Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67875.t1 | XP_003594616.2 | 90.8 | 295 | 25 | 1 | 1 | 293 | 1 | 295 | 1.80E-142 | 515.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67875.t1 | Q9FI13 | 62.6 | 246 | 91 | 1 | 32 | 276 | 23 | 268 | 6.0e-83 | 308.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67875.t1 | G7IMN1 | 90.8 | 295 | 25 | 1 | 1 | 293 | 1 | 295 | 1.3e-142 | 515.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene67875 | 0.817783 | 2.76E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene67875 | 0.869852 | 2.27E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene67875 | 0.849286 | 3.56E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene67875 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene67875 | 0.87639 | 1.45E-68 | -1.69E-46 |
| MS.gene049662 | MS.gene67875 | 0.866926 | 1.99E-65 | -1.69E-46 |
| MS.gene049758 | MS.gene67875 | 0.804583 | 2.01E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene67875 | 0.824099 | 9.70E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene67875 | 0.809219 | 2.11E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene67875 | 0.846118 | 2.66E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene67875 | 0.891557 | 3.56E-74 | -1.69E-46 |
| MS.gene050397 | MS.gene67875 | 0.825608 | 4.27E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene67875 | 0.806978 | 6.33E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene67875 | 0.851393 | 9.14E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene67875 | 0.804805 | 1.81E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene67875 | 0.830759 | 2.45E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene67875 | 0.826367 | 2.82E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene67875 | 0.827406 | 1.59E-54 | -1.69E-46 |
| MS.gene050783 | MS.gene67875 | 0.870801 | 1.11E-66 | -1.69E-46 |
| MS.gene050812 | MS.gene67875 | 0.806161 | 9.41E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene67875 | 0.894815 | 1.73E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene67875 | 0.830134 | 3.48E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene67875 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene67875 | 0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene67875 | 0.81973 | 9.96E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene67875 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene67875 | 0.832669 | 8.28E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene67875 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene67875 | 0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene67875 | 0.870749 | 1.15E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene67875 | 0.843816 | 1.11E-58 | -1.69E-46 |
| MS.gene052253 | MS.gene67875 | 0.878771 | 2.14E-69 | -1.69E-46 |
| MS.gene052290 | MS.gene67875 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene67875 | 0.851636 | 7.80E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene67875 | 0.860338 | 2.21E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene67875 | 0.864168 | 1.48E-64 | -1.69E-46 |
| MS.gene052340 | MS.gene67875 | 0.804463 | 2.13E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene67875 | 0.834901 | 2.29E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene67875 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene67875 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene67875 | 0.821709 | 3.49E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene67875 | 0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene67875 | 0.801577 | 8.43E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene67875 | 0.827497 | 1.51E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene67875 | 0.828533 | 8.53E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene67875 | 0.853518 | 2.27E-61 | -1.69E-46 |
| MS.gene054011 | MS.gene67875 | 0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene67875 | 0.800936 | 1.14E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene67875 | 0.887152 | 1.83E-72 | -1.69E-46 |
| MS.gene054376 | MS.gene67875 | 0.840954 | 6.37E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene67875 | 0.800028 | 1.75E-48 | -1.69E-46 |
| MS.gene05455 | MS.gene67875 | 0.823654 | 1.23E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene67875 | 0.85521 | 7.35E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene67875 | 0.852445 | 4.59E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene67875 | 0.855336 | 6.76E-62 | -1.69E-46 |
