Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070108.t1 | XP_003612637.2 | 94.7 | 321 | 16 | 1 | 1 | 321 | 1 | 320 | 4.40E-171 | 610.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070108.t1 | G7K855 | 94.7 | 321 | 16 | 1 | 1 | 321 | 1 | 320 | 3.2e-171 | 610.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene070108 | 0.849414 | 3.28E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene070108 | 0.829978 | 3.80E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene070108 | 0.828048 | 1.12E-54 | -1.69E-46 |
| MS.gene049488 | MS.gene070108 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene070108 | 0.854259 | 1.39E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene070108 | 0.828263 | 9.91E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene070108 | 0.820279 | 7.46E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene070108 | 0.862627 | 4.43E-64 | -1.69E-46 |
| MS.gene050122 | MS.gene070108 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene070108 | 0.824879 | 6.35E-54 | -1.69E-46 |
| MS.gene050397 | MS.gene070108 | 0.803336 | 3.66E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene070108 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene070108 | 0.80551 | 1.29E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene070108 | 0.850417 | 1.72E-60 | -1.69E-46 |
| MS.gene050625 | MS.gene070108 | 0.835925 | 1.26E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene070108 | 0.904669 | 9.64E-80 | -1.69E-46 |
| MS.gene050747 | MS.gene070108 | 0.852378 | 4.80E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene070108 | 0.830076 | 3.60E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene070108 | 0.807117 | 5.91E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene070108 | 0.838867 | 2.23E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene070108 | 0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene070108 | 0.895697 | 7.49E-76 | -1.69E-46 |
| MS.gene051113 | MS.gene070108 | -0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene070108 | 0.801043 | 1.08E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene070108 | 0.884425 | 1.94E-71 | -1.69E-46 |
| MS.gene051525 | MS.gene070108 | 0.888381 | 6.21E-73 | -1.69E-46 |
| MS.gene051582 | MS.gene070108 | 0.85223 | 5.29E-61 | -1.69E-46 |
| MS.gene051588 | MS.gene070108 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene070108 | 0.814757 | 1.31E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene070108 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene070108 | -0.850433 | 1.70E-60 | -1.69E-46 |
| MS.gene052128 | MS.gene070108 | -0.82282 | 1.93E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene070108 | 0.837368 | 5.42E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene070108 | 0.86397 | 1.70E-64 | -1.69E-46 |
| MS.gene052310 | MS.gene070108 | 0.83605 | 1.17E-56 | -1.69E-46 |
| MS.gene052322 | MS.gene070108 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene070108 | 0.819229 | 1.30E-52 | -1.69E-46 |
| MS.gene052346 | MS.gene070108 | 0.802327 | 5.91E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene070108 | 0.841733 | 3.97E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene070108 | 0.896635 | 3.05E-76 | -1.69E-46 |
| MS.gene052481 | MS.gene070108 | 0.844809 | 6.01E-59 | -1.69E-46 |
| MS.gene052484 | MS.gene070108 | 0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene070108 | 0.853263 | 2.68E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene070108 | 0.855768 | 5.05E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene070108 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene070108 | 0.860761 | 1.65E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene070108 | 0.843735 | 1.17E-58 | -1.69E-46 |
| MS.gene052767 | MS.gene070108 | 0.824804 | 6.62E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene070108 | 0.88575 | 6.21E-72 | -1.69E-46 |
| MS.gene053103 | MS.gene070108 | 0.831238 | 1.87E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene070108 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene070108 | 0.825412 | 4.76E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene070108 | 0.820874 | 5.45E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene070108 | 0.809765 | 1.61E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene070108 | 0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene070108 | 0.808943 | 2.42E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene070108 | 0.818921 | 1.52E-52 | -1.69E-46 |
| MS.gene053579 | MS.gene070108 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene070108 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene070108 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene070108 | 0.806695 | 7.26E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene070108 | 0.801966 | 7.01E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene070108 | 0.846057 | 2.76E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene070108 | 0.815756 | 7.85E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene070108 | 0.805861 | 1.09E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene070108 | 0.813635 | 2.32E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene070108 | 0.802984 | 4.33E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene070108 | 0.801007 | 1.10E-48 | -1.69E-46 |
