Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97266.t1 | KEH38065.1 | 91.1 | 528 | 17 | 3 | 1 | 500 | 21 | 546 | 1.10E-253 | 885.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97266.t1 | Q9XQU4 | 83.9 | 528 | 55 | 4 | 2 | 500 | 1 | 527 | 1.2e-237 | 823.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97266.t1 | A0A072VIS8 | 91.1 | 528 | 17 | 3 | 1 | 500 | 21 | 546 | 7.9e-254 | 885.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene97266 | 0.849212 | 3.74E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene97266 | 0.851696 | 7.50E-61 | -1.69E-46 |
| MS.gene049356 | MS.gene97266 | 0.821189 | 4.61E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene97266 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene97266 | 0.863236 | 2.88E-64 | -1.69E-46 |
| MS.gene049661 | MS.gene97266 | 0.845262 | 4.53E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene97266 | 0.832409 | 9.61E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene97266 | 0.836885 | 7.20E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene97266 | 0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene97266 | 0.87941 | 1.28E-69 | -1.69E-46 |
| MS.gene050406 | MS.gene97266 | 0.805147 | 1.54E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene97266 | 0.833002 | 6.85E-56 | -1.69E-46 |
| MS.gene050507 | MS.gene97266 | 0.823909 | 1.07E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene97266 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene97266 | 0.853701 | 2.01E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene97266 | 0.819177 | 1.33E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene97266 | 0.821541 | 3.82E-53 | -1.69E-46 |
| MS.gene050783 | MS.gene97266 | 0.857254 | 1.85E-62 | -1.69E-46 |
| MS.gene050812 | MS.gene97266 | 0.878724 | 2.23E-69 | -1.69E-46 |
| MS.gene05101 | MS.gene97266 | 0.858023 | 1.09E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene97266 | 0.83527 | 1.85E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene97266 | 0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene97266 | 0.855839 | 4.82E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene97266 | 0.840232 | 9.85E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene97266 | 0.867317 | 1.50E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene97266 | 0.822161 | 2.75E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene97266 | 0.847847 | 8.92E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene97266 | 0.869292 | 3.45E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene97266 | 0.834822 | 2.40E-56 | -1.69E-46 |
| MS.gene052290 | MS.gene97266 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene97266 | 0.857028 | 2.16E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene97266 | 0.849869 | 2.45E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene97266 | 0.853123 | 2.94E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene97266 | 0.837124 | 6.26E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene97266 | 0.83208 | 1.16E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene97266 | 0.842096 | 3.19E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene97266 | 0.821556 | 3.79E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene97266 | 0.86321 | 2.93E-64 | -1.69E-46 |
| MS.gene052982 | MS.gene97266 | 0.835279 | 1.84E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene97266 | 0.839162 | 1.87E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene97266 | 0.812571 | 3.96E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene97266 | 0.804006 | 2.66E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene97266 | 0.809342 | 1.98E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene97266 | 0.842453 | 2.56E-58 | -1.69E-46 |
| MS.gene053579 | MS.gene97266 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene97266 | 0.812826 | 3.49E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene97266 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene97266 | 0.836658 | 8.22E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene97266 | 0.902243 | 1.18E-78 | -1.69E-46 |
| MS.gene054376 | MS.gene97266 | 0.81991 | 9.06E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene97266 | 0.820187 | 7.83E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene97266 | 0.837263 | 5.76E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene97266 | 0.83421 | 3.42E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene97266 | 0.839074 | 1.97E-57 | -1.69E-46 |
| MS.gene054955 | MS.gene97266 | 0.817476 | 3.23E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene97266 | 0.80722 | 5.62E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene97266 | 0.842895 | 1.96E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene97266 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene97266 | 0.839436 | 1.59E-57 | -1.69E-46 |
| MS.gene055397 | MS.gene97266 | 0.826509 | 2.61E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene97266 | 0.85752 | 1.54E-62 | -1.69E-46 |
