Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072665.t1 | GAU11330.1 | 91.9 | 135 | 11 | 0 | 1 | 135 | 130 | 264 | 3.10E-62 | 247.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072665.t1 | Q94K41 | 65.9 | 126 | 43 | 0 | 1 | 126 | 130 | 255 | 3.4e-41 | 169.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072665.t1 | G7KTR4 | 93.4 | 136 | 8 | 1 | 1 | 135 | 131 | 266 | 1.6e-60 | 241.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072665 | 0.819893 | 9.14E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene072665 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene072665 | 0.837838 | 4.10E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene072665 | 0.8147 | 1.35E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene072665 | 0.820886 | 5.41E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene072665 | 0.827069 | 1.92E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene072665 | 0.815813 | 7.63E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene072665 | 0.814786 | 1.29E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene072665 | 0.858483 | 7.99E-63 | -1.69E-46 |
| MS.gene049491 | MS.gene072665 | 0.800112 | 1.68E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene072665 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene072665 | 0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene072665 | 0.837843 | 4.09E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene072665 | 0.83047 | 2.89E-55 | -1.69E-46 |
| MS.gene049760 | MS.gene072665 | 0.817674 | 2.92E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene072665 | 0.84862 | 5.46E-60 | -1.69E-46 |
| MS.gene050076 | MS.gene072665 | 0.8951 | 1.32E-75 | -1.69E-46 |
| MS.gene050163 | MS.gene072665 | 0.808434 | 3.10E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene072665 | 0.81508 | 1.11E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene072665 | 0.807209 | 5.65E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene072665 | 0.967642 | 1.47E-127 | -1.69E-46 |
| MS.gene050520 | MS.gene072665 | 0.801168 | 1.02E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene072665 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene072665 | 0.814951 | 1.19E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene072665 | 0.823416 | 1.40E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene072665 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene050686 | MS.gene072665 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene072665 | 0.819525 | 1.11E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene072665 | 0.856411 | 3.28E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene072665 | 0.858589 | 7.43E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene072665 | 0.847017 | 1.51E-59 | -1.69E-46 |
| MS.gene050783 | MS.gene072665 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene072665 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene072665 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene072665 | 0.841329 | 5.08E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene072665 | 0.845319 | 4.37E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene072665 | 0.84896 | 4.39E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene072665 | 0.826628 | 2.44E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene072665 | 0.866441 | 2.84E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene072665 | 0.846989 | 1.54E-59 | -1.69E-46 |
| MS.gene051694 | MS.gene072665 | 0.82082 | 5.60E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene072665 | 0.821113 | 4.80E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene072665 | 0.831988 | 1.22E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene072665 | 0.844572 | 6.96E-59 | -1.69E-46 |
| MS.gene052078 | MS.gene072665 | 0.819145 | 1.35E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene072665 | 0.837785 | 4.23E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene072665 | 0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene072665 | 0.841691 | 4.08E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene072665 | 0.831796 | 1.36E-55 | -1.69E-46 |