| MS.gene054102 | MS.gene070108 | 0.800818 | 1.21E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene070108 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene05413 | MS.gene070108 | 0.810428 | 1.16E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene070108 | 0.831681 | 1.45E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene070108 | 0.817398 | 3.37E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene070108 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene070108 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene070108 | -0.802145 | 6.45E-49 | -1.69E-46 |
| MS.gene054917 | MS.gene070108 | 0.852058 | 5.92E-61 | -1.69E-46 |
| MS.gene054918 | MS.gene070108 | 0.816894 | 4.37E-52 | -1.69E-46 |
| MS.gene054920 | MS.gene070108 | 0.856048 | 4.18E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene070108 | 0.862815 | 3.88E-64 | -1.69E-46 |
| MS.gene05504 | MS.gene070108 | 0.805243 | 1.47E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene070108 | 0.859892 | 3.02E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene070108 | 0.86586 | 4.34E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene070108 | 0.809371 | 1.96E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene070108 | 0.812566 | 3.98E-51 | -1.69E-46 |
| MS.gene055369 | MS.gene070108 | 0.857362 | 1.72E-62 | -1.69E-46 |
| MS.gene055412 | MS.gene070108 | 0.828339 | 9.50E-55 | -1.69E-46 |
| MS.gene055486 | MS.gene070108 | 0.815161 | 1.07E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene070108 | 0.817337 | 3.48E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene070108 | 0.802854 | 4.60E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene070108 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene070108 | 0.830049 | 3.66E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene070108 | 0.833192 | 6.14E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene070108 | 0.835915 | 1.27E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene070108 | 0.846557 | 2.01E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene070108 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene05594 | MS.gene070108 | 0.829247 | 5.73E-55 | -1.69E-46 |
| MS.gene05602 | MS.gene070108 | 0.814429 | 1.55E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene070108 | 0.807598 | 4.67E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene070108 | 0.81239 | 4.34E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene070108 | 0.851312 | 9.63E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene070108 | 0.861363 | 1.08E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene070108 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene056497 | MS.gene070108 | 0.81452 | 1.48E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene070108 | 0.84492 | 5.61E-59 | -1.69E-46 |
| MS.gene056514 | MS.gene070108 | 0.867032 | 1.85E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene070108 | 0.819655 | 1.04E-52 | -1.69E-46 |
| MS.gene056899 | MS.gene070108 | -0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene070108 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene070108 | 0.818001 | 2.46E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene070108 | 0.80919 | 2.14E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene070108 | 0.823593 | 1.27E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene070108 | 0.820569 | 6.40E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene070108 | 0.85332 | 2.58E-61 | -1.69E-46 |
| MS.gene057146 | MS.gene070108 | 0.843376 | 1.46E-58 | -1.69E-46 |
| MS.gene057289 | MS.gene070108 | 0.80139 | 9.21E-49 | -1.69E-46 |
| MS.gene057310 | MS.gene070108 | 0.808082 | 3.69E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene070108 | 0.838931 | 2.14E-57 | -1.69E-46 |
| MS.gene057476 | MS.gene070108 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene070108 | 0.87406 | 9.07E-68 | -1.69E-46 |
| MS.gene057823 | MS.gene070108 | 0.88821 | 7.22E-73 | -1.69E-46 |
| MS.gene057825 | MS.gene070108 | 0.845252 | 4.56E-59 | -1.69E-46 |
| MS.gene057826 | MS.gene070108 | 0.800569 | 1.36E-48 | -1.69E-46 |
| MS.gene057845 | MS.gene070108 | 0.806911 | 6.54E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene070108 | 0.821267 | 4.42E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene070108 | 0.852043 | 5.98E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene070108 | 0.850426 | 1.71E-60 | -1.69E-46 |
| MS.gene058120 | MS.gene070108 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene070108 | 0.819282 | 1.26E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene070108 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene070108 | 0.846338 | 2.31E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene070108 | 0.800208 | 1.60E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene070108 | 0.852765 | 3.72E-61 | -1.69E-46 |