| MS.gene055422 | MS.gene97266 | 0.848206 | 7.10E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene97266 | 0.845634 | 3.59E-59 | -1.69E-46 |
| MS.gene055499 | MS.gene97266 | 0.833645 | 4.74E-56 | -1.69E-46 |
| MS.gene055539 | MS.gene97266 | 0.806094 | 9.72E-50 | -1.69E-46 |
| MS.gene05602 | MS.gene97266 | 0.826333 | 2.87E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene97266 | 0.800836 | 1.20E-48 | -1.69E-46 |
| MS.gene056407 | MS.gene97266 | 0.865098 | 7.55E-65 | -1.69E-46 |
| MS.gene056410 | MS.gene97266 | 0.808188 | 3.50E-50 | -1.69E-46 |
| MS.gene056497 | MS.gene97266 | 0.844482 | 7.36E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene97266 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene97266 | 0.82172 | 3.48E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene97266 | 0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene97266 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene056723 | MS.gene97266 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene97266 | 0.837605 | 4.71E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene97266 | 0.824842 | 6.48E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene97266 | 0.837121 | 6.27E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene97266 | 0.838886 | 2.20E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene97266 | 0.812681 | 3.75E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene97266 | 0.860825 | 1.58E-63 | -1.69E-46 |
| MS.gene057129 | MS.gene97266 | 0.851084 | 1.12E-60 | -1.69E-46 |
| MS.gene057146 | MS.gene97266 | 0.822997 | 1.76E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene97266 | 0.802978 | 4.34E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene97266 | 0.873299 | 1.64E-67 | -1.69E-46 |
| MS.gene05733 | MS.gene97266 | 0.811185 | 7.94E-51 | -1.69E-46 |
| MS.gene05735 | MS.gene97266 | 0.804892 | 1.74E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene97266 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene97266 | 0.805362 | 1.38E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene97266 | 0.806247 | 9.02E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene97266 | 0.844873 | 5.77E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene97266 | 0.855449 | 6.26E-62 | -1.69E-46 |
| MS.gene057845 | MS.gene97266 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene97266 | 0.857977 | 1.13E-62 | -1.69E-46 |
| MS.gene058006 | MS.gene97266 | 0.820939 | 5.26E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene97266 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene97266 | 0.83728 | 5.71E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene97266 | 0.836957 | 6.90E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene97266 | 0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene97266 | 0.814822 | 1.27E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene97266 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene97266 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene97266 | 0.900915 | 4.54E-78 | -1.69E-46 |
| MS.gene058365 | MS.gene97266 | 0.864213 | 1.43E-64 | -1.69E-46 |
| MS.gene058660 | MS.gene97266 | 0.886459 | 3.36E-72 | -1.69E-46 |
| MS.gene058748 | MS.gene97266 | 0.806989 | 6.29E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene97266 | 0.87541 | 3.15E-68 | -1.69E-46 |
| MS.gene058928 | MS.gene97266 | 0.822272 | 2.59E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene97266 | 0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene97266 | 0.84077 | 7.12E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene97266 | 0.834047 | 3.76E-56 | -1.69E-46 |
| MS.gene059141 | MS.gene97266 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene97266 | 0.828802 | 7.34E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene97266 | 0.835358 | 1.76E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene97266 | 0.857529 | 1.53E-62 | -1.69E-46 |
| MS.gene05959 | MS.gene97266 | 0.829807 | 4.19E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene97266 | 0.860054 | 2.70E-63 | -1.69E-46 |
| MS.gene059688 | MS.gene97266 | 0.863443 | 2.48E-64 | -1.69E-46 |
| MS.gene059692 | MS.gene97266 | 0.866497 | 2.73E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene97266 | 0.873664 | 1.23E-67 | -1.69E-46 |
| MS.gene059708 | MS.gene97266 | 0.822453 | 2.35E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene97266 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene97266 | 0.817124 | 3.88E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene97266 | 0.855013 | 8.39E-62 | -1.69E-46 |
