Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48593.t1 | RHN59586.1 | 96.8 | 188 | 6 | 0 | 2 | 189 | 72 | 259 | 1.10E-98 | 369.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48593.t1 | A0A396I1U4 | 96.8 | 188 | 6 | 0 | 2 | 189 | 72 | 259 | 7.7e-99 | 369.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene48593.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene48593 | 0.849191 | 3.79E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene48593 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene48593 | 0.828048 | 1.12E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene48593 | 0.879341 | 1.35E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene48593 | 0.877021 | 8.78E-69 | -1.69E-46 |
| MS.gene049396 | MS.gene48593 | 0.833607 | 4.84E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene48593 | 0.846015 | 2.83E-59 | -1.69E-46 |
| MS.gene049488 | MS.gene48593 | 0.824403 | 8.23E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene48593 | 0.867354 | 1.46E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene48593 | 0.880788 | 4.11E-70 | -1.69E-46 |
| MS.gene049662 | MS.gene48593 | 0.872005 | 4.43E-67 | -1.69E-46 |
| MS.gene049805 | MS.gene48593 | 0.866792 | 2.20E-65 | -1.69E-46 |
| MS.gene050076 | MS.gene48593 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene48593 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene48593 | 0.841091 | 5.86E-58 | -1.69E-46 |
| MS.gene050426 | MS.gene48593 | -0.8046 | 2.00E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene48593 | 0.863354 | 2.64E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene48593 | 0.814839 | 1.26E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene48593 | 0.83021 | 3.34E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene48593 | 0.800577 | 1.35E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene48593 | 0.855086 | 7.99E-62 | -1.69E-46 |
| MS.gene050625 | MS.gene48593 | 0.807375 | 5.21E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene48593 | 0.88808 | 8.10E-73 | -1.69E-46 |
| MS.gene050686 | MS.gene48593 | 0.818009 | 2.45E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene48593 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene48593 | 0.85502 | 8.35E-62 | -1.69E-46 |
| MS.gene050812 | MS.gene48593 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene48593 | 0.811641 | 6.32E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene48593 | 0.81819 | 2.23E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene48593 | 0.842024 | 3.33E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene48593 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene48593 | 0.907108 | 7.23E-81 | -1.69E-46 |
| MS.gene051113 | MS.gene48593 | -0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene051255 | MS.gene48593 | 0.820506 | 6.62E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene48593 | 0.834472 | 2.94E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene48593 | 0.84658 | 1.99E-59 | -1.69E-46 |
| MS.gene051525 | MS.gene48593 | 0.84053 | 8.23E-58 | -1.69E-46 |
| MS.gene051582 | MS.gene48593 | 0.804422 | 2.18E-49 | -1.69E-46 |
| MS.gene051605 | MS.gene48593 | 0.809424 | 1.91E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene48593 | 0.857933 | 1.16E-62 | -1.69E-46 |
| MS.gene051692 | MS.gene48593 | 0.877781 | 4.77E-69 | -1.69E-46 |
