Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37584.t1 | XP_003617181.2 | 99.2 | 374 | 3 | 0 | 54 | 427 | 118 | 491 | 1.40E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37584.t1 | P0AAD4 | 31.3 | 383 | 232 | 11 | 54 | 416 | 17 | 388 | 1.4e-32 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37584.t1 | G7KCR9 | 99.2 | 374 | 3 | 0 | 54 | 427 | 118 | 491 | 1.0e-201 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene37584 | 0.843497 | 1.35E-58 | -1.69E-46 |
| MS.gene049171 | MS.gene37584 | 0.825415 | 4.75E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene37584 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene37584 | 0.838145 | 3.42E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene37584 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene37584 | 0.832066 | 1.17E-55 | -1.69E-46 |
| MS.gene049373 | MS.gene37584 | 0.80901 | 2.34E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene37584 | 0.869472 | 3.02E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene37584 | 0.810586 | 1.07E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene37584 | 0.840863 | 6.73E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene37584 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene050170 | MS.gene37584 | 0.815676 | 8.18E-52 | -1.69E-46 |
| MS.gene050315 | MS.gene37584 | 0.836892 | 7.17E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene37584 | 0.822973 | 1.78E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene37584 | 0.826746 | 2.29E-54 | -1.69E-46 |
| MS.gene050547 | MS.gene37584 | -0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene37584 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene37584 | 0.806193 | 9.26E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene37584 | 0.80329 | 3.74E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene37584 | 0.825528 | 4.46E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene37584 | 0.857886 | 1.20E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene37584 | 0.857433 | 1.64E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene37584 | 0.820909 | 5.35E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene37584 | 0.852006 | 6.13E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene37584 | 0.827739 | 1.32E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene37584 | 0.826756 | 2.28E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene37584 | 0.853213 | 2.77E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene37584 | 0.822616 | 2.15E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene37584 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene37584 | 0.823853 | 1.11E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene37584 | 0.802691 | 4.97E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene37584 | 0.861567 | 9.37E-64 | -1.69E-46 |
| MS.gene051858 | MS.gene37584 | 0.842962 | 1.88E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene37584 | 0.850239 | 1.93E-60 | -1.69E-46 |
| MS.gene052211 | MS.gene37584 | -0.803322 | 3.68E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene37584 | 0.806777 | 6.98E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene37584 | 0.806873 | 6.66E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene37584 | 0.837045 | 6.55E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene37584 | 0.817482 | 3.22E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene37584 | 0.865456 | 5.83E-65 | -1.69E-46 |
| MS.gene052503 | MS.gene37584 | 0.857595 | 1.47E-62 | -1.69E-46 |
| MS.gene052505 | MS.gene37584 | 0.871962 | 4.58E-67 | -1.69E-46 |
| MS.gene052615 | MS.gene37584 | 0.885254 | 9.52E-72 | -1.69E-46 |
| MS.gene052823 | MS.gene37584 | 0.859295 | 4.57E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene37584 | 0.858513 | 7.83E-63 | -1.69E-46 |
| MS.gene052870 | MS.gene37584 | 0.811023 | 8.61E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene37584 | 0.82036 | 7.15E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene37584 | 0.853524 | 2.26E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene37584 | 0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene37584 | 0.842662 | 2.26E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene37584 | 0.851103 | 1.10E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene37584 | 0.845327 | 4.35E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene37584 | 0.814868 | 1.24E-51 | -1.69E-46 |
| MS.gene053480 | MS.gene37584 | 0.858748 | 6.66E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene37584 | 0.857801 | 1.27E-62 | -1.69E-46 |
| MS.gene053579 | MS.gene37584 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene37584 | 0.842327 | 2.77E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene37584 | 0.855348 | 6.70E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene37584 | 0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene054107 | MS.gene37584 | 0.804346 | 2.26E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene37584 | 0.849794 | 2.57E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene37584 | 0.823369 | 1.44E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene37584 | 0.826141 | 3.19E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene37584 | -0.812325 | 4.49E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene37584 | 0.847009 | 1.52E-59 | -1.69E-46 |