| MS.gene060193 | MS.gene97266 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene97266 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene97266 | 0.846708 | 1.83E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene97266 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene97266 | 0.845369 | 4.24E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene97266 | 0.810596 | 1.07E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene97266 | 0.843954 | 1.02E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene97266 | -0.830004 | 3.75E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene97266 | 0.855739 | 5.15E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97266.t1 | MTR_2g460600 | 93.750 | 528 | 3 | 3 | 1 | 500 | 21 | 546 | 0.0 | 964 |
| MS.gene97266.t1 | MTR_7g094800 | 26.488 | 521 | 324 | 16 | 11 | 482 | 21 | 531 | 3.48e-35 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97266.t1 | AT2G18710 | 82.645 | 484 | 71 | 3 | 30 | 500 | 66 | 549 | 0.0 | 796 |
| MS.gene97266.t1 | AT2G31530 | 28.235 | 425 | 267 | 13 | 84 | 482 | 147 | 559 | 5.38e-33 | 132 |
Find 96 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGCTTACCTACCGTTTA+AGG | 0.117513 | 2.1:-39861265 | MS.gene97266:intron |
| GAGGATAGTTCAATTGATTT+TGG | 0.223790 | 2.1:-39862939 | MS.gene97266:CDS |
| TGCACACTTGACTGCATTCC+GGG | 0.270529 | 2.1:-39860342 | MS.gene97266:CDS |
| AGGTTCCATTCCCAAGTTTC+AGG | 0.271250 | 2.1:+39861588 | None:intergenic |
| TCTTACTTGCCAGCTTCTTT+TGG | 0.293036 | 2.1:-39861539 | MS.gene97266:CDS |
| AATCTAGACGCGTAGTTAAT+AGG | 0.304266 | 2.1:+39861315 | None:intergenic |
| TCTTAGTCGAATATCAGTTC+TGG | 0.312877 | 2.1:-39860417 | MS.gene97266:CDS |
| ACTGCATTCCGGGGATTTGC+TGG | 0.320442 | 2.1:-39860332 | MS.gene97266:CDS |
| GCTATCAAAAGTATGTTAAA+TGG | 0.328201 | 2.1:+39860693 | None:intergenic |
| ACATCTATTCTTATTCTTGT+TGG | 0.328592 | 2.1:-39860308 | MS.gene97266:CDS |
| CTGCACACTTGACTGCATTC+CGG | 0.330585 | 2.1:-39860343 | MS.gene97266:CDS |
| AATTGTTCGCTCACATCATC+TGG | 0.339654 | 2.1:+39860633 | None:intergenic |
| CTATTACACTTTCCTACAAC+TGG | 0.344454 | 2.1:-39860658 | MS.gene97266:CDS |
| TCCTTCTTTCTGTTGGTAGT+TGG | 0.350967 | 2.1:-39861455 | MS.gene97266:CDS |
| ACATCATCGTTAGCTCTTCC+TGG | 0.375335 | 2.1:-39861064 | MS.gene97266:CDS |
| GCAGTCTGCTCAACAATTGC+AGG | 0.392772 | 2.1:+39860362 | None:intergenic |
| CAAATTACTGACCTGAAACT+TGG | 0.408846 | 2.1:-39861599 | MS.gene97266:CDS |
| CCGTGATTACAACGTACATT+GGG | 0.408942 | 2.1:-39861625 | MS.gene97266:CDS |
| CTTAGTCGAATATCAGTTCT+GGG | 0.412406 | 2.1:-39860416 | MS.gene97266:CDS |
| TTCTGAAGATCTTGCAACTT+GGG | 0.415468 | 2.1:+39862660 | None:intergenic |
| TTCTTCAAAGGTCCTCTGCC+AGG | 0.418038 | 2.1:-39862912 | MS.gene97266:CDS |
| CATCATCTGGATCCAGTTGT+AGG | 0.418316 | 2.1:+39860646 | None:intergenic |
| CATTGTGTCCTTCTTTCTGT+TGG | 0.429476 | 2.1:-39861462 | MS.gene97266:CDS |
| AGTTGGAATTGTCTATGTTC+AGG | 0.434605 | 2.1:-39861438 | MS.gene97266:intron |
| TTTGGCAGGTCAATAGTTCT+GGG | 0.435453 | 2.1:-39861108 | MS.gene97266:intron |
| AGGAGCAGCAGCTGCAATAG+AGG | 0.436673 | 2.1:-39862958 | MS.gene97266:CDS |
| AAACCTCGAGGAGGAGGAGG+AGG | 0.445397 | 2.1:-39862978 | MS.gene97266:CDS |
| AGACTTGGCATATGCTCTCT+TGG | 0.449449 | 2.1:-39862738 | MS.gene97266:CDS |
| ACCAATACCACCACCAGAAA+AGG | 0.461774 | 2.1:+39862761 | None:intergenic |
| TTTCTTGTATTGTCAAGGCT+TGG | 0.462644 | 2.1:-39862867 | MS.gene97266:CDS |
| TGTTGGATTCGCCATTGTAC+AGG | 0.467660 | 2.1:-39862583 | MS.gene97266:intron |
| TACACTCGATATGCTTCTGT+TGG | 0.467789 | 2.1:-39862600 | MS.gene97266:CDS |
| TAGGGTTTCTTGTATTGTCA+AGG | 0.468985 | 2.1:-39862872 | MS.gene97266:CDS |
| CGGACACACCACCTGGGAGA+AGG | 0.472296 | 2.1:+39863287 | None:intergenic |
| GATGATGTAGAAAATATGAT+AGG | 0.473627 | 2.1:+39861079 | None:intergenic |
| GGTACTTTAGCACGTTTCAC+TGG | 0.478650 | 2.1:-39861043 | MS.gene97266:CDS |
| GGACACACCACCTGGGAGAA+GGG | 0.478694 | 2.1:+39863288 | None:intergenic |
| AAAGATGAGAGGACCTTAAA+CGG | 0.479005 | 2.1:+39861252 | None:intergenic |
| TTTCTGAAGATCTTGCAACT+TGG | 0.479036 | 2.1:+39862659 | None:intergenic |
| TATGTTAAATGGAAGATAGA+AGG | 0.481243 | 2.1:+39860704 | None:intergenic |
| TTAACTCTTCTTCTTCTACA+TGG | 0.487212 | 2.1:-39863034 | MS.gene97266:CDS |
| TGTTGTAAAGTCATTTACAT+AGG | 0.488090 | 2.1:+39861688 | None:intergenic |
| AAGAAGAGTTAATACCTAAC+GGG | 0.496614 | 2.1:+39863045 | None:intergenic |
| TCTGTTATCTTATTGACACT+TGG | 0.501427 | 2.1:-39861650 | MS.gene97266:CDS |
| CAGAAAAGAGAAGGTGAGGC+TGG | 0.502761 | 2.1:-39862642 | MS.gene97266:CDS |
| AGTGTAATAGTAGTTGAAGA+AGG | 0.517143 | 2.1:+39860671 | None:intergenic |
| GCAGAGCCACTCTCTCTGTC+CGG | 0.519848 | 2.1:-39863202 | MS.gene97266:intron |
| TCCGTGATTACAACGTACAT+TGG | 0.519948 | 2.1:-39861626 | MS.gene97266:CDS |
| TTGAGAAACTTCCCTGGCAG+AGG | 0.521457 | 2.1:+39862900 | None:intergenic |
| GTAGCGAATTTCGACCCGTT+AGG | 0.521598 | 2.1:-39863059 | MS.gene97266:CDS |
| GCTGCAGTAGCTTTGAATCC+AGG | 0.527425 | 2.1:-39861001 | MS.gene97266:CDS |
| AATGTAGCTGTACTTCTGCC+TGG | 0.528569 | 2.1:+39860576 | None:intergenic |
| GTTGTAAAGTCATTTACATA+GGG | 0.531063 | 2.1:+39861689 | None:intergenic |
| AAATTACTGACCTGAAACTT+GGG | 0.532762 | 2.1:-39861598 | MS.gene97266:CDS |
| GACACACCACCTGGGAGAAG+GGG | 0.533277 | 2.1:+39863289 | None:intergenic |
