32.383 491 293 14 11 485 44 511 2.45e-68 233
MS.gene90192.t1 AT2G01320 32.383 491 293 14 11 485 44 511 2.45e-68 233
MS.gene90192.t1 AT1G53270 28.549 634 386 13 20 640 2 581 1.17e-67 233
MS.gene90192.t1 AT2G39350 29.710 552 349 11 55 579 105 644 6.01e-67 234
MS.gene90192.t1 AT4G25750 28.620 594 360 18 59 641 30 570 3.87e-66 228
MS.gene90192.t1 AT5G52860 29.005 593 369 15 53 641 38 582 1.10e-65 227
MS.gene90192.t1 AT5G06530 32.525 495 298 13 76 546 1 483 1.11e-64 222
MS.gene90192.t1 AT1G31770 29.202 589 383 14 54 635 76 637 1.43e-64 226
MS.gene90192.t1 AT4G27420 31.864 499 319 9 55 546 62 546 7.72e-62 218
MS.gene90192.t1 AT1G71960 30.407 615 371 22 52 641 76 658 6.67e-61 216
MS.gene90192.t1 AT3G25620 29.153 590 366 19 33 595 64 628 2.47e-60 214
MS.gene90192.t1 AT2G29940 27.193 570 365 11 31 573 813 1359 8.60e-55 203
MS.gene90192.t1 AT2G29940 25.469 640 401 15 58 647 174 787 5.84e-48 183
MS.gene90192.t1 AT4G15233 26.180 657 432 14 42 669 133 765 1.20e-54 203
MS.gene90192.t1 AT4G15233 26.930 583 375 17 23 585 768 1319 1.47e-47 181
MS.gene90192.t1 AT4G15233 26.389 648 423 15 42 657 71 696 5.08e-54 201
MS.gene90192.t1 AT4G15233 27.138 538 344 16 68 585 685 1194 2.88e-44 171
MS.gene90192.t1 AT4G15233 26.389 648 423 15 42 657 71 696 5.08e-54 201
MS.gene90192.t1 AT4G15233 27.138 538 344 16 68 585 685 1194 2.88e-44 171
MS.gene90192.t1 AT4G15233 25.481 675 432 14 42 669 133 783 8.72e-54 200
MS.gene90192.t1 AT4G15233 26.930 583 375 17 23 585 786 1337 1.60e-47 181
MS.gene90192.t1 AT4G15233 25.481 675 432 14 42 669 71 721 9.60e-54 200
MS.gene90192.t1 AT4G15233 26.930 583 375 17 23 585 724 1275 1.36e-47 182
MS.gene90192.t1 AT4G15233 25.481 675 432 14 42 669 71 721 9.60e-54 200
MS.gene90192.t1 AT4G15233 26.930 583 375 17 23 585 724 1275 1.36e-47 182
MS.gene90192.t1 AT4G15233 25.457 656 424 13 42 650 133 770 1.04e-53 200
MS.gene90192.t1 AT4G15233 26.863 577 367 17 23 577 786 1329 6.87e-46 176
MS.gene90192.t1 AT3G13220 29.485 563 342 18 57 594 104 636 1.60e-53 196
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 131 755 1.70e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 801 1336 1.37e-47 182
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 128 752 1.92e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 798 1333 1.28e-47 182
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 128 752 1.92e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 798 1333 1.28e-47 182
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 128 752 1.92e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 798 1333 1.28e-47 182
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 128 752 1.92e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 798 1333 1.28e-47 182
MS.gene90192.t1 AT4G15215 26.121 647 408 15 42 640 128 752 1.92e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 798 1333 1.28e-47 182
MS.gene90192.t1 AT4G15215 26.430 647 399 16 42 640 128 745 1.96e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 791 1326 1.30e-47 182
MS.gene90192.t1 AT4G15215 26.430 647 399 16 42 640 128 745 1.96e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 791 1326 1.30e-47 182
MS.gene90192.t1 AT4G15215 26.430 647 399 16 42 640 128 745 1.96e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 791 1326 1.30e-47 182
MS.gene90192.t1 AT4G15215 26.430 647 399 16 42 640 128 745 1.96e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 791 1326 1.30e-47 182
MS.gene90192.t1 AT4G15215 26.430 647 399 16 42 640 131 748 2.71e-51 193
MS.gene90192.t1 AT4G15215 26.148 566 369 14 33 579 794 1329 1.61e-47 181
MS.gene90192.t1 AT1G59870 27.580 533 341 13 51 567 886 1389 3.23e-51 192
MS.gene90192.t1 AT1G59870 25.118 633 399 16 58 640 185 792 1.64e-40 160
MS.gene90192.t1 AT4G15236 24.962 653 431 11 42 650 131 768 7.58e-51 191
MS.gene90192.t1 AT4G15236 27.027 592 377 18 16 585 777 1335 1.01e-48 185
MS.gene90192.t1 AT2G37280 26.301 692 429 20 14 650 104 769 2.30e-50 190
MS.gene90192.t1 AT2G37280 27.170 530 342 14 54 567 834 1335 2.04e-46 178
MS.gene90192.t1 AT2G37280 26.301 692 429 20 14 650 104 769 2.39e-50 190
MS.gene90192.t1 AT2G37280 27.639 521 330 13 33 530 809 1305 1.30e-45 176
MS.gene90192.t1 AT3G25620 36.196 326 188 9 33 343 64 384 4.38e-50 182
MS.gene90192.t1 AT3G53480 26.646 653 381 21 46 638 175 789 1.06e-49 188
MS.gene90192.t1 AT3G53480 25.122 617 389 17 15 590 816 1400 7.40e-45 173
MS.gene90192.t1 AT4G15233 25.333 675 424 15 42 669 133 774 1.08e-49 188
MS.gene90192.t1 AT4G15233 26.930 583 375 17 23 585 777 1328 1.71e-47 181
MS.gene90192.t1 AT1G15210 27.151 523 340 13 59 567 867 1362 2.20e-49 187
MS.gene90192.t1 AT1G15210 24.843 636 408 16 58 646 183 795 1.35e-39 157
MS.gene90192.t1 AT4G15230 25.194 643 415 14 42 638 134 756 1.19e-48 185
MS.gene90192.t1 AT4G15230 26.460 548 350 17 33 556 804 1322 2.26e-45 175
MS.gene90192.t1 AT3G16340 26.642 533 346 13 51 567 833 1336 1.44e-48 184
MS.gene90192.t1 AT3G16340 25.577 563 364 13 58 578 161 710 1.07e-37 151
MS.gene90192.t1 AT4G15230 25.116 645 413 14 42 638 55 677 1.49e-48 184
MS.gene90192.t1 AT4G15230 25.442 566 373 16 33 579 725 1260 1.74e-46 178
MS.gene90192.t1 AT3G16340 26.642 533 346 13 51 567 828 1331 1.57e-48 184
MS.gene90192.t1 AT3G16340 25.709 564 357 15 58 578 161 705 1.94e-36 147
MS.gene90192.t1 AT4G15230 25.116 645 413 14 42 638 134 756 1.81e-48 184
MS.gene90192.t1 AT4G15230 25.442 566 373 16 33 579 804 1339 2.06e-46 178
MS.gene90192.t1 AT4G15230 25.116 645 413 14 42 638 134 756 1.81e-48 184
MS.gene90192.t1 AT4G15230 25.442 566 373 16 33 579 804 1339 2.06e-46 178
MS.gene90192.t1 AT1G15520 27.073 591 378 17 13 574 796 1362 8.40e-48 182
