AlfalfaGEDB | MS.gene33475

M. sativa cultivar XinJiangDaYe / MS.gene33475

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33475.t1	GAU13942.1	84.7	262	38	2	1	260	1	262	2.00E-81	312.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33475.t1	A0A2K3NBC7	81.7	263	45	2	1	260	1	263	5.9e-75	290.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene33475	0.8205	6.64E-53	-1.69E-46
MS.gene049284	MS.gene33475	0.825929	3.59E-54	-1.69E-46
MS.gene049351	MS.gene33475	0.876746	1.09E-68	-1.69E-46
MS.gene049427	MS.gene33475	0.885865	5.62E-72	-1.69E-46
MS.gene049491	MS.gene33475	0.814465	1.52E-51	-1.69E-46
MS.gene049661	MS.gene33475	0.883742	3.47E-71	-1.69E-46
MS.gene049662	MS.gene33475	0.880893	3.77E-70	-1.69E-46
MS.gene049758	MS.gene33475	0.841857	3.68E-58	-1.69E-46
MS.gene049805	MS.gene33475	0.805309	1.42E-49	-1.69E-46
MS.gene050076	MS.gene33475	0.887895	9.55E-73	-1.69E-46
MS.gene050099	MS.gene33475	0.812588	3.93E-51	-1.69E-46
MS.gene050301	MS.gene33475	0.887246	1.69E-72	-1.69E-46
MS.gene050397	MS.gene33475	0.875437	3.08E-68	-1.69E-46
MS.gene050404	MS.gene33475	0.82062	6.23E-53	-1.69E-46
MS.gene050406	MS.gene33475	0.847987	8.16E-60	-1.69E-46
MS.gene050432	MS.gene33475	0.868378	6.83E-66	-1.69E-46
MS.gene050464	MS.gene33475	0.858987	5.65E-63	-1.69E-46
MS.gene050529	MS.gene33475	0.875294	3.45E-68	-1.69E-46
MS.gene050593	MS.gene33475	0.802268	6.08E-49	-1.69E-46
MS.gene050670	MS.gene33475	0.855567	5.79E-62	-1.69E-46
MS.gene050767	MS.gene33475	0.828854	7.13E-55	-1.69E-46
MS.gene050770	MS.gene33475	0.830367	3.06E-55	-1.69E-46
MS.gene050783	MS.gene33475	0.867127	1.72E-65	-1.69E-46
MS.gene050812	MS.gene33475	0.834166	3.51E-56	-1.69E-46
MS.gene05101	MS.gene33475	0.90192	1.64E-78	-1.69E-46
MS.gene05105	MS.gene33475	0.835434	1.68E-56	-1.69E-46
MS.gene051387	MS.gene33475	0.832076	1.16E-55	-1.69E-46
MS.gene051471	MS.gene33475	0.869703	2.54E-66	-1.69E-46
MS.gene051582	MS.gene33475	0.871341	7.36E-67	-1.69E-46
MS.gene051663	MS.gene33475	0.812209	4.76E-51	-1.69E-46
MS.gene051666	MS.gene33475	0.830995	2.15E-55	-1.69E-46
MS.gene051692	MS.gene33475	0.800191	1.62E-48	-1.69E-46
MS.gene051877	MS.gene33475	0.839939	1.17E-57	-1.69E-46
MS.gene052011	MS.gene33475	-0.81076	9.82E-51	-1.69E-46
MS.gene052078	MS.gene33475	0.885333	8.90E-72	-1.69E-46
MS.gene052178	MS.gene33475	0.811596	6.47E-51	-1.69E-46
MS.gene052188	MS.gene33475	0.851952	6.34E-61	-1.69E-46
MS.gene052253	MS.gene33475	0.852644	4.03E-61	-1.69E-46
MS.gene052290	MS.gene33475	0.811204	7.87E-51	-1.69E-46
MS.gene052310	MS.gene33475	0.888968	3.69E-73	-1.69E-46
MS.gene052322	MS.gene33475	0.852284	5.11E-61	-1.69E-46
MS.gene052326	MS.gene33475	0.882532	9.63E-71	-1.69E-46