| MS.gene058444 | MS.gene070108 | 0.872369 | 3.35E-67 | -1.69E-46 |
| MS.gene058660 | MS.gene070108 | 0.837345 | 5.49E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene070108 | 0.888372 | 6.26E-73 | -1.69E-46 |
| MS.gene05886 | MS.gene070108 | 0.846209 | 2.51E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene070108 | 0.819158 | 1.35E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene070108 | 0.831462 | 1.65E-55 | -1.69E-46 |
| MS.gene058995 | MS.gene070108 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene070108 | 0.827612 | 1.42E-54 | -1.69E-46 |
| MS.gene059082 | MS.gene070108 | 0.819827 | 9.47E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene070108 | 0.839667 | 1.38E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene070108 | 0.806393 | 8.41E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene070108 | 0.879128 | 1.60E-69 | -1.69E-46 |
| MS.gene059455 | MS.gene070108 | 0.81439 | 1.58E-51 | -1.69E-46 |
| MS.gene059462 | MS.gene070108 | 0.813292 | 2.76E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene070108 | 0.830157 | 3.44E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene070108 | 0.819398 | 1.19E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene070108 | 0.827793 | 1.29E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene070108 | 0.879098 | 1.64E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene070108 | 0.868004 | 9.01E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene070108 | 0.873814 | 1.10E-67 | -1.69E-46 |
| MS.gene059711 | MS.gene070108 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene070108 | 0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene070108 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene070108 | 0.859046 | 5.42E-63 | -1.69E-46 |
| MS.gene060485 | MS.gene070108 | 0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene070108 | 0.806525 | 7.89E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene070108 | 0.847048 | 1.48E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene070108 | 0.844072 | 9.48E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene070108 | 0.823813 | 1.13E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene070108 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene070108 | 0.83964 | 1.40E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene070108 | 0.857354 | 1.73E-62 | -1.69E-46 |
| MS.gene061200 | MS.gene070108 | 0.81042 | 1.16E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070108.t1 | MTR_5g027220 | 94.704 | 321 | 16 | 1 | 1 | 321 | 1 | 320 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070108.t1 | AT5G48790 | 64.486 | 321 | 98 | 5 | 2 | 318 | 5 | 313 | 1.22e-147 | 418 |
| MS.gene070108.t1 | AT5G48790 | 61.066 | 244 | 80 | 4 | 2 | 241 | 5 | 237 | 1.73e-96 | 286 |
| MS.gene070108.t1 | AT5G48790 | 61.066 | 244 | 80 | 4 | 2 | 241 | 5 | 237 | 1.73e-96 | 286 |
Find 63 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTGTTTGTTATCTTTCA+TGG | 0.235080 | 5.4:+17969895 | None:intergenic |
| CATTCTTCTCAGGACCTTCC+AGG | 0.258428 | 5.4:+17968060 | None:intergenic |
| CTACCGTTGACATTGAAATA+TGG | 0.280220 | 5.4:+17968783 | None:intergenic |
| ATGGAAGAGGGTGTTATTAC+AGG | 0.293545 | 5.4:+17971510 | None:intergenic |
| AATGGTGGGTTTATCAGAAT+TGG | 0.317994 | 5.4:-17971358 | MS.gene070108:CDS |
| TGTTCTTCTGTTTCTGCTAC+TGG | 0.333964 | 5.4:-17971286 | MS.gene070108:CDS |
| TTCGTAAGTCCAGCAAGCTT+TGG | 0.347190 | 5.4:+17968390 | None:intergenic |
| AAGTCGACTTCATTAGCTTC+TGG | 0.359116 | 5.4:+17968951 | None:intergenic |
| GGCTAGAGTTGCAGTGGAAT+TGG | 0.367089 | 5.4:-17969918 | MS.gene070108:CDS |
| GAAATCGACCGTATCAGATC+TGG | 0.388599 | 5.4:-17968605 | MS.gene070108:CDS |
| GATTCTCAAGGTTCTCAAGT+TGG | 0.398965 | 5.4:-17971398 | MS.gene070108:intron |
| CTCAGGACCTTCCAGGGTCC+TGG | 0.401002 | 5.4:+17968067 | None:intergenic |
| TACTACTCCCCATTCTTCTC+AGG | 0.409708 | 5.4:+17968050 | None:intergenic |
| TCGTAAGTCCAGCAAGCTTT+GGG | 0.409771 | 5.4:+17968391 | None:intergenic |
| TGGAAGGTCCTGAGAAGAAT+GGG | 0.428971 | 5.4:-17968058 | MS.gene070108:CDS |
| TCTGTTTCTGCTACTGGTGA+TGG | 0.431285 | 5.4:-17971280 | MS.gene070108:CDS |
| GAAAGATAACAAACAGCTAA+TGG | 0.432708 | 5.4:-17969891 | MS.gene070108:intron |
| TGATTTCTAGATACCATTGA+AGG | 0.454769 | 5.4:+17971322 | None:intergenic |
| GAAGTCCTTTCTACCTTCCA+TGG | 0.456657 | 5.4:-17968370 | MS.gene070108:CDS |
| ACGAATCAATTGCATGCTTC+CGG | 0.458484 | 5.4:+17969601 | None:intergenic |
| GAGATTGAGTTTCCCACAGC+TGG | 0.466925 | 5.4:-17969758 | MS.gene070108:CDS |
| TACCGTTGACATTGAAATAT+GGG | 0.469846 | 5.4:+17968784 | None:intergenic |
| AGGGATTACTGCTCCTTCAA+TGG | 0.469926 | 5.4:-17971335 | MS.gene070108:CDS |
| TCAGAGTAATCAAAAGGAAA+AGG | 0.483879 | 5.4:+17971232 | None:intergenic |
| ATATGTCTGTCTACATCAGC+AGG | 0.485033 | 5.4:-17968026 | MS.gene070108:CDS |