| MS.gene052322 | MS.gene072665 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene072665 | 0.833758 | 4.44E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene072665 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene072665 | 0.870876 | 1.05E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene072665 | 0.820853 | 5.51E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene072665 | 0.859909 | 2.98E-63 | -1.69E-46 |
| MS.gene052484 | MS.gene072665 | 0.873991 | 9.57E-68 | -1.69E-46 |
| MS.gene052485 | MS.gene072665 | 0.836672 | 8.16E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene072665 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene052508 | MS.gene072665 | 0.802285 | 6.03E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene072665 | 0.842178 | 3.03E-58 | -1.69E-46 |
| MS.gene052870 | MS.gene072665 | 0.802014 | 6.86E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene072665 | 0.800049 | 1.73E-48 | -1.69E-46 |
| MS.gene052982 | MS.gene072665 | 0.821793 | 3.34E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene072665 | 0.809895 | 1.51E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene072665 | 0.881015 | 3.41E-70 | -1.69E-46 |
| MS.gene053104 | MS.gene072665 | 0.893952 | 3.89E-75 | -1.69E-46 |
| MS.gene053107 | MS.gene072665 | 0.833684 | 4.63E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene072665 | 0.867857 | 1.00E-65 | -1.69E-46 |
| MS.gene053209 | MS.gene072665 | 0.873216 | 1.75E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene072665 | 0.852912 | 3.38E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene072665 | 0.844926 | 5.59E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene072665 | 0.886558 | 3.08E-72 | -1.69E-46 |
| MS.gene053574 | MS.gene072665 | 0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene072665 | 0.803221 | 3.87E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene072665 | 0.863803 | 1.92E-64 | -1.69E-46 |
| MS.gene053915 | MS.gene072665 | 0.802422 | 5.65E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene072665 | 0.828755 | 7.54E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene072665 | 0.842967 | 1.87E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene072665 | 0.803233 | 3.84E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene072665 | 0.836823 | 7.47E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene072665 | 0.86064 | 1.79E-63 | -1.69E-46 |
| MS.gene054802 | MS.gene072665 | 0.848705 | 5.17E-60 | -1.69E-46 |
| MS.gene054803 | MS.gene072665 | 0.845174 | 4.79E-59 | -1.69E-46 |
| MS.gene054804 | MS.gene072665 | 0.850753 | 1.39E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene072665 | 0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene072665 | 0.813892 | 2.03E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene072665 | 0.849067 | 4.10E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene072665 | 0.825428 | 4.71E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene072665 | 0.86295 | 3.52E-64 | -1.69E-46 |
| MS.gene055212 | MS.gene072665 | 0.838997 | 2.06E-57 | -1.69E-46 |
| MS.gene055254 | MS.gene072665 | 0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene072665 | 0.865013 | 8.03E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene072665 | 0.860221 | 2.40E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene072665 | 0.818119 | 2.32E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene072665 | 0.806801 | 6.89E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene072665 | 0.844914 | 5.63E-59 | -1.69E-46 |