MS.gene052340	MS.gene33475	0.838883	2.21E-57	-1.69E-46
MS.gene052421	MS.gene33475	0.819105	1.38E-52	-1.69E-46
MS.gene052481	MS.gene33475	0.836665	8.19E-57	-1.69E-46
MS.gene052484	MS.gene33475	0.816207	6.23E-52	-1.69E-46
MS.gene052485	MS.gene33475	0.839499	1.53E-57	-1.69E-46
MS.gene052982	MS.gene33475	0.807762	4.31E-50	-1.69E-46
MS.gene053103	MS.gene33475	0.824078	9.81E-54	-1.69E-46
MS.gene053104	MS.gene33475	0.806581	7.67E-50	-1.69E-46
MS.gene053107	MS.gene33475	0.849714	2.71E-60	-1.69E-46
MS.gene053209	MS.gene33475	0.823836	1.12E-53	-1.69E-46
MS.gene053322	MS.gene33475	0.849851	2.48E-60	-1.69E-46
MS.gene053557	MS.gene33475	0.821488	3.93E-53	-1.69E-46
MS.gene053836	MS.gene33475	0.870845	1.07E-66	-1.69E-46
MS.gene053907	MS.gene33475	0.835655	1.48E-56	-1.69E-46
MS.gene053928	MS.gene33475	0.800207	1.61E-48	-1.69E-46
MS.gene053971	MS.gene33475	0.846949	1.58E-59	-1.69E-46
MS.gene054123	MS.gene33475	0.864933	8.51E-65	-1.69E-46
MS.gene054376	MS.gene33475	0.861608	9.10E-64	-1.69E-46
MS.gene054473	MS.gene33475	0.808803	2.59E-50	-1.69E-46
MS.gene05455	MS.gene33475	0.861752	8.23E-64	-1.69E-46
MS.gene054802	MS.gene33475	0.875114	3.98E-68	-1.69E-46
MS.gene054803	MS.gene33475	0.875097	4.03E-68	-1.69E-46
MS.gene054804	MS.gene33475	0.877738	4.94E-69	-1.69E-46
MS.gene054955	MS.gene33475	0.816759	4.69E-52	-1.69E-46
MS.gene054983	MS.gene33475	0.825852	3.74E-54	-1.69E-46
MS.gene055116	MS.gene33475	0.874989	4.39E-68	-1.69E-46
MS.gene055277	MS.gene33475	0.894095	3.40E-75	-1.69E-46
MS.gene055390	MS.gene33475	0.860658	1.77E-63	-1.69E-46
MS.gene055397	MS.gene33475	0.82677	2.26E-54	-1.69E-46
MS.gene055412	MS.gene33475	0.82061	6.26E-53	-1.69E-46
MS.gene055422	MS.gene33475	0.879767	9.52E-70	-1.69E-46
MS.gene055428	MS.gene33475	0.897742	1.05E-76	-1.69E-46
MS.gene055499	MS.gene33475	0.850575	1.55E-60	-1.69E-46
MS.gene05553	MS.gene33475	0.822847	1.90E-53	-1.69E-46
MS.gene055564	MS.gene33475	0.810616	1.06E-50	-1.69E-46
MS.gene055604	MS.gene33475	0.815051	1.13E-51	-1.69E-46
MS.gene055712	MS.gene33475	0.826314	2.90E-54	-1.69E-46
MS.gene055896	MS.gene33475	0.854083	1.56E-61	-1.69E-46
MS.gene056191	MS.gene33475	0.837143	6.19E-57	-1.69E-46
MS.gene056407	MS.gene33475	0.892382	1.67E-74	-1.69E-46
MS.gene056410	MS.gene33475	0.810427	1.16E-50	-1.69E-46
MS.gene056451	MS.gene33475	0.821566	3.77E-53	-1.69E-46
MS.gene056452	MS.gene33475	0.821151	4.70E-53	-1.69E-46
MS.gene056609	MS.gene33475	0.829982	3.79E-55	-1.69E-46
MS.gene056612	MS.gene33475	0.880417	5.58E-70	-1.69E-46
MS.gene056659	MS.gene33475	0.810253	1.26E-50	-1.69E-46
MS.gene056723	MS.gene33475	0.805187	1.51E-49	-1.69E-46