MS.gene90192.t1 AT1G15520 24.920 626 407 14 58 640 168 773 2.64e-43 169
MS.gene90192.t1 AT2G37280 27.027 555 357 15 33 567 838 1364 2.74e-46 177
MS.gene90192.t1 AT2G37280 25.243 721 429 21 14 650 104 798 3.05e-45 174
MS.gene90192.t1 AT2G37280 27.170 530 342 14 54 567 676 1177 2.77e-46 177
MS.gene90192.t1 AT2G37280 26.190 630 389 17 71 650 8 611 2.21e-45 175
MS.gene90192.t1 AT1G15520 24.480 625 411 12 58 640 168 773 3.71e-43 168
MS.gene90192.t1 AT1G15520 28.571 483 293 16 13 467 796 1254 1.96e-38 154
MS.gene90192.t1 AT1G53390 36.981 265 154 6 37 298 507 761 1.55e-42 166
MS.gene90192.t1 AT2G36380 25.437 629 401 14 59 640 188 795 1.28e-41 163
MS.gene90192.t1 AT2G36380 25.142 529 353 13 49 559 869 1372 4.03e-38 152
MS.gene90192.t1 AT3G30842 28.687 495 295 15 44 506 826 1294 1.97e-41 163
MS.gene90192.t1 AT3G30842 25.627 558 348 15 58 564 160 701 2.11e-39 157
MS.gene90192.t1 AT2G37010 36.585 287 161 8 37 320 484 752 1.97e-41 162
MS.gene90192.t1 AT2G37010 36.585 287 161 8 37 320 484 752 1.97e-41 162
MS.gene90192.t1 AT2G26910 25.509 639 401 17 51 640 143 755 6.42e-41 161
MS.gene90192.t1 AT2G26910 24.578 533 366 9 51 566 837 1350 4.92e-40 159
MS.gene90192.t1 AT1G66950 25.394 634 395 14 59 640 190 797 5.66e-40 158
MS.gene90192.t1 AT1G66950 24.294 531 355 13 49 559 870 1373 3.75e-37 150
MS.gene90192.t1 AT5G60740 33.588 262 161 6 37 295 499 750 4.18e-33 137
MS.gene90192.t1 AT3G21080 34.722 144 79 4 510 648 106 239 6.24e-16 78.6
MS.gene90192.t1 AT5G61700 28.218 202 126 5 54 248 610 799 2.93e-14 77.0
MS.gene90192.t1 AT5G61700 28.218 202 126 5 54 248 610 799 2.93e-14 77.0
MS.gene90192.t1 AT3G47730 27.863 262 154 8 1 243 476 721 8.21e-14 75.9
MS.gene90192.t1 AT1G70610 27.059 255 154 9 53 295 285 519 1.93e-13 73.9
MS.gene90192.t1 AT5G61700 27.919 197 119 6 54 243 610 790 2.27e-13 74.3
MS.gene90192.t1 AT1G27940 30.412 194 119 6 59 247 388 570 2.53e-13 74.3
MS.gene90192.t1 AT1G27940 29.167 216 133 8 59 268 1021 1222 2.44e-11 67.8
MS.gene90192.t1 AT1G70610 27.059 255 154 9 53 295 466 700 3.00e-13 73.6
MS.gene90192.t1 AT5G39040 30.638 235 137 11 56 282 410 626 3.25e-13 73.6
MS.gene90192.t1 AT1G27940 30.412 194 119 6 59 247 174 356 3.42e-13 73.6
MS.gene90192.t1 AT1G27940 29.167 216 133 8 59 268 807 1008 2.47e-11 67.8
MS.gene90192.t1 AT4G33460 28.279 244 151 7 35 277 38 258 3.85e-13 70.9
MS.gene90192.t1 AT1G28010 30.412 194 119 7 59 247 389 571 5.67e-13 73.2
MS.gene90192.t1 AT1G28010 31.336 217 129 9 58 268 1022 1224 9.12e-11 65.9
MS.gene90192.t1 AT5G61690 30.366 191 110 7 60 243 548 722 7.49e-13 72.8
MS.gene90192.t1 AT5G61730 27.863 262 154 10 1 243 478 723 1.50e-12 71.6
MS.gene90192.t1 AT5G61730 30.890 191 109 7 60 243 539 713 2.25e-12 70.9
MS.gene90192.t1 AT2G41700 32.308 195 113 7 24 214 466 645 2.95e-12 70.9
MS.gene90192.t1 AT2G41700 26.633 199 124 6 52 243 1424 1607 4.19e-11 67.0
MS.gene90192.t1 AT3G47750 25.269 186 124 5 54 234 630 805 3.06e-12 70.5
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 3.69e-12 70.5
MS.gene90192.t1 AT3G47780 25.128 195 127 6 54 243 628 808 3.86e-12 70.5
MS.gene90192.t1 AT2G41700 32.308 195 113 7 24 214 536 715 3.95e-12 70.5
MS.gene90192.t1 AT2G41700 26.633 199 124 6 52 243 1466 1649 4.81e-11 67.0
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 4.07e-12 70.1
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 4.07e-12 70.1
MS.gene90192.t1 AT3G47790 25.405 185 125 4 54 234 482 657 4.74e-12 69.7
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 4.90e-12 70.1
MS.gene90192.t1 AT3G47790 25.405 185 125 4 54 234 601 776 5.21e-12 69.7
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 5.81e-12 69.7
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 5.81e-12 69.7
MS.gene90192.t1 AT2G47000 30.698 215 124 11 40 247 387 583 5.81e-12 69.7
MS.gene90192.t1 AT5G61740 25.000 236 153 8 13 243 427 643 6.08e-12 69.7
MS.gene90192.t1 AT3G47770 26.141 241 145 10 5 224 539 767 7.67e-12 69.3
MS.gene90192.t1 AT3G47790 25.773 194 127 5 54 243 601 781 8.15e-12 69.3
MS.gene90192.t1 AT4G28620 29.744 195 123 5 57 247 452 636 8.37e-12 68.9
MS.gene90192.t1 AT3G28390 32.178 202 117 10 70 262 375 565 9.10e-12 69.3
MS.gene90192.t1 AT3G28390 29.412 221 136 6 59 272 997 1204 1.02e-11 68.9
MS.gene90192.t1 AT3G47770 26.141 241 145 10 5 224 565 793 9.79e-12 68.9
MS.gene90192.t1 AT5G61740 26.190 210 135 7 13 217 532 726 1.15e-11 68.6
MS.gene90192.t1 AT5G61740 26.190 210 135 7 13 217 566 760 1.32e-11 68.6
MS.gene90192.t1 AT1G10680 31.351 185 107 9 70 247 389 560 1.49e-11 68.6
MS.gene90192.t1 AT3G28360 30.198 202 121 9 70 262 374 564 1.63e-11 68.6
MS.gene90192.t1 AT1G10680 31.351 185 107 9 70 247 389 560 1.66e-11 68.6
MS.gene90192.t1 AT5G61690 29.016 193 109 7 60 243 548 721 1.71e-11 68.2
MS.gene90192.t1 AT3G28380 32.020 203 118 10 69 262 386 577 1.95e-11 68.2
MS.gene90192.t1 AT3G28415 29.108 213 125 8 70 272 1004 1200 3.17e-11 67.4
MS.gene90192.t1 AT3G28415 29.108 213 125 8 70 272 1012 1208 3.43e-11 67.4
MS.gene90192.t1 AT4G25960 29.808 208 120 10 70 268 429 619 4.55e-11 67.0
MS.gene90192.t1 AT1G02530 29.091 220 138 9 57 271 383 589 5.83e-11 66.6
MS.gene90192.t1 AT3G47760 24.260 169 113 5 54 217 589 747 6.77e-11 66.2
MS.gene90192.t1 AT1G02530 29.091 220 138 9 57 271 383 589 7.22e-11 66.2
MS.gene90192.t1 AT3G47760 24.260 169 113 5 54 217 629 787 7.25e-11 66.2
MS.gene90192.t1 AT3G28345 31.188 202 119 9 70 262 387 577 8.22e-11 66.2
MS.gene90192.t1 AT3G47760 24.260 169 113 5 54 217 599 757 8.79e-11 65.9

Find 133 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAACTTGGAAAGATTTA+TGG 0.118017 4.2:+19472832 MS.gene90192:CDS
GTCTATAGTATTGTCTTTAA+AGG 0.148699 4.2:+19475350 MS.gene90192:CDS