| MS.gene055412 | MS.gene072665 | 0.837093 | 6.37E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene072665 | 0.828044 | 1.12E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene072665 | 0.843363 | 1.47E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene072665 | 0.810179 | 1.31E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene072665 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene072665 | 0.816392 | 5.66E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene072665 | 0.805424 | 1.34E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene072665 | 0.831361 | 1.74E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene072665 | 0.866996 | 1.89E-65 | -1.69E-46 |
| MS.gene055896 | MS.gene072665 | 0.805884 | 1.08E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene072665 | 0.868719 | 5.30E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene072665 | 0.821178 | 4.63E-53 | -1.69E-46 |
| MS.gene05602 | MS.gene072665 | 0.800669 | 1.29E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene072665 | 0.803785 | 2.95E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene072665 | 0.803865 | 2.84E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene072665 | 0.856638 | 2.81E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene072665 | 0.843206 | 1.62E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene072665 | 0.82499 | 5.98E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene072665 | 0.802592 | 5.22E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene072665 | 0.811205 | 7.86E-51 | -1.69E-46 |
| MS.gene056452 | MS.gene072665 | 0.812131 | 4.95E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene072665 | 0.808266 | 3.37E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene072665 | 0.829728 | 4.38E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene072665 | 0.833681 | 4.64E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene072665 | 0.829831 | 4.13E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene072665 | 0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene072665 | 0.820036 | 8.48E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene072665 | 0.882218 | 1.25E-70 | -1.69E-46 |
| MS.gene057076 | MS.gene072665 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene072665 | 0.825657 | 4.16E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene072665 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene072665 | 0.884123 | 2.51E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene072665 | 0.871428 | 6.89E-67 | -1.69E-46 |
| MS.gene057196 | MS.gene072665 | 0.809278 | 2.05E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene072665 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene072665 | 0.82645 | 2.70E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene072665 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene05735 | MS.gene072665 | 0.824704 | 6.99E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene072665 | 0.849279 | 3.58E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene072665 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene072665 | 0.818303 | 2.10E-52 | -1.69E-46 |
| MS.gene057845 | MS.gene072665 | 0.809985 | 1.44E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene072665 | 0.83524 | 1.88E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene072665 | 0.807239 | 5.57E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene072665 | 0.840361 | 9.11E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene072665 | 0.837684 | 4.49E-57 | -1.69E-46 |
| MS.gene058082 | MS.gene072665 | 0.806275 | 8.90E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene072665 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene072665 | 0.829006 | 6.55E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene072665 | 0.884739 | 1.48E-71 | -1.69E-46 |
| MS.gene058323 | MS.gene072665 | 0.839414 | 1.61E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene072665 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene072665 | 0.835254 | 1.87E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene072665 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene072665 | 0.853689 | 2.02E-61 | -1.69E-46 |