| CTGGAAGGTCCTGAGAAGAA+TGG | 0.492934 | 5.4:-17968059 | MS.gene070108:CDS |
| AATTTCAAGGGTCGCGATAG+AGG | 0.494818 | 5.4:-17968327 | MS.gene070108:CDS |
| ATTCTTCTCAGGACCTTCCA+GGG | 0.499708 | 5.4:+17968061 | None:intergenic |
| TATTACATTCATAATTTCAA+GGG | 0.505529 | 5.4:-17968339 | MS.gene070108:CDS |
| AGTTTCCATGGAAGGTAGAA+AGG | 0.512868 | 5.4:+17968365 | None:intergenic |
| GTATTACATTCATAATTTCA+AGG | 0.518169 | 5.4:-17968340 | MS.gene070108:CDS |
| AGAAGCTCAGAGTAATCAAA+AGG | 0.518809 | 5.4:+17971226 | None:intergenic |
| AATGTAATACACAGTTTCCA+TGG | 0.519031 | 5.4:+17968353 | None:intergenic |
| GGTGGGTTTATCAGAATTGG+AGG | 0.528447 | 5.4:-17971355 | MS.gene070108:CDS |
| GCTGGACTCGAATCCGTACC+AGG | 0.545971 | 5.4:-17969740 | MS.gene070108:intron |
| AGTCGACTTTGCAAGACAAT+CGG | 0.550107 | 5.4:-17968937 | MS.gene070108:CDS |
| AGGGCAACTTCTTTGAGAGA+TGG | 0.550489 | 5.4:+17967995 | None:intergenic |
| GCAAGACAATCGGCCTTCAG+TGG | 0.552335 | 5.4:-17968927 | MS.gene070108:CDS |
| CGTTGAAGATGAGATGGAAG+AGG | 0.552773 | 5.4:+17971497 | None:intergenic |
| TAATACCGTTGAAGATGAGA+TGG | 0.561055 | 5.4:+17971491 | None:intergenic |
| ATCACAGGTGATGGTGAAGG+TGG | 0.566648 | 5.4:-17969635 | MS.gene070108:intron |
| GAAATATATAGGACCTGGTA+CGG | 0.572631 | 5.4:+17969727 | None:intergenic |
| AAATCGACCGTATCAGATCT+GGG | 0.581224 | 5.4:-17968604 | MS.gene070108:CDS |
| GAAGGTGGAATAGAGATGAC+CGG | 0.583492 | 5.4:-17969620 | MS.gene070108:CDS |
| TACGGATTCGAGTCCAGCTG+TGG | 0.585974 | 5.4:+17969745 | None:intergenic |
| CTCTTCCATCTCATCTTCAA+CGG | 0.588631 | 5.4:-17971496 | MS.gene070108:intron |
| GGATACACCCAGATCTGATA+CGG | 0.591283 | 5.4:+17968597 | None:intergenic |
| CTTAAAAGAAGCTCCACTGA+AGG | 0.601180 | 5.4:+17968914 | None:intergenic |
| TACCCATATTTCAATGTCAA+CGG | 0.602169 | 5.4:-17968786 | MS.gene070108:intron |
| GTGGGTTTATCAGAATTGGA+GGG | 0.602526 | 5.4:-17971354 | MS.gene070108:CDS |
| AAGCTGTCGTGAACACTGAA+CGG | 0.604893 | 5.4:-17968649 | MS.gene070108:CDS |
| TAATACACAGTTTCCATGGA+AGG | 0.605202 | 5.4:+17968357 | None:intergenic |
| GCAAGCTTTGGGTAAAAGAA+CGG | 0.608445 | 5.4:+17968402 | None:intergenic |
| GTTGAAGATGAGATGGAAGA+GGG | 0.612533 | 5.4:+17971498 | None:intergenic |
| GTAGGTGCTATCCAGGACCC+TGG | 0.616080 | 5.4:-17968078 | MS.gene070108:intron |
| GTTGACATTGAAATATGGGT+AGG | 0.616675 | 5.4:+17968788 | None:intergenic |
| GTGCTATCCAGGACCCTGGA+AGG | 0.616742 | 5.4:-17968074 | MS.gene070108:CDS |
| CCGACAGGCTAGAGTTGCAG+TGG | 0.618300 | 5.4:-17969924 | MS.gene070108:intron |
| GTCGGACAGAGTGAAGGCAG+AGG | 0.640476 | 5.4:-17968829 | MS.gene070108:CDS |
| ACGGATTCGAGTCCAGCTGT+GGG | 0.655887 | 5.4:+17969746 | None:intergenic |
| AGCTTTGGGTAAAAGAACGG+TGG | 0.671176 | 5.4:+17968405 | None:intergenic |
| TATATCACAGGTGATGGTGA+AGG | 0.681027 | 5.4:-17969638 | MS.gene070108:intron |
| GGAAGGTCCTGAGAAGAATG+GGG | 0.693212 | 5.4:-17968057 | MS.gene070108:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAAACTGAAAA+TGG | - | chr5.4:17968567-17968586 | MS.gene070108:intron | 10.0% |
| !! | ATATCTAATAATATTTGTAT+TGG | - | chr5.4:17969636-17969655 | MS.gene070108:intron | 10.0% |
| !!! | ATTTTTTTTTTTAACCATTT+TGG | - | chr5.4:17969080-17969099 | MS.gene070108:intron | 10.0% |
| !! | ATTTAAGTAAAATAAAAGGA+AGG | + | chr5.4:17970076-17970095 | None:intergenic | 15.0% |
| !! | GTTATCTTTAATATAAACAA+TGG | - | chr5.4:17970753-17970772 | MS.gene070108:intron | 15.0% |
| !! | GTTTATATTAAAGATAACAA+AGG | + | chr5.4:17970751-17970770 | None:intergenic | 15.0% |
| !! | TATAACTTTATTGAACATTT+AGG | - | chr5.4:17968434-17968453 | MS.gene070108:intron | 15.0% |
| !! | TATTACATTCATAATTTCAA+GGG | - | chr5.4:17971159-17971178 | MS.gene070108:intron | 15.0% |
| !! | TCCAATTTAAGTAAAATAAA+AGG | + | chr5.4:17970080-17970099 | None:intergenic | 15.0% |
| !!! | ATTTTTATGATAATTAAGCA+CGG | + | chr5.4:17968500-17968519 | None:intergenic | 15.0% |
| !!! | TCCTTTTATTTTACTTAAAT+TGG | - | chr5.4:17970076-17970095 | MS.gene070108:intron | 15.0% |
| !! | AATATACCCTAATACTTTAA+AGG | - | chr5.4:17969333-17969352 | MS.gene070108:intron | 20.0% |
| !! | ACTTATTTAAGCTTATATAG+TGG | + | chr5.4:17969306-17969325 | None:intergenic | 20.0% |
| !! | ATATACCCTAATACTTTAAA+GGG | - | chr5.4:17969334-17969353 | MS.gene070108:intron | 20.0% |
| !! | ATGTGAATGTTGTAAATATT+TGG | + | chr5.4:17970252-17970271 | None:intergenic | 20.0% |
| !! | CTTGATAAAAAGTTTAAAAG+AGG | + | chr5.4:17968678-17968697 | None:intergenic | 20.0% |
| !! | GTATTACATTCATAATTTCA+AGG | - | chr5.4:17971158-17971177 | MS.gene070108:intron | 20.0% |
| !! | TCTTTAATATAAACAATGGA+CGG | - | chr5.4:17970757-17970776 | MS.gene070108:intron | 20.0% |
| !!! | ATGTTGAGTTTTAATATTGA+TGG | - | chr5.4:17968351-17968370 | MS.gene070108:CDS | 20.0% |
| !!! | ATTTTTGAAGGAAAATAGTA+AGG | + | chr5.4:17968045-17968064 | None:intergenic | 20.0% |
| !!! | GAAACTTTTTCTCTTAAAAA+TGG | - | chr5.4:17968122-17968141 | MS.gene070108:intron | 20.0% |
| !!! | TATATCCCTTTAAAGTATTA+GGG | + | chr5.4:17969342-17969361 | None:intergenic | 20.0% |