| GGTGGTGGTATTGGTAGACT+TGG | 0.533736 | 2.1:-39862753 | MS.gene97266:CDS |
| CTCAACCTCATCTCTCTACC+AGG | 0.538600 | 2.1:-39863166 | MS.gene97266:intron |
| CCCAATGTACGTTGTAATCA+CGG | 0.539847 | 2.1:+39861625 | None:intergenic |
| TCCAACTACCAACAGAAAGA+AGG | 0.539872 | 2.1:+39861454 | None:intergenic |
| GAAGAAGAGTTAATACCTAA+CGG | 0.545383 | 2.1:+39863044 | None:intergenic |
| CTTGGTGTGTATATACCTCT+AGG | 0.546349 | 2.1:-39862849 | MS.gene97266:CDS |
| CAGAAAGAAGGACACAATGA+TGG | 0.551543 | 2.1:+39861466 | None:intergenic |
| ACTGACCTGAAACTTGGGAA+TGG | 0.555203 | 2.1:-39861593 | MS.gene97266:CDS |
| ACAATCTGTGCATTGATGAA+AGG | 0.557062 | 2.1:+39862708 | None:intergenic |
| AATGTCCGACCAAAAGAAGC+TGG | 0.561861 | 2.1:+39861530 | None:intergenic |
| GGTAACAAGTCCGACATAGT+TGG | 0.563139 | 2.1:+39861487 | None:intergenic |
| GTTGAGTGGTAGATATTCTC+CGG | 0.567019 | 2.1:+39863183 | None:intergenic |
| TCTTCAGAAAAGAGAAGGTG+AGG | 0.569860 | 2.1:-39862646 | MS.gene97266:CDS |
| AAGAAGCTTCCCCTTCTCCC+AGG | 0.570059 | 2.1:-39863298 | MS.gene97266:intron |
| CAAGATCTTCAGAAAAGAGA+AGG | 0.570295 | 2.1:-39862651 | MS.gene97266:CDS |
| TCAATTCCACTTGTCAGACC+AGG | 0.572539 | 2.1:-39860594 | MS.gene97266:CDS |
| TTTAATGATGCCAACTATGT+CGG | 0.578808 | 2.1:-39861497 | MS.gene97266:CDS |
| GCACACTTGACTGCATTCCG+GGG | 0.581736 | 2.1:-39860341 | MS.gene97266:CDS |
| TAGATGTTCCAGCAAATCCC+CGG | 0.583086 | 2.1:+39860324 | None:intergenic |
| TCTTCAAAGGTCCTCTGCCA+GGG | 0.584956 | 2.1:-39862911 | MS.gene97266:CDS |
| CTTCTGCCTGGTCTGACAAG+TGG | 0.593403 | 2.1:+39860588 | None:intergenic |
| AGCGAACAATTGAAACGTCA+AGG | 0.598941 | 2.1:-39860621 | MS.gene97266:CDS |
| GTTTGTGAATATCAAAAGAG+AGG | 0.599776 | 2.1:+39861568 | None:intergenic |
| AGGGACGCAGGAAAAGAACT+TGG | 0.600736 | 2.1:+39861708 | None:intergenic |
| ATGAGAGGACCTTAAACGGT+AGG | 0.606091 | 2.1:+39861256 | None:intergenic |
| TAAATTTCTGACCTGTACAA+TGG | 0.607947 | 2.1:+39862572 | None:intergenic |
| TCTAGATTCACCAGCAAAAG+CGG | 0.612020 | 2.1:-39861300 | MS.gene97266:CDS |
| GTGAAACGTGCTAAAGTACC+AGG | 0.612842 | 2.1:+39861046 | None:intergenic |
| AAAAGCTTGAGAAACTTCCC+TGG | 0.613913 | 2.1:+39862894 | None:intergenic |
| TATTCTCCGGACAGAGAGAG+TGG | 0.622305 | 2.1:+39863196 | None:intergenic |
| GGTAGAGAGATGAGGTTGAG+TGG | 0.627551 | 2.1:+39863169 | None:intergenic |
| AAATGACTTTACAACAGAGT+GGG | 0.636424 | 2.1:-39861681 | MS.gene97266:CDS |
| TTGGCAGGTCAATAGTTCTG+GGG | 0.643969 | 2.1:-39861107 | MS.gene97266:intron |
| AGTCATTTACATAGGGACGC+AGG | 0.644501 | 2.1:+39861696 | None:intergenic |
| TAAATGACTTTACAACAGAG+TGG | 0.657979 | 2.1:-39861682 | MS.gene97266:CDS |
| AGATTCACCAGCAAAAGCGG+TGG | 0.659232 | 2.1:-39861297 | MS.gene97266:CDS |
| CGTGATTACAACGTACATTG+GGG | 0.663302 | 2.1:-39861624 | MS.gene97266:CDS |
| GGTGTGTATATACCTCTAGG+TGG | 0.698321 | 2.1:-39862846 | MS.gene97266:CDS |
| GCAGTAGCTTTGAATCCAGG+AGG | 0.714613 | 2.1:-39860998 | MS.gene97266:intron |
| TCTCTGTTAACTCCACCTAG+AGG | 0.718674 | 2.1:+39862834 | None:intergenic |
| TCTAGGTGGAGTTAACAGAG+AGG | 0.738479 | 2.1:-39862832 | MS.gene97266:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATAAAATATAATATA+TGG | - | chr2.1:39863087-39863106 | MS.gene97266:intron | 0.0% |
| !! | AAAAATGTACATTTAAGTAA+AGG | + | chr2.1:39862800-39862819 | None:intergenic | 15.0% |
| !! | AAAATGTACATTTAAGTAAA+GGG | + | chr2.1:39862799-39862818 | None:intergenic | 15.0% |
| !! | ATACAATTCATTTGAAAATT+AGG | + | chr2.1:39860444-39860463 | None:intergenic | 15.0% |
| !! | TTGATTTCAAAATTAATTCA+TGG | + | chr2.1:39861416-39861435 | None:intergenic | 15.0% |
| !!! | ATGAATTAATTTTGAAATCA+AGG | - | chr2.1:39861415-39861434 | MS.gene97266:intron | 15.0% |
| !!! | CAATTTTATTATTATAAACC+CGG | + | chr2.1:39862580-39862599 | None:intergenic | 15.0% |
| !!! | TAAATGTACATTTTTTTTGT+AGG | - | chr2.1:39862805-39862824 | MS.gene97266:CDS | 15.0% |
| !!! | TGAATTAATTTTGAAATCAA+GGG | - | chr2.1:39861416-39861435 | MS.gene97266:intron | 15.0% |
| !! | AAACTTTGAATAAATCATGA+AGG | + | chr2.1:39861240-39861259 | None:intergenic | 20.0% |
| !! | ACAACAACAAAATTATAAAC+TGG | + | chr2.1:39861779-39861798 | None:intergenic | 20.0% |
| !! | AGAAATGTTTGATGAAATAT+AGG | - | chr2.1:39862692-39862711 | MS.gene97266:CDS | 20.0% |
| !! | AGTAGAAAAAGATTTATGTT+AGG | - | chr2.1:39861368-39861387 | MS.gene97266:intron | 20.0% |
| !! | ATATTGTAATTACTGCATTT+AGG | - | chr2.1:39861495-39861514 | MS.gene97266:CDS | 20.0% |
| !! | ATTAAGTGATGTAAAATGAA+TGG | + | chr2.1:39863072-39863091 | None:intergenic | 20.0% |
| !! | ATTTGAAAATTAGGCAAAAA+TGG | + | chr2.1:39860435-39860454 | None:intergenic | 20.0% |
| !! | GTAGAAAAAGATTTATGTTA+GGG | - | chr2.1:39861369-39861388 | MS.gene97266:intron | 20.0% |
| !! | TAAAATATAATATATGGTGC+AGG | - | chr2.1:39863093-39863112 | MS.gene97266:intron | 20.0% |
| !! | TATTGTAATTACTGCATTTA+GGG | - | chr2.1:39861496-39861515 | MS.gene97266:CDS | 20.0% |