| MS.gene051838 | MS.gene48593 | 0.823818 | 1.13E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene48593 | 0.829028 | 6.47E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene48593 | 0.815321 | 9.82E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene48593 | -0.818812 | 1.61E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene48593 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene48593 | 0.806964 | 6.37E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene48593 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene48593 | 0.820119 | 8.12E-53 | -1.69E-46 |
| MS.gene052136 | MS.gene48593 | 0.831264 | 1.84E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene48593 | 0.865626 | 5.15E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene48593 | 0.871636 | 5.88E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene48593 | 0.879063 | 1.69E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene48593 | 0.85293 | 3.34E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene48593 | 0.86328 | 2.79E-64 | -1.69E-46 |
| MS.gene052346 | MS.gene48593 | 0.827852 | 1.24E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene48593 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene48593 | 0.889475 | 2.34E-73 | -1.69E-46 |
| MS.gene052421 | MS.gene48593 | 0.890458 | 9.68E-74 | -1.69E-46 |
| MS.gene052481 | MS.gene48593 | 0.881683 | 1.96E-70 | -1.69E-46 |
| MS.gene052484 | MS.gene48593 | 0.864084 | 1.57E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene48593 | 0.880479 | 5.31E-70 | -1.69E-46 |
| MS.gene052501 | MS.gene48593 | 0.850972 | 1.20E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene48593 | 0.80309 | 4.11E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene48593 | 0.855484 | 6.12E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene48593 | 0.841796 | 3.82E-58 | -1.69E-46 |
| MS.gene052982 | MS.gene48593 | 0.868616 | 5.72E-66 | -1.69E-46 |
| MS.gene052999 | MS.gene48593 | 0.80235 | 5.85E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene48593 | 0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene48593 | 0.840735 | 7.27E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene48593 | 0.839186 | 1.84E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene48593 | 0.866386 | 2.96E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene48593 | 0.829158 | 6.02E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene48593 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene48593 | 0.826047 | 3.36E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene48593 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene053449 | MS.gene48593 | 0.873074 | 1.95E-67 | -1.69E-46 |
| MS.gene053557 | MS.gene48593 | 0.802714 | 4.92E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene48593 | 0.841533 | 4.49E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene48593 | 0.813159 | 2.95E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene48593 | 0.867982 | 9.16E-66 | -1.69E-46 |
| MS.gene053813 | MS.gene48593 | 0.832559 | 8.82E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene48593 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene48593 | 0.84588 | 3.08E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene48593 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene48593 | 0.832633 | 8.46E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene48593 | 0.827973 | 1.16E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene48593 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene48593 | 0.801591 | 8.38E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene48593 | 0.835398 | 1.72E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene48593 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene48593 | 0.842471 | 2.53E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene48593 | 0.887517 | 1.33E-72 | -1.69E-46 |