| MS.gene054917 | MS.gene67875 | 0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene67875 | 0.80282 | 4.68E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene67875 | 0.820652 | 6.12E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene67875 | 0.815611 | 8.46E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene67875 | 0.849853 | 2.48E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene67875 | 0.821744 | 3.43E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene67875 | 0.855513 | 6.00E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene67875 | 0.841336 | 5.06E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene67875 | 0.827646 | 1.39E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene67875 | 0.825107 | 5.61E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene67875 | 0.853712 | 1.99E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene67875 | 0.866607 | 2.52E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene67875 | 0.847519 | 1.10E-59 | -1.69E-46 |
| MS.gene055604 | MS.gene67875 | 0.812227 | 4.71E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene67875 | 0.826793 | 2.23E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene67875 | 0.813848 | 2.08E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene67875 | 0.825448 | 4.66E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene67875 | 0.847078 | 1.45E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene67875 | 0.832858 | 7.44E-56 | -1.69E-46 |
| MS.gene056452 | MS.gene67875 | 0.815828 | 7.57E-52 | -1.69E-46 |
| MS.gene056497 | MS.gene67875 | 0.822455 | 2.35E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene67875 | 0.834993 | 2.17E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene67875 | 0.839072 | 1.97E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene67875 | 0.804653 | 1.95E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene67875 | 0.804203 | 2.42E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene67875 | 0.82838 | 9.29E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene67875 | 0.85515 | 7.65E-62 | -1.69E-46 |
| MS.gene057121 | MS.gene67875 | 0.819504 | 1.12E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene67875 | 0.844416 | 7.66E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene67875 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene67875 | 0.835847 | 1.32E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene67875 | 0.851742 | 7.28E-61 | -1.69E-46 |
| MS.gene057207 | MS.gene67875 | 0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene057245 | MS.gene67875 | 0.826857 | 2.16E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene67875 | 0.852599 | 4.15E-61 | -1.69E-46 |
| MS.gene05733 | MS.gene67875 | 0.821506 | 3.89E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene67875 | 0.809013 | 2.33E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene67875 | 0.837147 | 6.17E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene67875 | 0.828448 | 8.94E-55 | -1.69E-46 |
| MS.gene057825 | MS.gene67875 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene057845 | MS.gene67875 | 0.809022 | 2.32E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene67875 | 0.853862 | 1.80E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene67875 | 0.82321 | 1.57E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene67875 | 0.814887 | 1.23E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene67875 | 0.829893 | 3.99E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene67875 | 0.815605 | 8.49E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene67875 | 0.8363 | 1.01E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene67875 | 0.852132 | 5.64E-61 | -1.69E-46 |
| MS.gene058365 | MS.gene67875 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene67875 | 0.90607 | 2.20E-80 | -1.69E-46 |
| MS.gene058787 | MS.gene67875 | 0.824604 | 7.38E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene67875 | 0.851134 | 1.08E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene67875 | 0.832798 | 7.70E-56 | -1.69E-46 |
| MS.gene058993 | MS.gene67875 | 0.831249 | 1.86E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene67875 | 0.855243 | 7.19E-62 | -1.69E-46 |
| MS.gene059420 | MS.gene67875 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene67875 | 0.815783 | 7.75E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene67875 | 0.85373 | 1.97E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene67875 | 0.867608 | 1.21E-65 | -1.69E-46 |
| MS.gene05959 | MS.gene67875 | 0.822462 | 2.34E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene67875 | 0.831622 | 1.50E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene67875 | 0.868471 | 6.37E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene67875 | 0.860178 | 2.48E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene67875 | 0.859385 | 4.29E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene67875 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene67875 | 0.824998 | 5.95E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene67875 | 0.83366 | 4.69E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene67875 | 0.850358 | 1.79E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene67875 | 0.839067 | 1.98E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene67875 | 0.827549 | 1.47E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene67875 | 0.806117 | 9.61E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene67875 | 0.813293 | 2.76E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene67875 | 0.862598 | 4.52E-64 | -1.69E-46 |