| MS.gene058723 | MS.gene072665 | 0.810773 | 9.76E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene072665 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene072665 | 0.801746 | 7.78E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene072665 | 0.824258 | 8.90E-54 | -1.69E-46 |
| MS.gene05913 | MS.gene072665 | 0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene072665 | 0.842435 | 2.59E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene072665 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene059368 | MS.gene072665 | 0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene072665 | 0.859861 | 3.09E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene072665 | 0.833051 | 6.66E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene072665 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene072665 | 0.802076 | 6.66E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene072665 | 0.874172 | 8.31E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene072665 | 0.870994 | 9.58E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene072665 | 0.873165 | 1.82E-67 | -1.69E-46 |
| MS.gene059711 | MS.gene072665 | 0.832779 | 7.78E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene072665 | 0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene072665 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene072665 | 0.835015 | 2.15E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene072665 | 0.877777 | 4.79E-69 | -1.69E-46 |
| MS.gene060193 | MS.gene072665 | 0.83677 | 7.70E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene072665 | 0.81559 | 8.55E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene072665 | 0.821047 | 4.97E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene072665 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene072665 | 0.891685 | 3.17E-74 | -1.69E-46 |
| MS.gene060818 | MS.gene072665 | 0.854296 | 1.35E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene072665 | 0.818235 | 2.18E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene072665 | 0.855204 | 7.38E-62 | -1.69E-46 |
| MS.gene06092 | MS.gene072665 | 0.856667 | 2.76E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene072665 | 0.867425 | 1.38E-65 | -1.69E-46 |
| MS.gene061049 | MS.gene072665 | 0.80877 | 2.63E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene072665 | -0.843088 | 1.74E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene072665 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene072665 | 0.873824 | 1.09E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072665.t1 | MTR_7g110130 | 93.382 | 136 | 8 | 1 | 1 | 135 | 131 | 266 | 2.10e-85 | 250 |
| MS.gene072665.t1 | MTR_2g090165 | 82.963 | 135 | 23 | 0 | 1 | 135 | 130 | 264 | 3.91e-76 | 227 |
| MS.gene072665.t1 | MTR_7g110160 | 85.039 | 127 | 19 | 0 | 1 | 127 | 112 | 238 | 8.83e-74 | 220 |
| MS.gene072665.t1 | MTR_7g110140 | 68.382 | 136 | 40 | 1 | 1 | 133 | 130 | 265 | 4.70e-60 | 186 |
| MS.gene072665.t1 | MTR_6g035395 | 63.158 | 133 | 49 | 0 | 1 | 133 | 116 | 248 | 4.97e-54 | 170 |
| MS.gene072665.t1 | MTR_4g052320 | 50.794 | 126 | 58 | 2 | 7 | 130 | 138 | 261 | 5.09e-35 | 122 |
| MS.gene072665.t1 | MTR_6g023590 | 45.968 | 124 | 67 | 0 | 1 | 124 | 139 | 262 | 2.51e-34 | 120 |
| MS.gene072665.t1 | MTR_4g052340 | 52.459 | 122 | 55 | 1 | 7 | 128 | 144 | 262 | 4.72e-34 | 119 |
| MS.gene072665.t1 | MTR_4g052350 | 49.612 | 129 | 62 | 1 | 7 | 135 | 144 | 269 | 7.89e-34 | 119 |
| MS.gene072665.t1 | MTR_7g105570 | 50.000 | 108 | 54 | 0 | 20 | 127 | 113 | 220 | 2.32e-33 | 117 |
| MS.gene072665.t1 | MTR_6g023950 | 46.774 | 124 | 66 | 0 | 1 | 124 | 139 | 262 | 9.13e-33 | 116 |
| MS.gene072665.t1 | MTR_7g105460 | 49.074 | 108 | 55 | 0 | 20 | 127 | 156 | 263 | 1.04e-32 | 116 |
| MS.gene072665.t1 | MTR_7g105580 | 46.667 | 135 | 70 | 2 | 1 | 134 | 115 | 248 | 1.12e-32 | 115 |
| MS.gene072665.t1 | MTR_4g052300 | 49.206 | 126 | 59 | 2 | 7 | 130 | 138 | 260 | 6.28e-32 | 114 |