| MS.gene054742 | MS.gene37584 | -0.807647 | 4.56E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene37584 | 0.854727 | 1.02E-61 | -1.69E-46 |
| MS.gene05494 | MS.gene37584 | 0.822439 | 2.37E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene37584 | 0.855191 | 7.44E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene37584 | 0.833996 | 3.87E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene37584 | 0.825318 | 5.01E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene37584 | 0.866408 | 2.91E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene37584 | 0.838322 | 3.08E-57 | -1.69E-46 |
| MS.gene055370 | MS.gene37584 | 0.827553 | 1.47E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene37584 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene37584 | 0.847722 | 9.66E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene37584 | 0.848726 | 5.10E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene37584 | 0.816022 | 6.85E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene37584 | 0.824862 | 6.41E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene37584 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene37584 | 0.81376 | 2.17E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene37584 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene37584 | 0.806032 | 1.00E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene37584 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene37584 | 0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene37584 | 0.819245 | 1.29E-52 | -1.69E-46 |
| MS.gene056782 | MS.gene37584 | 0.830401 | 3.00E-55 | -1.69E-46 |
| MS.gene057048 | MS.gene37584 | 0.952242 | 3.69E-110 | -1.69E-46 |
| MS.gene057076 | MS.gene37584 | 0.839681 | 1.37E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene37584 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene37584 | 0.801741 | 7.80E-49 | -1.69E-46 |
| MS.gene057196 | MS.gene37584 | 0.832611 | 8.56E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene37584 | 0.826995 | 2.00E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene37584 | 0.862075 | 6.55E-64 | -1.69E-46 |
| MS.gene057845 | MS.gene37584 | 0.812885 | 3.38E-51 | -1.69E-46 |
| MS.gene057856 | MS.gene37584 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene37584 | 0.853906 | 1.75E-61 | -1.69E-46 |
| MS.gene058157 | MS.gene37584 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene37584 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene37584 | 0.82097 | 5.18E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene37584 | 0.820924 | 5.30E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene37584 | 0.855926 | 4.55E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene37584 | 0.844875 | 5.76E-59 | -1.69E-46 |
| MS.gene058444 | MS.gene37584 | 0.811917 | 5.51E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene37584 | 0.849726 | 2.69E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene37584 | 0.8184 | 2.00E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene37584 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene37584 | 0.859433 | 4.15E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene37584 | 0.813619 | 2.34E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene37584 | 0.818357 | 2.04E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene37584 | 0.866966 | 1.94E-65 | -1.69E-46 |
| MS.gene05914 | MS.gene37584 | 0.821557 | 3.79E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene37584 | 0.836053 | 1.17E-56 | -1.69E-46 |
| MS.gene059512 | MS.gene37584 | 0.805673 | 1.19E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene37584 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene37584 | 0.838221 | 3.27E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene37584 | 0.871839 | 5.03E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene37584 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene37584 | 0.846127 | 2.64E-59 | -1.69E-46 |
| MS.gene060485 | MS.gene37584 | 0.816086 | 6.63E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene37584 | 0.828896 | 6.97E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene37584 | 0.804714 | 1.89E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene37584 | 0.849717 | 2.70E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene37584 | 0.801738 | 7.82E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene37584 | 0.831598 | 1.52E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene37584 | 0.871651 | 5.81E-67 | -1.69E-46 |
| MS.gene061041 | MS.gene37584 | 0.802984 | 4.33E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene37584 | 0.821616 | 3.67E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37584.t1 | MTR_5g088730 | 99.198 | 374 | 3 | 0 | 54 | 427 | 118 | 491 | 0.0 | 732 |