| !! | TATTTGAATTCATGAAGAAA+AGG | + | chr2.1:39861052-39861071 | None:intergenic | 20.0% |
| ! | AACATCTACATTGTCAAATT+TGG | + | chr2.1:39862402-39862421 | None:intergenic | 25.0% |
| ! | AAGTAAAGGGAATCAATTTA+TGG | + | chr2.1:39862786-39862805 | None:intergenic | 25.0% |
| ! | ACATCTATTCTTATTCTTGT+TGG | - | chr2.1:39863226-39863245 | MS.gene97266:intron | 25.0% |
| ! | AGTAATTACAATATAGAGGA+GGG | + | chr2.1:39861489-39861508 | None:intergenic | 25.0% |
| ! | ATGCAGTAATTACAATATAG+AGG | + | chr2.1:39861493-39861512 | None:intergenic | 25.0% |
| ! | ATTAATCAGTAAGGAAATCA+AGG | + | chr2.1:39863025-39863044 | None:intergenic | 25.0% |
| ! | CTTGTTGAGATAATGTTAAA+AGG | - | chr2.1:39861290-39861309 | MS.gene97266:CDS | 25.0% |
| ! | GATGATGTAGAAAATATGAT+AGG | + | chr2.1:39862458-39862477 | None:intergenic | 25.0% |
| ! | GTACTACAGTAACATAAAAA+AGG | + | chr2.1:39862314-39862333 | None:intergenic | 25.0% |
| ! | GTTGTAAAGTCATTTACATA+GGG | + | chr2.1:39861848-39861867 | None:intergenic | 25.0% |
| ! | TACAGTAACATAAAAAAGGT+TGG | + | chr2.1:39862310-39862329 | None:intergenic | 25.0% |
| ! | TATAACCAAGAGTCATTAAT+AGG | + | chr2.1:39861536-39861555 | None:intergenic | 25.0% |
| ! | TATCAAATACTATTCGAGTA+AGG | + | chr2.1:39862336-39862355 | None:intergenic | 25.0% |
| ! | TATGTTAAATGGAAGATAGA+AGG | + | chr2.1:39862833-39862852 | None:intergenic | 25.0% |
| ! | TGTTGTAAAGTCATTTACAT+AGG | + | chr2.1:39861849-39861868 | None:intergenic | 25.0% |
| !! | ACAATGTAGATGTTCTATTT+TGG | - | chr2.1:39862408-39862427 | MS.gene97266:intron | 25.0% |
| !! | GCTATCAAAAGTATGTTAAA+TGG | + | chr2.1:39862844-39862863 | None:intergenic | 25.0% |
| !! | TAACTTTAAAGAGTTACTCT+TGG | - | chr2.1:39861452-39861471 | MS.gene97266:CDS | 25.0% |
| !! | TGTTCTTCAATTTTCATTAC+AGG | - | chr2.1:39861796-39861815 | MS.gene97266:intron | 25.0% |
| !!! | TCTTATTCTTTGAGATTCAT+AGG | - | chr2.1:39861206-39861225 | MS.gene97266:intron | 25.0% |
| AAATGACTTTACAACAGAGT+GGG | - | chr2.1:39861853-39861872 | MS.gene97266:intron | 30.0% | |
| AAATTACTGACCTGAAACTT+GGG | - | chr2.1:39861936-39861955 | MS.gene97266:intron | 30.0% | |
| AACCAGCATATTAATCAGTA+AGG | + | chr2.1:39863034-39863053 | None:intergenic | 30.0% | |
| AAGAAGAGTTAATACCTAAC+GGG | + | chr2.1:39860492-39860511 | None:intergenic | 30.0% | |
| AGTGTAATAGTAGTTGAAGA+AGG | + | chr2.1:39862866-39862885 | None:intergenic | 30.0% | |
| ATCTACATTGTCAAATTTGG+AGG | + | chr2.1:39862399-39862418 | None:intergenic | 30.0% | |
| ATGGAAGAGACAAAAGTTTA+AGG | + | chr2.1:39862767-39862786 | None:intergenic | 30.0% | |
| ATTGAACGACTCCTATAATT+CGG | + | chr2.1:39861138-39861157 | None:intergenic | 30.0% | |
| ATTGTCCTATTAATGACTCT+TGG | - | chr2.1:39861528-39861547 | MS.gene97266:CDS | 30.0% | |
| CAAGTGAAAAATGTCTTCAT+AGG | - | chr2.1:39861074-39861093 | MS.gene97266:CDS | 30.0% | |
| CAGTAATTACAATATAGAGG+AGG | + | chr2.1:39861490-39861509 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAATA+TGG | + | chr2.1:39860301-39860320 | None:intergenic | 30.0% | |
| GAAGAAGAGTTAATACCTAA+CGG | + | chr2.1:39860493-39860512 | None:intergenic | 30.0% | |
| GCGACTAAATTACATATTGA+TGG | + | chr2.1:39861565-39861584 | None:intergenic | 30.0% | |
| GTTTGTGAATATCAAAAGAG+AGG | + | chr2.1:39861969-39861988 | None:intergenic | 30.0% | |
| TAAATGACTTTACAACAGAG+TGG | - | chr2.1:39861852-39861871 | MS.gene97266:intron | 30.0% | |
| TAAATTTCTGACCTGTACAA+TGG | + | chr2.1:39860965-39860984 | None:intergenic | 30.0% | |
| TCTGTTATCTTATTGACACT+TGG | - | chr2.1:39861884-39861903 | MS.gene97266:intron | 30.0% | |
| TCTTCATGAATGATTCGTAA+AGG | - | chr2.1:39861105-39861124 | MS.gene97266:intron | 30.0% | |
| TGAAATCAAGGGATATGATT+TGG | - | chr2.1:39861427-39861446 | MS.gene97266:intron | 30.0% | |
| TGGAAGAGACAAAAGTTTAA+GGG | + | chr2.1:39862766-39862785 | None:intergenic | 30.0% | |
| TTAACTCTTCTTCTTCTACA+TGG | - | chr2.1:39860500-39860519 | MS.gene97266:intron | 30.0% | |
| TTTAATGATGCCAACTATGT+CGG | - | chr2.1:39862037-39862056 | MS.gene97266:intron | 30.0% | |
| ! | CAATTTTCATTACAGGCTAT+TGG | - | chr2.1:39861803-39861822 | MS.gene97266:intron | 30.0% |
| ! | GAAGAAGAAGAATATGGTTT+TGG | + | chr2.1:39860295-39860314 | None:intergenic | 30.0% |
| ! | GATGTTAAACCTTTTGCATT+TGG | - | chr2.1:39862630-39862649 | MS.gene97266:CDS | 30.0% |
| ! | TATGCTGGTTAAAGAACTAT+TGG | - | chr2.1:39863044-39863063 | MS.gene97266:CDS | 30.0% |
| ! | TTCCTTACTGATTAATATGC+TGG | - | chr2.1:39863029-39863048 | MS.gene97266:CDS | 30.0% |
| ! | TTCTTGGAAAGTGTAAATGA+GGG | - | chr2.1:39861616-39861635 | MS.gene97266:CDS | 30.0% |
| ! | TTTCTTGGAAAGTGTAAATG+AGG | - | chr2.1:39861615-39861634 | MS.gene97266:CDS | 30.0% |
| !! | ACTCTATGTTTTTGTACTTC+TGG | + | chr2.1:39863297-39863316 | None:intergenic | 30.0% |
| !! | ATCCATGCTTTTTAATAGCT+AGG | - | chr2.1:39861709-39861728 | MS.gene97266:CDS | 30.0% |
| !! | CTCTATGTTTTTGTACTTCT+GGG | + | chr2.1:39863296-39863315 | None:intergenic | 30.0% |
| !! | GAGGATAGTTCAATTGATTT+TGG | - | chr2.1:39860595-39860614 | MS.gene97266:CDS | 30.0% |