| MS.gene072665.t1 | MTR_6g023990 | 44.355 | 124 | 69 | 0 | 1 | 124 | 140 | 263 | 3.44e-31 | 112 |
| MS.gene072665.t1 | MTR_7g071680 | 45.000 | 140 | 60 | 1 | 8 | 130 | 161 | 300 | 8.99e-31 | 112 |
| MS.gene072665.t1 | MTR_6g023610 | 44.715 | 123 | 68 | 0 | 1 | 123 | 139 | 261 | 1.73e-30 | 110 |
| MS.gene072665.t1 | MTR_6g023910 | 43.902 | 123 | 69 | 0 | 1 | 123 | 139 | 261 | 2.07e-29 | 107 |
| MS.gene072665.t1 | MTR_6g023600 | 44.355 | 124 | 69 | 0 | 1 | 124 | 133 | 256 | 2.53e-29 | 107 |
| MS.gene072665.t1 | MTR_6g023600 | 44.355 | 124 | 69 | 0 | 1 | 124 | 139 | 262 | 2.60e-29 | 107 |
| MS.gene072665.t1 | MTR_7g107670 | 43.443 | 122 | 64 | 1 | 8 | 124 | 163 | 284 | 5.22e-28 | 104 |
| MS.gene072665.t1 | MTR_3g020670 | 43.802 | 121 | 62 | 1 | 20 | 134 | 160 | 280 | 6.25e-26 | 99.0 |
| MS.gene072665.t1 | MTR_4g078630 | 40.141 | 142 | 78 | 2 | 1 | 135 | 141 | 282 | 1.19e-25 | 98.2 |
| MS.gene072665.t1 | MTR_7g083870 | 41.985 | 131 | 70 | 3 | 8 | 132 | 166 | 296 | 8.08e-24 | 93.6 |
| MS.gene072665.t1 | MTR_7g105590 | 51.613 | 62 | 29 | 1 | 1 | 62 | 133 | 193 | 8.67e-13 | 62.8 |
| MS.gene072665.t1 | MTR_3g113870 | 48.276 | 58 | 30 | 0 | 8 | 65 | 151 | 208 | 2.94e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072665.t1 | AT2G47140 | 65.873 | 126 | 43 | 0 | 1 | 126 | 130 | 255 | 1.77e-54 | 171 |
| MS.gene072665.t1 | AT3G29250 | 58.268 | 127 | 53 | 0 | 1 | 127 | 130 | 256 | 5.54e-45 | 147 |
| MS.gene072665.t1 | AT3G29250 | 58.268 | 127 | 53 | 0 | 1 | 127 | 168 | 294 | 7.81e-45 | 148 |
| MS.gene072665.t1 | AT3G29250 | 58.268 | 127 | 53 | 0 | 1 | 127 | 166 | 292 | 8.93e-45 | 148 |
| MS.gene072665.t1 | AT2G47130 | 58.268 | 127 | 52 | 1 | 1 | 127 | 130 | 255 | 2.00e-44 | 146 |
| MS.gene072665.t1 | AT2G47120 | 55.814 | 129 | 51 | 3 | 1 | 127 | 131 | 255 | 1.27e-43 | 144 |
| MS.gene072665.t1 | AT2G47120 | 55.814 | 129 | 51 | 3 | 1 | 127 | 130 | 254 | 1.35e-43 | 144 |
| MS.gene072665.t1 | AT3G29260 | 58.594 | 128 | 50 | 2 | 1 | 127 | 130 | 255 | 1.55e-41 | 139 |
| MS.gene072665.t1 | AT3G51680 | 49.640 | 139 | 61 | 1 | 1 | 130 | 163 | 301 | 5.74e-34 | 120 |
| MS.gene072665.t1 | AT1G52340 | 47.143 | 140 | 67 | 2 | 1 | 134 | 147 | 285 | 6.27e-29 | 107 |
| MS.gene072665.t1 | AT3G26760 | 37.500 | 128 | 73 | 1 | 8 | 128 | 167 | 294 | 3.36e-24 | 94.7 |
| MS.gene072665.t1 | AT4G03140 | 39.098 | 133 | 75 | 2 | 1 | 128 | 202 | 333 | 5.77e-24 | 94.7 |
| MS.gene072665.t1 | AT3G26770 | 42.636 | 129 | 61 | 3 | 8 | 127 | 172 | 296 | 1.60e-22 | 90.5 |
| MS.gene072665.t1 | AT3G42960 | 45.926 | 135 | 64 | 4 | 8 | 133 | 136 | 270 | 9.29e-22 | 87.8 |
| MS.gene072665.t1 | AT2G47150 | 35.433 | 127 | 49 | 3 | 1 | 127 | 105 | 198 | 6.90e-15 | 68.6 |
Find 28 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAAGGAATTACATTAA+AGG | 0.203968 | 7.3:-5014786 | MS.gene072665:CDS |
| AGTGTAGCTGCTTCTGTTGC+TGG | 0.306606 | 7.3:-5015001 | MS.gene072665:CDS |
| ACATCCAAACATGGTCTCTT+AGG | 0.311178 | 7.3:-5014956 | MS.gene072665:CDS |
| TTATATTAGTGGACACAATT+TGG | 0.312298 | 7.3:-5014714 | MS.gene072665:CDS |
| TACACTGGCAGTACAAATTA+TGG | 0.348031 | 7.3:+5015018 | None:intergenic |
| GCTGCTTCTGTTGCTGGAAC+TGG | 0.384524 | 7.3:-5014995 | MS.gene072665:CDS |
| GAAGAATCAGCTTATATTAG+TGG | 0.431042 | 7.3:-5014725 | MS.gene072665:CDS |
| TGCGGTGAGCTTGGAGCTTA+CGG | 0.431271 | 7.3:-5014917 | MS.gene072665:CDS |
| CGTTCAACGTGCGGTGAGCT+TGG | 0.449623 | 7.3:-5014926 | MS.gene072665:CDS |
| AAGTCCTAAGAGACCATGTT+TGG | 0.467093 | 7.3:+5014952 | None:intergenic |
| AATGATTCTGCTAATTTGAA+AGG | 0.470724 | 7.3:-5014800 | MS.gene072665:CDS |
| AGCTGCTCTCTTTCTTGCAT+CGG | 0.473087 | 7.3:-5014747 | MS.gene072665:CDS |
| CACAATTTGGTGGTCGATGG+AGG | 0.510608 | 7.3:-5014701 | MS.gene072665:CDS |
| GTGAGTGAAGTTGAAGCTAT+GGG | 0.510902 | 7.3:-5014824 | MS.gene072665:CDS |
| AGAGGCGTGGCAACAGCATA+CGG | 0.535077 | 7.3:+5014872 | None:intergenic |
| AGCAACAGAAGCAGCTACAC+TGG | 0.548413 | 7.3:+5015003 | None:intergenic |