MS.gene056796	MS.gene33475	0.838526	2.73E-57	-1.69E-46
MS.gene056899	MS.gene33475	-0.830993	2.15E-55	-1.69E-46
MS.gene057011	MS.gene33475	0.862301	5.58E-64	-1.69E-46
MS.gene05702	MS.gene33475	0.898167	6.91E-77	-1.69E-46
MS.gene057121	MS.gene33475	0.849735	2.67E-60	-1.69E-46
MS.gene057123	MS.gene33475	0.844028	9.74E-59	-1.69E-46
MS.gene057124	MS.gene33475	0.826143	3.19E-54	-1.69E-46
MS.gene057129	MS.gene33475	0.836102	1.14E-56	-1.69E-46
MS.gene057146	MS.gene33475	0.846102	2.68E-59	-1.69E-46
MS.gene057245	MS.gene33475	0.832968	6.98E-56	-1.69E-46
MS.gene057295	MS.gene33475	0.84457	6.96E-59	-1.69E-46
MS.gene05733	MS.gene33475	0.822422	2.39E-53	-1.69E-46
MS.gene057416	MS.gene33475	0.81297	3.24E-51	-1.69E-46
MS.gene057439	MS.gene33475	0.816789	4.61E-52	-1.69E-46
MS.gene057749	MS.gene33475	0.847897	8.64E-60	-1.69E-46
MS.gene057823	MS.gene33475	0.841013	6.15E-58	-1.69E-46
MS.gene057845	MS.gene33475	0.823665	1.23E-53	-1.69E-46
MS.gene058002	MS.gene33475	0.880096	7.27E-70	-1.69E-46
MS.gene058006	MS.gene33475	0.803205	3.89E-49	-1.69E-46
MS.gene058019	MS.gene33475	0.842126	3.13E-58	-1.69E-46
MS.gene058082	MS.gene33475	0.827092	1.89E-54	-1.69E-46
MS.gene05811	MS.gene33475	0.851594	8.02E-61	-1.69E-46
MS.gene058142	MS.gene33475	0.826299	2.93E-54	-1.69E-46
MS.gene058233	MS.gene33475	0.897685	1.11E-76	-1.69E-46
MS.gene058276	MS.gene33475	0.836002	1.21E-56	-1.69E-46
MS.gene058293	MS.gene33475	0.866011	3.89E-65	-1.69E-46
MS.gene058365	MS.gene33475	0.84573	3.38E-59	-1.69E-46
MS.gene058660	MS.gene33475	0.925218	2.47E-90	-1.69E-46
MS.gene058787	MS.gene33475	0.83497	2.20E-56	-1.69E-46
MS.gene058845	MS.gene33475	0.816637	4.99E-52	-1.69E-46
MS.gene05886	MS.gene33475	0.814392	1.58E-51	-1.69E-46
MS.gene058928	MS.gene33475	0.820199	7.78E-53	-1.69E-46
MS.gene058993	MS.gene33475	0.829535	4.87E-55	-1.69E-46
MS.gene059011	MS.gene33475	0.80346	3.45E-49	-1.69E-46
MS.gene05907	MS.gene33475	0.883632	3.81E-71	-1.69E-46
MS.gene059141	MS.gene33475	0.837548	4.87E-57	-1.69E-46
MS.gene059294	MS.gene33475	0.808295	3.32E-50	-1.69E-46
MS.gene059326	MS.gene33475	0.812579	3.95E-51	-1.69E-46
MS.gene059420	MS.gene33475	0.820416	6.94E-53	-1.69E-46
MS.gene059518	MS.gene33475	0.839279	1.74E-57	-1.69E-46
MS.gene059536	MS.gene33475	0.854771	9.86E-62	-1.69E-46
MS.gene059597	MS.gene33475	0.869077	4.06E-66	-1.69E-46
MS.gene05959	MS.gene33475	0.827514	1.50E-54	-1.69E-46
MS.gene059676	MS.gene33475	0.852257	5.20E-61	-1.69E-46
MS.gene059688	MS.gene33475	0.865248	6.78E-65	-1.69E-46
MS.gene059692	MS.gene33475	0.866671	2.40E-65	-1.69E-46
MS.gene059695	MS.gene33475	0.873149	1.84E-67	-1.69E-46
MS.gene059708	MS.gene33475	0.815617	8.43E-52	-1.69E-46