| !!! | TTCAACATTTTTGGCAATCT+TGG | - | chr2.1:39863141-39863160 | MS.gene97266:intron | 30.0% |
| AAAGATGAGAGGACCTTAAA+CGG | + | chr2.1:39862285-39862304 | None:intergenic | 35.0% | |
| AAGGTTTAACATCGAATGTC+AGG | + | chr2.1:39862623-39862642 | None:intergenic | 35.0% | |
| AATCTAGACGCGTAGTTAAT+AGG | + | chr2.1:39862222-39862241 | None:intergenic | 35.0% | |
| AGTTGGAATTGTCTATGTTC+AGG | - | chr2.1:39862096-39862115 | MS.gene97266:intron | 35.0% | |
| ATATATGCCTTCAACCTCAA+AGG | + | chr2.1:39861165-39861184 | None:intergenic | 35.0% | |
| ATTGTTCTGCTTGAAATGTC+TGG | - | chr2.1:39862596-39862615 | MS.gene97266:CDS | 35.0% | |
| CAAATTACTGACCTGAAACT+TGG | - | chr2.1:39861935-39861954 | MS.gene97266:intron | 35.0% | |
| CAAGATCTTCAGAAAAGAGA+AGG | - | chr2.1:39860883-39860902 | MS.gene97266:intron | 35.0% | |
| CTATTACACTTTCCTACAAC+TGG | - | chr2.1:39862876-39862895 | MS.gene97266:CDS | 35.0% | |
| CTTAGTCGAATATCAGTTCT+GGG | - | chr2.1:39863118-39863137 | MS.gene97266:intron | 35.0% | |
| GACCTAGCTATTAAAAAGCA+TGG | + | chr2.1:39861714-39861733 | None:intergenic | 35.0% | |
| TAGGGTTTCTTGTATTGTCA+AGG | - | chr2.1:39860662-39860681 | MS.gene97266:CDS | 35.0% | |
| TATATGCCTTCAACCTCAAA+GGG | + | chr2.1:39861164-39861183 | None:intergenic | 35.0% | |
| TCTTAGTCGAATATCAGTTC+TGG | - | chr2.1:39863117-39863136 | MS.gene97266:intron | 35.0% | |
| TGTGCACTAGGAAAACATAT+CGG | - | chr2.1:39861671-39861690 | MS.gene97266:CDS | 35.0% | |
| TTTCTTGTATTGTCAAGGCT+TGG | - | chr2.1:39860667-39860686 | MS.gene97266:CDS | 35.0% | |
| ! | AAGGTATCACACCGAATTAT+AGG | - | chr2.1:39861124-39861143 | MS.gene97266:intron | 35.0% |
| ! | ACAATCTGTGCATTGATGAA+AGG | + | chr2.1:39860829-39860848 | None:intergenic | 35.0% |
| ! | AGAGGCTTTTCTTGGAAATT+TGG | - | chr2.1:39860720-39860739 | MS.gene97266:intron | 35.0% |
| ! | GGAAGTTTCTCAAGCTTTTA+GGG | - | chr2.1:39860644-39860663 | MS.gene97266:CDS | 35.0% |
| ! | GTTGCAATACATTCTGGAAA+TGG | - | chr2.1:39862721-39862740 | MS.gene97266:CDS | 35.0% |
| ! | TTCTGAAGATCTTGCAACTT+GGG | + | chr2.1:39860877-39860896 | None:intergenic | 35.0% |
| ! | TTTCTGAAGATCTTGCAACT+TGG | + | chr2.1:39860878-39860897 | None:intergenic | 35.0% |
| !! | AAAGGTTGGTAAAAGATGAG+AGG | + | chr2.1:39862296-39862315 | None:intergenic | 35.0% |
| !! | CAGACAGATTTGATTTTACC+TGG | + | chr2.1:39860389-39860408 | None:intergenic | 35.0% |
| !! | GATTTTGGTGACTTCTTCAA+AGG | - | chr2.1:39860610-39860629 | MS.gene97266:CDS | 35.0% |
| !! | TGCTTTCAAGTTCTCTTTCT+TGG | - | chr2.1:39861600-39861619 | MS.gene97266:CDS | 35.0% |
| !!! | AGTTCTGGGTTCAACATTTT+TGG | - | chr2.1:39863132-39863151 | MS.gene97266:intron | 35.0% |
| !!! | GAATATGGTTTTGGTATGAG+AGG | + | chr2.1:39860286-39860305 | None:intergenic | 35.0% |
| !!! | TGTAGATGTTCTATTTTGGC+AGG | - | chr2.1:39862412-39862431 | MS.gene97266:intron | 35.0% |
| AAAAGCTTGAGAAACTTCCC+TGG | + | chr2.1:39860643-39860662 | None:intergenic | 40.0% | |
| AATTGTTCGCTCACATCATC+TGG | + | chr2.1:39862904-39862923 | None:intergenic | 40.0% | |
| AGCGAACAATTGAAACGTCA+AGG | - | chr2.1:39862913-39862932 | MS.gene97266:CDS | 40.0% | |
| AGGCATATATGCAGGTTCAT+AGG | - | chr2.1:39861175-39861194 | MS.gene97266:intron | 40.0% | |
| ATCTGCTTACCTACCGTTTA+AGG | - | chr2.1:39862269-39862288 | MS.gene97266:intron | 40.0% | |
| CAGAAAGAAGGACACAATGA+TGG | + | chr2.1:39862071-39862090 | None:intergenic | 40.0% | |
| CAGTGCTAGTATGTTTAGGA+AGG | - | chr2.1:39861345-39861364 | MS.gene97266:intron | 40.0% | |
| CATTGTGTCCTTCTTTCTGT+TGG | - | chr2.1:39862072-39862091 | MS.gene97266:intron | 40.0% | |
| CCAGAATGTATTGCAACAGA+AGG | + | chr2.1:39862718-39862737 | None:intergenic | 40.0% | |
| CCCAATGTACGTTGTAATCA+CGG | + | chr2.1:39861912-39861931 | None:intergenic | 40.0% | |
| CCGTGATTACAACGTACATT+GGG | - | chr2.1:39861909-39861928 | MS.gene97266:intron | 40.0% | |
| CCTTCTGTTGCAATACATTC+TGG | - | chr2.1:39862715-39862734 | MS.gene97266:CDS | 40.0% | |
| CGTGATTACAACGTACATTG+GGG | - | chr2.1:39861910-39861929 | MS.gene97266:intron | 40.0% | |
| CTTCCTAAACATACTAGCAC+TGG | + | chr2.1:39861347-39861366 | None:intergenic | 40.0% | |
| GTTGAGTGGTAGATATTCTC+CGG | + | chr2.1:39860354-39860373 | None:intergenic | 40.0% | |
| TACACTCGATATGCTTCTGT+TGG | - | chr2.1:39860934-39860953 | MS.gene97266:intron | 40.0% | |
| TATATGCAGGTTCATAGGTG+TGG | - | chr2.1:39861180-39861199 | MS.gene97266:intron | 40.0% | |
| TCACCAGTGCTAGTATGTTT+AGG | - | chr2.1:39861341-39861360 | MS.gene97266:intron | 40.0% | |
| TCCAACTACCAACAGAAAGA+AGG | + | chr2.1:39862083-39862102 | None:intergenic | 40.0% | |
| TCCGTGATTACAACGTACAT+TGG | - | chr2.1:39861908-39861927 | MS.gene97266:intron | 40.0% | |
| TCTAGATTCACCAGCAAAAG+CGG | - | chr2.1:39862234-39862253 | MS.gene97266:intron | 40.0% | |
| TCTTCAGAAAAGAGAAGGTG+AGG | - | chr2.1:39860888-39860907 | MS.gene97266:intron | 40.0% | |
| TGTGATGTAGTGTTAAGTGC+TGG | + | chr2.1:39861736-39861755 | None:intergenic | 40.0% | |