| MS.gene055116 | MS.gene48593 | 0.893877 | 4.17E-75 | -1.69E-46 |
| MS.gene055206 | MS.gene48593 | 0.854079 | 1.56E-61 | -1.69E-46 |
| MS.gene055224 | MS.gene48593 | 0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene48593 | 0.844342 | 8.02E-59 | -1.69E-46 |
| MS.gene055289 | MS.gene48593 | 0.852213 | 5.35E-61 | -1.69E-46 |
| MS.gene055369 | MS.gene48593 | 0.815598 | 8.52E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene48593 | 0.820218 | 7.70E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene48593 | 0.802566 | 5.28E-49 | -1.69E-46 |
| MS.gene055486 | MS.gene48593 | 0.838475 | 2.81E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene48593 | 0.817675 | 2.92E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene48593 | 0.853646 | 2.08E-61 | -1.69E-46 |
| MS.gene055741 | MS.gene48593 | 0.819441 | 1.16E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene48593 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene48593 | 0.854117 | 1.52E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene48593 | 0.853388 | 2.47E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene48593 | 0.83694 | 6.97E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene48593 | 0.822034 | 2.94E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene48593 | 0.814594 | 1.42E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene48593 | 0.850943 | 1.22E-60 | -1.69E-46 |
| MS.gene056407 | MS.gene48593 | 0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene48593 | 0.846981 | 1.54E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene48593 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene48593 | 0.828294 | 9.74E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene48593 | 0.829449 | 5.12E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene48593 | 0.907648 | 4.04E-81 | -1.69E-46 |
| MS.gene056514 | MS.gene48593 | 0.812588 | 3.93E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene48593 | 0.842511 | 2.47E-58 | -1.69E-46 |
| MS.gene05664 | MS.gene48593 | 0.834832 | 2.39E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene48593 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene48593 | 0.831525 | 1.59E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene48593 | 0.817456 | 3.27E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene48593 | 0.807712 | 4.42E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene48593 | 0.817995 | 2.47E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene48593 | 0.84971 | 2.71E-60 | -1.69E-46 |
| MS.gene057048 | MS.gene48593 | 0.830882 | 2.29E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene48593 | 0.855225 | 7.28E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene48593 | 0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene48593 | 0.834614 | 2.71E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene48593 | 0.88262 | 8.94E-71 | -1.69E-46 |
| MS.gene057129 | MS.gene48593 | 0.82163 | 3.64E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene48593 | 0.840246 | 9.76E-58 | -1.69E-46 |
| MS.gene057310 | MS.gene48593 | 0.801999 | 6.91E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene48593 | 0.826813 | 2.21E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene48593 | 0.808998 | 2.35E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene48593 | 0.831707 | 1.43E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene48593 | 0.819016 | 1.45E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene48593 | 0.842476 | 2.53E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene48593 | 0.819485 | 1.13E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene48593 | 0.815276 | 1.00E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene48593 | 0.81289 | 3.38E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene48593 | 0.852941 | 3.32E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene48593 | 0.895409 | 9.85E-76 | -1.69E-46 |