| MS.gene37584.t1 | MTR_6g032995 | 29.630 | 297 | 194 | 6 | 54 | 338 | 108 | 401 | 1.71e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37584.t1 | AT5G19500 | 76.053 | 380 | 83 | 3 | 54 | 426 | 122 | 500 | 0.0 | 546 |
| MS.gene37584.t1 | AT2G33260 | 25.935 | 428 | 262 | 11 | 32 | 410 | 6 | 427 | 2.32e-25 | 107 |
| MS.gene37584.t1 | AT2G33260 | 25.935 | 428 | 262 | 11 | 32 | 410 | 110 | 531 | 3.09e-25 | 108 |
Find 90 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTTATACTCTCTTTAT+TGG | 0.117288 | 5.3:-71595717 | MS.gene37584:CDS |
| ATCTTACATTGGATTTGTTT+TGG | 0.161342 | 5.3:-71596402 | MS.gene37584:CDS |
| CTTCCTCCTGGAACTATTTC+AGG | 0.169530 | 5.3:+71595300 | None:intergenic |
| CACTTATTCTGTTCCTAGTT+TGG | 0.216924 | 5.3:-71596651 | MS.gene37584:CDS |
| CATTGGAGCTGCTTGGAAAT+TGG | 0.242103 | 5.3:+71596989 | None:intergenic |
| CTAATGGTTCTTGGTTGTTC+AGG | 0.261901 | 5.3:-71595267 | MS.gene37584:CDS |
| TACTGTCCCTAAAGTTCTTC+TGG | 0.295009 | 5.3:+71598502 | None:intergenic |
| CGCTTTATTGGTGCAATTAA+CGG | 0.312108 | 5.3:-71597756 | MS.gene37584:CDS |
| GCTTTATTGGTGCAATTAAC+GGG | 0.319160 | 5.3:-71597755 | MS.gene37584:CDS |
| TCAATGGCCAGAAGAACTTT+AGG | 0.325642 | 5.3:-71598509 | MS.gene37584:CDS |
| TTTAAAGCCTTGGACTTTGC+TGG | 0.326378 | 5.3:-71595680 | MS.gene37584:CDS |
| TTGGACTTTGCTGGAACATA+TGG | 0.347713 | 5.3:-71595671 | MS.gene37584:CDS |
| ATAACCCTACTAATGGTTCT+TGG | 0.355239 | 5.3:-71595276 | MS.gene37584:CDS |
| CGCACTCTCATTTGTTTACC+AGG | 0.361529 | 5.3:-71596952 | MS.gene37584:intron |
| ACAAATGAGAGTGCGATAAT+TGG | 0.362712 | 5.3:+71596960 | None:intergenic |
| TGAATTACATTCAAATGAAA+AGG | 0.363010 | 5.3:+71599359 | None:intergenic |
| AGATCTTCAAATGGAACAAT+TGG | 0.371731 | 5.3:-71596565 | MS.gene37584:CDS |
| TGTATGGAAGTGGCCTGTTT+TGG | 0.374979 | 5.3:+71595756 | None:intergenic |
| AAACTACCTGAAATAGTTCC+AGG | 0.375276 | 5.3:-71595306 | MS.gene37584:CDS |
| CAGTAGGAGTTCAAATTTCA+TGG | 0.400109 | 5.3:-71598484 | MS.gene37584:intron |
| ATATGTAGCCAGCGCTTTAT+TGG | 0.403549 | 5.3:-71597768 | MS.gene37584:intron |
| GAAGATCTCAACTGTTGTAA+TGG | 0.406888 | 5.3:+71596580 | None:intergenic |
| AAGGAGACTTGTTAAAAGTA+AGG | 0.407800 | 5.3:-71596823 | MS.gene37584:intron |
| GTTCTTTGTACAAATCTTGA+AGG | 0.411816 | 5.3:-71596842 | MS.gene37584:CDS |
| ATTAACGGGGTTCTAGTAGT+TGG | 0.418435 | 5.3:-71597741 | MS.gene37584:CDS |
| ATCTGAAGAACGAGCTATAT+AGG | 0.422804 | 5.3:+71598178 | None:intergenic |
| TCAAGATTTGTACAAAGAAC+AGG | 0.422918 | 5.3:+71596845 | None:intergenic |
| GGAACTAAAGTCAGTATGTA+TGG | 0.423140 | 5.3:+71595740 | None:intergenic |
| CCTGCAGTGACACAAGAATC+AGG | 0.423818 | 5.3:-71599174 | MS.gene37584:CDS |
| CGGCTCTGGCGGTGTATCAT+TGG | 0.428881 | 5.3:-71598915 | MS.gene37584:intron |
| TGCAAGTGGAAACCTGCATT+TGG | 0.434164 | 5.3:-71597027 | MS.gene37584:CDS |
| TTTCATTTGAATGTAATTCA+AGG | 0.434995 | 5.3:-71599356 | MS.gene37584:CDS |
| AGTGAGAATATCTCAACTAT+AGG | 0.436796 | 5.3:+71596440 | None:intergenic |
| GCGATAATTGGTATACTCAT+TGG | 0.437500 | 5.3:+71596972 | None:intergenic |
| ATCTCCCAACAGGCCAAAAC+AGG | 0.442842 | 5.3:-71595769 | MS.gene37584:CDS |
| CAATGGCCAGAAGAACTTTA+GGG | 0.450193 | 5.3:-71598508 | MS.gene37584:CDS |
| GAAATATTGCAGGTAGGTGC+AGG | 0.453044 | 5.3:-71599210 | MS.gene37584:intron |
| GATTGTCACCAACAGTTCCT+AGG | 0.453386 | 5.3:+71596617 | None:intergenic |
| CTGCAATGTCTTGGTCAGAT+AGG | 0.453502 | 5.3:-71595353 | MS.gene37584:CDS |
| TTTGGAGGCATATGCTACTT+TGG | 0.460980 | 5.3:-71598011 | MS.gene37584:CDS |
| GTTTGGAATGGTGTTATCCT+AGG | 0.466536 | 5.3:-71596634 | MS.gene37584:CDS |
| AACAACCAAGAACCATTAGT+AGG | 0.469226 | 5.3:+71595271 | None:intergenic |
| AGTAGGGTTATCCTTCCTCC+TGG | 0.469240 | 5.3:+71595288 | None:intergenic |
| AGATTATGTCCAGGTATCAA+TGG | 0.471981 | 5.3:-71598525 | MS.gene37584:intron |
| GTCAACACCATGTGTGATCT+CGG | 0.477231 | 5.3:-71598935 | MS.gene37584:CDS |
| GGATAACACCATTCCAAACT+AGG | 0.477436 | 5.3:+71596638 | None:intergenic |
| TCAGTGCTGAATCTCCCAAC+AGG | 0.479405 | 5.3:-71595779 | MS.gene37584:intron |
| GAGGCATATGCTACTTTGGA+AGG | 0.486837 | 5.3:-71598007 | MS.gene37584:intron |
| GAATTACATTCAAATGAAAA+GGG | 0.487000 | 5.3:+71599360 | None:intergenic |
| GTATACTCATTGGAGCTGCT+TGG | 0.490266 | 5.3:+71596982 | None:intergenic |
| ACCATGTGTGATCTCGGCTC+TGG | 0.490461 | 5.3:-71598929 | MS.gene37584:CDS |
| TCCAATAAAGAGAGTATAAG+TGG | 0.490812 | 5.3:+71595716 | None:intergenic |
| AGGAAGGATAACCCTACTAA+TGG | 0.492382 | 5.3:-71595283 | MS.gene37584:CDS |
| TTAAAAGAGCATCCAAATGC+AGG | 0.494323 | 5.3:+71597015 | None:intergenic |
| ATTCTGTTCCTAGTTTGGAA+TGG | 0.494543 | 5.3:-71596646 | MS.gene37584:CDS |
| GAAATCCTGCAGGTTGTGAC+AGG | 0.502128 | 5.3:-71598980 | MS.gene37584:intron |
| TTATTCCAGCTGCAATGTCT+TGG | 0.502595 | 5.3:-71595362 | MS.gene37584:CDS |
| CCTGATTCTTGTGTCACTGC+AGG | 0.516721 | 5.3:+71599174 | None:intergenic |
| TGTAATGGATCTAATCCCAT+TGG | 0.516758 | 5.3:+71596595 | None:intergenic |
| CAACAGTTGAGATCTTCAAA+TGG | 0.523385 | 5.3:-71596574 | MS.gene37584:CDS |
| CAAACTAGGAACAGAATAAG+TGG | 0.525691 | 5.3:+71596652 | None:intergenic |
| CTGAAATAGTTCCAGGAGGA+AGG | 0.527976 | 5.3:-71595299 | MS.gene37584:CDS |
| AGGCAATCAGAAGGGCGTAA+TGG | 0.529231 | 5.3:+71598198 | None:intergenic |