ATGATCTTCCTAATCCATTT+TGG 0.156981 4.2:+19476441 MS.gene90192:CDS
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4.2:+19474255 MS.gene90192:CDS
ATTGAAATCATCAGCAAATA+TGG 0.242245 4.2:-19476203 None:intergenic
AACATAGGGTATTTCCAAAA+TGG 0.259735 4.2:-19476455 None:intergenic
AGCCACTGTCTTTAATGATT+TGG 0.262428 4.2:+19475604 MS.gene90192:CDS
TTCGCGATCTTGGCTATTAT+TGG 0.275943 4.2:+19475543 MS.gene90192:CDS
TTTAATTTCTTGGTTTCTTT+CGG 0.280423 4.2:-19475310 None:intergenic
TACCCTCCAGGTCTTCAAAA+AGG 0.282844 4.2:+19476248 MS.gene90192:CDS
CTTTCAATCTCTAGGATATT+AGG 0.283672 4.2:-19472750 None:intergenic
ATGATTCCCATTAGAAAATC+AGG 0.291192 4.2:-19476359 None:intergenic
TTTGAACGTGAAAGACTAAA+TGG 0.294897 4.2:+19476131 MS.gene90192:CDS
AATAGCTTCCTTGGACAAAA+AGG 0.296864 4.2:+19474404 MS.gene90192:CDS
CTGATGATTTCAATCATTCC+TGG 0.299780 4.2:+19476212 MS.gene90192:CDS
AAGACAAAAGACAAAGATTA+TGG 0.307904 4.2:-19474491 None:intergenic
TGAAAGCAAATCAATTCTTC+AGG 0.309362 4.2:+19472887 MS.gene90192:CDS
CTTAACTTGGAAAGATTTAT+GGG 0.314150 4.2:+19472833 MS.gene90192:CDS
CATGTTCACAAAAGATCTTC+TGG 0.320056 4.2:-19475519 None:intergenic
TTGGCTATAATGGGTCCTTC+TGG 0.326290 4.2:+19472942 MS.gene90192:CDS
AAGAATTGATTTGCTTTCAT+TGG 0.326703 4.2:-19472883 None:intergenic
TAAAAGTAATGGCTCAATTC+AGG 0.332362 4.2:+19475628 MS.gene90192:CDS
TTTCTAATGGGAATCATAAC+TGG 0.337952 4.2:+19476365 MS.gene90192:CDS
TGCAAAGCCAGGTCAGCTTT+TGG 0.346322 4.2:+19472923 MS.gene90192:CDS
CACGGCTTCTTTAACGGTTA+AGG 0.348299 4.2:-19474121 None:intergenic
AGAAGGGAGTTTGCTTAACT+TGG 0.354423 4.2:+19472820 MS.gene90192:CDS
GGGTATTTCCAAAATGGATT+AGG 0.357240 4.2:-19476449 None:intergenic
AAATTTGAAAGAGATGAAAT+TGG 0.358441 4.2:+19476539 MS.gene90192:CDS
TACTCAAAGTGGGTTGATCT+TGG 0.362481 4.2:+19476638 MS.gene90192:CDS
AACAAACAAGCATTGGCTTA+TGG 0.366572 4.2:+19473883 MS.gene90192:CDS
GTGAACATGTTTCGCGATCT+TGG 0.368361 4.2:+19475533 MS.gene90192:CDS
TGTTCTATATTGCCTTTCAT+AGG 0.369421 4.2:+19476474 MS.gene90192:CDS
GATGCAATCAACACAAGAAT+TGG 0.372547 4.2:+19474237 MS.gene90192:CDS
GATATCAATTGCTTGTTCAA+TGG 0.373926 4.2:-19475265 None:intergenic
GGTTCAAACACAAGACAATC+AGG 0.375821 4.2:+19473841 MS.gene90192:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4.2:+19474264 MS.gene90192:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.382630 4.2:-19474458 None:intergenic
ATAGTACACGGCTTCTTTAA+CGG 0.384633 4.2:-19474127 None:intergenic
ATATGTATTTCAGGGAGATT+AGG 0.390555 4.2:+19473820 MS.gene90192:intron
GGTGTTACGGCATATGTAAT+TGG 0.394392 4.2:+19476161 MS.gene90192:CDS
CACCAATGGTCATGAAAGTT+AGG 0.401646 4.2:-19475775 None:intergenic
ATAACTGGTGCTGGAATTCA+AGG 0.410331 4.2:+19476380 MS.gene90192:CDS
TATGAAAAGAATAGCTTCCT+TGG 0.410861 4.2:+19474395 MS.gene90192:CDS
TGGTGGATTCCCTTCTTATG+TGG 0.415254 4.2:+19475793 MS.gene90192:CDS
GGTTGATCTTGGAGTATTGT+TGG 0.424413 4.2:+19476649 MS.gene90192:CDS
GTGACTGTTTCTGCTTCAAC+AGG 0.427001 4.2:+19472855 MS.gene90192:CDS
GGCTATTATTGGTTACGCCT+TGG 0.429860 4.2:+19475554 MS.gene90192:CDS
GTTGATCTTGGAGTATTGTT+GGG 0.434086 4.2:+19476650 MS.gene90192:CDS
CACTTATGTCGGTGTCTCCT+AGG 0.440631 4.2:+19476747 MS.gene90192:CDS
ATGGGAATCATAACTGGTGC+TGG 0.440680 4.2:+19476371 MS.gene90192:CDS
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4.2:+19474265 MS.gene90192:CDS
TCAGGCAAAACAGTTTACTT+TGG 0.455818 4.2:+19474513 MS.gene90192:CDS
TTGATGGATTGAGGCAATAA+TGG 0.456241 4.2:-19474442 None:intergenic
TTCCTAACTTTCATGACCAT+TGG 0.456447 4.2:+19475773 MS.gene90192:CDS
GAAAGACTAAATGGACACTA+TGG 0.458475 4.2:+19476140 MS.gene90192:CDS
AATGATTTGGATAAAAGTAA+TGG 0.458739 4.2:+19475617 MS.gene90192:CDS
AAATGGATTAGGAAGATCAT+TGG 0.460933 4.2:-19476438 None:intergenic
TTGTGTCAGGTAATTGAAGT+TGG 0.471985 4.2:-19474155 None:intergenic
TCTTCATTAGACATTGTGTC+AGG 0.473825 4.2:-19474168 None:intergenic
TCAATTCTTCAGGGTCTGAC+TGG 0.475591 4.2:+19472897 MS.gene90192:CDS
GAGATGGATTTAGCAGAGAC+TGG 0.477488 4.2:+19475234 MS.gene90192:CDS
CTAACTTTCATGACCATTGG+TGG 0.478663 4.2:+19475776 MS.gene90192:CDS
TTCATGTCCTCCACATAAGA+AGG 0.479736 4.2:-19475803 None:intergenic
ATAATGGGTCCTTCTGGTTG+TGG 0.481002 4.2:+19472948 MS.gene90192:CDS
GATGAAATTGGTGGTGGTGG+TGG 0.481966 4.2:+19476551 MS.gene90192:CDS
GATGAATGGAGGAGAAGAGA+AGG 0.482193 4.2:+19472803 MS.gene90192:CDS
GACATAAGTGACATAACAAT+AGG 0.486627 4.2:-19476734 None:intergenic
TAGGCAAACAAGACAAGTCT+TGG 0.487764 4.2:+19476766 MS.gene90192:CDS
ACCTCAGATGCAGCAGAAGC+AGG 0.491581 4.2:-19474537 None:intergenic
ACACTTCTTGATGCTTTAGC+AGG 0.497837 4.2:+19472978 MS.gene90192:CDS
AGTACTAGGTTGATGGATTG+AGG 0.499081 4.2:-19474451 None:intergenic
CAAGGGATTATGATGTTGGC+AGG 0.499670 4.2:+19476398 MS.gene90192:CDS
AAGACTTGTCTTGTTTGCCT+AGG 0.501633 4.2:-19476764 None:intergenic
TGAAAGGCAATATAGAACAT+AGG 0.502086 4.2:-19476470 None:intergenic
GAAAGCAAATCAATTCTTCA+GGG 0.502763 4.2:+19472888 MS.gene90192:CDS
AATGGATTAGGAAGATCATT+GGG 0.503000 4.2:-19476437 None:intergenic
AAATGGACACTATGGTGTTA+CGG 0.505004 4.2:+19476148 MS.gene90192:CDS
GGATCACTCAATTACATTAG+TGG 0.505948 4.2:+19476575 MS.gene90192:CDS
TATTAGGCACAGATGAAAGA+AGG 0.506902 4.2:-19472734 None:intergenic
TTCTTATGTGGAGGACATGA+AGG 0.508636 4.2:+19475805 MS.gene90192:CDS
GCCATAGCATATTACCCTCC+AGG 0.509466 4.2:+19476236 MS.gene90192:CDS
AATTCAAGGGATTATGATGT+TGG 0.510525 4.2:+19476394 MS.gene90192:CDS
GGGTAATATGCTATGGCTCC+AGG 0.511427 4.2:-19476230 None:intergenic
CTCTTGCGCTTTCAATCTCT+AGG 0.511830 4.2:-19472758 None:intergenic
AACACAAGAATTGGAGGGTG+GGG 0.512629 4.2:+19474246 MS.gene90192:CDS
ACCTGCTTCTGCTGCATCTG+AGG 0.514345 4.2:+19474536 MS.gene90192:CDS
GAAAGGCAATATAGAACATA+GGG 0.518508 4.2:-19476469 None:intergenic