| MS.gene057823 | MS.gene48593 | 0.897284 | 1.63E-76 | -1.69E-46 |
| MS.gene057825 | MS.gene48593 | 0.830404 | 2.99E-55 | -1.69E-46 |
| MS.gene057845 | MS.gene48593 | 0.81593 | 7.18E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene48593 | 0.844284 | 8.32E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene48593 | 0.830929 | 2.23E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene48593 | 0.817996 | 2.47E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene48593 | 0.81741 | 3.35E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene48593 | 0.824399 | 8.25E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene48593 | 0.858198 | 9.71E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene48593 | 0.851557 | 8.21E-61 | -1.69E-46 |
| MS.gene058075 | MS.gene48593 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene48593 | 0.815885 | 7.35E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene48593 | 0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene48593 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene48593 | 0.827276 | 1.71E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene48593 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene48593 | 0.802017 | 6.85E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene48593 | 0.837017 | 6.66E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene48593 | 0.867149 | 1.69E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene48593 | 0.802366 | 5.80E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene48593 | 0.845574 | 3.73E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene48593 | 0.854494 | 1.19E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene48593 | 0.835 | 2.16E-56 | -1.69E-46 |
| MS.gene058790 | MS.gene48593 | 0.801161 | 1.03E-48 | -1.69E-46 |
| MS.gene058838 | MS.gene48593 | 0.812064 | 5.12E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene48593 | 0.805952 | 1.04E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene48593 | 0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene48593 | 0.898351 | 5.78E-77 | -1.69E-46 |
| MS.gene058948 | MS.gene48593 | 0.837978 | 3.78E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene48593 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene48593 | 0.83428 | 3.28E-56 | -1.69E-46 |
| MS.gene059011 | MS.gene48593 | 0.810104 | 1.36E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene48593 | 0.849708 | 2.72E-60 | -1.69E-46 |
| MS.gene059082 | MS.gene48593 | 0.805517 | 1.28E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene48593 | 0.839975 | 1.15E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene48593 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene48593 | 0.823927 | 1.06E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene48593 | 0.843247 | 1.58E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene48593 | 0.860446 | 2.05E-63 | -1.69E-46 |
| MS.gene059367 | MS.gene48593 | 0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene059368 | MS.gene48593 | 0.835602 | 1.53E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene48593 | 0.866161 | 3.49E-65 | -1.69E-46 |
| MS.gene059455 | MS.gene48593 | 0.863895 | 1.80E-64 | -1.69E-46 |