| MS.gene061051 | MS.gene67875 | -0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene67875 | 0.847203 | 1.34E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67875.t1 | MTR_2g032540 | 93.581 | 296 | 15 | 3 | 1 | 293 | 1 | 295 | 0.0 | 536 |
| MS.gene67875.t1 | MTR_1g108440 | 31.535 | 241 | 151 | 4 | 49 | 286 | 39 | 268 | 4.75e-29 | 112 |
| MS.gene67875.t1 | MTR_7g114900 | 29.225 | 284 | 176 | 9 | 6 | 286 | 19 | 280 | 3.76e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67875.t1 | AT5G44520 | 58.123 | 277 | 106 | 2 | 1 | 276 | 1 | 268 | 2.84e-110 | 321 |
| MS.gene67875.t1 | AT5G44520 | 58.123 | 277 | 106 | 2 | 1 | 276 | 31 | 298 | 3.69e-110 | 322 |
| MS.gene67875.t1 | AT3G04790 | 30.345 | 290 | 178 | 9 | 3 | 286 | 5 | 276 | 2.39e-26 | 105 |
| MS.gene67875.t1 | AT2G01290 | 30.579 | 242 | 151 | 6 | 49 | 286 | 36 | 264 | 1.09e-24 | 100 |
| MS.gene67875.t1 | AT1G71100 | 29.218 | 243 | 160 | 5 | 49 | 287 | 32 | 266 | 4.12e-23 | 96.3 |
Find 78 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTCACCAACTTCTTTAT+TGG | 0.125915 | 2.4:-57925332 | MS.gene67875:CDS |
| AATAATGAACACTAGTTTAT+TGG | 0.142549 | 2.4:+57923213 | None:intergenic |
| GGGACATTTGTTGCTATAAT+TGG | 0.176637 | 2.4:-57923395 | MS.gene67875:CDS |
| ACTAGCCTTCTCTTGGATTA+TGG | 0.206253 | 2.4:+57923346 | None:intergenic |
| GGGCATCATTCTAACAAAAT+TGG | 0.210497 | 2.4:+57925276 | None:intergenic |
| TTTATTGGCGTTATTCAGTA+TGG | 0.286944 | 2.4:+57923228 | None:intergenic |
| TCCAAATGGGTTGAACGTTT+TGG | 0.288932 | 2.4:-57921537 | MS.gene67875:CDS |
| TTGGGGTCTGGTCATGCTTC+TGG | 0.291464 | 2.4:-57924114 | MS.gene67875:CDS |
| TCCAAAACGTTCAACCCATT+TGG | 0.340232 | 2.4:+57921536 | None:intergenic |
| GGTAATTTGAAAGGCATAGT+AGG | 0.348722 | 2.4:-57924054 | MS.gene67875:CDS |
| CTTACAGACTGAATTAAAAC+TGG | 0.355408 | 2.4:+57923151 | None:intergenic |
| GAGATTGACGATATGTTTCT+TGG | 0.357712 | 2.4:-57923030 | MS.gene67875:CDS |
| GGTATGGCCATTCAGCATTT+AGG | 0.364770 | 2.4:-57924093 | MS.gene67875:CDS |
| AACTTACCAAGGCTTGGTAT+TGG | 0.380544 | 2.4:+57922464 | None:intergenic |
| AAAATCCTTGATAAAATTGA+TGG | 0.403326 | 2.4:-57922359 | MS.gene67875:CDS |
| CTTCTTTCCAATAAAGAAGT+TGG | 0.407706 | 2.4:+57925325 | None:intergenic |
| AATGGCATGGTTGTAGGATT+GGG | 0.414310 | 2.4:-57924132 | MS.gene67875:CDS |
| GGCATCATTCTAACAAAATT+GGG | 0.432006 | 2.4:+57925277 | None:intergenic |
| TATAGCAACTAGCCTTCTCT+TGG | 0.433067 | 2.4:+57923339 | None:intergenic |
| GTGGTAATTGCATCTCCAAA+TGG | 0.437485 | 2.4:-57921551 | MS.gene67875:CDS |
| AAATGGCATGGTTGTAGGAT+TGG | 0.442984 | 2.4:-57924133 | MS.gene67875:CDS |
| TCAAATTACCATGACGAAGC+TGG | 0.449566 | 2.4:+57924067 | None:intergenic |
| GCTTCCATAGCTTCTTCTAC+AGG | 0.450670 | 2.4:-57925364 | MS.gene67875:CDS |
| CTTCCAGACCACCTTTGTAC+TGG | 0.454820 | 2.4:+57923182 | None:intergenic |
| TGTGGAGAAGACCAGCTATT+GGG | 0.457431 | 2.4:-57922565 | MS.gene67875:CDS |
| GCAAGTGAAGCAGCAAAGGC+TGG | 0.460488 | 2.4:-57923793 | MS.gene67875:CDS |
| GTCTGGTCATGCTTCTGGTA+TGG | 0.462156 | 2.4:-57924109 | MS.gene67875:CDS |
| AGCAAAGGCTGGGATTCCTT+TGG | 0.462918 | 2.4:-57923782 | MS.gene67875:CDS |
| ATGGTTGTAGGATTGGGGTC+TGG | 0.471721 | 2.4:-57924126 | MS.gene67875:CDS |
| AAGCCCTGTAGAAGAAGCTA+TGG | 0.477415 | 2.4:+57925360 | None:intergenic |
| TTCCTTGCAGCTCAATTGGT+TGG | 0.479261 | 2.4:-57923064 | MS.gene67875:intron |
| GGACCTGCTTGCCCAATAGC+TGG | 0.480422 | 2.4:+57922554 | None:intergenic |
| CTTCCATAGCTTCTTCTACA+GGG | 0.481289 | 2.4:-57925363 | MS.gene67875:CDS |
| GACTGCAGATGTAGTGGGTT+AGG | 0.487152 | 2.4:-57921507 | None:intergenic |
| AAACCAGTACAAAGGTGGTC+TGG | 0.488741 | 2.4:-57923185 | MS.gene67875:CDS |
| GTGTGGAGAAGACCAGCTAT+TGG | 0.489328 | 2.4:-57922566 | MS.gene67875:CDS |
| TGGTAATTGCATCTCCAAAT+GGG | 0.508882 | 2.4:-57921550 | MS.gene67875:CDS |
| CAGTGTATTGAGCTGCTTGG+AGG | 0.509994 | 2.4:+57925221 | None:intergenic |
| CTTCGTCATGGTAATTTGAA+AGG | 0.511839 | 2.4:-57924063 | MS.gene67875:CDS |
| AGACCAGCTATTGGGCAAGC+AGG | 0.523384 | 2.4:-57922557 | MS.gene67875:CDS |
| GTAATTTGAAAGGCATAGTA+GGG | 0.528315 | 2.4:-57924053 | MS.gene67875:CDS |
| GGTGACTTTCCACTGGTCAC+AGG | 0.529692 | 2.4:-57922524 | MS.gene67875:CDS |
| AGGCAGAACTTACCAAGGCT+TGG | 0.536554 | 2.4:+57922458 | None:intergenic |
| TGCACACTTGAGAATTGTCT+TGG | 0.555235 | 2.4:+57923752 | None:intergenic |
| TTTCCACTGGTCACAGGGGA+AGG | 0.560023 | 2.4:-57922518 | MS.gene67875:CDS |