| !!! | TTAAAGTATTAGGGTATATT+TGG | + | chr5.4:17969333-17969352 | None:intergenic | 20.0% |
| !!! | TTATATCCCTTTAAAGTATT+AGG | + | chr5.4:17969343-17969362 | None:intergenic | 20.0% |
| !!! | TTTTTGAAGGAAAATAGTAA+GGG | + | chr5.4:17968044-17968063 | None:intergenic | 20.0% |
| ! | AAAAACTGAAAATGGTTTCT+TGG | - | chr5.4:17968575-17968594 | MS.gene070108:intron | 25.0% |
| ! | AGAAAATAGTAATCCTTGAA+TGG | - | chr5.4:17971059-17971078 | MS.gene070108:intron | 25.0% |
| ! | CCAAAATCTTGAAAAAATGA+AGG | + | chr5.4:17970628-17970647 | None:intergenic | 25.0% |
| ! | GATAAAAAGTTTAAAAGAGG+AGG | + | chr5.4:17968675-17968694 | None:intergenic | 25.0% |
| ! | TAAACCAAAATTCACTCATA+AGG | - | chr5.4:17968640-17968659 | MS.gene070108:CDS | 25.0% |
| ! | TAAAGATAACAAAGGAAGTT+CGG | + | chr5.4:17970743-17970762 | None:intergenic | 25.0% |
| ! | TAATGTGTTATGTAGTAAGA+AGG | - | chr5.4:17969443-17969462 | MS.gene070108:intron | 25.0% |
| ! | TGTTGAGAAAGTAAAAATGT+CGG | - | chr5.4:17970651-17970670 | MS.gene070108:intron | 25.0% |
| ! | TTAAGATCGTTGTTCATTAT+AGG | + | chr5.4:17969716-17969735 | None:intergenic | 25.0% |
| ! | TTATCCAAATAAGACCAAAA+TGG | + | chr5.4:17969097-17969116 | None:intergenic | 25.0% |
| ! | TTCTTGCATAAGTATTTGTT+TGG | - | chr5.4:17970961-17970980 | MS.gene070108:intron | 25.0% |
| !! | AAGGATTACTATTTTCTGAA+AGG | + | chr5.4:17971056-17971075 | None:intergenic | 25.0% |
| !! | CTTTTTCTCTTAAAAATGGT+GGG | - | chr5.4:17968126-17968145 | MS.gene070108:intron | 25.0% |
| !! | GTGTTTGTCAAATTTTATGT+AGG | - | chr5.4:17971402-17971421 | MS.gene070108:intron | 25.0% |
| !! | TCTGTCAAGATTTTAAATTG+CGG | - | chr5.4:17969372-17969391 | MS.gene070108:intron | 25.0% |
| !! | TGCTAATAAAGCACTAAAAT+TGG | - | chr5.4:17969544-17969563 | MS.gene070108:intron | 25.0% |
| !! | TTTTTACAAGTTGTGAAGAT+AGG | + | chr5.4:17970040-17970059 | None:intergenic | 25.0% |
| !!! | ACTTTTTCTCTTAAAAATGG+TGG | - | chr5.4:17968125-17968144 | MS.gene070108:intron | 25.0% |
| !!! | CCTTCATTTTTTCAAGATTT+TGG | - | chr5.4:17970625-17970644 | MS.gene070108:intron | 25.0% |
| !!! | CTCAAAATTTTGTCTAGTTT+TGG | - | chr5.4:17970433-17970452 | MS.gene070108:intron | 25.0% |
| !!! | CTTAAATTGGAAGTTGATTT+TGG | - | chr5.4:17970089-17970108 | MS.gene070108:intron | 25.0% |
| !!! | GGAAAAAACTGATTTTTACA+AGG | + | chr5.4:17970529-17970548 | None:intergenic | 25.0% |
| !!! | TATGAGTGAATTTTGGTTTA+TGG | + | chr5.4:17968640-17968659 | None:intergenic | 25.0% |
| !!! | TTAACCATTTTGGTCTTATT+TGG | - | chr5.4:17969090-17969109 | MS.gene070108:intron | 25.0% |
| AATGAACAACGATCTTAAAC+AGG | - | chr5.4:17969718-17969737 | MS.gene070108:intron | 30.0% | |
| AATGATTATATCACAGGTGA+TGG | - | chr5.4:17969854-17969873 | MS.gene070108:intron | 30.0% | |
| AATGTAATACACAGTTTCCA+TGG | + | chr5.4:17971148-17971167 | None:intergenic | 30.0% | |
| AGAGTCATATCTAATCAATG+TGG | - | chr5.4:17968696-17968715 | MS.gene070108:intron | 30.0% | |
| AGGTATCAAAGATGAGATAT+TGG | - | chr5.4:17970999-17971018 | MS.gene070108:intron | 30.0% | |
| ATCACCTGTGATATAATCAT+TGG | + | chr5.4:17969855-17969874 | None:intergenic | 30.0% | |
| ATGCTTGTCATGTGATAATT+TGG | - | chr5.4:17971260-17971279 | MS.gene070108:CDS | 30.0% | |
| CACGAAAATTGTAGTCAAAT+AGG | - | chr5.4:17969418-17969437 | MS.gene070108:intron | 30.0% | |
| CCTTTCTTGATGAAATGAAA+AGG | - | chr5.4:17970014-17970033 | MS.gene070108:intron | 30.0% | |
| GAAAGATAACAAACAGCTAA+TGG | - | chr5.4:17969607-17969626 | MS.gene070108:CDS | 30.0% | |
| GAGTCATATCTAATCAATGT+GGG | - | chr5.4:17968697-17968716 | MS.gene070108:intron | 30.0% | |
| GATATGTATGCAGTGAAATT+TGG | - | chr5.4:17971304-17971323 | MS.gene070108:CDS | 30.0% | |
| GGAAATGTTAATATCTTGCT+TGG | - | chr5.4:17971282-17971301 | MS.gene070108:CDS | 30.0% | |
| GGTATCAAAGATGAGATATT+GGG | - | chr5.4:17971000-17971019 | MS.gene070108:intron | 30.0% | |
| GTATTAGGGTATGTTTGAAT+TGG | + | chr5.4:17968880-17968899 | None:intergenic | 30.0% | |
| TACCCATATTTCAATGTCAA+CGG | - | chr5.4:17970712-17970731 | MS.gene070108:intron | 30.0% | |
| TACCGTTGACATTGAAATAT+GGG | + | chr5.4:17970717-17970736 | None:intergenic | 30.0% | |
| TCACCTGTGATATAATCATT+GGG | + | chr5.4:17969854-17969873 | None:intergenic | 30.0% | |
| TCAGAGTAATCAAAAGGAAA+AGG | + | chr5.4:17968269-17968288 | None:intergenic | 30.0% | |
| TGAGGAGAAAATCTTGTATA+AGG | - | chr5.4:17969690-17969709 | MS.gene070108:intron | 30.0% | |
| TGCTTGTCATGTGATAATTT+GGG | - | chr5.4:17971261-17971280 | MS.gene070108:CDS | 30.0% | |
| TTCATCAAGAAAGGAATACT+GGG | + | chr5.4:17970008-17970027 | None:intergenic | 30.0% | |
| TTGCATAAGTATTTGTTTGG+TGG | - | chr5.4:17970964-17970983 | MS.gene070108:intron | 30.0% | |
| TTTCATCAAGAAAGGAATAC+TGG | + | chr5.4:17970009-17970028 | None:intergenic | 30.0% | |
| ! | ATGTAATAGAGCACTACAAT+GGG | - | chr5.4:17969008-17969027 | MS.gene070108:intron | 30.0% |
| ! | CCTTTTCATTTCATCAAGAA+AGG | + | chr5.4:17970017-17970036 | None:intergenic | 30.0% |
| ! | CTGATTGAAGACATTTTTGA+AGG | + | chr5.4:17968057-17968076 | None:intergenic | 30.0% |