| GCTTCTGTTGCTGGAACTGG+TGG | 0.550638 | 7.3:-5014992 | MS.gene072665:CDS |
| GGTGAGTGAAGTTGAAGCTA+TGG | 0.560707 | 7.3:-5014825 | MS.gene072665:CDS |
| TATTAGTGGACACAATTTGG+TGG | 0.561555 | 7.3:-5014711 | MS.gene072665:CDS |
| GGACACAATTTGGTGGTCGA+TGG | 0.563116 | 7.3:-5014704 | MS.gene072665:CDS |
| TGCATGTAGAGCACTGAACA+TGG | 0.590712 | 7.3:-5014849 | MS.gene072665:CDS |
| TTCAGTGCTCTACATGCAAG+AGG | 0.603585 | 7.3:+5014854 | None:intergenic |
| GATTATGTCACATCCAAACA+TGG | 0.609752 | 7.3:-5014965 | MS.gene072665:CDS |
| TGCTCTACATGCAAGAGGCG+TGG | 0.617171 | 7.3:+5014859 | None:intergenic |
| GGACTTGTACGTTCAACGTG+CGG | 0.641327 | 7.3:-5014935 | MS.gene072665:CDS |
| CAGTACAAATTATGGATCCG+CGG | 0.653793 | 7.3:+5015026 | None:intergenic |
| TGAGTGAAGTTGAAGCTATG+GGG | 0.654036 | 7.3:-5014823 | MS.gene072665:CDS |
| ATGTAGAGCACTGAACATGG+AGG | 0.811309 | 7.3:-5014846 | MS.gene072665:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGAAAGGAATTACATTAA+AGG | - | chr7.3:5014915-5014934 | MS.gene072665:CDS | 20.0% |
| ! | AATGATTCTGCTAATTTGAA+AGG | - | chr7.3:5014901-5014920 | MS.gene072665:CDS | 25.0% |
| !! | TTATATTAGTGGACACAATT+TGG | - | chr7.3:5014987-5015006 | MS.gene072665:CDS | 25.0% |
| GAAGAATCAGCTTATATTAG+TGG | - | chr7.3:5014976-5014995 | MS.gene072665:CDS | 30.0% | |
| GATTATGTCACATCCAAACA+TGG | - | chr7.3:5014736-5014755 | MS.gene072665:CDS | 35.0% | |
| TACACTGGCAGTACAAATTA+TGG | + | chr7.3:5014686-5014705 | None:intergenic | 35.0% | |
| ! | TATTAGTGGACACAATTTGG+TGG | - | chr7.3:5014990-5015009 | MS.gene072665:CDS | 35.0% |
| AAGTCCTAAGAGACCATGTT+TGG | + | chr7.3:5014752-5014771 | None:intergenic | 40.0% | |
| ACATCCAAACATGGTCTCTT+AGG | - | chr7.3:5014745-5014764 | MS.gene072665:CDS | 40.0% | |
| CAGTACAAATTATGGATCCG+CGG | + | chr7.3:5014678-5014697 | None:intergenic | 40.0% | |
| GTGAGTGAAGTTGAAGCTAT+GGG | - | chr7.3:5014877-5014896 | MS.gene072665:CDS | 40.0% | |
| TGAGTGAAGTTGAAGCTATG+GGG | - | chr7.3:5014878-5014897 | MS.gene072665:CDS | 40.0% | |
| AGCTGCTCTCTTTCTTGCAT+CGG | - | chr7.3:5014954-5014973 | MS.gene072665:CDS | 45.0% | |
| GGTGAGTGAAGTTGAAGCTA+TGG | - | chr7.3:5014876-5014895 | MS.gene072665:CDS | 45.0% | |
| TTCAGTGCTCTACATGCAAG+AGG | + | chr7.3:5014850-5014869 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGAGAAAAATCCG+CGG | - | chr7.3:5014658-5014677 | MS.gene072665:CDS | 45.0% |
| !! | ATGTAGAGCACTGAACATGG+AGG | - | chr7.3:5014855-5014874 | MS.gene072665:CDS | 45.0% |
| !! | TGCATGTAGAGCACTGAACA+TGG | - | chr7.3:5014852-5014871 | MS.gene072665:CDS | 45.0% |
| AGCAACAGAAGCAGCTACAC+TGG | + | chr7.3:5014701-5014720 | None:intergenic | 50.0% | |
| AGTGTAGCTGCTTCTGTTGC+TGG | - | chr7.3:5014700-5014719 | MS.gene072665:CDS | 50.0% | |
| GGACTTGTACGTTCAACGTG+CGG | - | chr7.3:5014766-5014785 | MS.gene072665:CDS | 50.0% | |
| ! | CACAATTTGGTGGTCGATGG+AGG | - | chr7.3:5015000-5015019 | MS.gene072665:CDS | 50.0% |
| ! | GGACACAATTTGGTGGTCGA+TGG | - | chr7.3:5014997-5015016 | MS.gene072665:CDS | 50.0% |
| GCTGCTTCTGTTGCTGGAAC+TGG | - | chr7.3:5014706-5014725 | MS.gene072665:CDS | 55.0% | |
| GCTTCTGTTGCTGGAACTGG+TGG | - | chr7.3:5014709-5014728 | MS.gene072665:CDS | 55.0% | |
| TGCGGTGAGCTTGGAGCTTA+CGG | - | chr7.3:5014784-5014803 | MS.gene072665:CDS | 55.0% | |
| TGCTCTACATGCAAGAGGCG+TGG | + | chr7.3:5014845-5014864 | None:intergenic | 55.0% | |
| ! | AGAGGCGTGGCAACAGCATA+CGG | + | chr7.3:5014832-5014851 | None:intergenic | 55.0% |
| CGTTCAACGTGCGGTGAGCT+TGG | - | chr7.3:5014775-5014794 | MS.gene072665:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5014658 | 5015065 | 5014658 | ID=MS.gene072665 |
| chr7.3 | mRNA | 5014658 | 5015065 | 5014658 | ID=MS.gene072665.t1;Parent=MS.gene072665 |
| chr7.3 | exon | 5014658 | 5015065 | 5014658 | ID=MS.gene072665.t1.exon1;Parent=MS.gene072665.t1 |
| chr7.3 | CDS | 5014658 | 5015065 | 5014658 | ID=cds.MS.gene072665.t1;Parent=MS.gene072665.t1 |
| Gene Sequence |
| Protein sequence |