| ACATCTCCAATACCAAGCCT+TGG | 0.560116 | 2.4:-57922470 | MS.gene67875:intron |
| CTGGCGACCTAAATGCTGAA+TGG | 0.561942 | 2.4:+57924086 | None:intergenic |
| AAGTGCAAGTGAAGCAGCAA+AGG | 0.564860 | 2.4:-57923797 | MS.gene67875:CDS |
| CAAGTGAAGCAGCAAAGGCT+GGG | 0.565259 | 2.4:-57923792 | MS.gene67875:CDS |
| TGTCCCTTCTTCTACACCAT+CGG | 0.571677 | 2.4:+57923412 | None:intergenic |
| ATTGGGCAAGCAGGTCCACT+AGG | 0.571854 | 2.4:-57922548 | MS.gene67875:CDS |
| CAAATTGACTGCAGATGTAG+TGG | 0.573359 | 2.4:-57921513 | MS.gene67875:CDS |
| ATGCCGATGGTGTAGAAGAA+GGG | 0.574527 | 2.4:-57923415 | MS.gene67875:CDS |
| GTGACTTTCCACTGGTCACA+GGG | 0.576961 | 2.4:-57922523 | MS.gene67875:CDS |
| CAGTACAAAGGTGGTCTGGA+AGG | 0.578306 | 2.4:-57923181 | MS.gene67875:CDS |
| ATACAGTGTATTGAGCTGCT+TGG | 0.600416 | 2.4:+57925218 | None:intergenic |
| TTAGGTCGCCAGCTTCGTCA+TGG | 0.602568 | 2.4:-57924075 | MS.gene67875:CDS |
| ACTAGGAGGTGACTTTCCAC+TGG | 0.606323 | 2.4:-57922531 | MS.gene67875:CDS |
| GGAATCCATAATCCAAGAGA+AGG | 0.609640 | 2.4:-57923351 | MS.gene67875:intron |
| TGTCCTTCCCCTGTGACCAG+TGG | 0.609659 | 2.4:+57922515 | None:intergenic |
| GATGCCGATGGTGTAGAAGA+AGG | 0.611287 | 2.4:-57923416 | MS.gene67875:CDS |
| ATGGCATGGTTGTAGGATTG+GGG | 0.624252 | 2.4:-57924131 | MS.gene67875:CDS |
| TTGTCTTGGTAGGTATCCAA+AGG | 0.624910 | 2.4:+57923766 | None:intergenic |
| CACTTGAGAATTGTCTTGGT+AGG | 0.625596 | 2.4:+57923756 | None:intergenic |
| GTCATCGAGACAAGAGCGAG+TGG | 0.625671 | 2.4:+57925255 | None:intergenic |
| ATTGAAGAAAACCAGTACAA+AGG | 0.633072 | 2.4:-57923193 | MS.gene67875:CDS |
| ACGTCGGAAATTACAAAGTG+AGG | 0.643680 | 2.4:-57923372 | MS.gene67875:CDS |
| TTTGTAATGCAGATGTACAG+TGG | 0.647555 | 2.4:-57921570 | MS.gene67875:intron |
| AGTGGAAAGTCACCTCCTAG+TGG | 0.652713 | 2.4:+57922533 | None:intergenic |
| TATGTTTCTTGGTGATGCTG+AGG | 0.661092 | 2.4:-57923019 | MS.gene67875:intron |
| GGGCAAGCAGGTCCACTAGG+AGG | 0.661196 | 2.4:-57922545 | MS.gene67875:CDS |
| GAAGAAAACCAGTACAAAGG+TGG | 0.661605 | 2.4:-57923190 | MS.gene67875:CDS |
| TCATCGAGACAAGAGCGAGT+GGG | 0.662888 | 2.4:+57925256 | None:intergenic |
| ATTGCATTTGATGATGCCGA+TGG | 0.665413 | 2.4:-57923428 | MS.gene67875:CDS |
| TTGTTGCTATAATTGGACGT+CGG | 0.672724 | 2.4:-57923388 | MS.gene67875:CDS |
| ATTGATGGTGTTGCAGACCA+TGG | 0.679648 | 2.4:-57922344 | MS.gene67875:CDS |
| AAATTGACTGCAGATGTAGT+GGG | 0.681003 | 2.4:-57921512 | MS.gene67875:CDS |
| TGACTTTCCACTGGTCACAG+GGG | 0.738162 | 2.4:-57922522 | MS.gene67875:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAATTACATTTAAATTAT+GGG | - | chr2.4:57922249-57922268 | MS.gene67875:intron | 10.0% |
| !!! | TAAAAAAGTAAATTTAAGTT+TGG | - | chr2.4:57923324-57923343 | MS.gene67875:intron | 10.0% |
| !!! | TTTAATATTTTTGTCTTAAA+AGG | + | chr2.4:57924756-57924775 | None:intergenic | 10.0% |
| !! | GGTTAATTACATTTAAATTA+TGG | - | chr2.4:57922248-57922267 | MS.gene67875:intron | 15.0% |
| !! | TCTAATTATATAAAAACAAC+AGG | + | chr2.4:57924808-57924827 | None:intergenic | 15.0% |
| !!! | TCATGTAATTATTAGTTTTT+TGG | - | chr2.4:57924095-57924114 | MS.gene67875:CDS | 15.0% |
| !!! | TTTTTTCAATTAAGATTGTA+GGG | - | chr2.4:57922036-57922055 | MS.gene67875:intron | 15.0% |
| !!! | TTTTTTTCAATTAAGATTGT+AGG | - | chr2.4:57922035-57922054 | MS.gene67875:intron | 15.0% |
| !! | AAAATCCTTGATAAAATTGA+TGG | - | chr2.4:57924516-57924535 | MS.gene67875:intron | 20.0% |
| !! | ATTTCTTGATATGTAAAGTT+AGG | - | chr2.4:57923347-57923366 | MS.gene67875:intron | 20.0% |
| !! | TAAATATAATTGTAACGAAC+AGG | + | chr2.4:57924267-57924286 | None:intergenic | 20.0% |
| !! | TAAATGTAATTAACCACTAT+AGG | + | chr2.4:57922243-57922262 | None:intergenic | 20.0% |
| !! | TAATTACAACGTTCAAATTT+AGG | - | chr2.4:57922199-57922218 | MS.gene67875:intron | 20.0% |
| !! | TAGAACTTCTTAACAAATTT+CGG | - | chr2.4:57924824-57924843 | MS.gene67875:intron | 20.0% |
| !! | TTATTTCCATGAGTATATAA+TGG | + | chr2.4:57922130-57922149 | None:intergenic | 20.0% |
| !!! | AAATCATTTTACATTGATAG+TGG | + | chr2.4:57924060-57924079 | None:intergenic | 20.0% |
| !!! | AACTTTTATTTTATGCTCTT+TGG | - | chr2.4:57924588-57924607 | MS.gene67875:intron | 20.0% |
| !!! | AATAATGAACACTAGTTTAT+TGG | + | chr2.4:57923665-57923684 | None:intergenic | 20.0% |
| !!! | AATTTTGATAAATGTTGCAA+AGG | + | chr2.4:57922537-57922556 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTTCCTTCATAT+AGG | - | chr2.4:57922903-57922922 | MS.gene67875:intron | 20.0% |
| !!! | GTATATTTTATCCCTTATTT+CGG | - | chr2.4:57925023-57925042 | MS.gene67875:intron | 20.0% |
| !!! | TAAACATTTTATCAAGAAAC+AGG | - | chr2.4:57922486-57922505 | MS.gene67875:CDS | 20.0% |
| !!! | TTATAAGTTAGCTTATAACT+TGG | - | chr2.4:57921901-57921920 | MS.gene67875:intron | 20.0% |
| !!! | TTTAGATATGTGTTGTTATT+TGG | - | chr2.4:57922699-57922718 | MS.gene67875:intron | 20.0% |