| GCAATTGCTACATCTTACAT+TGG | 0.529299 | 5.3:-71596413 | MS.gene37584:CDS |
| AAAGTCAGTATGTATGGAAG+TGG | 0.537228 | 5.3:+71595746 | None:intergenic |
| GTTCTAGTAGTTGGAATCAT+CGG | 0.544435 | 5.3:-71597732 | MS.gene37584:CDS |
| TCTGACCAAGACATTGCAGC+TGG | 0.549499 | 5.3:+71595357 | None:intergenic |
| AGAAGAACTTTAGGGACAGT+AGG | 0.553655 | 5.3:-71598500 | MS.gene37584:CDS |
| ACTGTTGGTGACAATCCAAT+GGG | 0.561349 | 5.3:-71596610 | MS.gene37584:CDS |
| AACTGTTGGTGACAATCCAA+TGG | 0.566366 | 5.3:-71596611 | MS.gene37584:CDS |
| GACTTTGCTGGAACATATGG+AGG | 0.569015 | 5.3:-71595668 | MS.gene37584:intron |
| TGCAGGAGTGCAATAATACT+AGG | 0.575731 | 5.3:-71596685 | MS.gene37584:intron |
| TATAATACATACAGTCTGCA+AGG | 0.577013 | 5.3:+71596366 | None:intergenic |
| ATGATGCACTGACACAAACA+TGG | 0.588721 | 5.3:+71599425 | None:intergenic |
| GGTGTTATCCTAGGAACTGT+TGG | 0.594469 | 5.3:-71596625 | MS.gene37584:CDS |
| AAATATTGCAGGTAGGTGCA+GGG | 0.597429 | 5.3:-71599209 | MS.gene37584:intron |
| GAGCTATATAGGCAATCAGA+AGG | 0.598567 | 5.3:+71598189 | None:intergenic |
| CTATATTAGACAGTTGCAAG+TGG | 0.602825 | 5.3:-71597041 | MS.gene37584:intron |
| AGTGCAATAATACTAGGCAC+TGG | 0.606834 | 5.3:-71596679 | MS.gene37584:CDS |
| ACAACCAAGAACCATTAGTA+GGG | 0.608420 | 5.3:+71595272 | None:intergenic |
| ATGTGTGATCTCGGCTCTGG+CGG | 0.610785 | 5.3:-71598926 | MS.gene37584:CDS |
| TAATTGCACCAATAAAGCGC+TGG | 0.615874 | 5.3:+71597760 | None:intergenic |
| CTTTATTGGTGCAATTAACG+GGG | 0.618716 | 5.3:-71597754 | MS.gene37584:CDS |
| ATATGTTCCAGCAAAGTCCA+AGG | 0.621878 | 5.3:+71595673 | None:intergenic |
| GCCAGAGCCGAGATCACACA+TGG | 0.623234 | 5.3:+71598928 | None:intergenic |
| CAATGCATAGCTGCAAAACG+TGG | 0.633270 | 5.3:-71599317 | MS.gene37584:CDS |
| AATAAAGAGAGTATAAGTGG+TGG | 0.637112 | 5.3:+71595719 | None:intergenic |
| AGCTATATAGGCAATCAGAA+GGG | 0.643728 | 5.3:+71598190 | None:intergenic |
| AATGCATAGCTGCAAAACGT+GGG | 0.682676 | 5.3:-71599316 | MS.gene37584:CDS |
| CTACCTGAAATAGTTCCAGG+AGG | 0.717690 | 5.3:-71595303 | MS.gene37584:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTTTCAAATTTTAAAAT+AGG | - | chr5.3:71597023-71597042 | MS.gene37584:CDS | 10.0% |
| !! | GAAAATTAAGACATAATTTA+AGG | + | chr5.3:71596551-71596570 | None:intergenic | 15.0% |
| !! | TTACTAATACTAATCTAAAT+AGG | + | chr5.3:71596102-71596121 | None:intergenic | 15.0% |
| !! | TTTGTAAAAAAAACATATTG+CGG | - | chr5.3:71598545-71598564 | MS.gene37584:intron | 15.0% |
| !!! | TAGATATTTAGAGATATTTT+AGG | + | chr5.3:71595911-71595930 | None:intergenic | 15.0% |
| !! | AAACAAAAATTAGACGTATT+CGG | - | chr5.3:71597150-71597169 | MS.gene37584:intron | 20.0% |
| !! | AACTAAAATTAACATGGAAA+TGG | + | chr5.3:71599037-71599056 | None:intergenic | 20.0% |
| !! | AATTGCAACTAAAATTAACA+TGG | + | chr5.3:71599043-71599062 | None:intergenic | 20.0% |
| !! | GAATTACATTCAAATGAAAA+GGG | + | chr5.3:71595298-71595317 | None:intergenic | 20.0% |
| !! | TAAATAGTCATGAAACTTTA+AGG | + | chr5.3:71598158-71598177 | None:intergenic | 20.0% |
| !! | TAATCTAAATCAATCTGATT+TGG | + | chr5.3:71597389-71597408 | None:intergenic | 20.0% |
| !! | TACGATAATGAAATATTACA+TGG | - | chr5.3:71597524-71597543 | MS.gene37584:intron | 20.0% |
| !! | TCAAAAGATAAGAAAGAAAT+TGG | + | chr5.3:71598319-71598338 | None:intergenic | 20.0% |
| !! | TCTATGAGATAAATAAACTT+AGG | - | chr5.3:71599120-71599139 | MS.gene37584:intron | 20.0% |
| !! | TGAATTACATTCAAATGAAA+AGG | + | chr5.3:71595299-71595318 | None:intergenic | 20.0% |
| !! | TTAGATTAGACGTTTAATAT+TGG | - | chr5.3:71597401-71597420 | MS.gene37584:intron | 20.0% |
| !! | TTTCAATTATGCAATAGTTA+GGG | - | chr5.3:71596327-71596346 | MS.gene37584:intron | 20.0% |
| !! | TTTCATTTGAATGTAATTCA+AGG | - | chr5.3:71595299-71595318 | MS.gene37584:CDS | 20.0% |
| !!! | AAGGCTTTAAAAAATATTTC+AGG | + | chr5.3:71598966-71598985 | None:intergenic | 20.0% |
| !!! | AATACGTCTAATTTTTGTTT+AGG | + | chr5.3:71597150-71597169 | None:intergenic | 20.0% |
| !!! | AGATATTTTAGGAACTAATA+TGG | + | chr5.3:71595900-71595919 | None:intergenic | 20.0% |
| !!! | AGGCTTTAAAAAATATTTCA+GGG | + | chr5.3:71598965-71598984 | None:intergenic | 20.0% |
| !!! | CTATTTTCCTAAATTATTAC+CGG | + | chr5.3:71596755-71596774 | None:intergenic | 20.0% |
| !!! | TAATTTTCATATACTTTGTC+AGG | - | chr5.3:71596563-71596582 | MS.gene37584:intron | 20.0% |
| !!! | TGAAATATTTTTTAAAGCCT+TGG | - | chr5.3:71598965-71598984 | MS.gene37584:CDS | 20.0% |
| !!! | TTATATTAATTTTTCAGCAG+AGG | + | chr5.3:71595638-71595657 | None:intergenic | 20.0% |
| !!! | TTTTCAATTATGCAATAGTT+AGG | - | chr5.3:71596326-71596345 | MS.gene37584:intron | 20.0% |
| ! | ACCTAAACTTTAGTTAAGAA+TGG | + | chr5.3:71599194-71599213 | None:intergenic | 25.0% |
| ! | ACTAATCTAAATAGGTAGAA+TGG | + | chr5.3:71596094-71596113 | None:intergenic | 25.0% |
| ! | AGTAAACTTCATATGATCTT+TGG | - | chr5.3:71597071-71597090 | MS.gene37584:intron | 25.0% |
| ! | AGTCGATAAAATTGAAATGA+TGG | + | chr5.3:71597908-71597927 | None:intergenic | 25.0% |
| ! | ATATATGCTTATTCAGAATG+TGG | - | chr5.3:71597785-71597804 | MS.gene37584:intron | 25.0% |