MS.gene05984	MS.gene33475	0.829065	6.34E-55	-1.69E-46
MS.gene059894	MS.gene33475	0.854068	1.57E-61	-1.69E-46
MS.gene059960	MS.gene33475	0.86197	7.05E-64	-1.69E-46
MS.gene06037	MS.gene33475	0.844324	8.11E-59	-1.69E-46
MS.gene060403	MS.gene33475	0.847775	9.34E-60	-1.69E-46
MS.gene060407	MS.gene33475	0.839101	1.94E-57	-1.69E-46
MS.gene060804	MS.gene33475	0.853762	1.93E-61	-1.69E-46
MS.gene06090	MS.gene33475	0.830425	2.96E-55	-1.69E-46
MS.gene061041	MS.gene33475	0.822214	2.67E-53	-1.69E-46
MS.gene061049	MS.gene33475	0.884807	1.40E-71	-1.69E-46
MS.gene061051	MS.gene33475	-0.845544	3.80E-59	-1.69E-46
MS.gene061154	MS.gene33475	0.800688	1.28E-48	-1.69E-46
MS.gene061200	MS.gene33475	0.843979	1.00E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33475.t1	MTR_4g015010	93.916	263	12	3	1	260	14	275	0.0	500
MS.gene33475.t1	MTR_7g067000	60.714	252	84	8	1	250	1	239	9.84e-84	251

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene33475.t1	AT3G09050	52.263	243	101	5	16	249	7	243	4.04e-73	224

Find 38 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTTCGTCTTACGGATTATT+TGG	0.131531	4.3:-83417350	MS.gene33475:CDS
ATTGGTGAAGATGCTCTTAA+AGG	0.254433	4.3:-83417268	MS.gene33475:CDS
AATGTTTACTTATTCTTCAT+TGG	0.294155	4.3:-83415956	MS.gene33475:CDS
TGGAAGAAAGTTGCAGTTCT+TGG	0.299282	4.3:-83415875	MS.gene33475:CDS
CCAGGTTGTGAAGTATTATC+AGG	0.334032	4.3:+83417430	None:intergenic
GTTGATAGAAGAAGGATAGA+AGG	0.335400	4.3:+83417540	None:intergenic
GTAACAACAAATGAGGAAAA+TGG	0.350272	4.3:-83415995	MS.gene33475:CDS
TCTGAATACTTGACACAGTT+TGG	0.366087	4.3:-83417319	MS.gene33475:CDS
GAGTGAGATGCTAGCATTTG+AGG	0.367845	4.3:-83416191	MS.gene33475:CDS
TTCTTCTTGTGTTGTGGTGG+GGG	0.383441	4.3:+83417494	None:intergenic
ATAGAAGGAAGGGTGAAATA+TGG	0.405812	4.3:+83417555	None:intergenic
CAAGTTGAGCTAGTAGCTCT+TGG	0.422521	4.3:+83417392	None:intergenic
ACTTCTTCTTGTGTTGTGGT+GGG	0.425298	4.3:+83417492	None:intergenic
CTTCTTCTTGTGTTGTGGTG+GGG	0.430419	4.3:+83417493	None:intergenic
AGTATTATCAGGTTCATCAT+TGG	0.435688	4.3:+83417441	None:intergenic
AATGGAGATTGAAGGACAAA+TGG	0.440803	4.3:-83416119	MS.gene33475:CDS
GGACTATTCTTTAAGAACTT+AGG	0.444508	4.3:-83416079	MS.gene33475:CDS
AACTTCTTCTTGTGTTGTGG+TGG	0.447722	4.3:+83417491	None:intergenic
CATCATTAAGTAGTACTGAT+TGG	0.456180	4.3:-83415895	MS.gene33475:CDS
ACTAGACAGAGTAGAGTTTG+AGG	0.456846	4.3:-83416158	MS.gene33475:CDS
TGGCTTTGAACATCACCTCC+AGG	0.458846	4.3:+83417412	None:intergenic
AAAGCTGAAATTGATAAGAT+TGG	0.462568	4.3:-83417286	MS.gene33475:CDS
TTTAAGAACTTAGGACAGAA+AGG	0.478730	4.3:-83416070	MS.gene33475:CDS
ATAGAAGAAGGATAGAAGGA+AGG	0.483138	4.3:+83417544	None:intergenic