| MS.gene059462 | MS.gene48593 | 0.801218 | 9.99E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene48593 | 0.85917 | 4.98E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene48593 | 0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene48593 | 0.872649 | 2.70E-67 | -1.69E-46 |
| MS.gene059676 | MS.gene48593 | 0.853818 | 1.86E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene48593 | 0.898307 | 6.03E-77 | -1.69E-46 |
| MS.gene059692 | MS.gene48593 | 0.891804 | 2.84E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene48593 | 0.890489 | 9.41E-74 | -1.69E-46 |
| MS.gene059711 | MS.gene48593 | 0.842086 | 3.21E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene48593 | 0.812227 | 4.72E-51 | -1.69E-46 |
| MS.gene059749 | MS.gene48593 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene48593 | 0.860109 | 2.60E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene48593 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene48593 | 0.801348 | 9.40E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene48593 | 0.824099 | 9.70E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene48593 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene48593 | 0.807347 | 5.28E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene48593 | 0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene48593 | 0.821805 | 3.32E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene48593 | 0.888497 | 5.60E-73 | -1.69E-46 |
| MS.gene060469 | MS.gene48593 | 0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene48593 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene060485 | MS.gene48593 | 0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene060569 | MS.gene48593 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene48593 | 0.887065 | 1.98E-72 | -1.69E-46 |
| MS.gene060818 | MS.gene48593 | 0.845354 | 4.28E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene48593 | 0.885718 | 6.39E-72 | -1.69E-46 |
| MS.gene060837 | MS.gene48593 | 0.891947 | 2.49E-74 | -1.69E-46 |
| MS.gene06092 | MS.gene48593 | 0.816699 | 4.83E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene48593 | 0.816914 | 4.33E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene48593 | 0.878209 | 3.38E-69 | -1.69E-46 |
| MS.gene061049 | MS.gene48593 | 0.848326 | 6.58E-60 | -1.69E-46 |
| MS.gene061051 | MS.gene48593 | -0.849982 | 2.28E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene48593 | 0.864384 | 1.26E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene48593 | 0.828482 | 8.77E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48593.t1 | AT1G72030 | 52.486 | 181 | 80 | 3 | 14 | 189 | 60 | 239 | 5.31e-53 | 170 |
Find 31 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAGTACCTTTACATTTC+AGG | 0.191164 | 4.1:-66769630 | MS.gene48593:CDS |
| TAGCTGTCTCCAATGCTTTC+AGG | 0.230533 | 4.1:-66769605 | MS.gene48593:intron |
| TTTGTTCTTTCAATTCTTTA+AGG | 0.237732 | 4.1:-66770514 | MS.gene48593:intron |
| TAGAGCTTATGAAGAAGATT+TGG | 0.253716 | 4.1:-66769249 | MS.gene48593:CDS |
| AAACTCATTGCCCCACAAAT+TGG | 0.293774 | 4.1:+66769280 | None:intergenic |
| TATATATAGGTATGCTTGTT+TGG | 0.294474 | 4.1:-66769754 | MS.gene48593:intron |
| AAATAGGCTGAAGTGCTTTC+AGG | 0.312360 | 4.1:-66769986 | MS.gene48593:intron |
| GTGAATATGGATGGAGAATA+AGG | 0.363826 | 4.1:-66770623 | MS.gene48593:CDS |
| AATCTTCTTCATAAGCTCTA+AGG | 0.373693 | 4.1:+66769252 | None:intergenic |
| TGAAAATATGAAGCAAAAGT+TGG | 0.383459 | 4.1:-66770658 | MS.gene48593:CDS |
| AGAGCTTATGAAGAAGATTT+GGG | 0.390390 | 4.1:-66769248 | MS.gene48593:CDS |
| TAACAACAAATGTACCTATC+AGG | 0.398497 | 4.1:+66769935 | None:intergenic |
| AGGTACTCTTGTGCTTCAGC+AGG | 0.452395 | 4.1:+66769642 | None:intergenic |