ATGAATGGAGGAGAAGAGAA+GGG 0.524895 4.2:+19472804 MS.gene90192:CDS
AGAGATGAAATTGGTGGTGG+TGG 0.529076 4.2:+19476548 MS.gene90192:CDS
TGGATTCCCTTCTTATGTGG+AGG 0.531042 4.2:+19475796 MS.gene90192:CDS
CAATGGCAACAAACAAGCAT+TGG 0.531389 4.2:+19473876 MS.gene90192:CDS
GATTGAAAGCGCAAGAGAAG+AGG 0.532796 4.2:+19472764 MS.gene90192:CDS
TATACAACGTCTATATGTAA+AGG 0.536262 4.2:-19476806 None:intergenic
TCTTATAAGAATGAGTTTGA+AGG 0.538328 4.2:+19476512 MS.gene90192:CDS
ACCTGGAGGGTAATATGCTA+TGG 0.542119 4.2:-19476237 None:intergenic
TATTGTTATGTCACTTATGT+CGG 0.544402 4.2:+19476736 MS.gene90192:CDS
AGCTGCACTATCAAGTCCAC+TGG 0.547420 4.2:-19474361 None:intergenic
TAGATATGAGTTACTCAAAG+TGG 0.553373 4.2:+19476627 MS.gene90192:CDS
CCTTGGCATATATATTGCGT+TGG 0.554763 4.2:+19475571 MS.gene90192:CDS
GCAATCAACACAAGAATTGG+AGG 0.560697 4.2:+19474240 MS.gene90192:CDS
TGTGTCAGGTAATTGAAGTT+GGG 0.561591 4.2:-19474154 None:intergenic
ATCCAAATCATTAAAGACAG+TGG 0.564200 4.2:-19475606 None:intergenic
CAACACAAGAATTGGAGGGT+GGG 0.564826 4.2:+19474245 MS.gene90192:CDS
CTGACTGGTTATGCAAAGCC+AGG 0.567099 4.2:+19472912 MS.gene90192:CDS
ATTATAGCCAAAAGCTGACC+TGG 0.570027 4.2:-19472930 None:intergenic
ATATGTAAAGGAGTGGCACT+AGG 0.573329 4.2:-19476794 None:intergenic
TTGAAAAGCATACCTATGAA+AGG 0.573338 4.2:-19476486 None:intergenic
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4.2:+19474266 MS.gene90192:CDS
TTTGAAAGAGATGAAATTGG+TGG 0.584768 4.2:+19476542 MS.gene90192:CDS
TGATTCCCATTAGAAAATCA+GGG 0.592259 4.2:-19476358 None:intergenic
GAAAGCGCAAGAGAAGAGGT+AGG 0.592493 4.2:+19472768 MS.gene90192:CDS
GAAAGAGATGAAATTGGTGG+TGG 0.595546 4.2:+19476545 MS.gene90192:CDS
TTTACTTAAAACTATAAACA+AGG 0.600618 4.2:+19474699 MS.gene90192:CDS
TCAATGTTAGGATATTGAGA+TGG 0.603713 4.2:+19475218 MS.gene90192:intron
AGATATGAGTTACTCAAAGT+GGG 0.605112 4.2:+19476628 MS.gene90192:CDS
GTTCAAACACAAGACAATCA+GGG 0.607925 4.2:+19473842 MS.gene90192:CDS
TTTCTTGATGAACCAACCAG+TGG 0.612742 4.2:+19474345 MS.gene90192:CDS
ATTAGGCACAGATGAAAGAA+GGG 0.612796 4.2:-19472733 None:intergenic
TAAGAACTAAGCACTGATTG+AGG 0.623135 4.2:-19475496 None:intergenic
GCACTATCAAGTCCACTGGT+TGG 0.624936 4.2:-19474357 None:intergenic
CCAACGCAATATATATGCCA+AGG 0.625218 4.2:-19475571 None:intergenic
ATGAAGAATATGAGCTCACA+AGG 0.626092 4.2:-19475287 None:intergenic
GGGATTATGATGTTGGCAGG+TGG 0.630683 4.2:+19476401 MS.gene90192:CDS
TTCAAACACAAGACAATCAG+GGG 0.633055 4.2:+19473843 MS.gene90192:CDS
TCATGTCCTCCACATAAGAA+GGG 0.633774 4.2:-19475802 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4.2:+19474244 MS.gene90192:CDS
AGCATTGGCTTATGGAACCT+CGG 0.634970 4.2:+19473891 MS.gene90192:CDS
AACGTCTATATGTAAAGGAG+TGG 0.644315 4.2:-19476801 None:intergenic
AAGTTGGGCTGAATAGTACA+CGG 0.665709 4.2:-19474139 None:intergenic
CAATCAACACAAGAATTGGA+GGG 0.667741 4.2:+19474241 MS.gene90192:CDS
ATAAGAAGGGAATCCACCAA+TGG 0.674842 4.2:-19475789 None:intergenic
TAACTGGTGCTGGAATTCAA+GGG 0.675155 4.2:+19476381 MS.gene90192:CDS
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4.2:+19474267 MS.gene90192:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATTTATATACAAATTAT+TGG + chr4.2:19473655-19473674 MS.gene90192:intron 10.0%
!! TATATAATTGAAAATTAACA+TGG - chr4.2:19474579-19474598 None:intergenic 10.0%
!!! ATTATTTTTATATGTATTTC+AGG + chr4.2:19473811-19473830 MS.gene90192:intron 10.0%
!!! TTATTTTTATATGTATTTCA+GGG + chr4.2:19473812-19473831 MS.gene90192:intron 10.0%
!! AAACAGAATTAATTACTAAA+TGG - chr4.2:19474612-19474631 None:intergenic 15.0%
!! TTTACTTAAAACTATAAACA+AGG + chr4.2:19474699-19474718 MS.gene90192:CDS 15.0%
!!! ATACTTCATTTTTAATTTCT+TGG - chr4.2:19475323-19475342 None:intergenic 15.0%
!!! CACTAAATTATTGTTTTATT+CGG + chr4.2:19476070-19476089 MS.gene90192:intron 15.0%
!!! TATAGTTTTAAGTAAATGAT+CGG - chr4.2:19474695-19474714 None:intergenic 15.0%
!! AAATTTGAAAGAGATGAAAT+TGG + chr4.2:19476539-19476558 MS.gene90192:CDS 20.0%
!! GCAAATATATATTGAATGAA+TGG + chr4.2:19475867-19475886 MS.gene90192:intron 20.0%
!! GTTGAATCTTGAATTATTTA+AGG + chr4.2:19475025-19475044 MS.gene90192:intron 20.0%
!! TTATATACAAATTATTGGGT+GGG + chr4.2:19473660-19473679 MS.gene90192:intron 20.0%
!! TTGAAATATGTTTCAATGTT+AGG + chr4.2:19475206-19475225 MS.gene90192:intron 20.0%
!! TTTATATACAAATTATTGGG+TGG + chr4.2:19473659-19473678 MS.gene90192:intron 20.0%
!!! AATGATTTGGATAAAAGTAA+TGG + chr4.2:19475617-19475636 MS.gene90192:CDS 20.0%
!!! AATTTGGTTTTAAACTAAGA+AGG + chr4.2:19473458-19473477 MS.gene90192:intron 20.0%
!!! ATATTGACATGAAATTTTGA+TGG + chr4.2:19475426-19475445 MS.gene90192:intron 20.0%
!!! ATGAACTTTAAAACATAGTA+AGG - chr4.2:19473216-19473235 None:intergenic 20.0%
!!! ATTTGGTTTTAAACTAAGAA+GGG + chr4.2:19473459-19473478 MS.gene90192:intron 20.0%
!!! ATTTTGTATATTGTTTCTCA+AGG + chr4.2:19473114-19473133 MS.gene90192:intron 20.0%
!!! CATATGCTATTAATTTGTAT+AGG + chr4.2:19476106-19476125 MS.gene90192:intron 20.0%
!!! CTACAATTTGTTTTTATTGA+AGG - chr4.2:19473936-19473955 None:intergenic 20.0%
!!! GATTTTACAATAAGAGAAAT+GGG + chr4.2:19474207-19474226 MS.gene90192:CDS 20.0%
!!! TAAATTTAGCTCAAATTTAG+AGG - chr4.2:19475379-19475398 None:intergenic 20.0%
!!! TATTGACATGAAATTTTGAT+GGG + chr4.2:19475427-19475446 MS.gene90192:intron 20.0%
!!! TGATTTTACAATAAGAGAAA+TGG + chr4.2:19474206-19474225 MS.gene90192:CDS 20.0%
!!! TGTGTTTTTAATTCTTAAAC+AGG + chr4.2:19473556-19473575 MS.gene90192:intron 20.0%
!!! TTACTATGTTTTAAAGTTCA+TGG + chr4.2:19473215-19473234 MS.gene90192:intron 20.0%
!!! TTTAATTTCTTGGTTTCTTT+CGG - chr4.2:19475313-19475332 None:intergenic 20.0%
!!! TTTAGATTTTATATATACCG+AGG - chr4.2:19473911-19473930 None:intergenic 20.0%
! AAGACAAAAGACAAAGATTA+TGG - chr4.2:19474494-19474513 None:intergenic 25.0%