| ! | TAGCTGCATAATTTTGCAAA+AGG | + | chr5.4:17970925-17970944 | None:intergenic | 30.0% |
| ! | TATTGATGGACAAATGTAGT+TGG | - | chr5.4:17968365-17968384 | MS.gene070108:CDS | 30.0% |
| ! | TGATTTCTAGATACCATTGA+AGG | + | chr5.4:17968179-17968198 | None:intergenic | 30.0% |
| ! | TTGAACATTTAGGTTCTCTT+TGG | - | chr5.4:17968444-17968463 | MS.gene070108:intron | 30.0% |
| !! | AATTTTTCGGAAGAATCTCA+AGG | + | chr5.4:17971526-17971545 | None:intergenic | 30.0% |
| !! | ATTTTTCGGAAGAATCTCAA+GGG | + | chr5.4:17971525-17971544 | None:intergenic | 30.0% |
| !! | TAGCTGTTTGTTATCTTTCA+TGG | + | chr5.4:17969606-17969625 | None:intergenic | 30.0% |
| !! | TATTGCTTTTCTGATTCTCA+AGG | - | chr5.4:17968088-17968107 | MS.gene070108:intron | 30.0% |
| !!! | CGAACTGTTTTTTAAAACCT+TGG | - | chr5.4:17969495-17969514 | MS.gene070108:intron | 30.0% |
| AAAATTGGTGTATTTCCGAC+AGG | - | chr5.4:17969559-17969578 | MS.gene070108:CDS | 35.0% | |
| AACTGTACCCTAAAAATCCA+GGG | + | chr5.4:17969801-17969820 | None:intergenic | 35.0% | |
| ACATACCCTAATACTTGAAG+AGG | - | chr5.4:17968886-17968905 | MS.gene070108:CDS | 35.0% | |
| AGAAGCTCAGAGTAATCAAA+AGG | + | chr5.4:17968275-17968294 | None:intergenic | 35.0% | |
| ATACGAGCATCCATTATGAT+CGG | - | chr5.4:17970178-17970197 | MS.gene070108:intron | 35.0% | |
| CAAAATTCACTCATAAGGTG+AGG | - | chr5.4:17968645-17968664 | MS.gene070108:CDS | 35.0% | |
| CAATTATGACCACAACATCA+TGG | + | chr5.4:17968955-17968974 | None:intergenic | 35.0% | |
| CATACCCTAATACTTGAAGA+GGG | - | chr5.4:17968887-17968906 | MS.gene070108:CDS | 35.0% | |
| CATCCCAATGATTATATCAC+AGG | - | chr5.4:17969848-17969867 | MS.gene070108:intron | 35.0% | |
| CATTGAAAACCATGATGTTG+TGG | - | chr5.4:17968943-17968962 | MS.gene070108:CDS | 35.0% | |
| CTACCGTTGACATTGAAATA+TGG | + | chr5.4:17970718-17970737 | None:intergenic | 35.0% | |
| GAAATATATAGGACCTGGTA+CGG | + | chr5.4:17969774-17969793 | None:intergenic | 35.0% | |
| GAACTGAAATATATAGGACC+TGG | + | chr5.4:17969779-17969798 | None:intergenic | 35.0% | |
| GCTTATTTAAGCTTACCTAG+TGG | + | chr5.4:17968858-17968877 | None:intergenic | 35.0% | |
| GGATAATCTTGATCCATTCA+AGG | + | chr5.4:17971075-17971094 | None:intergenic | 35.0% | |
| GGTGATATCTAGACTCTATT+TGG | - | chr5.4:17971325-17971344 | MS.gene070108:CDS | 35.0% | |
| GTTGACATTGAAATATGGGT+AGG | + | chr5.4:17970713-17970732 | None:intergenic | 35.0% | |
| TAATACACAGTTTCCATGGA+AGG | + | chr5.4:17971144-17971163 | None:intergenic | 35.0% | |
| TAATACCGTTGAAGATGAGA+TGG | + | chr5.4:17968010-17968029 | None:intergenic | 35.0% | |
| TAGTATACAATCTCGTCACA+CGG | + | chr5.4:17969398-17969417 | None:intergenic | 35.0% | |
| TCCAGGGAACTGAAATATAT+AGG | + | chr5.4:17969785-17969804 | None:intergenic | 35.0% | |
| TCCTATATATTTCAGTTCCC+TGG | - | chr5.4:17969781-17969800 | MS.gene070108:intron | 35.0% | |
| TCGTATCATATGCTATGAGT+AGG | + | chr5.4:17970164-17970183 | None:intergenic | 35.0% | |
| TTACAAGTGTTTATGCCACT+AGG | - | chr5.4:17968840-17968859 | MS.gene070108:CDS | 35.0% | |
| TTACGAATCACGGAAAACAA+TGG | - | chr5.4:17970289-17970308 | MS.gene070108:intron | 35.0% | |
| ! | AAGTAGTGTACCGATCATAA+TGG | + | chr5.4:17970191-17970210 | None:intergenic | 35.0% |
| ! | ACAAGATTTTCTCCTCAGTT+TGG | + | chr5.4:17969687-17969706 | None:intergenic | 35.0% |
| ! | CATGTAATAGAGCACTACAA+TGG | - | chr5.4:17969007-17969026 | MS.gene070108:intron | 35.0% |
| ! | CGGAAACTGATCATTTTCAA+TGG | - | chr5.4:17970869-17970888 | MS.gene070108:intron | 35.0% |
| ! | CTCACCTTATGAGTGAATTT+TGG | + | chr5.4:17968647-17968666 | None:intergenic | 35.0% |
| ! | TGTAATAGAGCACTACAATG+GGG | - | chr5.4:17969009-17969028 | MS.gene070108:intron | 35.0% |
| ! | TTCAGTTCCCTGGATTTTTA+GGG | - | chr5.4:17969791-17969810 | MS.gene070108:intron | 35.0% |
| ! | TTTCAGTTCCCTGGATTTTT+AGG | - | chr5.4:17969790-17969809 | MS.gene070108:intron | 35.0% |
| !! | AATGGTGGGTTTATCAGAAT+TGG | - | chr5.4:17968140-17968159 | MS.gene070108:intron | 35.0% |
| !! | AGTTTCTGGTTGATGATTAC+TGG | - | chr5.4:17970781-17970800 | MS.gene070108:intron | 35.0% |
| !! | ATTTTATGTAGGTGCTATCC+AGG | - | chr5.4:17971413-17971432 | MS.gene070108:intron | 35.0% |
| !! | TTTGGTGGTGATTAAGAATG+AGG | - | chr5.4:17970979-17970998 | MS.gene070108:intron | 35.0% |
| !! | TTTTGATTACTCTGAGCTTC+TGG | - | chr5.4:17968274-17968293 | MS.gene070108:intron | 35.0% |
| !!! | GGAAGTTGATTTTGGTTAGA+AGG | - | chr5.4:17970097-17970116 | MS.gene070108:intron | 35.0% |
| !!! | TTTGTCTAGTTTTGGAGAGA+TGG | - | chr5.4:17970441-17970460 | MS.gene070108:intron | 35.0% |
| AAAAATGTCGGACAGAGTGA+AGG | - | chr5.4:17970663-17970682 | MS.gene070108:intron | 40.0% | |
| AAACAATGGACGGAAGTTTC+TGG | - | chr5.4:17970767-17970786 | MS.gene070108:intron | 40.0% | |
| AAATCGACCGTATCAGATCT+GGG | - | chr5.4:17970894-17970913 | MS.gene070108:intron | 40.0% | |
| AAGTTACACACTCCAAACTG+AGG | - | chr5.4:17969672-17969691 | MS.gene070108:intron | 40.0% | |
| ACGAATCAATTGCATGCTTC+CGG | + | chr5.4:17969900-17969919 | None:intergenic | 40.0% | |