ATCAGGTTCATCATTGGAGT+TGG	0.486180	4.3:+83417447	None:intergenic
CAGAACTTCTTCTTGTGTTG+TGG	0.493087	4.3:+83417488	None:intergenic
GGAAAGTGAAAGCAAAGTAA+TGG	0.500197	4.3:-83416137	MS.gene33475:CDS
TAGAAGAAGGATAGAAGGAA+GGG	0.500325	4.3:+83417545	None:intergenic
TGAAGATGCTCTTAAAGGAT+TGG	0.511035	4.3:-83417263	MS.gene33475:CDS
ATGGAAGTTGACAGAAATGA+AGG	0.525154	4.3:-83416100	MS.gene33475:CDS
GTGGTGGTGTTGATAGAAGA+AGG	0.543371	4.3:+83417532	None:intergenic
GAAAGATGTAACAACAAATG+AGG	0.557127	4.3:-83416002	MS.gene33475:CDS
AGCAAAGTAATGGAGATTGA+AGG	0.564863	4.3:-83416127	MS.gene33475:CDS
CCTGATAATACTTCACAACC+TGG	0.574595	4.3:-83417430	MS.gene33475:CDS
GGGGTGCAGAGTAGTAAAAG+TGG	0.581339	4.3:+83417513	None:intergenic
AGTTCTTGGAGCTATTCTTG+TGG	0.591041	4.3:-83415861	MS.gene33475:CDS
GTGCAGAGTAGTAAAAGTGG+TGG	0.674073	4.3:+83417516	None:intergenic
GATAATACTTCACAACCTGG+AGG	0.739356	4.3:-83417427	MS.gene33475:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACATATCTTATAAAAAAATA+TGG	+	chr4.3:83416916-83416935	None:intergenic	10.0%
!!!	ATACTTTAAAAACTGAATTA+TGG	+	chr4.3:83416254-83416273	None:intergenic	15.0%
!!	AATCACAAATGAATGTAAAA+GGG	+	chr4.3:83417134-83417153	None:intergenic	20.0%
!!	AATGTTTACTTATTCTTCAT+TGG	-	chr4.3:83417411-83417430	MS.gene33475:CDS	20.0%
!!	TAATCACAAATGAATGTAAA+AGG	+	chr4.3:83417135-83417154	None:intergenic	20.0%
!	AAAACTGAATTATGGTTTAC+TGG	+	chr4.3:83416246-83416265	None:intergenic	25.0%
!	AAAGCTGAAATTGATAAGAT+TGG	-	chr4.3:83416081-83416100	MS.gene33475:CDS	25.0%
!	TACTTTGTACACTTATCATA+TGG	-	chr4.3:83417027-83417046	MS.gene33475:intron	25.0%
!	TTAAAGTATAGTTCCTACTA+GGG	+	chr4.3:83416355-83416374	None:intergenic	25.0%
!!	CTTTTTACATATGGAATAGT+TGG	-	chr4.3:83417435-83417454	MS.gene33475:CDS	25.0%
!!	TTTAAAGTATAGTTCCTACT+AGG	+	chr4.3:83416356-83416375	None:intergenic	25.0%
!!!	CATCTTTTCTATTTCTTCTT+TGG	+	chr4.3:83417346-83417365	None:intergenic	25.0%
!!!	TTCATTGGTCTTTTTACATA+TGG	-	chr4.3:83417426-83417445	MS.gene33475:CDS	25.0%
	AAACTGTAGTTTGAATCCTA+GGG	-	chr4.3:83416471-83416490	MS.gene33475:intron	30.0%
	AGATAAAATGAGAGAGAGAT+TGG	-	chr4.3:83416397-83416416	MS.gene33475:intron	30.0%
	AGGAAAATGGAAGAAAAACA+AGG	-	chr4.3:83417385-83417404	MS.gene33475:CDS	30.0%
	AGTATTATCAGGTTCATCAT+TGG	+	chr4.3:83415929-83415948	None:intergenic	30.0%
	ATTGGACTATAATGTTAGTC+AGG	-	chr4.3:83416415-83416434	MS.gene33475:intron	30.0%
	GAAAGATGTAACAACAAATG+AGG	-	chr4.3:83417365-83417384	MS.gene33475:CDS	30.0%
	GTAACAACAAATGAGGAAAA+TGG	-	chr4.3:83417372-83417391	MS.gene33475:CDS	30.0%
	TCATTATGTTAATCCCTAGT+AGG	-	chr4.3:83416339-83416358	MS.gene33475:intron	30.0%
	TTTAAGAACTTAGGACAGAA+AGG	-	chr4.3:83417297-83417316	MS.gene33475:CDS	30.0%