| ! | AAGAAAAACTCAGAAAAAGA+GGG | + | chr2.4:57923895-57923914 | None:intergenic | 25.0% |
| ! | AAGAAATTGTTAGATCTGAT+TGG | - | chr2.4:57923927-57923946 | MS.gene67875:intron | 25.0% |
| ! | AAGACATAAATTTGAGCTTA+TGG | + | chr2.4:57922154-57922173 | None:intergenic | 25.0% |
| ! | AATTAACCATAATTTGAACG+CGG | + | chr2.4:57922184-57922203 | None:intergenic | 25.0% |
| ! | ACATCTGCATTACAAAATAA+TGG | + | chr2.4:57925301-57925320 | None:intergenic | 25.0% |
| ! | ACTCATGGAACTAAATAAAT+AGG | + | chr2.4:57925123-57925142 | None:intergenic | 25.0% |
| ! | CAAAAACCATTATATACTCA+TGG | - | chr2.4:57922121-57922140 | MS.gene67875:intron | 25.0% |
| ! | CAAGAAATACTCAACATTAA+AGG | + | chr2.4:57923174-57923193 | None:intergenic | 25.0% |
| ! | GTTCAAATAAGTGCTTAATT+AGG | + | chr2.4:57922350-57922369 | None:intergenic | 25.0% |
| ! | TAAATAGGTTGCAATTACAT+CGG | + | chr2.4:57925108-57925127 | None:intergenic | 25.0% |
| ! | TATTTCTTAATTGATCCAAG+AGG | - | chr2.4:57924187-57924206 | MS.gene67875:intron | 25.0% |
| ! | TCATTCATCTTCCAATTAAA+TGG | + | chr2.4:57922675-57922694 | None:intergenic | 25.0% |
| ! | TTTATCAACAAAACGTTTCT+TGG | - | chr2.4:57923954-57923973 | MS.gene67875:intron | 25.0% |
| !! | AAAATTGTCGGCATATTTTA+GGG | - | chr2.4:57922993-57923012 | MS.gene67875:intron | 25.0% |
| !! | TATTGATTAAACTCAGAGAA+AGG | + | chr2.4:57922869-57922888 | None:intergenic | 25.0% |
| !! | TTGTTTCTCTTTGTGTAATA+AGG | - | chr2.4:57924287-57924306 | MS.gene67875:intron | 25.0% |
| !!! | TCATGTTTATTTGTTATGCT+TGG | - | chr2.4:57922642-57922661 | MS.gene67875:intron | 25.0% |
| !!! | TGAGTATTTCTTGTTTTAGA+GGG | - | chr2.4:57923181-57923200 | MS.gene67875:CDS | 25.0% |
| !!! | TTATTTTATGCTCTTTGGAT+AGG | - | chr2.4:57924593-57924612 | MS.gene67875:intron | 25.0% |
| !!! | TTGAGTATTTCTTGTTTTAG+AGG | - | chr2.4:57923180-57923199 | MS.gene67875:CDS | 25.0% |
| AAGAGAATGCAGAAAAACAT+GGG | + | chr2.4:57924226-57924245 | None:intergenic | 30.0% | |
| AAGTTGAGAGAGAAAACTAA+CGG | + | chr2.4:57924573-57924592 | None:intergenic | 30.0% | |
| ACAAATGCATCAATGCTAAA+TGG | + | chr2.4:57923041-57923060 | None:intergenic | 30.0% | |
| ATTGAAGAAAACCAGTACAA+AGG | - | chr2.4:57923682-57923701 | MS.gene67875:intron | 30.0% | |
| ATTGATGCATTTGTTTATGC+AGG | - | chr2.4:57923047-57923066 | MS.gene67875:CDS | 30.0% | |
| CAAGATGTTTAAAAGTGACT+AGG | + | chr2.4:57925168-57925187 | None:intergenic | 30.0% | |
| CACTTGTAGAACAACAAAAA+GGG | + | chr2.4:57922580-57922599 | None:intergenic | 30.0% | |
| CTTACAGACTGAATTAAAAC+TGG | + | chr2.4:57923727-57923746 | None:intergenic | 30.0% | |
| CTTCTTTCCAATAAAGAAGT+TGG | + | chr2.4:57921553-57921572 | None:intergenic | 30.0% | |
| GAAGAAAAACTCAGAAAAAG+AGG | + | chr2.4:57923896-57923915 | None:intergenic | 30.0% | |
| GAATTCACCAACTTCTTTAT+TGG | - | chr2.4:57921543-57921562 | MS.gene67875:CDS | 30.0% | |
| GGCATCATTCTAACAAAATT+GGG | + | chr2.4:57921601-57921620 | None:intergenic | 30.0% | |
| GTAAGAGATTTCTTCTTGTT+AGG | + | chr2.4:57923258-57923277 | None:intergenic | 30.0% | |
| GTTCTACTAAATTATCGCAT+TGG | - | chr2.4:57925187-57925206 | MS.gene67875:intron | 30.0% | |
| TAAGAGAATGCAGAAAAACA+TGG | + | chr2.4:57924227-57924246 | None:intergenic | 30.0% | |
| TCACTTGTAGAACAACAAAA+AGG | + | chr2.4:57922581-57922600 | None:intergenic | 30.0% | |
| TGTCTTCATGTAAGCTATTA+TGG | + | chr2.4:57921766-57921785 | None:intergenic | 30.0% | |
| TTATGGAGAGCTTATGAATA+TGG | + | chr2.4:57921749-57921768 | None:intergenic | 30.0% | |
| TTCACCATGTAGAAAATTGT+CGG | - | chr2.4:57922981-57923000 | MS.gene67875:intron | 30.0% | |
| TTCACCATGTTCAAAATTGT+CGG | + | chr2.4:57922929-57922948 | None:intergenic | 30.0% | |
| TTTATTGGCGTTATTCAGTA+TGG | + | chr2.4:57923650-57923669 | None:intergenic | 30.0% | |
| TTTGCTTGATTTCACGATTT+AGG | + | chr2.4:57924859-57924878 | None:intergenic | 30.0% | |
| TTTGGCAAAAAGAAATACGA+AGG | - | chr2.4:57925048-57925067 | MS.gene67875:intron | 30.0% | |
| ! | AAAACAAAGAGGTGCAAAAA+GGG | - | chr2.4:57924992-57925011 | MS.gene67875:intron | 30.0% |
| ! | AAAGTAGCAGATAGTTGATA+AGG | - | chr2.4:57921845-57921864 | MS.gene67875:intron | 30.0% |
| ! | AAATGTTTTGCGAAAAGATG+TGG | + | chr2.4:57922381-57922400 | None:intergenic | 30.0% |
| ! | CAACACCATCAATTTTATCA+AGG | + | chr2.4:57924524-57924543 | None:intergenic | 30.0% |
| ! | GAAAATTGTCGGCATATTTT+AGG | - | chr2.4:57922992-57923011 | MS.gene67875:intron | 30.0% |
| ! | GTAATTTGAAAGGCATAGTA+GGG | - | chr2.4:57922822-57922841 | MS.gene67875:intron | 30.0% |
| ! | TCATTAAAGAAAAGCACGAA+GGG | + | chr2.4:57922512-57922531 | None:intergenic | 30.0% |
| ! | TTATAACTTGGTAGCTGATA+AGG | - | chr2.4:57921913-57921932 | MS.gene67875:intron | 30.0% |
| ! | TTCATTAAAGAAAAGCACGA+AGG | + | chr2.4:57922513-57922532 | None:intergenic | 30.0% |
| ! | TTGGTGGTTATCCATTTAAT+TGG | - | chr2.4:57922661-57922680 | MS.gene67875:intron | 30.0% |