| AGTTTCCATGGAAGGTAGAA+AGG | + | chr5.4:17971136-17971155 | None:intergenic | 40.0% | |
| ATATGTCTGTCTACATCAGC+AGG | - | chr5.4:17971472-17971491 | MS.gene070108:intron | 40.0% | |
| CAACTGTACCCTAAAAATCC+AGG | + | chr5.4:17969802-17969821 | None:intergenic | 40.0% | |
| CTCTTCCATCTCATCTTCAA+CGG | - | chr5.4:17968002-17968021 | MS.gene070108:CDS | 40.0% | |
| CTTAAAAGAAGCTCCACTGA+AGG | + | chr5.4:17970587-17970606 | None:intergenic | 40.0% | |
| GAGGGTGGAATTTATAGTTG+CGG | - | chr5.4:17968905-17968924 | MS.gene070108:CDS | 40.0% | |
| GATTCTCAAGGTTCTCAAGT+TGG | - | chr5.4:17968100-17968119 | MS.gene070108:intron | 40.0% | |
| GCGTTGTCAATTACGAATCA+CGG | - | chr5.4:17970279-17970298 | MS.gene070108:intron | 40.0% | |
| GTGCACATGATAGAAAACCA+AGG | + | chr5.4:17969515-17969534 | None:intergenic | 40.0% | |
| GTGGGTTTATCAGAATTGGA+GGG | - | chr5.4:17968144-17968163 | MS.gene070108:intron | 40.0% | |
| GTTGAAGATGAGATGGAAGA+GGG | + | chr5.4:17968003-17968022 | None:intergenic | 40.0% | |
| TCCACCCTCTTCAAGTATTA+GGG | + | chr5.4:17968894-17968913 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTTATTG+TGG | + | chr5.4:17968800-17968819 | None:intergenic | 40.0% | |
| TTCCACCCTCTTCAAGTATT+AGG | + | chr5.4:17968895-17968914 | None:intergenic | 40.0% | |
| ! | AAGTCGACTTCATTAGCTTC+TGG | + | chr5.4:17970550-17970569 | None:intergenic | 40.0% |
| ! | ACTGGGAGCATAAAGAAGAA+TGG | + | chr5.4:17969991-17970010 | None:intergenic | 40.0% |
| ! | AGTCGACTTTGCAAGACAAT+CGG | - | chr5.4:17970561-17970580 | MS.gene070108:intron | 40.0% |
| ! | CGTGATTTTCTCTGCAGAAA+TGG | + | chr5.4:17969939-17969958 | None:intergenic | 40.0% |
| ! | GCGATAGAGGAATACTTTTC+AGG | - | chr5.4:17971184-17971203 | MS.gene070108:intron | 40.0% |
| ! | GTAATAGAGCACTACAATGG+GGG | - | chr5.4:17969010-17969029 | MS.gene070108:intron | 40.0% |
| ! | TATATCACAGGTGATGGTGA+AGG | - | chr5.4:17969860-17969879 | MS.gene070108:intron | 40.0% |
| ! | TTCTTTTACCCAAAGCTTGC+TGG | - | chr5.4:17971099-17971118 | MS.gene070108:intron | 40.0% |
| ! | TTTTCTCTGCAGAAATGGAG+AGG | + | chr5.4:17969934-17969953 | None:intergenic | 40.0% |
| !! | ATGGAAGAGGGTGTTATTAC+AGG | + | chr5.4:17967991-17968010 | None:intergenic | 40.0% |
| !! | CAGTGGAGCTTCTTTTAAGT+TGG | - | chr5.4:17970588-17970607 | MS.gene070108:intron | 40.0% |
| !! | GCAAGCTTTGGGTAAAAGAA+CGG | + | chr5.4:17971099-17971118 | None:intergenic | 40.0% |
| !! | TGTTCTTCTGTTTCTGCTAC+TGG | - | chr5.4:17968212-17968231 | MS.gene070108:intron | 40.0% |
| AAGCTGTCGTGAACACTGAA+CGG | - | chr5.4:17970849-17970868 | MS.gene070108:intron | 45.0% | |
| AATTTCAAGGGTCGCGATAG+AGG | - | chr5.4:17971171-17971190 | MS.gene070108:intron | 45.0% | |
| ACCCTAATACTTGAAGAGGG+TGG | - | chr5.4:17968890-17968909 | MS.gene070108:CDS | 45.0% | |
| AGGGATTACTGCTCCTTCAA+TGG | - | chr5.4:17968163-17968182 | MS.gene070108:intron | 45.0% | |
| ATTCTTCTCAGGACCTTCCA+GGG | + | chr5.4:17971440-17971459 | None:intergenic | 45.0% | |
| CGTTGAAGATGAGATGGAAG+AGG | + | chr5.4:17968004-17968023 | None:intergenic | 45.0% | |
| GAAATCGACCGTATCAGATC+TGG | - | chr5.4:17970893-17970912 | MS.gene070108:intron | 45.0% | |
| GAAGGTGGAATAGAGATGAC+CGG | - | chr5.4:17969878-17969897 | MS.gene070108:intron | 45.0% | |
| GAAGTCCTTTCTACCTTCCA+TGG | - | chr5.4:17971128-17971147 | MS.gene070108:intron | 45.0% | |
| GGATACACCCAGATCTGATA+CGG | + | chr5.4:17970904-17970923 | None:intergenic | 45.0% | |
| TACTACTCCCCATTCTTCTC+AGG | + | chr5.4:17971451-17971470 | None:intergenic | 45.0% | |
| TCGTAAGTCCAGCAAGCTTT+GGG | + | chr5.4:17971110-17971129 | None:intergenic | 45.0% | |
| TGGAAGGTCCTGAGAAGAAT+GGG | - | chr5.4:17971440-17971459 | MS.gene070108:intron | 45.0% | |
| TTCGTAAGTCCAGCAAGCTT+TGG | + | chr5.4:17971111-17971130 | None:intergenic | 45.0% | |
| ! | AGGGCAACTTCTTTGAGAGA+TGG | + | chr5.4:17971506-17971525 | None:intergenic | 45.0% |
| ! | GACTCTTCGAAAGAGCATGT+TGG | + | chr5.4:17968820-17968839 | None:intergenic | 45.0% |
| ! | GGTGGGTTTATCAGAATTGG+AGG | - | chr5.4:17968143-17968162 | MS.gene070108:intron | 45.0% |
| !! | AGCTTTGGGTAAAAGAACGG+TGG | + | chr5.4:17971096-17971115 | None:intergenic | 45.0% |
| !! | TCTGTTTCTGCTACTGGTGA+TGG | - | chr5.4:17968218-17968237 | MS.gene070108:intron | 45.0% |
| !! | TTGCCTTGTGTTGGCTTTGA+GGG | + | chr5.4:17968734-17968753 | None:intergenic | 45.0% |
| AAAGGCAACACAAGGCCTAG+GGG | - | chr5.4:17968770-17968789 | MS.gene070108:intron | 50.0% | |
| CAAAGGCAACACAAGGCCTA+GGG | - | chr5.4:17968769-17968788 | MS.gene070108:intron | 50.0% | |
| CATTCTTCTCAGGACCTTCC+AGG | + | chr5.4:17971441-17971460 | None:intergenic | 50.0% | |
| CTGGAAGGTCCTGAGAAGAA+TGG | - | chr5.4:17971439-17971458 | MS.gene070108:intron | 50.0% | |
| GAAAAGCCTTGATGTCGCAG+CGG | - | chr5.4:17969469-17969488 | MS.gene070108:intron | 50.0% | |
| GAGATTGAGTTTCCCACAGC+TGG | - | chr5.4:17969740-17969759 | MS.gene070108:intron | 50.0% | |
| GGAAGGTCCTGAGAAGAATG+GGG | - | chr5.4:17971441-17971460 | MS.gene070108:intron | 50.0% | |