| GATTCATCAAAGGAACTTGT+AGG | 0.457006 | 4.1:-66769714 | MS.gene48593:CDS |
| TTAAATACTCACCTCCTGAT+AGG | 0.463612 | 4.1:-66769949 | MS.gene48593:intron |
| GTGACATAATATCCAATTTG+TGG | 0.474667 | 4.1:-66769292 | MS.gene48593:CDS |
| TGACATAATATCCAATTTGT+GGG | 0.486196 | 4.1:-66769291 | MS.gene48593:CDS |
| AAATCATTGAAAAGAGCTAC+AGG | 0.509660 | 4.1:+66770534 | None:intergenic |
| CAGCTATTCCTGAAATGTAA+AGG | 0.520945 | 4.1:+66769622 | None:intergenic |
| GGAGATGTTCAAGCACATCT+TGG | 0.525750 | 4.1:+66769664 | None:intergenic |
| ATATAGGTATGCTTGTTTGG+TGG | 0.525798 | 4.1:-66769751 | MS.gene48593:intron |
| AGAACATTGTACACAAATGC+TGG | 0.538265 | 4.1:-66769221 | MS.gene48593:CDS |
| GTGGATCTTTAGAAACAAGT+TGG | 0.539203 | 4.1:+66769195 | None:intergenic |
| CCAACCCAATTACTTGTCCA+TGG | 0.539516 | 4.1:+66769173 | None:intergenic |
| CATGAGAGAAGTGCGATCTG+AGG | 0.595779 | 4.1:-66768481 | MS.gene48593:CDS |
| GGTACTCTTGTGCTTCAGCA+GGG | 0.601704 | 4.1:+66769643 | None:intergenic |
| GAATGATCAAGATTCATCAA+AGG | 0.633438 | 4.1:-66769724 | MS.gene48593:CDS |
| ACCCAATTACTTGTCCATGG+TGG | 0.661718 | 4.1:+66769176 | None:intergenic |
| GACATAATATCCAATTTGTG+GGG | 0.672118 | 4.1:-66769290 | MS.gene48593:CDS |
| TTGTTTCTAAAGATCCACCA+TGG | 0.675137 | 4.1:-66769190 | MS.gene48593:CDS |
| CAACAAATGTACCTATCAGG+AGG | 0.675327 | 4.1:+66769938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAATAATAATTATTTT+AGG | + | chr4.1:66769295-66769314 | None:intergenic | 0.0% |
| !! | TATATTATGCTATTATATAT+AGG | - | chr4.1:66769387-66769406 | MS.gene48593:intron | 10.0% |
| !!! | ATATTCAAGTATTTTTAAAT+AGG | - | chr4.1:66769607-66769626 | MS.gene48593:CDS | 10.0% |
| !!! | GTCAAAATTTATTATTTTAA+AGG | + | chr4.1:66769081-66769100 | None:intergenic | 10.0% |
| !! | AATTAATAATCTACTTGATT+AGG | + | chr4.1:66770050-66770069 | None:intergenic | 15.0% |
| !! | ATCATTTATCAATATGAAAT+TGG | - | chr4.1:66769266-66769285 | MS.gene48593:CDS | 15.0% |
| !! | TAAAGACAAAATATTAGAAA+TGG | - | chr4.1:66770089-66770108 | MS.gene48593:intron | 15.0% |
| !! | AACATTAAACAACCATTTAA+AGG | + | chr4.1:66769131-66769150 | None:intergenic | 20.0% |
| !! | ATTTAAAGGCAAATAAAATG+TGG | + | chr4.1:66769117-66769136 | None:intergenic | 20.0% |
| !! | TCTAAAGAATATAAAACACA+TGG | - | chr4.1:66770531-66770550 | MS.gene48593:CDS | 20.0% |
| !! | TGTATTATATATGTGAAAGT+CGG | + | chr4.1:66768931-66768950 | None:intergenic | 20.0% |
| !! | TTTGTTCTTTCAATTCTTTA+AGG | - | chr4.1:66768640-66768659 | MS.gene48593:intron | 20.0% |
| !!! | ACATTTTATTTGCCTTTAAA+TGG | - | chr4.1:66769116-66769135 | MS.gene48593:intron | 20.0% |
| !!! | CTATGTTTTGAATTTTTTTC+TGG | + | chr4.1:66770421-66770440 | None:intergenic | 20.0% |
| !!! | TTATATTCTTTAGAAGCATA+TGG | + | chr4.1:66770525-66770544 | None:intergenic | 20.0% |
| ! | ATGTTAATGAGACTAATTGA+TGG | - | chr4.1:66769799-66769818 | MS.gene48593:intron | 25.0% |
| ! | CAATTTATTATCTCATGCTA+AGG | + | chr4.1:66769340-66769359 | None:intergenic | 25.0% |
| ! | TATATATAGGTATGCTTGTT+TGG | - | chr4.1:66769400-66769419 | MS.gene48593:intron | 25.0% |
| ! | TGAAAATATGAAGCAAAAGT+TGG | - | chr4.1:66768496-66768515 | MS.gene48593:intron | 25.0% |
| ! | TGACATAATATCCAATTTGT+GGG | - | chr4.1:66769863-66769882 | MS.gene48593:intron | 25.0% |
| ! | TTCTCTACTTATTGTCTTAA+AGG | + | chr4.1:66768893-66768912 | None:intergenic | 25.0% |
| !! | AATAGTAACAAGATTTTGAG+TGG | - | chr4.1:66768753-66768772 | MS.gene48593:intron | 25.0% |
| !!! | TATATGCTTCATGTTTTGAA+TGG | + | chr4.1:66770397-66770416 | None:intergenic | 25.0% |