| TTGCAACACTGATGATTCTC+AGG | - | chr2.1:39862179-39862198 | MS.gene97266:intron | 40.0% | |
| TTTGGCAGGTCAATAGTTCT+GGG | - | chr2.1:39862426-39862445 | MS.gene97266:intron | 40.0% | |
| ! | AGAAGGGGAAGCTTCTTTTA+CGG | + | chr2.1:39860233-39860252 | None:intergenic | 40.0% |
| ! | CATAGAGCACCAAATGCAAA+AGG | + | chr2.1:39862642-39862661 | None:intergenic | 40.0% |
| ! | CTTGGTGTGTATATACCTCT+AGG | - | chr2.1:39860685-39860704 | MS.gene97266:CDS | 40.0% |
| ! | GGGAAGTTTCTCAAGCTTTT+AGG | - | chr2.1:39860643-39860662 | MS.gene97266:CDS | 40.0% |
| ! | GTTAACAGAGAGGCTTTTCT+TGG | - | chr2.1:39860712-39860731 | MS.gene97266:intron | 40.0% |
| ! | TCTTACTTGCCAGCTTCTTT+TGG | - | chr2.1:39861995-39862014 | MS.gene97266:intron | 40.0% |
| ! | TTTTACCTGGTAGAGAGATG+AGG | + | chr2.1:39860376-39860395 | None:intergenic | 40.0% |
| ! | TTTTGGCAGGTCAATAGTTC+TGG | - | chr2.1:39862425-39862444 | MS.gene97266:intron | 40.0% |
| !! | AATTAGCCCTTTGAGGTTGA+AGG | - | chr2.1:39861155-39861174 | MS.gene97266:intron | 40.0% |
| !! | GTATGTGGTTGGTTTATCTC+CGG | - | chr2.1:39862558-39862577 | MS.gene97266:intron | 40.0% |
| !! | TATGTGGTTGGTTTATCTCC+GGG | - | chr2.1:39862559-39862578 | MS.gene97266:intron | 40.0% |
| !! | TCCTTCTTTCTGTTGGTAGT+TGG | - | chr2.1:39862079-39862098 | MS.gene97266:intron | 40.0% |
| AATGTAGCTGTACTTCTGCC+TGG | + | chr2.1:39862961-39862980 | None:intergenic | 45.0% | |
| AATGTCCGACCAAAAGAAGC+TGG | + | chr2.1:39862007-39862026 | None:intergenic | 45.0% | |
| ACCAATACCACCACCAGAAA+AGG | + | chr2.1:39860776-39860795 | None:intergenic | 45.0% | |
| ACTGACCTGAAACTTGGGAA+TGG | - | chr2.1:39861941-39861960 | MS.gene97266:intron | 45.0% | |
| AGACTTGGCATATGCTCTCT+TGG | - | chr2.1:39860796-39860815 | MS.gene97266:intron | 45.0% | |
| AGGTTCCATTCCCAAGTTTC+AGG | + | chr2.1:39861949-39861968 | None:intergenic | 45.0% | |
| AGTAAGGAAATCAAGGAGCG+TGG | + | chr2.1:39863018-39863037 | None:intergenic | 45.0% | |
| AGTCATTTACATAGGGACGC+AGG | + | chr2.1:39861841-39861860 | None:intergenic | 45.0% | |
| ATGAGAGGACCTTAAACGGT+AGG | + | chr2.1:39862281-39862300 | None:intergenic | 45.0% | |
| CATCATCTGGATCCAGTTGT+AGG | + | chr2.1:39862891-39862910 | None:intergenic | 45.0% | |
| GGTAACAAGTCCGACATAGT+TGG | + | chr2.1:39862050-39862069 | None:intergenic | 45.0% | |
| GGTACTTTAGCACGTTTCAC+TGG | - | chr2.1:39862491-39862510 | MS.gene97266:intron | 45.0% | |
| GGTGTGTATATACCTCTAGG+TGG | - | chr2.1:39860688-39860707 | MS.gene97266:CDS | 45.0% | |
| GTCGTTCAATTAGCCCTTTG+AGG | - | chr2.1:39861148-39861167 | MS.gene97266:intron | 45.0% | |
| TAAACCAACCACATACCTCC+TGG | + | chr2.1:39862554-39862573 | None:intergenic | 45.0% | |
| TAGATGTTCCAGCAAATCCC+CGG | + | chr2.1:39863213-39863232 | None:intergenic | 45.0% | |
| TCAATTCCACTTGTCAGACC+AGG | - | chr2.1:39862940-39862959 | MS.gene97266:CDS | 45.0% | |
| TCTAGGTGGAGTTAACAGAG+AGG | - | chr2.1:39860702-39860721 | MS.gene97266:CDS | 45.0% | |
| TCTCTGTTAACTCCACCTAG+AGG | + | chr2.1:39860703-39860722 | None:intergenic | 45.0% | |
| TGAGAGGACGATTATTCAGC+CGG | + | chr2.1:39860270-39860289 | None:intergenic | 45.0% | |
| TGTTGGATTCGCCATTGTAC+AGG | - | chr2.1:39860951-39860970 | MS.gene97266:intron | 45.0% | |
| ! | ACATCATCGTTAGCTCTTCC+TGG | - | chr2.1:39862470-39862489 | MS.gene97266:intron | 45.0% |
| ! | ACTCTAGACTCCTTTTCTGG+TGG | - | chr2.1:39860763-39860782 | MS.gene97266:intron | 45.0% |
| ! | ACTTGCCAGCTTCTTTTGGT+CGG | - | chr2.1:39861999-39862018 | MS.gene97266:intron | 45.0% |
| ! | AGCACTCTAGACTCCTTTTC+TGG | - | chr2.1:39860760-39860779 | MS.gene97266:intron | 45.0% |
| ! | CTTTGAATCCAGGAGGTATG+TGG | - | chr2.1:39862543-39862562 | MS.gene97266:intron | 45.0% |
| ! | GAGGTTGAAGGCATATATGC+AGG | - | chr2.1:39861167-39861186 | MS.gene97266:intron | 45.0% |
| ! | GTAAGGAAATCAAGGAGCGT+GGG | + | chr2.1:39863017-39863036 | None:intergenic | 45.0% |
| ! | GTGAAACGTGCTAAAGTACC+AGG | + | chr2.1:39862491-39862510 | None:intergenic | 45.0% |
| ! | GTTTTCCTAGTGCACAACAG+TGG | + | chr2.1:39861667-39861686 | None:intergenic | 45.0% |
| ! | TAAGGAAATCAAGGAGCGTG+GGG | + | chr2.1:39863016-39863035 | None:intergenic | 45.0% |
| ! | TTGGCAGGTCAATAGTTCTG+GGG | - | chr2.1:39862427-39862446 | MS.gene97266:intron | 45.0% |
| !! | ACATACTAGCACTGGTGAGA+CGG | + | chr2.1:39861339-39861358 | None:intergenic | 45.0% |
| !! | TTTTTGGCAATCTTGGCTGC+TGG | - | chr2.1:39863148-39863167 | MS.gene97266:intron | 45.0% |
| !!! | TCCTTTTCTGGTGGTGGTAT+TGG | - | chr2.1:39860772-39860791 | MS.gene97266:intron | 45.0% |
| AGATTCACCAGCAAAAGCGG+TGG | - | chr2.1:39862237-39862256 | MS.gene97266:intron | 50.0% | |
| AGCTCAGAAAAACCTCGAGG+AGG | - | chr2.1:39860547-39860566 | MS.gene97266:intron | 50.0% | |
| AGGGACGCAGGAAAAGAACT+TGG | + | chr2.1:39861829-39861848 | None:intergenic | 50.0% | |
| CAGAAAAGAGAAGGTGAGGC+TGG | - | chr2.1:39860892-39860911 | MS.gene97266:intron | 50.0% | |
| CTCAACCACTGTTGTGCACT+AGG | - | chr2.1:39861659-39861678 | MS.gene97266:CDS | 50.0% | |