! ACAAAGTTGACATAAAAACA+TGG - chr4.2:19474968-19474987 None:intergenic 25.0%
! AGGTCAGTTAATGTAATATA+AGG - chr4.2:19475666-19475685 None:intergenic 25.0%
! ATTGAAATCATCAGCAAATA+TGG - chr4.2:19476206-19476225 None:intergenic 25.0%
! CCATGATACTAAAAAAAAGA+AGG - chr4.2:19474783-19474802 None:intergenic 25.0%
! GAAAAACATGTGTTTATCAA+AGG - chr4.2:19473300-19473319 None:intergenic 25.0%
! GCTACATATTACTAGTAATT+TGG + chr4.2:19473442-19473461 MS.gene90192:intron 25.0%
! GTCTATAGTATTGTCTTTAA+AGG + chr4.2:19475350-19475369 MS.gene90192:CDS 25.0%
! TAATATGTATATGTGATCAC+AGG + chr4.2:19474065-19474084 MS.gene90192:intron 25.0%
! TATACAACGTCTATATGTAA+AGG - chr4.2:19476809-19476828 None:intergenic 25.0%
! TCTTATAAGAATGAGTTTGA+AGG + chr4.2:19476512-19476531 MS.gene90192:CDS 25.0%
! TGACAAAATTCAAATCTCTT+CGG + chr4.2:19473378-19473397 MS.gene90192:intron 25.0%
! TGTTGAAATAGTAAGTATGT+TGG - chr4.2:19473078-19473097 None:intergenic 25.0%
! TTCAAAGCAAAAAACTACAT+TGG - chr4.2:19474640-19474659 None:intergenic 25.0%
!! AAAGTCAAACTTTTACCAAT+GGG - chr4.2:19473347-19473366 None:intergenic 25.0%
!! AGTTCATAACTTTTGTGAAT+TGG + chr4.2:19475928-19475947 MS.gene90192:intron 25.0%
!! ATTTTCTTGTCTAATGTTAG+TGG + chr4.2:19476304-19476323 MS.gene90192:CDS 25.0%
!! CTTAACTTGGAAAGATTTAT+GGG + chr4.2:19472833-19472852 MS.gene90192:CDS 25.0%
!! TAAAGTCAAACTTTTACCAA+TGG - chr4.2:19473348-19473367 None:intergenic 25.0%
!! TATTGTTATGTCACTTATGT+CGG + chr4.2:19476736-19476755 MS.gene90192:CDS 25.0%
!!! AAGAATTGATTTGCTTTCAT+TGG - chr4.2:19472886-19472905 None:intergenic 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+CGG + chr4.2:19474640-19474659 MS.gene90192:intron 25.0%
!!! CCTTCTTTTTTTTAGTATCA+TGG + chr4.2:19474780-19474799 MS.gene90192:intron 25.0%
!!! GTTTTTAATTCTTAAACAGG+AGG + chr4.2:19473559-19473578 MS.gene90192:intron 25.0%
!!! TATAAACAAGGATTTTGATC+AGG + chr4.2:19474711-19474730 MS.gene90192:CDS 25.0%
!!! TGGCTTCTATTTCATTTTTT+TGG + chr4.2:19473242-19473261 MS.gene90192:intron 25.0%
!!! TGTTTTTCTGAAGAATTTGT+CGG + chr4.2:19473312-19473331 MS.gene90192:intron 25.0%
!!! TTGTTTTATTCGGTCTTTTA+TGG + chr4.2:19476080-19476099 MS.gene90192:intron 25.0%
AAAAACCAGTTAAAACCACA+TGG - chr4.2:19473526-19473545 None:intergenic 30.0%
AAGTTAGTTATTTGCATGCA+TGG - chr4.2:19473020-19473039 None:intergenic 30.0%
AATCGTTCAAAATTATCCCT+CGG + chr4.2:19475976-19475995 MS.gene90192:intron 30.0%
AATTCAAGGGATTATGATGT+TGG + chr4.2:19476394-19476413 MS.gene90192:CDS 30.0%
ACAAAAAGGATGGAATTCAA+AGG + chr4.2:19474418-19474437 MS.gene90192:CDS 30.0%
ACATACAAGAAAAAACATGC+TGG + chr4.2:19475470-19475489 MS.gene90192:CDS 30.0%
AGATATGAGTTACTCAAAGT+GGG + chr4.2:19476628-19476647 MS.gene90192:CDS 30.0%
AGGAAGTTATATATAGCAGT+TGG - chr4.2:19473043-19473062 None:intergenic 30.0%
AGTTGAAAAACTTCAGTACT+AGG - chr4.2:19474468-19474487 None:intergenic 30.0%
AGTTGACATAAAAACATGGT+TGG - chr4.2:19474964-19474983 None:intergenic 30.0%
ATATGTATTTCAGGGAGATT+AGG + chr4.2:19473820-19473839 MS.gene90192:intron 30.0%
ATCCAAATCATTAAAGACAG+TGG - chr4.2:19475609-19475628 None:intergenic 30.0%
ATGATTCCCATTAGAAAATC+AGG - chr4.2:19476362-19476381 None:intergenic 30.0%
ATGGTTGGATACAAAAATGT+AGG - chr4.2:19474949-19474968 None:intergenic 30.0%
GAAAGCAAATCAATTCTTCA+GGG + chr4.2:19472888-19472907 MS.gene90192:CDS 30.0%
GAAAGGCAATATAGAACATA+GGG - chr4.2:19476472-19476491 None:intergenic 30.0%
GAAGATAGTAGCTAAACTTA+AGG - chr4.2:19475686-19475705 None:intergenic 30.0%
GACATAAGTGACATAACAAT+AGG - chr4.2:19476737-19476756 None:intergenic 30.0%
GATATCAATTGCTTGTTCAA+TGG - chr4.2:19475268-19475287 None:intergenic 30.0%
GATTATCAGAATTCACAATG+TGG - chr4.2:19474902-19474921 None:intergenic 30.0%
TAAAAGTAATGGCTCAATTC+AGG + chr4.2:19475628-19475647 MS.gene90192:CDS 30.0%
TAGATATGAGTTACTCAAAG+TGG + chr4.2:19476627-19476646 MS.gene90192:CDS 30.0%
TATGAAAAGAATAGCTTCCT+TGG + chr4.2:19474395-19474414 MS.gene90192:CDS 30.0%
TCAATGTTAGGATATTGAGA+TGG + chr4.2:19475218-19475237 MS.gene90192:intron 30.0%
TCATCAAGAAAAAGAAGTCT+GGG - chr4.2:19474336-19474355 None:intergenic 30.0%
TCTTCGGTCGTAAAATAAAT+AGG + chr4.2:19473394-19473413 MS.gene90192:intron 30.0%
TGAAAGCAAATCAATTCTTC+AGG + chr4.2:19472887-19472906 MS.gene90192:CDS 30.0%
TGAAAGGCAATATAGAACAT+AGG - chr4.2:19476473-19476492 None:intergenic 30.0%
TGATTCCCATTAGAAAATCA+GGG - chr4.2:19476361-19476380 None:intergenic 30.0%
TGCAAAATAGATAGACACTA+GGG - chr4.2:19474873-19474892 None:intergenic 30.0%
TGTTCTATATTGCCTTTCAT+AGG + chr4.2:19476474-19476493 MS.gene90192:CDS 30.0%
TTCATCAAGAAAAAGAAGTC+TGG - chr4.2:19474337-19474356 None:intergenic 30.0%
TTTCTAATGGGAATCATAAC+TGG + chr4.2:19476365-19476384 MS.gene90192:CDS 30.0%
TTTGAAAGAGATGAAATTGG+TGG + chr4.2:19476542-19476561 MS.gene90192:CDS 30.0%
TTTGAACGTGAAAGACTAAA+TGG + chr4.2:19476131-19476150 MS.gene90192:CDS 30.0%
! AACATAGGGTATTTCCAAAA+TGG - chr4.2:19476458-19476477 None:intergenic 30.0%
! AATCTTTGTCTTTTGTCTTC+AGG + chr4.2:19474495-19474514 MS.gene90192:CDS 30.0%
! ATGATCTTCCTAATCCATTT+TGG + chr4.2:19476441-19476460 MS.gene90192:CDS 30.0%
! ATTGTCCCTGATTTTCTAAT+GGG + chr4.2:19476353-19476372 MS.gene90192:CDS 30.0%
! GCTTAACTTGGAAAGATTTA+TGG + chr4.2:19472832-19472851 MS.gene90192:CDS 30.0%
! TTGAAAAGCATACCTATGAA+AGG - chr4.2:19476489-19476508 None:intergenic 30.0%
! TTTCATAGGTATGCTTTTCA+AGG + chr4.2:19476488-19476507 MS.gene90192:CDS 30.0%
!! AAATGGATTAGGAAGATCAT+TGG - chr4.2:19476441-19476460 None:intergenic 30.0%
!! AATGGATTAGGAAGATCATT+GGG - chr4.2:19476440-19476459 None:intergenic 30.0%
!! CTTTCAATCTCTAGGATATT+AGG - chr4.2:19472753-19472772 None:intergenic 30.0%