| ! | TTGTTAGGAAAATTTTCACC+AGG | + | chr2.4:57923243-57923262 | None:intergenic | 30.0% |
| ! | TTGTTGTTCTACAAGTGAAT+GGG | - | chr2.4:57922583-57922602 | MS.gene67875:intron | 30.0% |
| !! | GAGATCTTTTGAAAACAAAG+AGG | - | chr2.4:57924981-57925000 | MS.gene67875:intron | 30.0% |
| !! | GATATGTGTTGTTATTTGGT+AGG | - | chr2.4:57922703-57922722 | MS.gene67875:intron | 30.0% |
| !! | TGTTTATTTGTTATGCTTGG+TGG | - | chr2.4:57922645-57922664 | MS.gene67875:intron | 30.0% |
| !! | TTTGTTGTTCTACAAGTGAA+TGG | - | chr2.4:57922582-57922601 | MS.gene67875:intron | 30.0% |
| AAAATTGTCGGCCTATATGA+AGG | + | chr2.4:57922917-57922936 | None:intergenic | 35.0% | |
| AAACAACAGGACAAAAAGCA+GGG | + | chr2.4:57923622-57923641 | None:intergenic | 35.0% | |
| AAATTGACTGCAGATGTAGT+GGG | - | chr2.4:57925363-57925382 | MS.gene67875:CDS | 35.0% | |
| AGAGAATGCAGAAAAACATG+GGG | + | chr2.4:57924225-57924244 | None:intergenic | 35.0% | |
| AGTTGAGAGAGAAAACTAAC+GGG | + | chr2.4:57924572-57924591 | None:intergenic | 35.0% | |
| ATGCTCAAATTCGTGGTTAA+TGG | - | chr2.4:57922277-57922296 | MS.gene67875:intron | 35.0% | |
| ATTAACCACGAATTTGAGCA+TGG | + | chr2.4:57922278-57922297 | None:intergenic | 35.0% | |
| ATTCGTGGTTAATGGAGTAT+TGG | - | chr2.4:57922285-57922304 | MS.gene67875:intron | 35.0% | |
| ATTGAGAAGCTAATCCAAAC+TGG | + | chr2.4:57924897-57924916 | None:intergenic | 35.0% | |
| CAGATTGAATTTGCAGTGTT+TGG | - | chr2.4:57921939-57921958 | MS.gene67875:intron | 35.0% | |
| CTTATCAAACAGACCTATAG+TGG | - | chr2.4:57922227-57922246 | MS.gene67875:intron | 35.0% | |
| CTTCGTCATGGTAATTTGAA+AGG | - | chr2.4:57922812-57922831 | MS.gene67875:intron | 35.0% | |
| GAAAAAGAGGGAATGTTTAG+CGG | + | chr2.4:57923883-57923902 | None:intergenic | 35.0% | |
| GAGATTGACGATATGTTTCT+TGG | - | chr2.4:57923845-57923864 | MS.gene67875:intron | 35.0% | |
| GCAAAAGAAACAAAGGAAAG+TGG | - | chr2.4:57925238-57925257 | MS.gene67875:CDS | 35.0% | |
| GGGCATCATTCTAACAAAAT+TGG | + | chr2.4:57921602-57921621 | None:intergenic | 35.0% | |
| GTGGATACATACGTGAAAAA+TGG | - | chr2.4:57922725-57922744 | MS.gene67875:intron | 35.0% | |
| TACATACGTGAAAAATGGCA+TGG | - | chr2.4:57922730-57922749 | MS.gene67875:intron | 35.0% | |
| TCAAGCAAAGTTCATCAGTA+AGG | - | chr2.4:57924870-57924889 | MS.gene67875:intron | 35.0% | |
| TCCATGAGTATAACATAAGC+AGG | - | chr2.4:57925134-57925153 | MS.gene67875:intron | 35.0% | |
| TCCTGCTTATGTTATACTCA+TGG | + | chr2.4:57925138-57925157 | None:intergenic | 35.0% | |
| TCTCTTTGTGTAATAAGGTG+TGG | - | chr2.4:57924292-57924311 | MS.gene67875:intron | 35.0% | |
| TGATCAGACAATCTTAGTTG+TGG | - | chr2.4:57921816-57921835 | MS.gene67875:intron | 35.0% | |
| TGATTAAACTCAGAGAAAGG+AGG | + | chr2.4:57922866-57922885 | None:intergenic | 35.0% | |
| TGGAAAGAAGAAGAAGAAGA+AGG | - | chr2.4:57921563-57921582 | MS.gene67875:intron | 35.0% | |
| TGGTAATTGCATCTCCAAAT+GGG | - | chr2.4:57925325-57925344 | MS.gene67875:CDS | 35.0% | |
| TTGAGAAGCTAATCCAAACT+GGG | + | chr2.4:57924896-57924915 | None:intergenic | 35.0% | |
| TTGTTGCTATAATTGGACGT+CGG | - | chr2.4:57923487-57923506 | MS.gene67875:intron | 35.0% | |
| TTTGCCAAATGCCGAAATAA+GGG | + | chr2.4:57925037-57925056 | None:intergenic | 35.0% | |
| TTTGTAATGCAGATGTACAG+TGG | - | chr2.4:57925305-57925324 | MS.gene67875:CDS | 35.0% | |
| ! | AATTTTCCTTGCAGCTCAAT+TGG | - | chr2.4:57923807-57923826 | MS.gene67875:CDS | 35.0% |
| ! | ATCAATGCTAAATGGATTCG+TGG | + | chr2.4:57923033-57923052 | None:intergenic | 35.0% |
| ! | GAAAACAAAGAGGTGCAAAA+AGG | - | chr2.4:57924991-57925010 | MS.gene67875:intron | 35.0% |
| ! | GGGACATTTGTTGCTATAAT+TGG | - | chr2.4:57923480-57923499 | MS.gene67875:intron | 35.0% |
| ! | GGTAATTTGAAAGGCATAGT+AGG | - | chr2.4:57922821-57922840 | MS.gene67875:intron | 35.0% |
| ! | GTTGATAAGGTAGCTTACAA+CGG | - | chr2.4:57921858-57921877 | MS.gene67875:intron | 35.0% |
| ! | TATGCCGACAATTTTCTACA+TGG | + | chr2.4:57922988-57923007 | None:intergenic | 35.0% |
| ! | TTATCCCTTATTTCGGCATT+TGG | - | chr2.4:57925030-57925049 | MS.gene67875:intron | 35.0% |
| ! | TTTTATGCTCTTTGGATAGG+TGG | - | chr2.4:57924596-57924615 | MS.gene67875:intron | 35.0% |
| ! | TTTTGCCAAATGCCGAAATA+AGG | + | chr2.4:57925038-57925057 | None:intergenic | 35.0% |
| !! | ATGTGTTGTTATTTGGTAGG+TGG | - | chr2.4:57922706-57922725 | MS.gene67875:intron | 35.0% |
| !! | CCTTTGTTTCTTTTGCTTCT+GGG | + | chr2.4:57925234-57925253 | None:intergenic | 35.0% |
| !! | TCCTTTGTTTCTTTTGCTTC+TGG | + | chr2.4:57925235-57925254 | None:intergenic | 35.0% |
| !!! | TTCTTGTTTTAGAGGGTACT+TGG | - | chr2.4:57923188-57923207 | MS.gene67875:CDS | 35.0% |
| AAATGGCATGGTTGTAGGAT+TGG | - | chr2.4:57922742-57922761 | MS.gene67875:intron | 40.0% | |
| AATGGCATGGTTGTAGGATT+GGG | - | chr2.4:57922743-57922762 | MS.gene67875:intron | 40.0% | |
| ACGTCGGAAATTACAAAGTG+AGG | - | chr2.4:57923503-57923522 | MS.gene67875:intron | 40.0% | |