| CTCAACCTCATCTCTCTACC+AGG | - | chr2.1:39860368-39860387 | MS.gene97266:CDS | 50.0% | |
| CTGCACACTTGACTGCATTC+CGG | - | chr2.1:39863191-39863210 | MS.gene97266:CDS | 50.0% | |
| GAGAGCTCAGAAAAACCTCG+AGG | - | chr2.1:39860544-39860563 | MS.gene97266:intron | 50.0% | |
| GCAGTCTGCTCAACAATTGC+AGG | + | chr2.1:39863175-39863194 | None:intergenic | 50.0% | |
| GGTAGAGAGATGAGGTTGAG+TGG | + | chr2.1:39860368-39860387 | None:intergenic | 50.0% | |
| GTAGCGAATTTCGACCCGTT+AGG | - | chr2.1:39860475-39860494 | MS.gene97266:intron | 50.0% | |
| TATTCTCCGGACAGAGAGAG+TGG | + | chr2.1:39860341-39860360 | None:intergenic | 50.0% | |
| TCAGAAAAACCTCGAGGAGG+AGG | - | chr2.1:39860550-39860569 | MS.gene97266:intron | 50.0% | |
| TCTTCAAAGGTCCTCTGCCA+GGG | - | chr2.1:39860623-39860642 | MS.gene97266:CDS | 50.0% | |
| TGCACACTTGACTGCATTCC+GGG | - | chr2.1:39863192-39863211 | MS.gene97266:CDS | 50.0% | |
| TTCTTCAAAGGTCCTCTGCC+AGG | - | chr2.1:39860622-39860641 | MS.gene97266:CDS | 50.0% | |
| TTGAGAAACTTCCCTGGCAG+AGG | + | chr2.1:39860637-39860656 | None:intergenic | 50.0% | |
| ! | GAATCCAGGAGGTATGTGGT+TGG | - | chr2.1:39862547-39862566 | MS.gene97266:intron | 50.0% |
| !! | CTAGACTCCTTTTCTGGTGG+TGG | - | chr2.1:39860766-39860785 | MS.gene97266:intron | 50.0% |
| !! | GCAGTAGCTTTGAATCCAGG+AGG | - | chr2.1:39862536-39862555 | MS.gene97266:intron | 50.0% |
| !! | GCTGCAGTAGCTTTGAATCC+AGG | - | chr2.1:39862533-39862552 | MS.gene97266:intron | 50.0% |
| !! | GGTGGTGGTATTGGTAGACT+TGG | - | chr2.1:39860781-39860800 | MS.gene97266:intron | 50.0% |
| !! | TTCAAGTCCACCGCTTTTGC+TGG | + | chr2.1:39862247-39862266 | None:intergenic | 50.0% |
| AAGAAGCTTCCCCTTCTCCC+AGG | - | chr2.1:39860236-39860255 | MS.gene97266:CDS | 55.0% | |
| ACTGCATTCCGGGGATTTGC+TGG | - | chr2.1:39863202-39863221 | MS.gene97266:intron | 55.0% | |
| AGGAGCAGCAGCTGCAATAG+AGG | - | chr2.1:39860576-39860595 | MS.gene97266:CDS | 55.0% | |
| CTTCTGCCTGGTCTGACAAG+TGG | + | chr2.1:39862949-39862968 | None:intergenic | 55.0% | |
| GAAAAACCTCGAGGAGGAGG+AGG | - | chr2.1:39860553-39860572 | MS.gene97266:intron | 55.0% | |
| GCACACTTGACTGCATTCCG+GGG | - | chr2.1:39863193-39863212 | MS.gene97266:CDS | 55.0% | |
| AAACCTCGAGGAGGAGGAGG+AGG | - | chr2.1:39860556-39860575 | MS.gene97266:intron | 60.0% | |
| AAGCTTCCCCTTCTCCCAGG+TGG | - | chr2.1:39860239-39860258 | MS.gene97266:CDS | 60.0% | |
| ATTCAGCCGGACACACCACC+TGG | + | chr2.1:39860257-39860276 | None:intergenic | 60.0% | |
| CTTCTCCCAGGTGGTGTGTC+CGG | - | chr2.1:39860248-39860267 | MS.gene97266:CDS | 60.0% | |
| GACACACCACCTGGGAGAAG+GGG | + | chr2.1:39860248-39860267 | None:intergenic | 60.0% | |
| GCAGAGCCACTCTCTCTGTC+CGG | - | chr2.1:39860332-39860351 | MS.gene97266:CDS | 60.0% | |
| GGACACACCACCTGGGAGAA+GGG | + | chr2.1:39860249-39860268 | None:intergenic | 60.0% | |
| TTCAGCCGGACACACCACCT+GGG | + | chr2.1:39860256-39860275 | None:intergenic | 60.0% | |
| CGGACACACCACCTGGGAGA+AGG | + | chr2.1:39860250-39860269 | None:intergenic | 65.0% | |
| GGAGCGTGGGGCTAGAGAGA+AGG | + | chr2.1:39863004-39863023 | None:intergenic | 65.0% | |
| GCTCCTCCTCCTCCTCCTCG+AGG | + | chr2.1:39860562-39860581 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 39860217 | 39863339 | 39860217 | ID=MS.gene97266 |
| chr2.1 | mRNA | 39860217 | 39863339 | 39860217 | ID=MS.gene97266.t1;Parent=MS.gene97266 |
| chr2.1 | exon | 39863299 | 39863339 | 39863299 | ID=MS.gene97266.t1.exon1;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39863299 | 39863339 | 39863299 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39863167 | 39863220 | 39863167 | ID=MS.gene97266.t1.exon2;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39863167 | 39863220 | 39863167 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39862584 | 39863088 | 39862584 | ID=MS.gene97266.t1.exon3;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39862584 | 39863088 | 39862584 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39861439 | 39861738 | 39861439 | ID=MS.gene97266.t1.exon4;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39861439 | 39861738 | 39861439 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39861266 | 39861355 | 39861266 | ID=MS.gene97266.t1.exon5;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39861266 | 39861355 | 39861266 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39860999 | 39861122 | 39860999 | ID=MS.gene97266.t1.exon6;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39860999 | 39861122 | 39860999 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39860566 | 39860729 | 39860566 | ID=MS.gene97266.t1.exon7;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39860566 | 39860729 | 39860566 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| chr2.1 | exon | 39860217 | 39860441 | 39860217 | ID=MS.gene97266.t1.exon8;Parent=MS.gene97266.t1 |
| chr2.1 | CDS | 39860217 | 39860441 | 39860217 | ID=cds.MS.gene97266.t1;Parent=MS.gene97266.t1 |
| Gene Sequence |
| Protein sequence |