| ! | ATTTAATGCAAGCAAACTAT+TGG | - | chr5.3:71596218-71596237 | MS.gene37584:intron | 25.0% |
| ! | ATTTCAAACAAGTTATCCAT+TGG | + | chr5.3:71597463-71597482 | None:intergenic | 25.0% |
| ! | GCAAAATCACAAATAACAAA+TGG | - | chr5.3:71597266-71597285 | MS.gene37584:intron | 25.0% |
| ! | GGATAACATGTTCTTATAAA+TGG | - | chr5.3:71597171-71597190 | MS.gene37584:intron | 25.0% |
| ! | TCCATTCTTAACTAAAGTTT+AGG | - | chr5.3:71599190-71599209 | MS.gene37584:CDS | 25.0% |
| !! | ATTATTTCTTAACTCCCTAA+AGG | - | chr5.3:71595765-71595784 | MS.gene37584:CDS | 25.0% |
| !!! | AATGTTTTTTGTTTTGTTGC+AGG | - | chr5.3:71597953-71597972 | MS.gene37584:intron | 25.0% |
| !!! | AGTTACTTGCATTTTTTGTT+GGG | - | chr5.3:71595519-71595538 | MS.gene37584:intron | 25.0% |
| !!! | ATCTTACATTGGATTTGTTT+TGG | - | chr5.3:71598253-71598272 | MS.gene37584:intron | 25.0% |
| !!! | ATTTTAGTATCGTTCCTTTA+GGG | + | chr5.3:71595782-71595801 | None:intergenic | 25.0% |
| !!! | GCTTTGTTTTCATTGATTTT+TGG | - | chr5.3:71596626-71596645 | MS.gene37584:CDS | 25.0% |
| !!! | TCTTACATTGGATTTGTTTT+GGG | - | chr5.3:71598254-71598273 | MS.gene37584:intron | 25.0% |
| !!! | TCTTTTGATTAAAGCTAATG+CGG | - | chr5.3:71598331-71598350 | MS.gene37584:intron | 25.0% |
| !!! | TTGTTTTCATTGATTTTTGG+AGG | - | chr5.3:71596629-71596648 | MS.gene37584:CDS | 25.0% |
| AACATGTTCTTATAAATGGC+AGG | - | chr5.3:71597175-71597194 | MS.gene37584:intron | 30.0% | |
| AATCTCCAATCTTTGAACAA+CGG | - | chr5.3:71597736-71597755 | MS.gene37584:CDS | 30.0% | |
| ACCACTTATACTCTCTTTAT+TGG | - | chr5.3:71598938-71598957 | MS.gene37584:CDS | 30.0% | |
| ACTTGATTTAGATTATGTCC+AGG | - | chr5.3:71596121-71596140 | MS.gene37584:intron | 30.0% | |
| AGATAACATGCTCCAAATAA+AGG | - | chr5.3:71597211-71597230 | MS.gene37584:intron | 30.0% | |
| AGATCTTCAAATGGAACAAT+TGG | - | chr5.3:71598090-71598109 | MS.gene37584:intron | 30.0% | |
| AGTGAGAATATCTCAACTAT+AGG | + | chr5.3:71598218-71598237 | None:intergenic | 30.0% | |
| ATGAACAATGCTTCATTTGT+TGG | - | chr5.3:71598789-71598808 | MS.gene37584:intron | 30.0% | |
| CAAATGCTAAGAAATATTGC+AGG | - | chr5.3:71595435-71595454 | MS.gene37584:intron | 30.0% | |
| CAGTAGTAGCTAAAAGAAAA+AGG | + | chr5.3:71598135-71598154 | None:intergenic | 30.0% | |
| GTTCTTTGTACAAATCTTGA+AGG | - | chr5.3:71597813-71597832 | MS.gene37584:intron | 30.0% | |
| TACACACAATAAACAATCTC+AGG | - | chr5.3:71597324-71597343 | MS.gene37584:intron | 30.0% | |
| TAGGAACTAATATGGTAAAG+TGG | + | chr5.3:71595892-71595911 | None:intergenic | 30.0% | |
| TAGTTAAGAATGGATCGTTT+AGG | + | chr5.3:71599184-71599203 | None:intergenic | 30.0% | |
| TATAATACATACAGTCTGCA+AGG | + | chr5.3:71598292-71598311 | None:intergenic | 30.0% | |
| TCAAGATTTGTACAAAGAAC+AGG | + | chr5.3:71597813-71597832 | None:intergenic | 30.0% | |
| TCACAGATATATAGCCATAT+AGG | - | chr5.3:71597121-71597140 | MS.gene37584:intron | 30.0% | |
| TCTAAATAGGTAGAATGGAA+AGG | + | chr5.3:71596089-71596108 | None:intergenic | 30.0% | |
| TGTTCAAAGATTGGAGATTA+AGG | + | chr5.3:71597735-71597754 | None:intergenic | 30.0% | |
| TTAGCATTTGAGTGAAATGA+TGG | + | chr5.3:71595425-71595444 | None:intergenic | 30.0% | |
| TTAGTTATTAAGCATGCTAG+AGG | + | chr5.3:71598679-71598698 | None:intergenic | 30.0% | |
| TTGTAAGAAGCAAAATCATG+AGG | + | chr5.3:71595566-71595585 | None:intergenic | 30.0% | |
| TTTATCTCATAGACAAACTC+CGG | + | chr5.3:71599113-71599132 | None:intergenic | 30.0% | |
| ! | AATAAAGAGAGTATAAGTGG+TGG | + | chr5.3:71598939-71598958 | None:intergenic | 30.0% |
| ! | ATAATTTAAGGCCTAGTTAG+TGG | + | chr5.3:71596539-71596558 | None:intergenic | 30.0% |
| ! | CACTTTGATTTAAGAGAAAC+GGG | + | chr5.3:71596295-71596314 | None:intergenic | 30.0% |
| ! | CCACTTTGATTTAAGAGAAA+CGG | + | chr5.3:71596296-71596315 | None:intergenic | 30.0% |
| ! | GATATCTTGACGAATTTTCT+TGG | - | chr5.3:71596497-71596516 | MS.gene37584:intron | 30.0% |
| ! | TCCAATAAAGAGAGTATAAG+TGG | + | chr5.3:71598942-71598961 | None:intergenic | 30.0% |
| ! | TTTTCATATACTTTGTCAGG+AGG | - | chr5.3:71596566-71596585 | MS.gene37584:CDS | 30.0% |
| !! | AAGGAGACTTGTTAAAAGTA+AGG | - | chr5.3:71597832-71597851 | MS.gene37584:intron | 30.0% |
| !! | GAATCCTATTAGCCTTTATT+TGG | + | chr5.3:71597226-71597245 | None:intergenic | 30.0% |
| !! | GATTTTAGTATCGTTCCTTT+AGG | + | chr5.3:71595783-71595802 | None:intergenic | 30.0% |
| !! | TGTTGCACATTTTAAAGACT+AGG | - | chr5.3:71598702-71598721 | MS.gene37584:intron | 30.0% |
| !!! | CAGTTACTTGCATTTTTTGT+TGG | - | chr5.3:71595518-71595537 | MS.gene37584:intron | 30.0% |
| !!! | TATTCTCATAACTTTTTCGC+TGG | + | chr5.3:71595805-71595824 | None:intergenic | 30.0% |
| !!! | TTTCGACTTTTTCGTAATTG+CGG | - | chr5.3:71595367-71595386 | MS.gene37584:CDS | 30.0% |
| AAAAACATATTGCGGAACGA+TGG | - | chr5.3:71598553-71598572 | MS.gene37584:intron | 35.0% | |
| AAACTACCTGAAATAGTTCC+AGG | - | chr5.3:71599349-71599368 | MS.gene37584:CDS | 35.0% | |
| AAAGTCAGTATGTATGGAAG+TGG | + | chr5.3:71598912-71598931 | None:intergenic | 35.0% | |
| AACAACCAAGAACCATTAGT+AGG | + | chr5.3:71599387-71599406 | None:intergenic | 35.0% | |
| AATATGGTAAAGTGGCATCA+TGG | + | chr5.3:71595884-71595903 | None:intergenic | 35.0% | |