!	GCTTTTGCTTTATCAACATT+AGG	+	chr4.3:83417324-83417343	None:intergenic	30.0%
!	GGACTATTCTTTAAGAACTT+AGG	-	chr4.3:83417288-83417307	MS.gene33475:CDS	30.0%
!	TTGAGAATTAGTCTCATAGT+CGG	-	chr4.3:83416549-83416568	MS.gene33475:intron	30.0%
!!	CATCATTAAGTAGTACTGAT+TGG	-	chr4.3:83417472-83417491	MS.gene33475:CDS	30.0%
!!!	TTTGTTTTGTCAAGATGCTA+GGG	+	chr4.3:83416670-83416689	None:intergenic	30.0%
	AACTGTAGTTTGAATCCTAG+GGG	-	chr4.3:83416472-83416491	MS.gene33475:intron	35.0%
	AATGGAGATTGAAGGACAAA+TGG	-	chr4.3:83417248-83417267	MS.gene33475:CDS	35.0%
	ATAGAAGAAGGATAGAAGGA+AGG	+	chr4.3:83415826-83415845	None:intergenic	35.0%
	ATAGAAGGAAGGGTGAAATA+TGG	+	chr4.3:83415815-83415834	None:intergenic	35.0%
	ATGGAAGTTGACAGAAATGA+AGG	-	chr4.3:83417267-83417286	MS.gene33475:CDS	35.0%
	ATTGGTGAAGATGCTCTTAA+AGG	-	chr4.3:83416099-83416118	MS.gene33475:CDS	35.0%
	GAAACTGTAGTTTGAATCCT+AGG	-	chr4.3:83416470-83416489	MS.gene33475:intron	35.0%
	GACAGAAAAAGTTCGTCTTA+CGG	-	chr4.3:83416008-83416027	MS.gene33475:CDS	35.0%
	GGAAAGTGAAAGCAAAGTAA+TGG	-	chr4.3:83417230-83417249	MS.gene33475:intron	35.0%
	TAGAAGAAGGATAGAAGGAA+GGG	+	chr4.3:83415825-83415844	None:intergenic	35.0%
	TCTGAATACTTGACACAGTT+TGG	-	chr4.3:83416048-83416067	MS.gene33475:CDS	35.0%
	TGAAGATGCTCTTAAAGGAT+TGG	-	chr4.3:83416104-83416123	MS.gene33475:CDS	35.0%
!	AGCAAAGTAATGGAGATTGA+AGG	-	chr4.3:83417240-83417259	MS.gene33475:intron	35.0%
!	AGTTCGTCTTACGGATTATT+TGG	-	chr4.3:83416017-83416036	MS.gene33475:CDS	35.0%
!	GTTGATAGAAGAAGGATAGA+AGG	+	chr4.3:83415830-83415849	None:intergenic	35.0%
!	TCTCCTCAAAGTCTCAATTT+TGG	+	chr4.3:83416773-83416792	None:intergenic	35.0%
!!	CTCAAAGTCTCAATTTTGGT+GGG	+	chr4.3:83416769-83416788	None:intergenic	35.0%
!!	GCATAAGTACTGCTTTTAAC+AGG	+	chr4.3:83417080-83417099	None:intergenic	35.0%
!!!	CTTTGTTTTGTCAAGATGCT+AGG	+	chr4.3:83416671-83416690	None:intergenic	35.0%
	AACTTCTTCTTGTGTTGTGG+TGG	+	chr4.3:83415879-83415898	None:intergenic	40.0%
	ACTAGACAGAGTAGAGTTTG+AGG	-	chr4.3:83417209-83417228	MS.gene33475:intron	40.0%
	ACTTCTTCTTGTGTTGTGGT+GGG	+	chr4.3:83415878-83415897	None:intergenic	40.0%
	AGCTAGCTAGAATCTATGCA+TGG	+	chr4.3:83416193-83416212	None:intergenic	40.0%
	AGTTCTTGGAGCTATTCTTG+TGG	-	chr4.3:83417506-83417525	MS.gene33475:CDS	40.0%
	AGTTTCTCAGATACTCCTAC+GGG	+	chr4.3:83416456-83416475	None:intergenic	40.0%
	ATCAGGTTCATCATTGGAGT+TGG	+	chr4.3:83415923-83415942	None:intergenic	40.0%
	CAGAACTTCTTCTTGTGTTG+TGG	+	chr4.3:83415882-83415901	None:intergenic	40.0%
	CAGTTTCTCAGATACTCCTA+CGG	+	chr4.3:83416457-83416476	None:intergenic	40.0%
	CCACCAAAATTGAGACTTTG+AGG	-	chr4.3:83416767-83416786	MS.gene33475:intron	40.0%