| !!! | TGTTCAAATCTTTTTGAAGA+CGG | - | chr4.1:66770302-66770321 | MS.gene48593:intron | 25.0% |
| AAAGGCAAATAAAATGTGGT+AGG | + | chr4.1:66769113-66769132 | None:intergenic | 30.0% | |
| AAATCATTGAAAAGAGCTAC+AGG | + | chr4.1:66768623-66768642 | None:intergenic | 30.0% | |
| AAGAAAATGTCGTGTTCTTA+TGG | - | chr4.1:66770004-66770023 | MS.gene48593:intron | 30.0% | |
| AAGACAATAAGTAGAGAATC+TGG | - | chr4.1:66768895-66768914 | MS.gene48593:intron | 30.0% | |
| AATCTTCTTCATAAGCTCTA+AGG | + | chr4.1:66769905-66769924 | None:intergenic | 30.0% | |
| AGAGCTTATGAAGAAGATTT+GGG | - | chr4.1:66769906-66769925 | MS.gene48593:intron | 30.0% | |
| ATGGTTCTTGCTACAAAATT+AGG | + | chr4.1:66770378-66770397 | None:intergenic | 30.0% | |
| ATTCTAACCACTAGACAATT+TGG | + | chr4.1:66768866-66768885 | None:intergenic | 30.0% | |
| ATTTCACCATAAAGAGAGTT+TGG | + | chr4.1:66768804-66768823 | None:intergenic | 30.0% | |
| GAAATTGCTTCTCAAATTGT+AGG | - | chr4.1:66768819-66768838 | MS.gene48593:intron | 30.0% | |
| GAATGATCAAGATTCATCAA+AGG | - | chr4.1:66769430-66769449 | MS.gene48593:intron | 30.0% | |
| GAATGCAGATGAGATAAAAA+TGG | - | chr4.1:66768565-66768584 | MS.gene48593:intron | 30.0% | |
| GACATAATATCCAATTTGTG+GGG | - | chr4.1:66769864-66769883 | MS.gene48593:intron | 30.0% | |
| GTGACATAATATCCAATTTG+TGG | - | chr4.1:66769862-66769881 | MS.gene48593:intron | 30.0% | |
| TAACAACAAATGTACCTATC+AGG | + | chr4.1:66769222-66769241 | None:intergenic | 30.0% | |
| TAGAGCTTATGAAGAAGATT+TGG | - | chr4.1:66769905-66769924 | MS.gene48593:intron | 30.0% | |
| TTCTAACCACTAGACAATTT+GGG | + | chr4.1:66768865-66768884 | None:intergenic | 30.0% | |
| TTTGATCCAAACTCTCTTTA+TGG | - | chr4.1:66768795-66768814 | MS.gene48593:intron | 30.0% | |
| ! | AGTTTTCTTTTTGTGTGTTC+AGG | + | chr4.1:66769663-66769682 | None:intergenic | 30.0% |
| ! | GTTTTCTTTTTGTGTGTTCA+GGG | + | chr4.1:66769662-66769681 | None:intergenic | 30.0% |
| !! | TTTTAATCACCTGAAAGCAT+TGG | + | chr4.1:66769561-66769580 | None:intergenic | 30.0% |
| !! | TTTTGAAGACGGTAGTAAAA+TGG | - | chr4.1:66770313-66770332 | MS.gene48593:intron | 30.0% |
| !!! | GAAGCAAAAGTTGGATTTTT+TGG | - | chr4.1:66768505-66768524 | MS.gene48593:intron | 30.0% |
| !!! | GATTTTTTGGTGTGTGAATA+TGG | - | chr4.1:66768518-66768537 | MS.gene48593:intron | 30.0% |
| AAAATGTGGTAGGTGCTTAA+TGG | + | chr4.1:66769103-66769122 | None:intergenic | 35.0% | |
| AGAACATTGTACACAAATGC+TGG | - | chr4.1:66769933-66769952 | MS.gene48593:intron | 35.0% | |
| ATATAGGTATGCTTGTTTGG+TGG | - | chr4.1:66769403-66769422 | MS.gene48593:intron | 35.0% | |
| CAGCTATTCCTGAAATGTAA+AGG | + | chr4.1:66769535-66769554 | None:intergenic | 35.0% | |
| CTGAACATAGCTCAGTTAAT+AGG | + | chr4.1:66768958-66768977 | None:intergenic | 35.0% | |
| GATTCATCAAAGGAACTTGT+AGG | - | chr4.1:66769440-66769459 | MS.gene48593:intron | 35.0% | |
| GTGAATATGGATGGAGAATA+AGG | - | chr4.1:66768531-66768550 | MS.gene48593:intron | 35.0% | |
| TATCCATTCTTGACCCAAAT+AGG | - | chr4.1:66769152-66769171 | MS.gene48593:intron | 35.0% | |
| TATTTCAGTGTCATCGATCA+TGG | - | chr4.1:66770260-66770279 | MS.gene48593:intron | 35.0% | |
| TTAAATACTCACCTCCTGAT+AGG | - | chr4.1:66769205-66769224 | MS.gene48593:CDS | 35.0% | |
| TTGCTTCTCAAATTGTAGGA+TGG | - | chr4.1:66768823-66768842 | MS.gene48593:intron | 35.0% | |
| ! | GTGGATCTTTAGAAACAAGT+TGG | + | chr4.1:66769962-66769981 | None:intergenic | 35.0% |
| ! | TAAGTAGAGAATCTGGAGTT+CGG | - | chr4.1:66768902-66768921 | MS.gene48593:intron | 35.0% |
| ! | TCTTTTCCCAAATTGTCTAG+TGG | - | chr4.1:66768856-66768875 | MS.gene48593:intron | 35.0% |
| !! | CAAGAGTACCTTTACATTTC+AGG | - | chr4.1:66769524-66769543 | MS.gene48593:intron | 35.0% |