!! GAAATTTTGATGGGTGTTTT+AGG + chr4.2:19475436-19475455 MS.gene90192:intron 30.0%
!! GTTTTAAGTAAATGATCGGA+TGG - chr4.2:19474691-19474710 None:intergenic 30.0%
!! TAGTAAGTATGTTGGTGATT+TGG - chr4.2:19473070-19473089 None:intergenic 30.0%
!! TATGTTGGTGATTTGGATTT+AGG - chr4.2:19473063-19473082 None:intergenic 30.0%
!!! CTAATTTTGCATGTCACTTT+TGG + chr4.2:19475705-19475724 MS.gene90192:intron 30.0%
!!! TGTGGTTTTAACTGGTTTTT+AGG + chr4.2:19473526-19473545 MS.gene90192:intron 30.0%
AACGTCTATATGTAAAGGAG+TGG - chr4.2:19476804-19476823 None:intergenic 35.0%
AAGTCAAAACTACTTCCATG+TGG + chr4.2:19473508-19473527 MS.gene90192:intron 35.0%
AATAGCTTCCTTGGACAAAA+AGG + chr4.2:19474404-19474423 MS.gene90192:CDS 35.0%
AGCCACTGTCTTTAATGATT+TGG + chr4.2:19475604-19475623 MS.gene90192:CDS 35.0%
ATAGTACACGGCTTCTTTAA+CGG - chr4.2:19474130-19474149 None:intergenic 35.0%
ATGAAACAAAGCACAATCTG+TGG + chr4.2:19473693-19473712 MS.gene90192:intron 35.0%
ATGAAGAATATGAGCTCACA+AGG - chr4.2:19475290-19475309 None:intergenic 35.0%
ATTAGGCACAGATGAAAGAA+GGG - chr4.2:19472736-19472755 None:intergenic 35.0%
ATTCTCGAAGTTGTAAGCAT+CGG + chr4.2:19475898-19475917 MS.gene90192:intron 35.0%
CAATCAACACAAGAATTGGA+GGG + chr4.2:19474241-19474260 MS.gene90192:CDS 35.0%
CATGTTCACAAAAGATCTTC+TGG - chr4.2:19475522-19475541 None:intergenic 35.0%
CTGATGATTTCAATCATTCC+TGG + chr4.2:19476212-19476231 MS.gene90192:CDS 35.0%
GAAAGACTAAATGGACACTA+TGG + chr4.2:19476140-19476159 MS.gene90192:CDS 35.0%
GATGCAATCAACACAAGAAT+TGG + chr4.2:19474237-19474256 MS.gene90192:CDS 35.0%
GCATCAAAAAAGATGAATGG+AGG + chr4.2:19472792-19472811 MS.gene90192:CDS 35.0%
GGATCACTCAATTACATTAG+TGG + chr4.2:19476575-19476594 MS.gene90192:CDS 35.0%
GTGCAAAATAGATAGACACT+AGG - chr4.2:19474874-19474893 None:intergenic 35.0%
GTTCAAACACAAGACAATCA+GGG + chr4.2:19473842-19473861 MS.gene90192:CDS 35.0%
TATTAGGCACAGATGAAAGA+AGG - chr4.2:19472737-19472756 None:intergenic 35.0%
TCAGGCAAAACAGTTTACTT+TGG + chr4.2:19474513-19474532 MS.gene90192:CDS 35.0%
TCTTCATTAGACATTGTGTC+AGG - chr4.2:19474171-19474190 None:intergenic 35.0%
TGTGTCAGGTAATTGAAGTT+GGG - chr4.2:19474157-19474176 None:intergenic 35.0%
TTCAAACACAAGACAATCAG+GGG + chr4.2:19473843-19473862 MS.gene90192:CDS 35.0%
TTCCTAACTTTCATGACCAT+TGG + chr4.2:19475773-19475792 MS.gene90192:CDS 35.0%
TTGTGTCAGGTAATTGAAGT+TGG - chr4.2:19474158-19474177 None:intergenic 35.0%
! AAACTTCAGTACTAGGTTGA+TGG - chr4.2:19474461-19474480 None:intergenic 35.0%
! AAATGGACACTATGGTGTTA+CGG + chr4.2:19476148-19476167 MS.gene90192:CDS 35.0%
! AATTCCATCCTTTTTGTCCA+AGG - chr4.2:19474415-19474434 None:intergenic 35.0%
! ATATTTCCGACTTGTATCGA+AGG - chr4.2:19474816-19474835 None:intergenic 35.0%
! CATTGTCCCTGATTTTCTAA+TGG + chr4.2:19476352-19476371 MS.gene90192:CDS 35.0%
! GGAGCATCAAAAAAGATGAA+TGG + chr4.2:19472789-19472808 MS.gene90192:CDS 35.0%
! GGGTATTTCCAAAATGGATT+AGG - chr4.2:19476452-19476471 None:intergenic 35.0%
!! AACAAACAAGCATTGGCTTA+TGG + chr4.2:19473883-19473902 MS.gene90192:CDS 35.0%
!! AATGATCGGATGGATTTTGT+AGG - chr4.2:19474681-19474700 None:intergenic 35.0%
!! ATGATCGGATGGATTTTGTA+GGG - chr4.2:19474680-19474699 None:intergenic 35.0%
!! GTTGATCTTGGAGTATTGTT+GGG + chr4.2:19476650-19476669 MS.gene90192:CDS 35.0%
!! TAAGAACTAAGCACTGATTG+AGG - chr4.2:19475499-19475518 None:intergenic 35.0%
!! TCAAATCCTTTTTGAAGACC+TGG - chr4.2:19476257-19476276 None:intergenic 35.0%
!! TTGATGGATTGAGGCAATAA+TGG - chr4.2:19474445-19474464 None:intergenic 35.0%
!!! GTTTTAAAGTTCATGGCTGA+TGG + chr4.2:19473222-19473241 MS.gene90192:intron 35.0%
!!! TACTTCCATGTGGTTTTAAC+TGG + chr4.2:19473518-19473537 MS.gene90192:intron 35.0%
!!! TCACTTTTGGTTTCCTTTTC+AGG + chr4.2:19475718-19475737 MS.gene90192:intron 35.0%
!!! TCAGGGGATATTTTGATCAA+TGG + chr4.2:19473859-19473878 MS.gene90192:CDS 35.0%
AAGTTGGGCTGAATAGTACA+CGG - chr4.2:19474142-19474161 None:intergenic 40.0%
ACACTTCTTGATGCTTTAGC+AGG + chr4.2:19472978-19472997 MS.gene90192:CDS 40.0%
AGTGAACCTCTATCCTGAAA+AGG - chr4.2:19475734-19475753 None:intergenic 40.0%
ATAAGAAGGGAATCCACCAA+TGG - chr4.2:19475792-19475811 None:intergenic 40.0%
ATATGTAAAGGAGTGGCACT+AGG - chr4.2:19476797-19476816 None:intergenic 40.0%
ATGAATGGAGGAGAAGAGAA+GGG + chr4.2:19472804-19472823 MS.gene90192:CDS 40.0%
ATTATAGCCAAAAGCTGACC+TGG - chr4.2:19472933-19472952 None:intergenic 40.0%
CAATGGCAACAAACAAGCAT+TGG + chr4.2:19473876-19473895 MS.gene90192:CDS 40.0%
CACCAATGGTCATGAAAGTT+AGG - chr4.2:19475778-19475797 None:intergenic 40.0%
CAGTATCCTTCGATACAAGT+CGG + chr4.2:19474807-19474826 MS.gene90192:intron 40.0%
CCAACGCAATATATATGCCA+AGG - chr4.2:19475574-19475593 None:intergenic 40.0%
CCTTGGCATATATATTGCGT+TGG + chr4.2:19475571-19475590 MS.gene90192:CDS 40.0%
CTAACTTTCATGACCATTGG+TGG + chr4.2:19475776-19475795 MS.gene90192:CDS 40.0%
GAAAGAGATGAAATTGGTGG+TGG + chr4.2:19476545-19476564 MS.gene90192:CDS 40.0%
GCAATCAACACAAGAATTGG+AGG + chr4.2:19474240-19474259 MS.gene90192:CDS 40.0%
GGTTCAAACACAAGACAATC+AGG + chr4.2:19473841-19473860 MS.gene90192:CDS 40.0%
GGTTCAAAGACTACATGCAT+TGG - chr4.2:19473777-19473796 None:intergenic 40.0%
TAGGCAAACAAGACAAGTCT+TGG + chr4.2:19476766-19476785 MS.gene90192:CDS 40.0%
TCATGTCCTCCACATAAGAA+GGG - chr4.2:19475805-19475824 None:intergenic 40.0%
TGTCGGAGATATTAACCCAT+TGG + chr4.2:19473329-19473348 MS.gene90192:intron 40.0%
TTCATGTCCTCCACATAAGA+AGG - chr4.2:19475806-19475825 None:intergenic 40.0%
TTCGCGATCTTGGCTATTAT+TGG + chr4.2:19475543-19475562 MS.gene90192:CDS 40.0%
TTCTTATGTGGAGGACATGA+AGG + chr4.2:19475805-19475824 MS.gene90192:CDS 40.0%
TTTCTTGATGAACCAACCAG+TGG + chr4.2:19474345-19474364 MS.gene90192:CDS 40.0%
! AGAAGGGAGTTTGCTTAACT+TGG + chr4.2:19472820-19472839 MS.gene90192:CDS 40.0%