| ATACAGTGTATTGAGCTGCT+TGG | + | chr2.4:57921660-57921679 | None:intergenic | 40.0% | |
| ATACGCAACATCTCAATTGC+AGG | + | chr2.4:57924440-57924459 | None:intergenic | 40.0% | |
| ATCGTACTAAGTTCAACGAG+TGG | + | chr2.4:57924037-57924056 | None:intergenic | 40.0% | |
| ATGGCATAAGCTGTTTGAAC+TGG | + | chr2.4:57921730-57921749 | None:intergenic | 40.0% | |
| CAAACAACAGGACAAAAAGC+AGG | + | chr2.4:57923623-57923642 | None:intergenic | 40.0% | |
| CAAATTGACTGCAGATGTAG+TGG | - | chr2.4:57925362-57925381 | MS.gene67875:CDS | 40.0% | |
| CACTTGAGAATTGTCTTGGT+AGG | + | chr2.4:57923122-57923141 | None:intergenic | 40.0% | |
| CAGTTACCGCGTTCAAATTA+TGG | - | chr2.4:57922175-57922194 | MS.gene67875:intron | 40.0% | |
| CCCAGAAGCAAAAGAAACAA+AGG | - | chr2.4:57925231-57925250 | MS.gene67875:CDS | 40.0% | |
| CTTCCATAGCTTCTTCTACA+GGG | - | chr2.4:57921512-57921531 | MS.gene67875:CDS | 40.0% | |
| GAAGAAAACCAGTACAAAGG+TGG | - | chr2.4:57923685-57923704 | MS.gene67875:intron | 40.0% | |
| GAATTGCATACAAGGCTTTC+TGG | + | chr2.4:57923221-57923240 | None:intergenic | 40.0% | |
| GAGAATGCAGAAAAACATGG+GGG | + | chr2.4:57924224-57924243 | None:intergenic | 40.0% | |
| GCAGTGTTTGGTAGAATTAG+CGG | - | chr2.4:57921951-57921970 | MS.gene67875:intron | 40.0% | |
| GGAATCCATAATCCAAGAGA+AGG | - | chr2.4:57923524-57923543 | MS.gene67875:intron | 40.0% | |
| GGTCACACTTCTGATCATAT+TGG | - | chr2.4:57924116-57924135 | MS.gene67875:CDS | 40.0% | |
| GTGAAAAATGGCATGGTTGT+AGG | - | chr2.4:57922737-57922756 | MS.gene67875:intron | 40.0% | |
| GTGGTAATTGCATCTCCAAA+TGG | - | chr2.4:57925324-57925343 | MS.gene67875:CDS | 40.0% | |
| GTTGAGAGAGAAAACTAACG+GGG | + | chr2.4:57924571-57924590 | None:intergenic | 40.0% | |
| TCAAATTACCATGACGAAGC+TGG | + | chr2.4:57922811-57922830 | None:intergenic | 40.0% | |
| TCCAAAACGTTCAACCCATT+TGG | + | chr2.4:57925342-57925361 | None:intergenic | 40.0% | |
| TGCACACTTGAGAATTGTCT+TGG | + | chr2.4:57923126-57923145 | None:intergenic | 40.0% | |
| TGGTTGACAATCACACTCAT+TGG | - | chr2.4:57924616-57924635 | MS.gene67875:intron | 40.0% | |
| TTCACCAGGAATTGCATACA+AGG | + | chr2.4:57923229-57923248 | None:intergenic | 40.0% | |
| TTGCAATTACATCGGACTTC+AGG | + | chr2.4:57925100-57925119 | None:intergenic | 40.0% | |
| TTGTCTTGGTAGGTATCCAA+AGG | + | chr2.4:57923112-57923131 | None:intergenic | 40.0% | |
| ! | AAAGCCTTGTATGCAATTCC+TGG | - | chr2.4:57923222-57923241 | MS.gene67875:CDS | 40.0% |
| ! | AACTTACCAAGGCTTGGTAT+TGG | + | chr2.4:57924414-57924433 | None:intergenic | 40.0% |
| ! | TAGGCCGACAATTTTGAACA+TGG | - | chr2.4:57922922-57922941 | MS.gene67875:intron | 40.0% |
| !! | ACTAGCCTTCTCTTGGATTA+TGG | + | chr2.4:57923532-57923551 | None:intergenic | 40.0% |
| !! | ATGGAGTATTGGAGTTACGT+TGG | - | chr2.4:57922296-57922315 | MS.gene67875:intron | 40.0% |
| !! | ATTGCATTTGATGATGCCGA+TGG | - | chr2.4:57923447-57923466 | MS.gene67875:intron | 40.0% |
| !! | TATAGCAACTAGCCTTCTCT+TGG | + | chr2.4:57923539-57923558 | None:intergenic | 40.0% |
| !! | TATGTTTCTTGGTGATGCTG+AGG | - | chr2.4:57923856-57923875 | MS.gene67875:intron | 40.0% |
| !!! | TCCAAATGGGTTGAACGTTT+TGG | - | chr2.4:57925338-57925357 | MS.gene67875:CDS | 40.0% |
| AAACCAGTACAAAGGTGGTC+TGG | - | chr2.4:57923690-57923709 | MS.gene67875:intron | 45.0% | |
| AAGCCCTGTAGAAGAAGCTA+TGG | + | chr2.4:57921518-57921537 | None:intergenic | 45.0% | |
| AAGTGCAAGTGAAGCAGCAA+AGG | - | chr2.4:57923078-57923097 | MS.gene67875:intron | 45.0% | |
| ACATCTCCAATACCAAGCCT+TGG | - | chr2.4:57924405-57924424 | MS.gene67875:intron | 45.0% | |
| ATGCCGATGGTGTAGAAGAA+GGG | - | chr2.4:57923460-57923479 | MS.gene67875:intron | 45.0% | |
| ATGGCATGGTTGTAGGATTG+GGG | - | chr2.4:57922744-57922763 | MS.gene67875:intron | 45.0% | |
| ATTGCAGGCAGAACTTACCA+AGG | + | chr2.4:57924425-57924444 | None:intergenic | 45.0% | |
| GCTTCCATAGCTTCTTCTAC+AGG | - | chr2.4:57921511-57921530 | MS.gene67875:CDS | 45.0% | |
| GGGGACATTAGAAAACCTCT+TGG | + | chr2.4:57924205-57924224 | None:intergenic | 45.0% | |
| GGTAACCATGCTCAAATTCG+TGG | - | chr2.4:57922270-57922289 | MS.gene67875:intron | 45.0% | |
| GGTATGGCCATTCAGCATTT+AGG | - | chr2.4:57922782-57922801 | MS.gene67875:intron | 45.0% | |
| TGTCCCTTCTTCTACACCAT+CGG | + | chr2.4:57923466-57923485 | None:intergenic | 45.0% | |
| TGTGGAGAAGACCAGCTATT+GGG | - | chr2.4:57924310-57924329 | MS.gene67875:intron | 45.0% | |
| TTCATCAGTAAGGCCCAGTT+TGG | - | chr2.4:57924880-57924899 | MS.gene67875:intron | 45.0% | |
| TTCCTTGCAGCTCAATTGGT+TGG | - | chr2.4:57923811-57923830 | MS.gene67875:intron | 45.0% | |
| ! | CAGTATGGACTGCAAACAAC+AGG | + | chr2.4:57923635-57923654 | None:intergenic | 45.0% |
| ! | GGGTTTTCGATATGACACCA+TGG | + | chr2.4:57924551-57924570 | None:intergenic | 45.0% |
| !! | ATTGATGGTGTTGCAGACCA+TGG | - | chr2.4:57924531-57924550 | MS.gene67875:intron | 45.0% |