| !! | GATTAGTCTGCTTATGTAGA+AGG | - | chr4.1:66770647-66770666 | MS.gene48593:CDS | 35.0% |
| !! | TTGTTTCTAAAGATCCACCA+TGG | - | chr4.1:66769964-66769983 | MS.gene48593:CDS | 35.0% |
| !! | TTTTGGTGTGTGAATATGGA+TGG | - | chr4.1:66768522-66768541 | MS.gene48593:intron | 35.0% |
| AAACTCATTGCCCCACAAAT+TGG | + | chr4.1:66769877-66769896 | None:intergenic | 40.0% | |
| ACATGGCACTACAACAGAAA+TGG | - | chr4.1:66770548-66770567 | MS.gene48593:CDS | 40.0% | |
| AGAAGGAAAAGACGATTGCA+AGG | + | chr4.1:66770601-66770620 | None:intergenic | 40.0% | |
| ATCCACCATGGACAAGTAAT+TGG | - | chr4.1:66769976-66769995 | MS.gene48593:CDS | 40.0% | |
| CAACAAATGTACCTATCAGG+AGG | + | chr4.1:66769219-66769238 | None:intergenic | 40.0% | |
| TCCACCATGGACAAGTAATT+GGG | - | chr4.1:66769977-66769996 | MS.gene48593:CDS | 40.0% | |
| TCGCTAACATTAGCAACTAG+TGG | - | chr4.1:66769725-66769744 | MS.gene48593:CDS | 40.0% | |
| ! | AAATAGGCTGAAGTGCTTTC+AGG | - | chr4.1:66769168-66769187 | MS.gene48593:intron | 40.0% |
| ! | ATGAGACTAATTGATGGCAC+AGG | - | chr4.1:66769805-66769824 | MS.gene48593:intron | 40.0% |
| ! | GTCGAACTAGATTTTGCAGA+AGG | + | chr4.1:66770618-66770637 | None:intergenic | 40.0% |
| !! | GAAAGCACTTCAGCCTATTT+GGG | + | chr4.1:66769168-66769187 | None:intergenic | 40.0% |
| !! | TGAAAGCACTTCAGCCTATT+TGG | + | chr4.1:66769169-66769188 | None:intergenic | 40.0% |
| ACCCAATTACTTGTCCATGG+TGG | + | chr4.1:66769981-66770000 | None:intergenic | 45.0% | |
| CAGCCTATTTGGGTCAAGAA+TGG | + | chr4.1:66769158-66769177 | None:intergenic | 45.0% | |
| CCAACCCAATTACTTGTCCA+TGG | + | chr4.1:66769984-66770003 | None:intergenic | 45.0% | |
| CCATGGACAAGTAATTGGGT+TGG | - | chr4.1:66769981-66770000 | MS.gene48593:CDS | 45.0% | |
| GGAGATGTTCAAGCACATCT+TGG | + | chr4.1:66769493-66769512 | None:intergenic | 45.0% | |
| TAGCTGTCTCCAATGCTTTC+AGG | - | chr4.1:66769549-66769568 | MS.gene48593:intron | 45.0% | |
| ! | AGACTAATTGATGGCACAGG+AGG | - | chr4.1:66769808-66769827 | MS.gene48593:intron | 45.0% |
| AGGTACTCTTGTGCTTCAGC+AGG | + | chr4.1:66769515-66769534 | None:intergenic | 50.0% | |
| GGTACTCTTGTGCTTCAGCA+GGG | + | chr4.1:66769514-66769533 | None:intergenic | 50.0% | |
| ! | CATGAGAGAAGTGCGATCTG+AGG | - | chr4.1:66770673-66770692 | MS.gene48593:CDS | 50.0% |
| ! | CTAATTGATGGCACAGGAGG+AGG | - | chr4.1:66769811-66769830 | MS.gene48593:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 66768473 | 66770703 | 66768473 | ID=MS.gene48593 |
| chr4.1 | mRNA | 66768473 | 66770703 | 66768473 | ID=MS.gene48593.t1;Parent=MS.gene48593 |
| chr4.1 | exon | 66770515 | 66770703 | 66770515 | ID=MS.gene48593.t1.exon1;Parent=MS.gene48593.t1 |
| chr4.1 | CDS | 66770515 | 66770703 | 66770515 | ID=cds.MS.gene48593.t1;Parent=MS.gene48593.t1 |
| chr4.1 | exon | 66769950 | 66770002 | 66769950 | ID=MS.gene48593.t1.exon2;Parent=MS.gene48593.t1 |
| chr4.1 | CDS | 66769950 | 66770002 | 66769950 | ID=cds.MS.gene48593.t1;Parent=MS.gene48593.t1 |
| chr4.1 | exon | 66769606 | 66769767 | 66769606 | ID=MS.gene48593.t1.exon3;Parent=MS.gene48593.t1 |
| chr4.1 | CDS | 66769606 | 66769767 | 66769606 | ID=cds.MS.gene48593.t1;Parent=MS.gene48593.t1 |
| chr4.1 | exon | 66769186 | 66769349 | 66769186 | ID=MS.gene48593.t1.exon4;Parent=MS.gene48593.t1 |
| chr4.1 | CDS | 66769186 | 66769349 | 66769186 | ID=cds.MS.gene48593.t1;Parent=MS.gene48593.t1 |
| chr4.1 | exon | 66768473 | 66768510 | 66768473 | ID=MS.gene48593.t1.exon5;Parent=MS.gene48593.t1 |
| chr4.1 | CDS | 66768473 | 66768510 | 66768473 | ID=cds.MS.gene48593.t1;Parent=MS.gene48593.t1 |
| Gene Sequence |
| Protein sequence |