| ACAACCAAGAACCATTAGTA+GGG | + | chr5.3:71599386-71599405 | None:intergenic | 35.0% | |
| AGATTATGTCCAGGTATCAA+TGG | - | chr5.3:71596130-71596149 | MS.gene37584:intron | 35.0% | |
| AGCCTAATGTTGTCAAATAG+CGG | + | chr5.3:71598638-71598657 | None:intergenic | 35.0% | |
| AGCTATATAGGCAATCAGAA+GGG | + | chr5.3:71596468-71596487 | None:intergenic | 35.0% | |
| AGGCTGCAGAATCAAATTAA+GGG | + | chr5.3:71598198-71598217 | None:intergenic | 35.0% | |
| ATAACCCTACTAATGGTTCT+TGG | - | chr5.3:71599379-71599398 | MS.gene37584:CDS | 35.0% | |
| ATCTGAAGAACGAGCTATAT+AGG | + | chr5.3:71596480-71596499 | None:intergenic | 35.0% | |
| ATTCTGTTCCTAGTTTGGAA+TGG | - | chr5.3:71598009-71598028 | MS.gene37584:CDS | 35.0% | |
| CAAACTAGGAACAGAATAAG+TGG | + | chr5.3:71598006-71598025 | None:intergenic | 35.0% | |
| CAACAGTTGAGATCTTCAAA+TGG | - | chr5.3:71598081-71598100 | MS.gene37584:intron | 35.0% | |
| CACTTATTCTGTTCCTAGTT+TGG | - | chr5.3:71598004-71598023 | MS.gene37584:intron | 35.0% | |
| CAGTAGGAGTTCAAATTTCA+TGG | - | chr5.3:71596171-71596190 | MS.gene37584:intron | 35.0% | |
| CCGTTTCTCTTAAATCAAAG+TGG | - | chr5.3:71596293-71596312 | MS.gene37584:intron | 35.0% | |
| CTATATTAGACAGTTGCAAG+TGG | - | chr5.3:71597614-71597633 | MS.gene37584:intron | 35.0% | |
| CTTTATTGGTGCAATTAACG+GGG | - | chr5.3:71596901-71596920 | MS.gene37584:intron | 35.0% | |
| GAAGACACCGGTAATAATTT+AGG | - | chr5.3:71596745-71596764 | MS.gene37584:intron | 35.0% | |
| GAAGATCTCAACTGTTGTAA+TGG | + | chr5.3:71598078-71598097 | None:intergenic | 35.0% | |
| GCAATTGCTACATCTTACAT+TGG | - | chr5.3:71598242-71598261 | MS.gene37584:intron | 35.0% | |
| GCGATAATTGGTATACTCAT+TGG | + | chr5.3:71597686-71597705 | None:intergenic | 35.0% | |
| GGAACTAAAGTCAGTATGTA+TGG | + | chr5.3:71598918-71598937 | None:intergenic | 35.0% | |
| GTTCTAGTAGTTGGAATCAT+CGG | - | chr5.3:71596923-71596942 | MS.gene37584:intron | 35.0% | |
| TAAGATGATAAGACACATGC+TGG | + | chr5.3:71598445-71598464 | None:intergenic | 35.0% | |
| TAGGCTGCAGAATCAAATTA+AGG | + | chr5.3:71598199-71598218 | None:intergenic | 35.0% | |
| TCAACATGCGTAACATAACA+CGG | - | chr5.3:71596244-71596263 | MS.gene37584:intron | 35.0% | |
| TGCTAAGAAATATTGCAGGT+AGG | - | chr5.3:71595439-71595458 | MS.gene37584:intron | 35.0% | |
| TGCTCCAAATAAAGGCTAAT+AGG | - | chr5.3:71597219-71597238 | MS.gene37584:intron | 35.0% | |
| TTATGCAGTGTTGTCAAATG+CGG | - | chr5.3:71598462-71598481 | MS.gene37584:intron | 35.0% | |
| TTTGTCCGTTGTTCAAAGAT+TGG | + | chr5.3:71597744-71597763 | None:intergenic | 35.0% | |
| ! | ACAAATGAGAGTGCGATAAT+TGG | + | chr5.3:71597698-71597717 | None:intergenic | 35.0% |
| ! | ATTAAGCATGCTAGAGGTAT+AGG | + | chr5.3:71598673-71598692 | None:intergenic | 35.0% |
| ! | CAATGTGATTTTGTTGCAGT+TGG | - | chr5.3:71596420-71596439 | MS.gene37584:CDS | 35.0% |
| ! | CACTTGTGCATTCTATCTTT+TGG | - | chr5.3:71596038-71596057 | MS.gene37584:intron | 35.0% |
| ! | CGCTTTATTGGTGCAATTAA+CGG | - | chr5.3:71596899-71596918 | MS.gene37584:intron | 35.0% |
| ! | GAAAATTCGAGTTCGAATTC+AGG | + | chr5.3:71599162-71599181 | None:intergenic | 35.0% |
| ! | GCTTTATTGGTGCAATTAAC+GGG | - | chr5.3:71596900-71596919 | MS.gene37584:intron | 35.0% |
| !! | AAAGTATTGTCAGTTAGAGC+TGG | + | chr5.3:71596861-71596880 | None:intergenic | 35.0% |
| !! | TGTAATGGATCTAATCCCAT+TGG | + | chr5.3:71598063-71598082 | None:intergenic | 35.0% |
| !! | TTAAAAGAGCATCCAAATGC+AGG | + | chr5.3:71597643-71597662 | None:intergenic | 35.0% |
| !! | TTTTGTTTAGGCGTCCTATA+TGG | + | chr5.3:71597138-71597157 | None:intergenic | 35.0% |
| !!! | CATTTTTTGTTGGGCATTCA+TGG | - | chr5.3:71595528-71595547 | MS.gene37584:intron | 35.0% |
| AAATATTGCAGGTAGGTGCA+GGG | - | chr5.3:71595446-71595465 | MS.gene37584:intron | 40.0% | |
| AATCTGCTCAAATACCACTG+TGG | - | chr5.3:71598577-71598596 | MS.gene37584:intron | 40.0% | |
| AATGCATAGCTGCAAAACGT+GGG | - | chr5.3:71595339-71595358 | MS.gene37584:CDS | 40.0% | |
| AGCCGCTATTTGACAACATT+AGG | - | chr5.3:71598633-71598652 | MS.gene37584:intron | 40.0% | |
| AGGAAGGATAACCCTACTAA+TGG | - | chr5.3:71599372-71599391 | MS.gene37584:CDS | 40.0% | |
| AGTGCAATAATACTAGGCAC+TGG | - | chr5.3:71597976-71597995 | MS.gene37584:intron | 40.0% | |
| ATATGTAGCCAGCGCTTTAT+TGG | - | chr5.3:71596887-71596906 | MS.gene37584:intron | 40.0% | |
| ATATGTTCCAGCAAAGTCCA+AGG | + | chr5.3:71598985-71599004 | None:intergenic | 40.0% | |
| CAATGGCCAGAAGAACTTTA+GGG | - | chr5.3:71596147-71596166 | MS.gene37584:intron | 40.0% | |
| CGTTTCTCTTTCATGCTACA+CGG | - | chr5.3:71597488-71597507 | MS.gene37584:intron | 40.0% | |
| CTAATGGTTCTTGGTTGTTC+AGG | - | chr5.3:71599388-71599407 | MS.gene37584:CDS | 40.0% | |
| CTCTAGTCTCTCACACATAA+TGG | + | chr5.3:71596814-71596833 | None:intergenic | 40.0% | |
| GAGCTATATAGGCAATCAGA+AGG | + | chr5.3:71596469-71596488 | None:intergenic | 40.0% | |
| GCAATAGTTAGGGTTACAGA+GGG | - | chr5.3:71596337-71596356 | MS.gene37584:intron | 40.0% | |
| GGATAACACCATTCCAAACT+AGG | + | chr5.3:71598020-71598039 | None:intergenic | 40.0% | |
| TAATTGCACCAATAAAGCGC+TGG | + | chr5.3:71596898-71596917 | None:intergenic | 40.0% | |