! ATAACTGGTGCTGGAATTCA+AGG + chr4.2:19476380-19476399 MS.gene90192:CDS 40.0%
! GGTGTTACGGCATATGTAAT+TGG + chr4.2:19476161-19476180 MS.gene90192:CDS 40.0%
! GTAGATTTTCCACAACCAGA+AGG - chr4.2:19472960-19472979 None:intergenic 40.0%
! TAACTGGTGCTGGAATTCAA+GGG + chr4.2:19476381-19476400 MS.gene90192:CDS 40.0%
!! AAGACTTGTCTTGTTTGCCT+AGG - chr4.2:19476767-19476786 None:intergenic 40.0%
!! AATCCTTTTTGAAGACCTGG+AGG - chr4.2:19476254-19476273 None:intergenic 40.0%
!! AGGTCAGCTTTTGGCTATAA+TGG + chr4.2:19472932-19472951 MS.gene90192:CDS 40.0%
!! AGTACTAGGTTGATGGATTG+AGG - chr4.2:19474454-19474473 None:intergenic 40.0%
!! ATCCTTTTTGAAGACCTGGA+GGG - chr4.2:19476253-19476272 None:intergenic 40.0%
!! GGTCAGCTTTTGGCTATAAT+GGG + chr4.2:19472933-19472952 MS.gene90192:CDS 40.0%
!! GGTTGATCTTGGAGTATTGT+TGG + chr4.2:19476649-19476668 MS.gene90192:CDS 40.0%
!! TACTCAAAGTGGGTTGATCT+TGG + chr4.2:19476638-19476657 MS.gene90192:CDS 40.0%
!! TGATCGGATGGATTTTGTAG+GGG - chr4.2:19474679-19474698 None:intergenic 40.0%
!! TGGTTTCCTTTTCAGGATAG+AGG + chr4.2:19475725-19475744 MS.gene90192:intron 40.0%
AACACAAGAATTGGAGGGTG+GGG + chr4.2:19474246-19474265 MS.gene90192:CDS 45.0%
ACCTGGAGGGTAATATGCTA+TGG - chr4.2:19476240-19476259 None:intergenic 45.0%
ATGGGAATCATAACTGGTGC+TGG + chr4.2:19476371-19476390 MS.gene90192:CDS 45.0%
CAACACAAGAATTGGAGGGT+GGG + chr4.2:19474245-19474264 MS.gene90192:CDS 45.0%
CAAGGGATTATGATGTTGGC+AGG + chr4.2:19476398-19476417 MS.gene90192:CDS 45.0%
CACGGCTTCTTTAACGGTTA+AGG - chr4.2:19474124-19474143 None:intergenic 45.0%
CTCTTGCGCTTTCAATCTCT+AGG - chr4.2:19472761-19472780 None:intergenic 45.0%
GATGAATGGAGGAGAAGAGA+AGG + chr4.2:19472803-19472822 MS.gene90192:CDS 45.0%
GCATAAGTGGGGGTCAAAAA+AGG + chr4.2:19474277-19474296 MS.gene90192:CDS 45.0%
GCTTCCTTGGACAAAAAGGA+TGG + chr4.2:19474408-19474427 MS.gene90192:CDS 45.0%
GTGAACATGTTTCGCGATCT+TGG + chr4.2:19475533-19475552 MS.gene90192:CDS 45.0%
TAATGACGAACGTTCACCGA+GGG - chr4.2:19475995-19476014 None:intergenic 45.0%
TACCCTCCAGGTCTTCAAAA+AGG + chr4.2:19476248-19476267 MS.gene90192:CDS 45.0%
TCAACACAAGAATTGGAGGG+TGG + chr4.2:19474244-19474263 MS.gene90192:CDS 45.0%
TCAATTCTTCAGGGTCTGAC+TGG + chr4.2:19472897-19472916 MS.gene90192:CDS 45.0%
TGGATTCCCTTCTTATGTGG+AGG + chr4.2:19475796-19475815 MS.gene90192:CDS 45.0%
! GAGATGGATTTAGCAGAGAC+TGG + chr4.2:19475234-19475253 MS.gene90192:CDS 45.0%
! GATTGAAAGCGCAAGAGAAG+AGG + chr4.2:19472764-19472783 MS.gene90192:CDS 45.0%
! GGCTATTATTGGTTACGCCT+TGG + chr4.2:19475554-19475573 MS.gene90192:CDS 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG + chr4.2:19474265-19474284 MS.gene90192:CDS 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG + chr4.2:19474266-19474285 MS.gene90192:CDS 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG + chr4.2:19474267-19474286 MS.gene90192:CDS 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG + chr4.2:19474264-19474283 MS.gene90192:CDS 45.0%
!! AGAGATGAAATTGGTGGTGG+TGG + chr4.2:19476548-19476567 MS.gene90192:CDS 45.0%
!! AGCATTGGCTTATGGAACCT+CGG + chr4.2:19473891-19473910 MS.gene90192:CDS 45.0%
!! ATAATGGGTCCTTCTGGTTG+TGG + chr4.2:19472948-19472967 MS.gene90192:CDS 45.0%
!! GTGACTGTTTCTGCTTCAAC+AGG + chr4.2:19472855-19472874 MS.gene90192:CDS 45.0%
!! TGGTGGATTCCCTTCTTATG+TGG + chr4.2:19475793-19475812 MS.gene90192:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG + chr4.2:19472942-19472961 MS.gene90192:CDS 45.0%
!! ATATTTATATACAAATTATT+GGG + chr4.2:19473656-19473675 MS.gene90192:intron 5.0%
!!! AAATAATATCATATTTTAAT+TGG - chr4.2:19473798-19473817 None:intergenic 5.0%
AAAGCACAATCTGTGGCAGC+GGG + chr4.2:19473700-19473719 MS.gene90192:intron 50.0%
AGCTGCACTATCAAGTCCAC+TGG - chr4.2:19474364-19474383 None:intergenic 50.0%
CAAAGCACAATCTGTGGCAG+CGG + chr4.2:19473699-19473718 MS.gene90192:intron 50.0%
CTAATGACGAACGTTCACCG+AGG - chr4.2:19475996-19476015 None:intergenic 50.0%
GCACTATCAAGTCCACTGGT+TGG - chr4.2:19474360-19474379 None:intergenic 50.0%
GCCATAGCATATTACCCTCC+AGG + chr4.2:19476236-19476255 MS.gene90192:CDS 50.0%
GGGATTATGATGTTGGCAGG+TGG + chr4.2:19476401-19476420 MS.gene90192:CDS 50.0%
GGGTAATATGCTATGGCTCC+AGG - chr4.2:19476233-19476252 None:intergenic 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG + chr4.2:19474255-19474274 MS.gene90192:CDS 50.0%
! CACTTATGTCGGTGTCTCCT+AGG + chr4.2:19476747-19476766 MS.gene90192:CDS 50.0%
! CTGACTGGTTATGCAAAGCC+AGG + chr4.2:19472912-19472931 MS.gene90192:CDS 50.0%
! CTTCTGCTGCATCTGAGGTT+AGG + chr4.2:19474541-19474560 MS.gene90192:intron 50.0%
! GAAAGCGCAAGAGAAGAGGT+AGG + chr4.2:19472768-19472787 MS.gene90192:CDS 50.0%
! GGATTTTGTAGGGGAGGACA+AGG - chr4.2:19474670-19474689 None:intergenic 50.0%
! TGCAAAGCCAGGTCAGCTTT+TGG + chr4.2:19472923-19472942 MS.gene90192:CDS 50.0%
!! GATGAAATTGGTGGTGGTGG+TGG + chr4.2:19476551-19476570 MS.gene90192:CDS 50.0%
!! TCGGATGGATTTTGTAGGGG+AGG - chr4.2:19474676-19474695 None:intergenic 50.0%
AAGCACAATCTGTGGCAGCG+GGG + chr4.2:19473701-19473720 MS.gene90192:intron 55.0%
ACCTCAGATGCAGCAGAAGC+AGG - chr4.2:19474540-19474559 None:intergenic 55.0%
ACCTGCTTCTGCTGCATCTG+AGG + chr4.2:19474536-19474555 MS.gene90192:CDS 55.0%
!! GAAATTGGTGGTGGTGGTGG+TGG + chr4.2:19476554-19476573 MS.gene90192:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 19472726 19476829 19472726 ID=MS.gene90192
chr4.2 mRNA 19472726 19476829 19472726 ID=MS.gene90192.t1;Parent=MS.gene90192
chr4.2 exon 19472726 19472999 19472726 ID=MS.gene90192.t1.exon1;Parent=MS.gene90192.t1
chr4.2 CDS 19472726 19472999 19472726 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19473833 19473912 19473833 ID=MS.gene90192.t1.exon2;Parent=MS.gene90192.t1