	CCTGATAATACTTCACAACC+TGG	-	chr4.3:83415937-83415956	MS.gene33475:CDS	40.0%
	GATAATACTTCACAACCTGG+AGG	-	chr4.3:83415940-83415959	MS.gene33475:CDS	40.0%
	GATGCTAGGGACTAATACAA+AGG	+	chr4.3:83416657-83416676	None:intergenic	40.0%
	GGACTATAATGTTAGTCAGG+TGG	-	chr4.3:83416418-83416437	MS.gene33475:intron	40.0%
	TGGAAGAAAGTTGCAGTTCT+TGG	-	chr4.3:83417492-83417511	MS.gene33475:CDS	40.0%
!	CCAGGTTGTGAAGTATTATC+AGG	+	chr4.3:83415940-83415959	None:intergenic	40.0%
!	CCTCAAAGTCTCAATTTTGG+TGG	+	chr4.3:83416770-83416789	None:intergenic	40.0%
	CTTCTTCTTGTGTTGTGGTG+GGG	+	chr4.3:83415877-83415896	None:intergenic	45.0%
	CTTTCGTTCTCAACCTCCAT+GGG	+	chr4.3:83416503-83416522	None:intergenic	45.0%
	GAGTGAGATGCTAGCATTTG+AGG	-	chr4.3:83417176-83417195	MS.gene33475:intron	45.0%
	GGTCCAAATGACTGAAGTAG+CGG	-	chr4.3:83416570-83416589	MS.gene33475:intron	45.0%
	GTCCAAATGACTGAAGTAGC+GGG	-	chr4.3:83416571-83416590	MS.gene33475:intron	45.0%
	GTGCAGAGTAGTAAAAGTGG+TGG	+	chr4.3:83415854-83415873	None:intergenic	45.0%
	GTTTCTCAGATACTCCTACG+GGG	+	chr4.3:83416455-83416474	None:intergenic	45.0%
	TCCAAATGACTGAAGTAGCG+GGG	-	chr4.3:83416572-83416591	MS.gene33475:intron	45.0%
	TTCTTCTTGTGTTGTGGTGG+GGG	+	chr4.3:83415876-83415895	None:intergenic	45.0%
!	CAAGTTGAGCTAGTAGCTCT+TGG	+	chr4.3:83415978-83415997	None:intergenic	45.0%
!!	GTGGTGGTGTTGATAGAAGA+AGG	+	chr4.3:83415838-83415857	None:intergenic	45.0%
	AATCCTAGGGGAGTAACCCA+TGG	-	chr4.3:83416484-83416503	MS.gene33475:intron	50.0%
	CCATGGAGGTTGAGAACGAA+AGG	-	chr4.3:83416501-83416520	MS.gene33475:intron	50.0%
	CCTTTCGTTCTCAACCTCCA+TGG	+	chr4.3:83416504-83416523	None:intergenic	50.0%
	CTCACCGTGATTAGAGCCTT+TGG	+	chr4.3:83416623-83416642	None:intergenic	50.0%
	GGGGTGCAGAGTAGTAAAAG+TGG	+	chr4.3:83415857-83415876	None:intergenic	50.0%
	TCCCCGCTACTTCAGTCATT+TGG	+	chr4.3:83416576-83416595	None:intergenic	50.0%
	TGGAAGCAATTTGACCCCGT+AGG	-	chr4.3:83416438-83416457	MS.gene33475:intron	50.0%
!	GGTGCCAAAGGCTCTAATCA+CGG	-	chr4.3:83416616-83416635	MS.gene33475:intron	50.0%
!	TGGACTCATTGTGGTGCCAA+AGG	-	chr4.3:83416604-83416623	MS.gene33475:intron	50.0%
!!	ATGCCATGGTGGACTCATTG+TGG	-	chr4.3:83416595-83416614	MS.gene33475:intron	50.0%
!!	TGGCTTTGAACATCACCTCC+AGG	+	chr4.3:83415958-83415977	None:intergenic	50.0%
	GCACCACAATGAGTCCACCA+TGG	+	chr4.3:83416601-83416620	None:intergenic	55.0%
	CCTAGGGGAGTAACCCATGG+AGG	-	chr4.3:83416487-83416506	MS.gene33475:intron	60.0%
!	AAGTAGCGGGGATGCCATGG+TGG	-	chr4.3:83416584-83416603	MS.gene33475:intron	60.0%
!	CCTCCATGGGTTACTCCCCT+AGG	+	chr4.3:83416490-83416509	None:intergenic	60.0%
!	CTGAAGTAGCGGGGATGCCA+TGG	-	chr4.3:83416581-83416600	MS.gene33475:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	83415796	83417593	83415796	ID=MS.gene33475