| GGCTAGAGTTGCAGTGGAAT+TGG | - | chr5.4:17969580-17969599 | MS.gene070108:CDS | 50.0% | |
| GGTACACTACTTGCTCATCG+AGG | - | chr5.4:17970199-17970218 | MS.gene070108:intron | 50.0% | |
| TCAAAGGCAACACAAGGCCT+AGG | - | chr5.4:17968768-17968787 | MS.gene070108:intron | 50.0% | |
| ! | AGAGCACTACAATGGGGGTT+TGG | - | chr5.4:17969015-17969034 | MS.gene070108:intron | 50.0% |
| ! | AGGCCTTGTGTTGCCTTTGA+GGG | + | chr5.4:17968768-17968787 | None:intergenic | 50.0% |
| ! | ATCACAGGTGATGGTGAAGG+TGG | - | chr5.4:17969863-17969882 | MS.gene070108:intron | 50.0% |
| ! | TAGGCCTTGTGTTGCCTTTG+AGG | + | chr5.4:17968769-17968788 | None:intergenic | 50.0% |
| !! | GTTGCCTTGTGTTGGCTTTG+AGG | + | chr5.4:17968735-17968754 | None:intergenic | 50.0% |
| !! | TGCCTTGTGTTGGCTTTGAG+GGG | + | chr5.4:17968733-17968752 | None:intergenic | 50.0% |
| ACGGATTCGAGTCCAGCTGT+GGG | + | chr5.4:17969755-17969774 | None:intergenic | 55.0% | |
| CACCCCTCAAAGCCAACACA+AGG | - | chr5.4:17968728-17968747 | MS.gene070108:intron | 55.0% | |
| CCACTGCAACTCTAGCCTGT+CGG | + | chr5.4:17969577-17969596 | None:intergenic | 55.0% | |
| CTAGGGGCGGACCACAATAA+AGG | - | chr5.4:17968786-17968805 | MS.gene070108:intron | 55.0% | |
| CTTTATTGTGGTCCGCCCCT+AGG | + | chr5.4:17968788-17968807 | None:intergenic | 55.0% | |
| GCAAGACAATCGGCCTTCAG+TGG | - | chr5.4:17970571-17970590 | MS.gene070108:intron | 55.0% | |
| TACGGATTCGAGTCCAGCTG+TGG | + | chr5.4:17969756-17969775 | None:intergenic | 55.0% | |
| ! | CTTGTGTTGCCTTTGAGGGG+CGG | + | chr5.4:17968764-17968783 | None:intergenic | 55.0% |
| ! | GGACTTGGGTTGCCTTGTGT+TGG | + | chr5.4:17968743-17968762 | None:intergenic | 55.0% |
| ! | GGCCTTGTGTTGCCTTTGAG+GGG | + | chr5.4:17968767-17968786 | None:intergenic | 55.0% |
| !! | CTTGTGTTGGCTTTGAGGGG+TGG | + | chr5.4:17968730-17968749 | None:intergenic | 55.0% |
| AACCCAAGTCCGCCCCTCAA+AGG | - | chr5.4:17968752-17968771 | MS.gene070108:intron | 60.0% | |
| CCGACAGGCTAGAGTTGCAG+TGG | - | chr5.4:17969574-17969593 | MS.gene070108:CDS | 60.0% | |
| CGCCCCTCAAAGGCAACACA+AGG | - | chr5.4:17968762-17968781 | MS.gene070108:intron | 60.0% | |
| GCTGGACTCGAATCCGTACC+AGG | - | chr5.4:17969758-17969777 | MS.gene070108:CDS | 60.0% | |
| GGGGCGGACCACAATAAAGG+CGG | - | chr5.4:17968789-17968808 | MS.gene070108:CDS | 60.0% | |
| GTCGGACAGAGTGAAGGCAG+AGG | - | chr5.4:17970669-17970688 | MS.gene070108:intron | 60.0% | |
| GTGCTATCCAGGACCCTGGA+AGG | - | chr5.4:17971424-17971443 | MS.gene070108:intron | 60.0% | |
| TCGCAACCGCTGCGACATCA+AGG | + | chr5.4:17969478-17969497 | None:intergenic | 60.0% | |
| ! | GTAGGTGCTATCCAGGACCC+TGG | - | chr5.4:17971420-17971439 | MS.gene070108:intron | 60.0% |
| ! | TGCCTTTGAGGGGCGGACTT+GGG | + | chr5.4:17968757-17968776 | None:intergenic | 60.0% |
| ! | TTGCCTTTGAGGGGCGGACT+TGG | + | chr5.4:17968758-17968777 | None:intergenic | 60.0% |
| CTCAGGACCTTCCAGGGTCC+TGG | + | chr5.4:17971434-17971453 | None:intergenic | 65.0% | |
| GGCAACACAAGGCCTAGGGG+CGG | - | chr5.4:17968773-17968792 | MS.gene070108:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 17967973 | 17971547 | 17967973 | ID=MS.gene070108 |
| chr5.4 | mRNA | 17967973 | 17971547 | 17967973 | ID=MS.gene070108.t1;Parent=MS.gene070108 |
| chr5.4 | exon | 17971497 | 17971547 | 17971497 | ID=MS.gene070108.t1.exon1;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17971497 | 17971547 | 17971497 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17971219 | 17971410 | 17971219 | ID=MS.gene070108.t1.exon2;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17971219 | 17971410 | 17971219 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17969892 | 17969939 | 17969892 | ID=MS.gene070108.t1.exon3;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17969892 | 17969939 | 17969892 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17969741 | 17969780 | 17969741 | ID=MS.gene070108.t1.exon4;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17969741 | 17969780 | 17969741 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17969550 | 17969650 | 17969550 | ID=MS.gene070108.t1.exon5;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17969550 | 17969650 | 17969550 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17968787 | 17968979 | 17968787 | ID=MS.gene070108.t1.exon6;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17968787 | 17968979 | 17968787 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17968603 | 17968701 | 17968603 | ID=MS.gene070108.t1.exon7;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17968603 | 17968701 | 17968603 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17968315 | 17968432 | 17968315 | ID=MS.gene070108.t1.exon8;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17968315 | 17968432 | 17968315 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| chr5.4 | exon | 17967973 | 17968096 | 17967973 | ID=MS.gene070108.t1.exon9;Parent=MS.gene070108.t1 |
| chr5.4 | CDS | 17967973 | 17968096 | 17967973 | ID=cds.MS.gene070108.t1;Parent=MS.gene070108.t1 |
| Gene Sequence |
| Protein sequence |