| TACTGTCCCTAAAGTTCTTC+TGG | + | chr5.3:71596156-71596175 | None:intergenic | 40.0% | |
| TCAAATACCACTGTGGTCTA+CGG | - | chr5.3:71598584-71598603 | MS.gene37584:intron | 40.0% | |
| TCAATGGCCAGAAGAACTTT+AGG | - | chr5.3:71596146-71596165 | MS.gene37584:intron | 40.0% | |
| TGCAATAGTTAGGGTTACAG+AGG | - | chr5.3:71596336-71596355 | MS.gene37584:intron | 40.0% | |
| TGCATGGAATCTGTTTCCAA+TGG | - | chr5.3:71597444-71597463 | MS.gene37584:intron | 40.0% | |
| TGGAGATTAAGGAAGTTACC+TGG | + | chr5.3:71597724-71597743 | None:intergenic | 40.0% | |
| TTAAGAGAAACGGGAACAAC+TGG | + | chr5.3:71596286-71596305 | None:intergenic | 40.0% | |
| TTATTCCAGCTGCAATGTCT+TGG | - | chr5.3:71599293-71599312 | MS.gene37584:intron | 40.0% | |
| TTGAATGTAAGCACGTGCTT+CGG | - | chr5.3:71596781-71596800 | MS.gene37584:intron | 40.0% | |
| TTGGACTTTGCTGGAACATA+TGG | - | chr5.3:71598984-71599003 | MS.gene37584:intron | 40.0% | |
| ! | AGAAGAACTTTAGGGACAGT+AGG | - | chr5.3:71596155-71596174 | MS.gene37584:intron | 40.0% |
| ! | ATGATGCACTGACACAAACA+TGG | + | chr5.3:71595233-71595252 | None:intergenic | 40.0% |
| ! | ATTAACGGGGTTCTAGTAGT+TGG | - | chr5.3:71596914-71596933 | MS.gene37584:intron | 40.0% |
| ! | CTAGTTAGTGGCTTGTACAT+GGG | + | chr5.3:71596527-71596546 | None:intergenic | 40.0% |
| ! | TGCAGGAGTGCAATAATACT+AGG | - | chr5.3:71597970-71597989 | MS.gene37584:intron | 40.0% |
| ! | TTTAAAGCCTTGGACTTTGC+TGG | - | chr5.3:71598975-71598994 | MS.gene37584:intron | 40.0% |
| ! | TTTGGAGGCATATGCTACTT+TGG | - | chr5.3:71596644-71596663 | MS.gene37584:CDS | 40.0% |
| !! | AACTGTTGGTGACAATCCAA+TGG | - | chr5.3:71598044-71598063 | MS.gene37584:CDS | 40.0% |
| !! | ACTGTTGGTGACAATCCAAT+GGG | - | chr5.3:71598045-71598064 | MS.gene37584:CDS | 40.0% |
| !! | GTTTGGAATGGTGTTATCCT+AGG | - | chr5.3:71598021-71598040 | MS.gene37584:CDS | 40.0% |
| AGACAAACTCCGGATTCTCA+GGG | + | chr5.3:71599103-71599122 | None:intergenic | 45.0% | |
| CAATGCATAGCTGCAAAACG+TGG | - | chr5.3:71595338-71595357 | MS.gene37584:CDS | 45.0% | |
| CATCTGATGAGAAATCCTGC+AGG | - | chr5.3:71595665-71595684 | MS.gene37584:intron | 45.0% | |
| CATTGGAGCTGCTTGGAAAT+TGG | + | chr5.3:71597669-71597688 | None:intergenic | 45.0% | |
| CCATGTACAAGCCACTAACT+AGG | - | chr5.3:71596525-71596544 | MS.gene37584:intron | 45.0% | |
| CCCATCTGTAACCAAAATGC+CGG | + | chr5.3:71596598-71596617 | None:intergenic | 45.0% | |
| CCTTAACCCTCCAGTTTCTT+GGG | - | chr5.3:71599069-71599088 | MS.gene37584:intron | 45.0% | |
| CGCACTCTCATTTGTTTACC+AGG | - | chr5.3:71597703-71597722 | MS.gene37584:intron | 45.0% | |
| CTACCTGAAATAGTTCCAGG+AGG | - | chr5.3:71599352-71599371 | MS.gene37584:CDS | 45.0% | |
| CTGAAATAGTTCCAGGAGGA+AGG | - | chr5.3:71599356-71599375 | MS.gene37584:CDS | 45.0% | |
| CTGCAATGTCTTGGTCAGAT+AGG | - | chr5.3:71599302-71599321 | MS.gene37584:CDS | 45.0% | |
| CTTAACCCTCCAGTTTCTTG+GGG | - | chr5.3:71599070-71599089 | MS.gene37584:intron | 45.0% | |
| CTTCCTCCTGGAACTATTTC+AGG | + | chr5.3:71599358-71599377 | None:intergenic | 45.0% | |
| CTTTGTCAGGAGGCTAATAC+CGG | - | chr5.3:71596576-71596595 | MS.gene37584:CDS | 45.0% | |
| GAAATATTGCAGGTAGGTGC+AGG | - | chr5.3:71595445-71595464 | MS.gene37584:intron | 45.0% | |
| GACTTTGCTGGAACATATGG+AGG | - | chr5.3:71598987-71599006 | MS.gene37584:intron | 45.0% | |
| GATTGTCACCAACAGTTCCT+AGG | + | chr5.3:71598041-71598060 | None:intergenic | 45.0% | |
| GTATACTCATTGGAGCTGCT+TGG | + | chr5.3:71597676-71597695 | None:intergenic | 45.0% | |
| GTCAACACCATGTGTGATCT+CGG | - | chr5.3:71595720-71595739 | MS.gene37584:CDS | 45.0% | |
| GTGTTGTCAAATGCGGATAG+CGG | - | chr5.3:71598469-71598488 | MS.gene37584:intron | 45.0% | |
| TAGACAAACTCCGGATTCTC+AGG | + | chr5.3:71599104-71599123 | None:intergenic | 45.0% | |
| TCCTTAACCCTCCAGTTTCT+TGG | - | chr5.3:71599068-71599087 | MS.gene37584:intron | 45.0% | |
| TGCAAGTGGAAACCTGCATT+TGG | - | chr5.3:71597628-71597647 | MS.gene37584:intron | 45.0% | |
| TTCTTCTGGCCATTGATACC+TGG | + | chr5.3:71596142-71596161 | None:intergenic | 45.0% | |
| ! | CCTAGTTAGTGGCTTGTACA+TGG | + | chr5.3:71596528-71596547 | None:intergenic | 45.0% |
| ! | GGTGTTATCCTAGGAACTGT+TGG | - | chr5.3:71598030-71598049 | MS.gene37584:CDS | 45.0% |
| ! | TGTATGGAAGTGGCCTGTTT+TGG | + | chr5.3:71598902-71598921 | None:intergenic | 45.0% |
| !! | ATGCGGATAGCGGAAAATAG+CGG | - | chr5.3:71598479-71598498 | MS.gene37584:intron | 45.0% |
| !! | GAGGCATATGCTACTTTGGA+AGG | - | chr5.3:71596648-71596667 | MS.gene37584:CDS | 45.0% |
| !!! | ACCGGCATTTTGGTTACAGA+TGG | - | chr5.3:71596594-71596613 | MS.gene37584:CDS | 45.0% |
| !!! | CCGGCATTTTGGTTACAGAT+GGG | - | chr5.3:71596595-71596614 | MS.gene37584:CDS | 45.0% |
| !!! | CTGATAGTGCTGCTGCTTTT+CGG | - | chr5.3:71599268-71599287 | MS.gene37584:intron | 45.0% |
| AACACGGCTTCATCAGAGCT+CGG | - | chr5.3:71596260-71596279 | MS.gene37584:intron | 50.0% | |
| AGTAGGGTTATCCTTCCTCC+TGG | + | chr5.3:71599370-71599389 | None:intergenic | 50.0% | |
| ATACCACTGTGGTCTACGGA+CGG | - | chr5.3:71598588-71598607 | MS.gene37584:intron | 50.0% | |
| ATCTCCCAACAGGCCAAAAC+AGG | - | chr5.3:71598886-71598905 | MS.gene37584:intron | 50.0% | |