chr4.3	mRNA	83415796	83417593	83415796	ID=MS.gene33475.t1;Parent=MS.gene33475
chr4.3	exon	83417246	83417593	83417246	ID=MS.gene33475.t1.exon1;Parent=MS.gene33475.t1
chr4.3	CDS	83417246	83417593	83417246	ID=cds.MS.gene33475.t1;Parent=MS.gene33475.t1
chr4.3	exon	83415796	83416230	83415796	ID=MS.gene33475.t1.exon2;Parent=MS.gene33475.t1
chr4.3	CDS	83415796	83416230	83415796	ID=cds.MS.gene33475.t1;Parent=MS.gene33475.t1

Gene Sequence

>MS.gene33475

ATGATTGCTCTCAAAGCCATATTTCACCCTTCCTTCTATCCTTCTTCTATCAACACCACCACTTTTACTACTCTGCACCCCCACCACAACACAAGAAGAAGTTCTGTTTTTCTCTGTCTTTGTACCAACTCCAATGATGAACCTGATAATACTTCACAACCTGGAGGTGATGTTCAAAGCCAAGAGCTACTAGCTCAACTTGCAATGCTTGAGACAGAAAAAGTTCGTCTTACGGATTATTTGGATGAAAGATCTGAATACTTGACACAGTTTGGTGAAGAAGCTAAAGCTGAAATTGATAAGATTGGTGAAGATGCTCTTAAAGGATTGGATGAAGCTAGTGATAGAGTATGTATGCACTTTTCACTCACTATTTACTTGTTCAATTTGTTAACCATGCATAGATTCTAGCTAGCTACAGAGTTATTCATTTTAGTACTTTACATTCCAGTAAACCATAATTCAGTTTTTAAAGTATATGAACATAACAAATAATTGTTAAAGTATGTACAATTTATCTTGTTCTTTAAAGTATATGAAAATTCATTATGTTAATCCCTAGTAGGAACTATACTTTAAAATTATTTATTTTATATACTTTAGATAAAATGAGAGAGAGATTGGACTATAATGTTAGTCAGGTGGAAGCAATTTGACCCCGTAGGAGTATCTGAGAAACTGTAGTTTGAATCCTAGGGGAGTAACCCATGGAGGTTGAGAACGAAAGGATAAAATATTATTTAATCAGTCGAATTGAGAATTAGTCTCATAGTCGGTCCAAATGACTGAAGTAGCGGGGATGCCATGGTGGACTCATTGTGGTGCCAAAGGCTCTAATCACGGTGAGCATATGAAAATCCTTTGTATTAGTCCCTAGCATCTTGACAAAACAAAGTCTATCTAAAGTGACGAATTTTATTTAATTTTGAGATAATCGTTTTTTTTTATTTTTTTGAAGAAGCTAAACTAACCCACCAAAATTGAGACTTTGAGGAGAAGCATACTCATTATTTTTAAATACTATAGAGACTAAAGTTGAAGATAGTGATACTTTAGAAACTAAAATTGAAGATAGCGATACTTTAGAGACTAAATTGATAATGTATTCTCTTACAATCCATATTTTTTTATAAGATATGTTAATGTACTTTTAATTCTATTTTAATTGTTTAATTATTGATTTTGTCAGAAAAATTGTTTAATTATTGATTGATTTCTTAGATTATATGCTTACTTTGTACACTTATCATATGGAGTATAGAATATACAAACGCAAATATGCCTGTTAAAAGCAGTACTTATGCAAAATTTGCTTGAAAATTACTTCAATAATGACCCTTTTACATTCATTTGTGATTAATAGATAACAGCAAAAATAGAGAGTGAGATGCTAGCATTTGAGGAATCAAATGAACTAGACAGAGTAGAGTTTGAGGAAAGTGAAAGCAAAGTAATGGAGATTGAAGGACAAATGGAAGTTGACAGAAATGAAGGACTATTCTTTAAGAACTTAGGACAGAAAGGACCTAATGTTGATAAAGCAAAAGCCAAAGAAGAAATAGAAAAGATGAAAGATGTAACAACAAATGAGGAAAATGGAAGAAAAACAAGGAAAAATGTTTACTTATTCTTCATTGGTCTTTTTACATATGGAATAGTTGGTTCTATTAATGTCTCATCATTAAGTAGTACTGATTGGAAGAAAGTTGCAGTTCTTGGAGCTATTCTTGTGGCTTTGTTTTCTCAGTTCATTTATGAACAAAATAAAGACAATAATCAGAAAGATGATGAACAATGA

Protein sequence

>MS.gene33475.t1

MIALKAIFHPSFYPSSINTTTFTTLHPHHNTRRSSVFLCLCTNSNDEPDNTSQPGGDVQSQELLAQLAMLETEKVRLTDYLDERSEYLTQFGEEAKAEIDKIGEDALKGLDEASDRITAKIESEMLAFEESNELDRVEFEESESKVMEIEGQMEVDRNEGLFFKNLGQKGPNVDKAKAKEEIEKMKDVTTNEENGRKTRKNVYLFFIGLFTYGIVGSINVSSLSSTDWKKVAVLGAILVALFSQFIYEQNKDNNQKDDEQ