chr4.2 CDS 19473833 19473912 19473833 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19474087 19474557 19474087 ID=MS.gene90192.t1.exon3;Parent=MS.gene90192.t1
chr4.2 CDS 19474087 19474557 19474087 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19474646 19474732 19474646 ID=MS.gene90192.t1.exon4;Parent=MS.gene90192.t1
chr4.2 CDS 19474646 19474732 19474646 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19475228 19475371 19475228 ID=MS.gene90192.t1.exon5;Parent=MS.gene90192.t1
chr4.2 CDS 19475228 19475371 19475228 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19475458 19475649 19475458 ID=MS.gene90192.t1.exon6;Parent=MS.gene90192.t1
chr4.2 CDS 19475458 19475649 19475458 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19475740 19475826 19475740 ID=MS.gene90192.t1.exon7;Parent=MS.gene90192.t1
chr4.2 CDS 19475740 19475826 19475740 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
chr4.2 exon 19476128 19476829 19476128 ID=MS.gene90192.t1.exon8;Parent=MS.gene90192.t1
chr4.2 CDS 19476128 19476829 19476128 ID=cds.MS.gene90192.t1;Parent=MS.gene90192.t1
Gene Sequence

>MS.gene90192

ATGGCTTCCCTTCTTTCATCTGTGCCTAATATCCTAGAGATTGAAAGCGCAAGAGAAGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGAGTTTGCTTAACTTGGAAAGATTTATGGGTGACTGTTTCTGCTTCAACAGGAAAAACCAATGAAAGCAAATCAATTCTTCAGGGTCTGACTGGTTATGCAAAGCCAGGTCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGTACTACATGATCTTGACCATGCATGCAAATAACTAACTTCCAACTGCTATATATAACTTCCTAAATCCAAATCACCAACATACTTACTATTTCAACAATATGTAACATGTCTAATTTTGTATATTGTTTCTCAAGGTTAACTCATTTAAACGAATTAATATATTTGCTTAATTAATAACTTCAAATGAAAAATACTTCATTTTAAATTAAAACCTTACTATGTTTTAAAGTTCATGGCTGATGGCTTCTATTTCATTTTTTTGGATGATATTTGATTGTCTACATATAATCTTTTTCCTTTGATAAACACATGTTTTTCTGAAGAATTTGTCGGAGATATTAACCCATTGGTAAAAGTTTGACTTTATAATCTTAAATGACAAAATTCAAATCTCTTCGGTCGTAAAATAAATAGGCATTAGTATCGTGTTTATGAAAAAAGCTACATATTACTAGTAATTTGGTTTTAAACTAAGAAGGGAAGTTGATTGTTAAATTAAAAAATCAAAGTCAAAACTACTTCCATGTGGTTTTAACTGGTTTTTAGGATGAAGATGTGTTTTTAATTCTTAAACAGGAGGCGTGTCATCTTGACATACGCGTTATTTCATCTTACTGAAAAATTCTATGTACACACATTAAATAATAAGTTTAGATATTTATATACAAATTATTGGGTGGGAACTCTGAGAATGAAACAAAGCACAATCTGTGGCAGCGGGGTTTTTCTTTTATAATTGTGTTCAATTCTTTAAATTAAAGTTTATTAAGTTCCAATGCATGTAGTCTTTGAACCAATTAAAATATGATATTATTTTTATATGTATTTCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGTATATATAAAATCTAAAATCCTTCAATAAAAACAAATTGTAGAGTATACTACTCAAACAGTGCATGTATTATTTCAATTGATCTGTATATGTAATCACAACACAAACATATGTCACACAATATGATGATAATACTTAAACATTGTTTCAATTAATATGTATATGTGATCACAGGCATATGTCACACAAGATGATACTTTATTAACAACCTTAACCGTTAAAGAAGCCGTGTACTATTCAGCCCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAAAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTTAGCATTTGCATTGAGATTCTTACACGTCCCAGACTTCTTTTTCTTGATGAACCAACCAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGCAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATCTGAGGTTAGGATTAATTATGTTCCATGTTAATTTTCAATTATATATAATTGATGACCATTTAGTAATTAATTCTGTTTTTGTTCCAATGTAGTTTTTTGCTTTGAACGGATTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGTAAGTTGATTAAGTAATGATAACATCGATTGTTTGTTTCATAGATTCCTTCTTTTTTTTAGTATCATGGTTATCAGTATCCTTCGATACAAGTCGGAAATATCAAGATTCGATACAAAATTGAACTCAATATGAATCCCTAGTGTCTATCTATTTTGCACATGAACCACATTGTGAATTCTGATAATCTAGATGTATTAAAATGAATAATTACCTACATTTTTGTATCCAACCATGTTTTTATGTCAACTTTGTATAATGAGTCACTTTTCTTTTGTAATTTGATTTATGAGTTGAATCTTGAATTATTTAAGGTTCATATATGATATACTCGTAATGTATCTTATGAGTCATAATAAAATTTGATACAATGTTCAGAAAATAATTCTTCTGATTCATGATATGAATCACAATTTAGTAAGCATGATTAGTATTACAACATATTCTAACATATATAATTCATATAAATGATTTTGAAATATGTTTCAATGTTAGGATATTGAGATGGATTTAGCAGAGACTGGAACAATTTCCATTGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAATATTGTCTATAGTATTGTCTTTAAAGGTATCCTCTAAATTTGAGCTAAATTTAATTATTAATTGTTATAGTAAAAAAAAAATATTGACATGAAATTTTGATGGGTGTTTTAGGATAATAATTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTTACCAGAAGATCTTTTGTGAACATGTTTCGCGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCGTTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAATGGCTCAATTCAGGTAATTAACAATACCTTATATTACATTAACTGACCTTAAGTTTAGCTACTATCTTCTAATTTTGCATGTCACTTTTGGTTTCCTTTTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTCTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATAGTTCAAAGTTTCAAACTATTTTTATGAAAAGTTTTGCAAATATATATTGAATGAATGGTCAAACTGATTCTCGAAGTTGTAAGCATCGGTCAAAATAGTTCATAACTTTTGTGAATTGGTAAATACATTTTCAAAAATGAAAAAAATCGTTCAAAATTATCCCTCGGTGAACGTTCGTCATTAGAGTCTTACAATTTCGATTAGCAGTTTCTATATTAACTTGATATGTATCTGTAGTCACTAAATTATTGTTTTATTCGGTCTTTTATGGTATCATATGCTATTAATTTGTATAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTTACGGCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGCTGATGATTTCAATCATTCCTGGAGCCATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGAACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCTGATTTTCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGGATTATGATGTTGGCAGGTGGATTCTTTAGATTGCCCAATGATCTTCCTAATCCATTTTGGAAATACCCTATGTTCTATATTGCCTTTCATAGGTATGCTTTTCAAGGATCTTATAAGAATGAGTTTGAAGGACTAAAATTTGAAAGAGATGAAATTGGTGGTGGTGGTGGTGGATCACTCAATTACATTAGTGGTGAAGAGATTCTAAGAAATAAATTTCAAGTAGATATGAGTTACTCAAAGTGGGTTGATCTTGGAGTATTGTTGGGTATGATTGTTCTATATCGACTTGTGTTTTTGATTATTATCAAAACTACTGAGAAGCTTAAACCTATTGTTATGTCACTTATGTCGGTGTCTCCTAGGCAAACAAGACAAGTCTTGGAGAATCCTAGTGCCACTCCTTTACATATAGACGTTGTATAA

Protein sequence

>MS.gene90192.t1

MASLLSSVPNILEIESAREEVGASKKMNGGEEKGVCLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAETGTISIEQAIDILVSSYSSSERNQEIKNEVSILSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSAIPYLLMISIIPGAIAYYPPGLQKGFENFIYFICALFSCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWKYPMFYIAFHRYAFQGSYKNEFEGLKFERDEIGGGGGGSLNYISGEEILRNKFQVDMSYSKWVDLGVLLGMIVLYRLVFLIIIKTTEKLKPIVMSLMSVSPRQTRQVLENPSATPLHIDVV