| CCCAAGAAACTGGAGGGTTA+AGG | + | chr5.3:71599072-71599091 | None:intergenic | 50.0% | |
| CCTGCAGTGACACAAGAATC+AGG | - | chr5.3:71595481-71595500 | MS.gene37584:intron | 50.0% | |
| GAAATCCTGCAGGTTGTGAC+AGG | - | chr5.3:71595675-71595694 | MS.gene37584:CDS | 50.0% | |
| TCCTTCCCCAAGAAACTGGA+GGG | + | chr5.3:71599078-71599097 | None:intergenic | 50.0% | |
| TCTGACCAAGACATTGCAGC+TGG | + | chr5.3:71599301-71599320 | None:intergenic | 50.0% | |
| TGACACTGACACGAAGACAC+CGG | - | chr5.3:71596733-71596752 | MS.gene37584:intron | 50.0% | |
| TGCGCGATGAAGTTACTGCA+TGG | - | chr5.3:71597428-71597447 | MS.gene37584:intron | 50.0% | |
| ! | AGGCAATCAGAAGGGCGTAA+TGG | + | chr5.3:71596460-71596479 | None:intergenic | 50.0% |
| ! | CCTGATTCTTGTGTCACTGC+AGG | + | chr5.3:71595484-71595503 | None:intergenic | 50.0% |
| ! | GGAGGCTAATACCGGCATTT+TGG | - | chr5.3:71596584-71596603 | MS.gene37584:CDS | 50.0% |
| ! | TCAGTGCTGAATCTCCCAAC+AGG | - | chr5.3:71598876-71598895 | MS.gene37584:intron | 50.0% |
| !!! | CGGCTTTTTTGCAGCTCTTG+TGG | - | chr5.3:71596943-71596962 | MS.gene37584:intron | 50.0% |
| ACCATGTGTGATCTCGGCTC+TGG | - | chr5.3:71595726-71595745 | MS.gene37584:CDS | 55.0% | |
| ACCCTCCAGTTTCTTGGGGA+AGG | - | chr5.3:71599074-71599093 | MS.gene37584:intron | 55.0% | |
| ATACCGTCCGTAGACCACAG+TGG | + | chr5.3:71598594-71598613 | None:intergenic | 55.0% | |
| CTCCAGTTTCTTGGGGAAGG+AGG | - | chr5.3:71599077-71599096 | MS.gene37584:intron | 55.0% | |
| CTCCTTCCCCAAGAAACTGG+AGG | + | chr5.3:71599079-71599098 | None:intergenic | 55.0% | |
| GCAAACCTGTCACAACCTGC+AGG | + | chr5.3:71595683-71595702 | None:intergenic | 55.0% | |
| ! | ATGTGTGATCTCGGCTCTGG+CGG | - | chr5.3:71595729-71595748 | MS.gene37584:CDS | 55.0% |
| !!! | AGTGGCCTGTTTTGGCCTGT+TGG | + | chr5.3:71598894-71598913 | None:intergenic | 55.0% |
| !!! | GTGGCCTGTTTTGGCCTGTT+GGG | + | chr5.3:71598893-71598912 | None:intergenic | 55.0% |
| GCCAGAGCCGAGATCACACA+TGG | + | chr5.3:71595730-71595749 | None:intergenic | 60.0% | |
| GGAAGGAGGCCCTGAGAATC+CGG | - | chr5.3:71599091-71599110 | MS.gene37584:intron | 60.0% | |
| GGCCTCCTTCCCCAAGAAAC+TGG | + | chr5.3:71599082-71599101 | None:intergenic | 60.0% | |
| ! | CGGCTCTGGCGGTGTATCAT+TGG | - | chr5.3:71595740-71595759 | MS.gene37584:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 71595221 | 71599456 | 71595221 | ID=MS.gene37584 |
| chr5.3 | mRNA | 71595221 | 71599456 | 71595221 | ID=MS.gene37584.t1;Parent=MS.gene37584 |
| chr5.3 | exon | 71599298 | 71599456 | 71599298 | ID=MS.gene37584.t1.exon1;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71599298 | 71599456 | 71599298 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71599128 | 71599220 | 71599128 | ID=MS.gene37584.t1.exon2;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71599128 | 71599220 | 71599128 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71598916 | 71598990 | 71598916 | ID=MS.gene37584.t1.exon3;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71598916 | 71598990 | 71598916 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71598485 | 71598534 | 71598485 | ID=MS.gene37584.t1.exon4;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71598485 | 71598534 | 71598485 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71598149 | 71598238 | 71598149 | ID=MS.gene37584.t1.exon5;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71598149 | 71598238 | 71598149 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71598008 | 71598064 | 71598008 | ID=MS.gene37584.t1.exon6;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71598008 | 71598064 | 71598008 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71597713 | 71597782 | 71597713 | ID=MS.gene37584.t1.exon7;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71597713 | 71597782 | 71597713 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71596953 | 71597054 | 71596953 | ID=MS.gene37584.t1.exon8;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71596953 | 71597054 | 71596953 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71596824 | 71596876 | 71596824 | ID=MS.gene37584.t1.exon9;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71596824 | 71596876 | 71596824 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71596564 | 71596702 | 71596564 | ID=MS.gene37584.t1.exon10;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71596564 | 71596702 | 71596564 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71596378 | 71596462 | 71596378 | ID=MS.gene37584.t1.exon11;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71596378 | 71596462 | 71596378 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71595669 | 71595797 | 71595669 | ID=MS.gene37584.t1.exon12;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71595669 | 71595797 | 71595669 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| chr5.3 | exon | 71595221 | 71595402 | 71595221 | ID=MS.gene37584.t1.exon13;Parent=MS.gene37584.t1 |
| chr5.3 | CDS | 71595221 | 71595402 | 71595221 | ID=cds.MS.gene37584.t1;Parent=MS.gene37584.t1 |
| Gene Sequence |
| Protein sequence |