| !! | GAGTATTGGAGTTACGTTGG+TGG | - | chr2.4:57922299-57922318 | MS.gene67875:intron | 45.0% |
| AAAGGAGGAAGAGCTCACGT+GGG | + | chr2.4:57922851-57922870 | None:intergenic | 50.0% | |
| ACTAGGAGGTGACTTTCCAC+TGG | - | chr2.4:57924344-57924363 | MS.gene67875:intron | 50.0% | |
| AGCAAAGGCTGGGATTCCTT+TGG | - | chr2.4:57923093-57923112 | MS.gene67875:intron | 50.0% | |
| AGGCAGAACTTACCAAGGCT+TGG | + | chr2.4:57924420-57924439 | None:intergenic | 50.0% | |
| AGTGGAAAGTCACCTCCTAG+TGG | + | chr2.4:57924345-57924364 | None:intergenic | 50.0% | |
| ATGGTTGTAGGATTGGGGTC+TGG | - | chr2.4:57922749-57922768 | MS.gene67875:intron | 50.0% | |
| CAAGTGAAGCAGCAAAGGCT+GGG | - | chr2.4:57923083-57923102 | MS.gene67875:intron | 50.0% | |
| CAGTACAAAGGTGGTCTGGA+AGG | - | chr2.4:57923694-57923713 | MS.gene67875:intron | 50.0% | |
| CAGTGTATTGAGCTGCTTGG+AGG | + | chr2.4:57921657-57921676 | None:intergenic | 50.0% | |
| CTGGCGACCTAAATGCTGAA+TGG | + | chr2.4:57922792-57922811 | None:intergenic | 50.0% | |
| CTTCCAGACCACCTTTGTAC+TGG | + | chr2.4:57923696-57923715 | None:intergenic | 50.0% | |
| GATGCCGATGGTGTAGAAGA+AGG | - | chr2.4:57923459-57923478 | MS.gene67875:intron | 50.0% | |
| GTCTGGTCATGCTTCTGGTA+TGG | - | chr2.4:57922766-57922785 | MS.gene67875:intron | 50.0% | |
| GTGACTTTCCACTGGTCACA+GGG | - | chr2.4:57924352-57924371 | MS.gene67875:intron | 50.0% | |
| GTGTGGAGAAGACCAGCTAT+TGG | - | chr2.4:57924309-57924328 | MS.gene67875:intron | 50.0% | |
| TCATCGAGACAAGAGCGAGT+GGG | + | chr2.4:57921622-57921641 | None:intergenic | 50.0% | |
| TGACTTTCCACTGGTCACAG+GGG | - | chr2.4:57924353-57924372 | MS.gene67875:intron | 50.0% | |
| TGCCAACCAATTGAGCTGCA+AGG | + | chr2.4:57923816-57923835 | None:intergenic | 50.0% | |
| AGACCAGCTATTGGGCAAGC+AGG | - | chr2.4:57924318-57924337 | MS.gene67875:intron | 55.0% | |
| ATTGGGCAAGCAGGTCCACT+AGG | - | chr2.4:57924327-57924346 | MS.gene67875:intron | 55.0% | |
| GAAAGGAGGAAGAGCTCACG+TGG | + | chr2.4:57922852-57922871 | None:intergenic | 55.0% | |
| GCAAGTGAAGCAGCAAAGGC+TGG | - | chr2.4:57923082-57923101 | MS.gene67875:intron | 55.0% | |
| GGTGACTTTCCACTGGTCAC+AGG | - | chr2.4:57924351-57924370 | MS.gene67875:intron | 55.0% | |
| GTCATCGAGACAAGAGCGAG+TGG | + | chr2.4:57921623-57921642 | None:intergenic | 55.0% | |
| TTAGGTCGCCAGCTTCGTCA+TGG | - | chr2.4:57922800-57922819 | MS.gene67875:intron | 55.0% | |
| TTGGGGTCTGGTCATGCTTC+TGG | - | chr2.4:57922761-57922780 | MS.gene67875:intron | 55.0% | |
| TTTCCACTGGTCACAGGGGA+AGG | - | chr2.4:57924357-57924376 | MS.gene67875:intron | 55.0% | |
| GGACCTGCTTGCCCAATAGC+TGG | + | chr2.4:57924324-57924343 | None:intergenic | 60.0% | |
| TGTCCTTCCCCTGTGACCAG+TGG | + | chr2.4:57924363-57924382 | None:intergenic | 60.0% | |
| GGGCAAGCAGGTCCACTAGG+AGG | - | chr2.4:57924330-57924349 | MS.gene67875:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 57921508 | 57925389 | 57921508 | ID=MS.gene67875 |
| chr2.4 | mRNA | 57921508 | 57925389 | 57921508 | ID=MS.gene67875.t1;Parent=MS.gene67875 |
| chr2.4 | exon | 57925222 | 57925389 | 57925222 | ID=MS.gene67875.t1.exon1;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57925222 | 57925389 | 57925222 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57924045 | 57924172 | 57924045 | ID=MS.gene67875.t1.exon2;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57924045 | 57924172 | 57924045 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57923759 | 57923828 | 57923759 | ID=MS.gene67875.t1.exon3;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57923759 | 57923828 | 57923759 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57923352 | 57923456 | 57923352 | ID=MS.gene67875.t1.exon4;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57923352 | 57923456 | 57923352 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57923156 | 57923251 | 57923156 | ID=MS.gene67875.t1.exon5;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57923156 | 57923251 | 57923156 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57923020 | 57923076 | 57923020 | ID=MS.gene67875.t1.exon6;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57923020 | 57923076 | 57923020 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57922471 | 57922588 | 57922471 | ID=MS.gene67875.t1.exon7;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57922471 | 57922588 | 57922471 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57922326 | 57922392 | 57922326 | ID=MS.gene67875.t1.exon8;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57922326 | 57922392 | 57922326 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| chr2.4 | exon | 57921508 | 57921580 | 57921508 | ID=MS.gene67875.t1.exon9;Parent=MS.gene67875.t1 |
| chr2.4 | CDS | 57921508 | 57921580 | 57921508 | ID=cds.MS.gene67875.t1;Parent=MS.gene67875.t1 |
| Gene Sequence |
| Protein sequence |
